Jatropha Genome Database
- JcCB0030731.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0030731.10 + phase: 0
(408 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 263 2e-70
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 207 1e-53
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 159 2e-39
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 139 3e-33
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 99 4e-21
AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGUL... 94 2e-19
AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGUL... 89 4e-18
AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 84 2e-16
AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 84 2e-16
AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULAT... 83 4e-16
AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); tr... 81 1e-15
AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGUL... 80 2e-15
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 72 9e-13
AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGUL... 71 1e-12
AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGU... 66 5e-11
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE ... 66 5e-11
AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); trans... 65 9e-11
AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE REGU... 65 1e-10
AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7); trans... 64 3e-10
AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONS... 63 4e-10
AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGUL... 63 4e-10
AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9)... 62 6e-10
AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15); tr... 62 6e-10
AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6); trans... 61 1e-09
AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3... 59 4e-09
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RES... 59 4e-09
AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE... 58 9e-09
AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE REGU... 52 6e-07
AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGUL... 51 1e-06
AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE... 50 3e-06
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 155/221 (70%), Gaps = 37/221 (16%)
Query: 53 VKWSKLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDL 112
VKW + P++ LRVLLVEADDSTRQIIAALLRKCSY+V AVPDGLKAWEML+G+P +DL
Sbjct: 148 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 207
Query: 113 ILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCM 172
ILTEVDLPSISGYALL+LI EH+ICKNIPVI+ MS+QD+ NTVYKCM
Sbjct: 208 ILTEVDLPSISGYALLTLIMEHDICKNIPVIM--------------MSTQDSVNTVYKCM 253
Query: 173 LRGAADYLVKPIRKNELRNLWQH------SLAEVDGLQDESVGQDKVEATSENNAASNHS 226
L+GAADYLVKP+R+NELRNLWQH SLA +ESVGQ K E S NN+
Sbjct: 254 LKGAADYLVKPLRRNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRD 313
Query: 227 ----SGNMACIQQNKEFIEKGSDAQSSCTKPDAEAESAHME 263
SGN G DAQSSCT+P+ E ESA +E
Sbjct: 314 DHVVSGN-------------GGDAQSSCTRPEMEGESADVE 341
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 115/153 (75%), Gaps = 14/153 (9%)
Query: 43 VNGSLRNGMAVKWSKLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEM 102
+ +++ V+W K P+ VLRVLLVE+D STRQII ALLRKC YKVVAV DGL AWE+
Sbjct: 16 IKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEV 75
Query: 103 LRGRPHKIDLILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQ 162
L+ + H IDLILTE+DLPSISG+ALL+L+ EHE CKNIPVI+ MSSQ
Sbjct: 76 LKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIM--------------MSSQ 121
Query: 163 DATNTVYKCMLRGAADYLVKPIRKNELRNLWQH 195
D+ V KCMLRGAADYL+KP+RKNEL+NLWQH
Sbjct: 122 DSIKMVLKCMLRGAADYLIKPMRKNELKNLWQH 154
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 125/226 (55%), Gaps = 27/226 (11%)
Query: 53 VKWSKLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDL 112
VKW + P L+VLLVE DDSTR I+ ALL+ CSY+V AVPD L+AW +L IDL
Sbjct: 53 VKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDL 112
Query: 113 ILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCM 172
+LTEVD+P SG LLS I H+ KNIPVI+ MSS D+ V+KC+
Sbjct: 113 VLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIM--------------MSSHDSMVLVFKCL 158
Query: 173 LRGAADYLVKPIRKNELRNLWQH---------SLAEVDGLQDESVGQDKVEATSENNAA- 222
GA D+LVKPIRKNEL+NLWQH G+ D+ + + SEN+A+
Sbjct: 159 SNGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASI 218
Query: 223 ---SNHSSGNMACIQQNKEFIEKGSDAQSSCTKPDAEAESAHMENK 265
+ SG+ + + GS QSS TK ++ +S N+
