Jatropha Genome Database

JcCB0028271.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0028271.30 + phase: 0 /partial
         (672 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20760.1 | Symbols:  | calcium-binding EF hand family protein...   521   e-148
AT1G21630.1 | Symbols:  | calcium-binding EF hand family protein...   408   e-114
AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...    85   2e-16
AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...    85   2e-16
AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...    81   2e-15
AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...    81   2e-15

>AT1G20760.1 | Symbols:  | calcium-binding EF hand family protein |
           chr1:7209515-7214773 FORWARD
          Length = 1019

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 323/678 (47%), Positives = 396/678 (58%), Gaps = 62/678 (9%)

Query: 1   MAGQPQGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIG 60
           MAGQ   PNMDQFEAYF+RADLDGDGRISGAEAV FFQGS L KQVLAQIW+ +D+S  G
Sbjct: 1   MAGQ--NPNMDQFEAYFKRADLDGDGRISGAEAVGFFQGSGLSKQVLAQIWSLSDRSHSG 58

Query: 61  FLGRAEFYNALRLVTVAQTKRELTPDIVKAALYGXXXXXXXXXXXNLPATPVLHVPQVNP 120
           FL R  FYN+LRLVTVAQ+KR+LTP+IV AAL             N PA   +  P++N 
Sbjct: 59  FLDRQNFYNSLRLVTVAQSKRDLTPEIVNAAL-------------NTPAAAKIPPPKIN- 104

Query: 121 VVAASAPQMGTVAPTASQNPGFRGPGVPNPGMNQHYFXXXXXXXXXXXXXXXXGASSHPP 180
           + A  AP+    A T     GF GPG PN  +NQ+YF                  S  P 
Sbjct: 105 LSAIPAPRPNPAATTVGPVSGFGGPGAPNAIVNQNYFPPQQNQQMRPNQGISGLTSLRPA 164

Query: 181 QGFISPEFSRGGGMVGNSQAMPTGTAPRPSQAMPTSTAPRPSQLMPSSAPGTSIPTSNIS 240
            G   PE+ R   + G  Q +P G+   P Q +PTS           S PG+S  T N++
Sbjct: 165 AG---PEY-RPSALSGQFQPVPVGSVTHPPQPVPTSV----------SGPGSS--TFNLN 208

Query: 241 TSWLG-GKTSAAMTGPPSTPSATMQPRAQVSMPSQPTANDSKALVASGNGFSTHSSFGSD 299
           + + G G TS   +G      A   P  +     Q +  D KALV SGNG    SSF   
Sbjct: 209 SLYAGAGNTSGYSSGFGGGSLAAPSPGLK-----QESHIDPKALVVSGNGGDMFSSF--- 260

Query: 300 GFSAISSTRKQDLSIPTYSTTGPSALATAVPASTGVHPPVKSNSLDSLQNAFATQPLGGQ 359
                   +KQ+   PT S +  S  +  VP S G+ PP K N+LDSLQ+ F+  P G Q
Sbjct: 261 -------QQKQE---PTLSNS--SISSAIVPTSAGIQPPTKPNALDSLQSTFSMLPSGNQ 308

Query: 360 LQRAQSLXXXXXXXXXXXXXXXXXXXXXXXIGNLS--DNSQLQWPKMKALDIQKYTKVFM 417
           LQ+ +                          G+ +   N+Q  WPKMK  D+QKYTKVFM
Sbjct: 309 LQQPRPAASSQPAVSSQGPSSGLPPGSAVGSGHSTPAGNNQPPWPKMKPSDVQKYTKVFM 368

Query: 418 EVDTDRDGRITGEQARNLFLSWGLPREVLKQVWXXXXXXXXXXXXXREFCFALYLMEQYM 477
           EVD+D+DG+ITGEQARNLFLSW LPREVLK VW             REFC +LYLME+Y 
Sbjct: 369 EVDSDKDGKITGEQARNLFLSWRLPREVLKHVWELSDQDNDTMLSLREFCISLYLMERYR 428

