Jatropha Genome Database
- JcCB0030781.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0030781.10 - phase: 0 /partial
(268 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1); alpha... 396 e-111
AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha... 165 2e-41
AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put... 72 3e-13
AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase, put... 72 3e-13
>AT2G39930.1 | Symbols: ISA1, ATISA1 | ISA1 (ISOAMYLASE 1);
alpha-amylase/ isoamylase | chr2:16666078-16672183
FORWARD
Length = 783
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/258 (71%), Positives = 208/258 (80%)
Query: 7 EGGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASI 66
+GGRKPW+SINF+CAHDGFTLADLVTY CG EG+FASI
Sbjct: 522 QGGRKPWHSINFICAHDGFTLADLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASI 581
Query: 67 SVKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEES 126
SVK+LRKRQMRNFFV LMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY+NYFRWDKKEE+
Sbjct: 582 SVKRLRKRQMRNFFVSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYMNYFRWDKKEEA 641
Query: 127 SSDFYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDWSETSRFVAFTVTDTVK 186
SDF+RFC ++ KFR ECESLGLNDFPTA+RLQWHG P +P+WSETSRFVAF++ D+VK
Sbjct: 642 HSDFFRFCRILIKFRDECESLGLNDFPTAKRLQWHGLAPEIPNWSETSRFVAFSLVDSVK 701
Query: 187 GEIYVAFNAKHLPVTVALPERLGYRWEPLVDTGKASPFDFLSGDVPEREIAIKQYSHFLD 246
EIYVAFN HL V+LP R GYRWEP VDT K SP+D ++ D+PERE A+KQY HFLD
Sbjct: 702 KEIYVAFNTSHLATLVSLPNRPGYRWEPFVDTSKPSPYDCITPDLPERETAMKQYRHFLD 761
Query: 247 ANLYPMHSYSSIILTLSP 264
AN+YPM SYSSIIL LSP
Sbjct: 762 ANVYPMLSYSSIILLLSP 779
>AT4G09020.1 | Symbols: ATISA3, ISA3 | ISA3 (ISOAMYLASE 3);
alpha-amylase/ isoamylase | chr4:5784099-5788839 FORWARD
Length = 764
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 134/258 (51%), Gaps = 20/258 (7%)
Query: 6 QEGGRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFAS 65
Q RKP++ +NFV AHDGFTL DLV+Y CG EGE
Sbjct: 521 QVNQRKPYHGVNFVIAHDGFTLRDLVSYNFKHNEANGEGGNDGCNDNHSWNCGFEGETGD 580
Query: 66 ISVKKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEE 125
+K LR RQM+NF + LM+SQG PM+ MGDEYGHT+ GNNN+Y HD +N F+W + +
Sbjct: 581 AHIKSLRTRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTSLNNFQWKELDA 640
Query: 126 SSSDFYRFCCLMTKFRSECESLGLNDFPTAERLQWHGHVPRMPDWSET-SRFVAFTVTDT 184
+ +RF + KFR L +F T + WH +W + S+F+AFT+ D
Sbjct: 641 KKQNHFRFFSEVIKFRHSHHVLKHENFLTQGEITWH-----EDNWDNSESKFLAFTLHDG 695
Query: 185 VKG-EIYVAFNAKHLPVTVALPE-RLGYRWEPLVDTGKASPFDFLSGDVPEREIAIKQYS 242
+ G +IYVAFNA V +P+ G +W + DT SP DF+ V
Sbjct: 696 IGGRDIYVAFNAHDYFVKALIPQPPPGKQWFRVADTNLESPDDFVREGVAGV-------- 747
Query: 243 HFLDANLYPMHSYSSIIL 260
A+ Y + +SSI+L
Sbjct: 748 ----ADTYNVAPFSSILL 761
>AT1G03310.1 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
putative / starch debranching enzyme, putative |
chr1:813975-816623 FORWARD
Length = 882
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 41/272 (15%)
Query: 9 GRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASISV 68
GR P S N++ + G +L D+V++ CG EG +V
Sbjct: 625 GRGPAFSFNYISRNSGLSLVDIVSFSGPELASELSWN-----------CGEEGATNKSAV 673
Query: 69 KKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEES-S 127
+ R +Q+RNF +S GVP++ MGDE G + G+ F W+ +
Sbjct: 674 LQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLLESRKP----FDWNLLASAFG 729
Query: 128 SDFYRFCCLMTKFRS-ECESLGLNDFPTAERLQWHGHVPRMPDWSE-TSRFVAFTV---- 181
+ +F MT R+ + DF E + W+ + P W + S+F+A +
Sbjct: 730 TQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWEDPASKFLALEIKSES 789
Query: 182 -----------TDTVKGEIYVAFNAKHLPVTVALPERL-GYRWEPLVDTGKASP-FDFLS 228
+ ++++ FNA P +V LP G +W LVDT P F +
Sbjct: 790 EEEETASLAEPNEPKSNDLFIGFNASDHPESVVLPSLPDGSKWRRLVDTALPFPGFFSVE 849
Query: 229 GDVPEREIAIKQYSHFLDANLYPMHSYSSIIL 260
G+ E ++Q +Y M YS +
Sbjct: 850 GETVVAEEPLQQLV------VYEMKPYSCTLF 875
>AT1G03310.2 | Symbols: ATISA2, ISA2, DBE1, BE2 | isoamylase,
putative / starch debranching enzyme, putative |
chr1:813975-816623 FORWARD
Length = 882
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 41/272 (15%)
Query: 9 GRKPWNSINFVCAHDGFTLADLVTYXXXXXXXXXXXXXXXXXXXXXXXCGLEGEFASISV 68
GR P S N++ + G +L D+V++ CG EG +V
Sbjct: 625 GRGPAFSFNYISRNSGLSLVDIVSFSGPELASELSWN-----------CGEEGATNKSAV 673
Query: 69 KKLRKRQMRNFFVCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEES-S 127
+ R +Q+RNF +S GVP++ MGDE G + G+ F W+ +
Sbjct: 674 LQRRLKQIRNFLFIQYISLGVPVLNMGDECGISTRGSPLLESRKP----FDWNLLASAFG 729
Query: 128 SDFYRFCCLMTKFRS-ECESLGLNDFPTAERLQWHGHVPRMPDWSE-TSRFVAFTV---- 181
+ +F MT R+ + DF E + W+ + P W + S+F+A +
Sbjct: 730 TQITQFISFMTSVRARRSDVFQRRDFLKPENIVWYANDQTTPKWEDPASKFLALEIKSES 789
Query: 182 -----------TDTVKGEIYVAFNAKHLPVTVALPERL-GYRWEPLVDTGKASP-FDFLS 228
+ ++++ FNA P +V LP G +W LVDT P F +
Sbjct: 790 EEEETASLAEPNEPKSNDLFIGFNASDHPESVVLPSLPDGSKWRRLVDTALPFPGFFSVE 849
Query: 229 GDVPEREIAIKQYSHFLDANLYPMHSYSSIIL 260
G+ E ++Q +Y M YS +
Sbjct: 850 GETVVAEEPLQQLV------VYEMKPYSCTLF 875