Sbjct: 219 SDEHRNESGSSGGLSNQDGGSDNGSGTQSSWTKRASDTKSTSPSNQ 264
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 93/150 (62%), Gaps = 14/150 (9%)
Query: 46 SLRNGMAVKWSKLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRG 105
S + V W + +RVLLVE DD TR I+ ALLR CSY+VV +G++AW++L
Sbjct: 60 SQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLED 119
Query: 106 RPHKIDLILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDAT 165
+ ID++LTEV +P +SG LL I H+ +NIPVI+ MSS D+
Sbjct: 120 LNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIM--------------MSSHDSM 165
Query: 166 NTVYKCMLRGAADYLVKPIRKNELRNLWQH 195
V+KC+ +GA D+LVKPIRKNEL+ LWQH
Sbjct: 166 GLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 61 RMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLP 120
R +R+LL + D ++ + LL +CSY+V AV + + L ID+IL E+DLP
Sbjct: 16 RSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLP 75
Query: 121 SISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYL 180
G +L IT + + IPVI+ MS QD V KC+ GAADYL
Sbjct: 76 MAKGMKMLRYITRDKDLRRIPVIM--------------MSRQDEVPVVVKCLKLGAADYL 121
Query: 181 VKPIRKNELRNLWQH 195
VKP+R NEL NLW H
Sbjct: 122 VKPLRTNELLNLWTH 136
>AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component
response regulator | chr2:10724490-10726961 REVERSE
Length = 596
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 27/175 (15%)
Query: 59 FPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVD 118
FP + +RVL V+ D + +I+ +LLR C Y V KA E+LR +K DL++++VD
Sbjct: 13 FP-VGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVD 71
Query: 119 LPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAAD 178
+P + G+ LL L+ + ++PVI++S + V K + GA D
Sbjct: 72 MPDMDGFKLLELVG---LEMDLPVIMLSAHSDPKY--------------VMKGVTHGACD 114
Query: 179 YLVKPIRKNELRNLWQHSL---------AEVDGLQDESVGQDKVEATSENNAASN 224
YL+KP+R EL+N+WQH + + +G + + G + V + +NN N
Sbjct: 115 YLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDQNNGKGN 169
>AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component
response regulator | chr4:15444290-15446766 REVERSE
Length = 552
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 18/137 (13%)
Query: 59 FPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVD 118
FP + +RVL V+ D + +I+ LL++C Y V A E+LR +K DL++++VD
Sbjct: 13 FP-VGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVD 71
Query: 119 LPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAAD 178
+P + G+ LL L+ + ++PVI++S + V K + GA D
Sbjct: 72 MPDMDGFKLLELVG---LEMDLPVIMLSAHSDPKY--------------VMKGVKHGACD 114
Query: 179 YLVKPIRKNELRNLWQH 195
YL+KP+R EL+N+WQH
Sbjct: 115 YLLKPVRIEELKNIWQH 131
>AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5759139 FORWARD
Length = 690
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 57 KLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTE 116
++FP LRVL+V+ D + I+ +LR C Y+V A +LR H D+++++
Sbjct: 31 EMFPSG-LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 117 VDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGA 176
V +P + G+ LL + + ++PVI+ MS+ D+ + V K + GA
Sbjct: 90 VHMPDMDGFKLLEHVG---LEMDLPVIM--------------MSADDSKSVVLKGVTHGA 132
Query: 177 ADYLVKPIRKNELRNLWQH 195
DYL+KP+R L+N+WQH
Sbjct: 133 VDYLIKPVRMEALKNIWQH 151
>AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5758853 FORWARD
Length = 669
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 57 KLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTE 116
++FP LRVL+V+ D + I+ +LR C Y+V A +LR H D+++++
Sbjct: 31 EMFPSG-LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISD 89
Query: 117 VDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGA 176
V +P + G+ LL + + ++PVI+ MS+ D+ + V K + GA
Sbjct: 90 VHMPDMDGFKLLEHVG---LEMDLPVIM--------------MSADDSKSVVLKGVTHGA 132
Query: 177 ADYLVKPIRKNELRNLWQH 195
DYL+KP+R L+N+WQH
Sbjct: 133 VDYLIKPVRMEALKNIWQH 151
>AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR
2); transcription factor/ two-component response
regulator | chr4:9112979-9115785 FORWARD
Length = 664
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 34/207 (16%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSIS 123
LRVL+V+ D + I+ +L C Y+V A +LR + D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 124 GYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKP 183
G+ LL + + ++PVI+ MS+ D+ + V K + GA DYL+KP
Sbjct: 88 GFKLLEHVG---LEMDLPVIM--------------MSADDSKSVVLKGVTHGAVDYLIKP 130
Query: 184 IRKNELRNLWQH---------SLAEVDGLQDESVGQDK------VEATSENNAASNHSSG 228
+R L+N+WQH +++E G E G D+ E N+++ N +G
