Jatropha Genome Database

JcCB0030711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0030711.10 + phase: 0 
         (343 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26780.1 | Symbols: AR192 | AR192; adenyl-nucleotide exchange...   301   3e-82
AT5G55200.1 | Symbols:  | co-chaperone grpE protein, putative | ...   241   4e-64
AT5G17710.1 | Symbols: EMB1241 | EMB1241 (embryo defective 1241)...    57   2e-08
AT5G17710.2 | Symbols: EMB1241 | EMB1241 (embryo defective 1241)...    57   2e-08
AT1G36390.2 | Symbols:  | co-chaperone grpE family protein | chr...    54   2e-07
AT1G36390.1 | Symbols:  | co-chaperone grpE family protein | chr...    54   2e-07

>AT4G26780.1 | Symbols: AR192 | AR192; adenyl-nucleotide exchange
           factor/ chaperone binding / protein binding / protein
           homodimerization | chr4:13485066-13486560 REVERSE
          Length = 327

 Score =  301 bits (772), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 163/307 (53%), Positives = 206/307 (67%), Gaps = 23/307 (7%)

Query: 34  IFSNQIDSLISEHSKQFVPGQVSLFHHSALSSSPFQRFGFTSSASPETNEKEEGSTAENN 93
           +FS++  SL  + S + VP Q+S+    AL     QRF F+SS SPE++EK+      + 
Sbjct: 33  VFSSRFHSLAHDFSHKLVPAQMSMMDSFAL-----QRFNFSSSTSPESDEKKT-----HT 82

Query: 94  GASRNADAKPSNKTEDSASEESEKSGCNSESQPTMSQSVKRRRSGTKRTAFXXXXXXXXX 153
            AS+ ++ KP+         E+ + G +SES+ +++ S KR+R G K  A          
Sbjct: 83  EASKTSEEKPT--------AEANQPGLDSESKDSVTDSAKRKRKGAKGAASSSSESDSES 134

Query: 154 XXXXXXX-----XXXXXXXXXXXXXXXXXXMQDKVLRTYAEMENVMERTKREAENSKKFA 208
                                         ++DKVLRTYAEMENVM+RT+R+AEN+KK+A
Sbjct: 135 DDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYA 194

Query: 209 VQNFAKSLLDVADNLGRASAVVKDSFSKIDASTDATGAVPLLKTLLEGVEMTEKQLADVF 268
           VQNFAKSLLDVADNLGRAS+VVK+SFSK+D S D+ GA PLLKTLLEGVEMTEKQLA+VF
Sbjct: 195 VQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVF 254

Query: 269 KKFGVEKFDPINEPFDPHKHYAVFQLPDASKPPGTVAAVLKAGYVLYDRVIRPAEVGVTI 328
           KKFG+EK+DPINEPFDP++H AVFQ+PDASKP GTVA VLK+GY LYDRVIRPAEVGVT 
Sbjct: 255 KKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVGVTQ 314

Query: 329 AVDNDTE 335
             +N  E
Sbjct: 315 GGENQEE 321


>AT5G55200.1 | Symbols:  | co-chaperone grpE protein, putative |
           chr5:22394705-22396335 FORWARD
          Length = 302

 Score =  241 bits (616), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 118/163 (72%), Positives = 137/163 (84%), Gaps = 5/163 (3%)

Query: 179 MQDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKID 238
           M+DK LRTYAE +N+M+RT R AE++KKFAVQNFA SLLDVADNL RAS+VVK+SFSKID
Sbjct: 140 MKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKESFSKID 199

Query: 239 ASTDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDAS 298
            S D  GA PLLK LLEGVEMTEKQLA+VF+K G+ K DP+NEPF+P++H AVFQ+PDAS
Sbjct: 200 TSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDAS 259

Query: 299 KPPGTVAAVLKAGYVLYDRVIRPAEVGVTIAVDNDTESSNEGG 341
           KP GT+A VLK+GY LYDRVIRPAEVGVT AV+N      EGG
Sbjct: 260 KPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN-----QEGG 297


>AT5G17710.1 | Symbols: EMB1241 | EMB1241 (embryo defective 1241);
           adenyl-nucleotide exchange factor/ chaperone binding /
           protein binding / protein homodimerization |
           chr5:5839560-5841639 REVERSE
          Length = 324

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 180 QDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKIDA 239
           +D+++R  A+ +N  +RT+RE  N    A     ++LL V DN  RA + +K      + 
Sbjct: 161 RDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEK 220

Query: 240 STDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASK 299
            T++  ++              KQ  ++    GV   + + + FDP  H A+ +   A  
Sbjct: 221 VTNSYQSI-------------YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEY 267

Query: 300 PPGTVAAVLKAGYVLYDRVIRPAEVGVT 327
             G V    + G++L +R++RP+ V V+
Sbjct: 268 EEGIVLEEYRKGFLLGERLLRPSMVKVS 295


>AT5G17710.2 | Symbols: EMB1241 | EMB1241 (embryo defective 1241);
           adenyl-nucleotide exchange factor/ chaperone binding /
           protein binding / protein homodimerization |
           chr5:5839560-5841639 REVERSE
          Length = 326

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 180 QDKVLRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVKDSFSKIDA 239
           +D+++R  A+ +N  +RT+RE  N    A     ++LL V DN  RA + +K      + 
Sbjct: 163 RDRLIRISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEK 222

Query: 240 STDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASK 299
            T++  ++              KQ  ++    GV   + + + FDP  H A+ +   A  
Sbjct: 223 VTNSYQSI-------------YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEY 269

Query: 300 PPGTVAAVLKAGYVLYDRVIRPAEVGVT 327
             G V    + G++L +R++RP+ V V+
Sbjct: 270 EEGIVLEEYRKGFLLGERLLRPSMVKVS 297


>AT1G36390.2 | Symbols:  | co-chaperone grpE family protein |
           chr1:13701811-13703524 REVERSE
          Length = 279

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 184 LRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVK---DSFSKIDAS 240
           +R  A+ +N  ++  ++  +++  A     KSLL + D+  +A   V+   D   KID S
Sbjct: 130 IRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKIDTS 189

Query: 241 TDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASKP 300
                         +G+    +Q  +V +   V     + +PFDP  H A+ +    +  
Sbjct: 190 -------------YQGIY---RQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVK 233

Query: 301 PGTVAAVLKAGYVLYDRVIRPAEVGVTIA-VDNDTESSNE 339
            G +   L  G+VL DRV+RPA+V V++  V+  T S+ E
Sbjct: 234 AGIITEELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAAE 273


>AT1G36390.1 | Symbols:  | co-chaperone grpE family protein |
           chr1:13701811-13703524 REVERSE
          Length = 279

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)

Query: 184 LRTYAEMENVMERTKREAENSKKFAVQNFAKSLLDVADNLGRASAVVK---DSFSKIDAS 240
           +R  A+ +N  ++  ++  +++  A     KSLL + D+  +A   V+   D   KID S
Sbjct: 130 IRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKEKKIDTS 189

Query: 241 TDATGAVPLLKTLLEGVEMTEKQLADVFKKFGVEKFDPINEPFDPHKHYAVFQLPDASKP 300
                         +G+    +Q  +V +   V     + +PFDP  H A+ +    +  
Sbjct: 190 -------------YQGIY---RQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVK 233

Query: 301 PGTVAAVLKAGYVLYDRVIRPAEVGVTIA-VDNDTESSNE 339
            G +   L  G+VL DRV+RPA+V V++  V+  T S+ E
Sbjct: 234 AGIITEELNKGFVLGDRVLRPAKVKVSLGPVNKKTPSAAE 273