Jatropha Genome Database

JcCB0031431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0031431.10 - phase: 0 
         (117 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23805.1 | Symbols: RALFL24 | RALFL24 (ralf-like 24); signal ...   109   5e-25
AT4G13950.1 | Symbols: RALFL31 | RALFL31 (ralf-like 31); signal ...   104   1e-23
AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | RALF1 (RAPID ALK...    86   4e-18
AT4G15800.1 | Symbols: RALFL33 | RALFL33 (ralf-like 33); signal ...    85   8e-18
AT3G05490.1 | Symbols: RALFL22 | RALFL22 (ralf-like 22); signal ...    81   2e-16
AT3G16570.1 | Symbols: RALFL23 | RALFL23 (ralf-like 23); signal ...    75   7e-15
AT2G33775.1 | Symbols: RALFL19 | RALFL19 (ralf-like 19); signal ...    68   1e-12
AT1G28270.1 | Symbols: RALFL4 | RALFL4 (ralf-like 4); signal tra...    65   9e-12
AT5G67070.1 | Symbols: RALFL34 | RALFL34 (ralf-like 34); signal ...    45   1e-05

>AT3G23805.1 | Symbols: RALFL24 | RALFL24 (ralf-like 24); signal
           transducer | chr3:8586467-8586823 FORWARD
          Length = 118

 Score =  109 bits (272), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/115 (55%), Positives = 80/115 (69%), Gaps = 7/115 (6%)

Query: 1   MSRP-KLYILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEEAEME 59
           MSR   L  L+L+ L TH SI   V +  +N     EIDA+++R     IG+   E  M 
Sbjct: 1   MSRSLALVYLSLLCLQTHLSISVTVPIPSVNG----EIDAMLNRNGV--IGEEEGEEMMP 54

Query: 60  SEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 114
           SEISRRV++M+K+YISYETL+RDMVPC KPGASYY C +G+AN Y+RGC VITRC
Sbjct: 55  SEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRC 109


>AT4G13950.1 | Symbols: RALFL31 | RALFL31 (ralf-like 31); signal
           transducer | chr4:8058268-8058609 REVERSE
          Length = 113

 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 72/109 (66%), Gaps = 11/109 (10%)

Query: 6   LYILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCLEEAEMESEISRR 65
           L I A++FL          S +G       EIDA++ R     IG+  +E  M +EISRR
Sbjct: 7   LVIFAILFLLISADAFPIPSPNG-------EIDAMLIR--NSIIGE--DEDLMPTEISRR 55

Query: 66  VLLMQKKYISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 114
           VL+ QK+YI YETL+RDMVPC KPGASYYDC +G+AN YSRGC+ ITRC
Sbjct: 56  VLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYSRGCDTITRC 104


>AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | RALF1 (RAPID
           ALKALINIZATION FACTOR 1); signal transducer |
           chr1:653976-654338 REVERSE
          Length = 120

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 4/74 (5%)

Query: 45  CTRKIGDCL--EEAEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAG-EA 101
           C   I +C+  EE EM+SEI+RR+L    KYISY++LKR+ VPC++ GASYY+C  G +A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILAT-TKYISYQSLKRNSVPCSRRGASYYNCQNGAQA 105

Query: 102 NPYSRGCEVITRCR 115
           NPYSRGC  I RCR
Sbjct: 106 NPYSRGCSKIARCR 119


>AT4G15800.1 | Symbols: RALFL33 | RALFL33 (ralf-like 33); signal
           transducer | chr4:8984915-8985265 FORWARD
          Length = 116

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 16/120 (13%)

Query: 2   SRPKLYILALIFLYTHFSICNGVSVSGLNSLEITEIDAIVSRPCTRKIGDCL-----EEA 56
           ++P   I+A++ ++  F+     +V+  +S +   I++     C   I +C      EE 
Sbjct: 6   TKPVAIIIAILTVHFLFA-----AVTSQSSGDFVPIES----KCNGTIAECSLSTAEEEF 56

Query: 57  EMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 115
           EM+SEI+RR+L    KYISY  L+R+ VPC++ GASYY+C  G +ANPYSRGC  ITRCR
Sbjct: 57  EMDSEINRRIL-ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115


>AT3G05490.1 | Symbols: RALFL22 | RALFL22 (ralf-like 22); signal
           transducer | chr3:1591381-1591740 FORWARD
          Length = 119

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 2/59 (3%)

Query: 58  MESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 115
            +S+ISRR+L  QKKYISY  ++R+ VPC++ GASYY+C  G +ANPYSRGC  ITRCR
Sbjct: 61  FDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118


>AT3G16570.1 | Symbols: RALFL23 | RALFL23 (ralf-like 23); signal
           transducer | chr3:5644748-5645164 FORWARD
          Length = 138

 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 46/58 (79%), Gaps = 2/58 (3%)

Query: 59  ESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 115
           +SEI+RR+L   ++YISY  L+R+ +PC++ GASYY+C  G +ANPYSRGC  ITRCR
Sbjct: 80  DSEINRRIL-ATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136


>AT2G33775.1 | Symbols: RALFL19 | RALFL19 (ralf-like 19); signal
           transducer | chr2:14288546-14288878 FORWARD
          Length = 110

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 33  EITEIDAIVSRPCTRKIGDCLEEAE----MESEISRRVLLMQKKYISYETLKRDMVPCAK 88
           E       +++ C    G   E+ E    M+SE +RR L  ++ YISY  L+++ VPC++
Sbjct: 19  ESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSR 78

Query: 89  PGASYYDCHAGE-ANPYSRGCEVITRC 114
            G SYYDC   + ANPY RGC VIT C
Sbjct: 79  RGRSYYDCKKRKRANPYRRGCSVITHC 105


>AT1G28270.1 | Symbols: RALFL4 | RALFL4 (ralf-like 4); signal
           transducer | chr1:9883165-9883497 FORWARD
          Length = 110

 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 55  EAEMESEISRRVLLMQKKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGCEVITR 113
           E+ M+SE +RR L   ++YI Y+ LK++ VPC++ G SYYDC      NPY RGC  IT 
Sbjct: 45  ESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITH 104

Query: 114 C 114
           C
Sbjct: 105 C 105


>AT5G67070.1 | Symbols: RALFL34 | RALFL34 (ralf-like 34); signal
           transducer | chr5:26768120-26768509 FORWARD
          Length = 129

 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 44/97 (45%), Gaps = 27/97 (27%)

Query: 26  VSGLNSLEITEIDAIVSRPCTRKIGDCLEEAEMESEISRRVLLMQ--KKYISYETLKRDM 83
           + G  S E+TE D  V+                     RR L  +  K YISY  L  + 
Sbjct: 52  IDGEESFEVTEEDDGVT--------------------DRRSLYWRRTKYYISYGALSANR 91

Query: 84  VPCA-KPGASYY--DCHA--GEANPYSRGCEVITRCR 115
           VPC  + G SYY  +C    G  +PYSRGC  ITRCR
Sbjct: 92  VPCPPRSGRSYYTHNCFRARGPVHPYSRGCSSITRCR 128