Sbjct: 131 VRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGNG 190
Query: 229 NMACIQQNKEFIEKGSDAQ--SSCTKP 253
+ ++ +E ++G D + SS KP
Sbjct: 191 RSSRKRKEEEVDDQGDDKEDSSSLKKP 217
>AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 521
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Query: 59 FPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVD 118
F + LRVL+V+ D + +I+ +L+KCSY+V +A +LR R D+++++V+
Sbjct: 6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVN 65
Query: 119 LPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAAD 178
+P + G+ LL + + ++PVI+ MS T+ V K + GA D
Sbjct: 66 MPDMDGFKLLEHVG---LELDLPVIM--------------MSVDGETSRVMKGVQHGACD 108
Query: 179 YLVKPIRKNELRNLWQHSL 197
YL+KPIR EL+ +WQH L
Sbjct: 109 YLLKPIRMKELKIIWQHVL 127
>AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component
response regulator | chr2:333041-334514 FORWARD
Length = 382
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSIS 123
LR+L+V+ D S I+ +L + Y+V A +LR R DL+L++V +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 124 GYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKP 183
GY LL + E+ ++PVI+ MS T TV + GA DYL+KP
Sbjct: 71 GYNLLQQVGLLEM--DLPVIM--------------MSVDGRTTTVMTGINHGACDYLIKP 114
Query: 184 IRKNELRNLWQH 195
IR EL+N+WQH
Sbjct: 115 IRPEELKNIWQH 126
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19233422-19234901 FORWARD
Length = 351
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 159 MSSQDATNTVYKCMLRGAADYLVKPIRKNELRNLWQH 195
MSSQD+ V KCMLRGAADYL+KP+RKNEL+NLWQH
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQH 37
>AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component
response regulator | chr5:23501785-23504099 REVERSE
Length = 618
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 18/132 (13%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSIS 123
+RVL V+ + + + + LL +C Y V + KA EMLR + DL++++V++P
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 124 GYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKP 183
G+ LL + E + +PVI+ +S+ ++V K ++ GA DYLVKP
Sbjct: 61 GFKLLEIGLEMD----LPVIM--------------LSAHSDYDSVMKGIIHGACDYLVKP 102
Query: 184 IRKNELRNLWQH 195
+ EL+N+W H
Sbjct: 103 VGLKELQNIWHH 114
>AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE
REGULATOR 4); transcription factor/ two-component
response regulator | chr5:19962934-19964351 FORWARD
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 44 NGSLRN--GMAVKWSKLFPRMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWE 101
+G RN +S FP LRVL+ + D S I+ L+K Y+V + KA
Sbjct: 21 DGPFRNLTNFYDMFSSNFPEG-LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMH 79
Query: 102 MLRGRPHKIDLILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSS 161
LR ++ DL + +V+ + LS I ++P+II+S+
Sbjct: 80 TLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSE---MDLPIIIISE-------------- 122
Query: 162 QDATNTVYKCMLRGAADYLVKPIRKNELRNLWQHSLAEVDGLQDESVGQDKVEATSENNA 221
D+ +V K M+ GAADYL+KPIR +LR +++H + ++ + G+ +E A
Sbjct: 123 DDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKMRERRSVVTGE------AEKAA 176
Query: 222 ASNHSSGNMACIQQNKEFIEKGSDAQSSCTKPDAEAESAHMENKR 266
SS + I+ +SSC + + E H N R
Sbjct: 177 GEKSSSVGDSTIRN------PNKSKRSSCLEAEVNEEDRHDHNDR 215
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/
two-component response regulator | chr1:3442624-3443759
REVERSE
Length = 259
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 27/145 (18%)
Query: 68 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPH----------KIDLILT 115
++ DDS R +I LLR S KV AV G +A E L G + K+DLI+T
Sbjct: 36 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFL-GLDNEKASAEFDRLKVDLIIT 94
Query: 116 EVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRG 175
+ +P ++GY LL I E + +PV+I MSS++ + +C+ G
Sbjct: 95 DYCMPGMTGYELLKKIKESSNFREVPVVI--------------MSSENVLTRIDRCLEEG 140
Query: 176 AADYLVKPIRKNELRNLWQHSLAEV 200
A D+L+KP++ +++ L H +V
Sbjct: 141 AQDFLLKPVKLADVKRLRSHLTKDV 165
>AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr1:22065894-22066895 REVERSE
Length = 231
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 25/139 (17%)
Query: 68 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWEML---------RGRPHKIDLILTE 116
++ DDS R +I LLR S KV AV G +A E L K+DLI+T+
Sbjct: 35 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITD 94
Query: 117 VDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGA 176
+P ++GY LL I E K +PV+I MSS++ + +C+ GA
Sbjct: 95 YCMPGMTGYELLKKIKESTSFKEVPVVI--------------MSSENVMTRIDRCLEEGA 140