Query: 478 AGRSLPSSLPSNVMLDETLLSMTGQPKVAYGNAAWGPRPGFGMQPGMVTQPIAPATGLRP 537
            GR LP++LPS++M DETLLS++G P   Y NA WG   GF  QPGM  +PI P TG+R 
Sbjct: 429 EGRPLPTALPSSIMFDETLLSISGAPSHGYANAGWGSGQGFVQQPGMGARPITPTTGMR- 487

Query: 538 PVPVTAPQAKPDGVMI-SNQQKPRAPVLEDSFRNQSDEGVQNS--LPQDGTVSEKKVDEP 594
             P         G  I  NQ + +APVL+  F N    G   S  LP+     E+KVDE 
Sbjct: 488 --PPVPAPGPQPGSGIPPNQPRNQAPVLDAPFANHLGNGYSASSNLPE-AAADEEKVDEK 544

Query: 595 EKVILDSKEKIEFYRTKMQDLVLYKSRCENKLNEITERALADKREAEMLGKKYEEKYKQV 654
           +   +DS+EK+++YRTKMQD+VLYKSRC+N+LNEI+ERA ADKREAE L KKYEEKYKQV
Sbjct: 545 QNAYMDSREKLDYYRTKMQDIVLYKSRCDNRLNEISERASADKREAETLAKKYEEKYKQV 604

Query: 655 AEVASKLTIEEATYREIQ 672
           AE+ SKLTIEEA +REI+
Sbjct: 605 AEIGSKLTIEEARFREIE 622


>AT1G21630.1 | Symbols:  | calcium-binding EF hand family protein |
           chr1:7581457-7587796 FORWARD
          Length = 1218

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 298/718 (41%), Positives = 372/718 (51%), Gaps = 95/718 (13%)

Query: 11  DQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFYNA 70
           D F+ YFRRADLDGDG ISGAEAVAFFQGSNLPK VLAQ+W+YAD  + G+LGRAEFYNA
Sbjct: 11  DLFDTYFRRADLDGDGHISGAEAVAFFQGSNLPKHVLAQVWSYADSKKAGYLGRAEFYNA 70

Query: 71  LRLVTVAQTKRELTPDIVKAALYGXXXXXXXXXXXNLPATPVLHVPQVNPVVAASAPQMG 130
           L+LVTVAQ++RELT +IVKAA+Y            NL ATP    PQ   V+ A+  Q  
Sbjct: 71  LKLVTVAQSRRELTAEIVKAAIYSPASANIPAPKINLAATPS---PQPRGVLPATQAQGV 127

Query: 131 TVAPTASQNPGFRGPGVPNPGMNQHYFXXXXXXXXXXXXXXXXGASSHPP----QGFISP 186
           T  P+ +   G RGP         H                    +  PP    Q F SP
Sbjct: 128 TSMPSVAA--GVRGP---------HMGGTVSTSNQQVVPGQQNQFTGIPPSQTQQNFQSP 176

Query: 187 EFSRGGGMVGNSQAMPTGTAPRPS-QAMPTSTAPRPSQLMPSSAPGTSIPTSNISTSWLG 245
               GG             APRP+ Q MP+      S + PS    + IP+S  ST  L 
Sbjct: 177 GMPAGGT-----------NAPRPANQPMPSDWLSGRS-VGPSGNVNSQIPSSQ-STYGLT 223

Query: 246 GKTSAA--MTGPPSTPSATM------QPRAQVSMPSQPTA----------------NDSK 281
              S A  +T P  TP+ T       Q  A V  P + +A                 D K
Sbjct: 224 APNSTANHITKPHITPAVTSSTTTRPQESAPVHNPQESSATFGSRVSNVPSNQLVPKDPK 283

Query: 282 ALVASGNGFSTHSSFGSDGFSAISSTRKQDLSIPTYSTTGPSALATAVPASTGVHPPVKS 341
            L ASGNGF++ S FG D FS ++ST+ +     + STTG S++ T   A   +   V  
Sbjct: 284 ELAASGNGFTSDSLFG-DVFS-VTSTQPKQHPTGSASTTGISSVTTGTVAGPEITQSVVR 341