Query: 177 ADYLVKPIRKNELRNLWQH 195
D+L+KP++ +++ L +
Sbjct: 141 EDFLLKPVKLADVKRLRSY 159
>AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE
REGULATOR 8); transcription regulator/ two-component
response regulator | chr4:327236-329048 REVERSE
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 66 VLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSISGY 125
VLL+++D + ++ ++RKC YKVVA ++ + KIDL+L E L ++ Y
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75
Query: 126 ALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKPIR 185
LL I IC+ IPV++ S + + +C+ RGA L KP+
Sbjct: 76 ELLEKI--RSICE-IPVVV---------------SGAHVKDAIVECLCRGAKLCLEKPLM 117
Query: 186 KNELRNLWQHSLA 198
+N+ + LWQ +++
Sbjct: 118 ENDFKILWQFTVS 130
>AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7);
transcription regulator/ two-component response
regulator | chr1:6577919-6579078 REVERSE
Length = 206
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 23/140 (16%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEML-----RG----RPHKIDLIL 114
L VL V+ R++I LLR S KV V G +A + L +G + K++LI+
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83
Query: 115 TEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLR 174
T+ +P +SGY LL I E + +PV+I MSS++ + +C+
Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVI--------------MSSENILPRIQECLKE 129
Query: 175 GAADYLVKPIRKNELRNLWQ 194
GA ++L+KP++ +++ + Q
Sbjct: 130 GAEEFLLKPVKLADVKRIKQ 149
>AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE
REGULATOR 20); transcription factor/ two-component
response regulator | chr3:23176556-23178294 REVERSE
Length = 426
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 65 RVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSISG 124
RVLLV AD ++ + L+ + SY+V G +A L H+IDL++ + +P I+G
Sbjct: 42 RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 125 YALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKPI 184
L++I + ++PV+I MS + TV + + GA D+LVKP+
Sbjct: 100 LDALNIIGKQ---MDLPVVI--------------MSHEYKKETVMESIKYGACDFLVKPV 142
Query: 185 RKNELRNLWQH 195
K + LW+H
Sbjct: 143 SKEVIAVLWRH 153
>AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE
REGULATOR 19); transcription factor/ two-component
response regulator | chr1:18191342-18193598 FORWARD
Length = 608
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 66 VLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSISGY 125
VL+V+ + +T + ++++ +Y+V D KA L H+I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 126 ALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKPIR 185
L IT ++PV+I MS + T +V K GA DY+VKP++
Sbjct: 96 QALKSITSK---LDLPVVI--------------MSDDNQTESVMKATFYGACDYVVKPVK 138
Query: 186 KNELRNLWQH 195
+ + N+WQH
Sbjct: 139 EEVMANIWQH 148
>AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9);
transcription regulator/ two-component response
regulator | chr3:21110059-21111228 FORWARD
Length = 234
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 35/151 (23%)
Query: 68 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWEMLRGR-------PH---------- 108
++ DDS R++I LL+K S +V V G KA E L R P+
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 109 --KIDLILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATN 166
+++LI+T+ +P ++GY LL + E ++IPV+I MSS++
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVI--------------MSSENVPA 116
Query: 167 TVYKCMLRGAADYLVKPIRKNELRNLWQHSL 197
+ +C+ GA ++ +KP+R +L L H +
Sbjct: 117 RISRCLEEGAEEFFLKPVRLADLNKLKPHMM 147
>AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15);
transcription regulator/ two-component response
regulator | chr1:28131590-28132710 REVERSE
Length = 206
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 23/140 (16%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEML--------RG-RPHKIDLIL 114
L VL V+ R++I LL+ + KV V G +A + L G + K++LI+
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 115 TEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLR 174
T+ +P ++GY LL I E + IPV+I MSS++ + +CM+
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVI--------------MSSENIQPRIEQCMIE 123
Query: 175 GAADYLVKPIRKNELRNLWQ 194
GA ++L+KP++ +++ L +
Sbjct: 124 GAEEFLLKPVKLADVKRLKE 143
>AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6);
transcription regulator/ two-component response
regulator | chr5:25252745-25254158 REVERSE
Length = 186
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 24/149 (16%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLR---------GRPHKIDLIL 114
L VL V+ R+ I LLR S KV V +A + L K++LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 115 TEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLR 174
T+ +P ++GY LL I E + +PV+I MSS++ + +C+
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVI--------------MSSENILPRIDRCLEE 130
Query: 175 GAADYLVKPIRKNELRNLWQHSLAEVDGL 203
GA D+L+KP++ ++++ L + SL +V+ L
Sbjct: 131 GAEDFLLKPVKLSDVKRL-RDSLMKVEDL 158
>AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr2:17222280-17223536 FORWARD
Length = 225
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 33/146 (22%)
Query: 71 ADDST--RQIIAALLRKCSYKVVAVPDGLKAWEMLRGR------------PH-----KID 111
DDS R++I LL+K S +V V G KA E L R P +I+
Sbjct: 14 VDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEVEIN 73
Query: 112 LILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKC 171
LI+T+ +P ++GY LL + E ++IPV+I MSS++ + +C
Sbjct: 74 LIITDYCMPGMTGYDLLKKVKESAAFRSIPVVI--------------MSSENVPARISRC 119
Query: 172 MLRGAADYLVKPIRKNELRNLWQHSL 197
+ GA ++ +KP++ +L L H +
Sbjct: 120 LEEGAEEFFLKPVKLADLTKLKPHMM 145
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS
RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator |
chr3:17759112-17760740 REVERSE
Length = 184
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 24/140 (17%)
Query: 63 VLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEML--RGRPH--------KIDL 112
+L VL V+ R+ I LLR S KV V +A + L G + KI+L
Sbjct: 24 LLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINL 83
Query: 113 ILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCM 172
I+T+ +P ++GY LL I E + IPV+I MSS++ + +C+
Sbjct: 84 IMTDYSMPGMTGYELLKKIKESSAFREIPVVI--------------MSSENILPRIDRCL 129
Query: 173 LRGAADYLVKPIRKNELRNL 192
GA D+L+KP++ +++ L
Sbjct: 130 EEGAEDFLLKPVKLADVKRL 149
>AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE
REGULATOR 17); transcription regulator/ two-component
response regulator | chr3:20905480-20906368 FORWARD
Length = 153
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 24/144 (16%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEML-RGRPH---------KIDLI 113
L VL V+ + R+++ +L+ S KV +GL+A E L G P K++LI
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 114 LTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCML 173
+T+ +P ++G+ LL + E K +PV+I +SS++ + KC+
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVI--------------LSSENIPTRINKCLA 125
Query: 174 RGAADYLVKPIRKNELRNLWQHSL 197
GA ++ KP++ +++ L H L
Sbjct: 126 SGAQMFMQKPLKLSDVEKLKCHLL 149
>AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE
REGULATOR 6); transcription regulator/ two-component
response regulator | chr1:25565983-25569302 FORWARD
Length = 755
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEMLRGRPHKIDLILTEVDLPSIS 123
+ +LL++ D ++ + ++L++ S +V++V KA M+ + +I LI+ +++P I
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 124 GYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCMLRGAADYLVKP 183
++ L+ + + K+IP+I+++ + T + + A L KP
Sbjct: 73 SHSFLNAL----LLKDIPLILINP--------------EIKTKEPSDLLTKRACFSLDKP 114
Query: 184 IRKNELRNLWQHSLAE 199
I ++++N+WQH ++
Sbjct: 115 ISNDDIKNMWQHVFSK 130
>AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE
REGULATOR 21); transcription factor/ two-component
response regulator | chr5:2252237-2256018 FORWARD
Length = 621
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 26/145 (17%)
Query: 62 MVLRVLLVEADDSTRQIIAALLRKCSYK--------VVAVPDGLKAWEMLRGRPHKIDLI 113
+ + V++V+ D I++ +L+ Y+ V+AV D KA L+ + IDLI
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLI 73
Query: 114 LTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKCML 173
+T+ +P ++G L IT+ N+PV+ VMSS TN + +
Sbjct: 74 ITDYYMPGMNGLQLKKQITQE--FGNLPVL--------------VMSSD--TNKEEESLS 115
Query: 174 RGAADYLVKPIRKNELRNLWQHSLA 198
GA ++ KPI +L ++Q +L+
Sbjct: 116 CGAMGFIPKPIHPTDLTKIYQFALS 140
>AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE
REGULATOR 16); transcription regulator/ two-component
response regulator | chr2:16970258-16971120 FORWARD
Length = 164
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 26/144 (18%)
Query: 64 LRVLLVEADDSTRQIIAALLRKCSYKVVAVPDGLKAWEML------------RGRPHKID 111
L VL V+ + R+++ LL+ KV + L+A E L K+
Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88
Query: 112 LILTEVDLPSISGYALLSLITEHEICKNIPVIIVSKFKSIAFGDCAVMSSQDATNTVYKC 171
LI+T+ +P ++G+ LL + E + +PV+I MSS++ + KC
Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVI--------------MSSENIPTRINKC 134
Query: 172 MLRGAADYLVKPIRKNELRNLWQH 195
+ GA ++ KP++ ++ L H
Sbjct: 135 LASGAQMFMQKPLKLADVEKLKCH 158