Query: 342 NSLDSLQNAFATQPLGGQLQRAQSLXXXXXXXXXXXXXXXXXXXXXXXIGNLSDNSQLQ- 400
            S    Q + +   +G Q Q    L                       +G +S  SQL  
Sbjct: 342 QSSIPQQGSLSQHAVGVQTQ----LTGNSGQPYTSSGAASGPPGSTVGVG-ISATSQLAQ 396

Query: 401 --------------------WPKMKALDIQKYTKVFMEVDTDRDGRITGEQARNLFLSWG 440
                               WPKM   D+QKYTKVF++VDTDRDG+ITG QARNLFLSW 
Sbjct: 397 RPPHPHSQPQPRPQGQSQPPWPKMTPADVQKYTKVFVQVDTDRDGKITGNQARNLFLSWR 456

Query: 441 LPREVLKQVWXXXXXXXXXXXXXREFCFALYLMEQYMAGRSLPSSLPSNVMLDETLLSMT 500
           LPR+ LKQVW             REFC A+YLME+Y  GR LP   PS+++  E++ +  
Sbjct: 457 LPRDALKQVWDLSDQDNDSMLSLREFCIAVYLMERYREGRPLPPVFPSSIIHSESMFTSP 516

Query: 501 GQPKVAYGNAAWGPRPGFGMQP---GMVTQPIAPATGLRPPVPVTAPQAKPDGVMISNQQ 557
           GQ    +GNA+WG   GF  QP   G+           RP      P +  DG++   Q 
Sbjct: 517 GQSVAPHGNASWGHPQGFQQQPHPGGLRPPAGPKGKPPRP-----VPLSPSDGMVQPTQP 571

Query: 558 KPRAPVLEDSFRNQSDEGVQNSLP---QDGTVSEKKVDEPEKVILDSKEKIEFYRTKMQD 614
           K + PVLE    +Q  +  Q+SL    ++ T  +KKVDE EK I DSK+KI+F+R KMQ+
Sbjct: 572 KRKMPVLEKPLVDQLSKEEQDSLNTKFEEATAVDKKVDELEKEIADSKQKIDFFRAKMQE 631

Query: 615 LVLYKSRCENKLNEITERALADKREAEMLGKKYEEKYKQVAEVASKLTIEEATYREIQ 672
           LVLYKSRC+N+ NEI ER L DKRE E L KKYEEKYK+   V SKLTIEEAT+R+IQ
Sbjct: 632 LVLYKSRCDNRYNEIAERVLGDKRELESLAKKYEEKYKKSGNVGSKLTIEEATFRDIQ 689


>AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
          GTP binding / GTPase/ calcium ion binding |
          chr4:2804522-2807833 FORWARD
          Length = 545

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%)

Query: 13 FEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFYNALR 72
          ++ +F  AD DGDGR+SG +A  FF  S L +Q L Q+W  AD  R GFLG +EF  A++
Sbjct: 20 YKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSEFITAMK 79

Query: 73 LVTVAQTKRELTPDIVKAAL 92
          LV++AQ   E+T D++K ++
Sbjct: 80 LVSLAQEGHEITSDLLKGSI 99


>AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
          GTP binding / GTPase/ calcium ion binding |
          chr4:2804522-2807833 FORWARD
          Length = 546

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%)

Query: 13 FEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGFLGRAEFYNALR 72
          ++ +F  AD DGDGR+SG +A  FF  S L +Q L Q+W  AD  R GFLG +EF  A++
Sbjct: 20 YKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSEFITAMK 79

Query: 73 LVTVAQTKRELTPDIVKAAL 92
          LV++AQ   E+T D++K ++
Sbjct: 80 LVSLAQEGHEITSDLLKGSI 99


>AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
          GTP binding / GTPase/ calcium ion binding |
          chr3:7075057-7078655 REVERSE
          Length = 545

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%)

Query: 2  AGQPQGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGF 61
          AG     N   ++ +F  +D DGDGRI+G +A+ FF  SNLP+  L QIW  AD  R G+
Sbjct: 8  AGSCSKENQMIYKEWFEFSDSDGDGRITGNDAIKFFTMSNLPRPELKQIWAIADSKRQGY 67

Query: 62 LGRAEFYNALRLVTVAQTKRELTPDIV 88
          LG  EF  A++LV++AQT  E++ +++
Sbjct: 68 LGFKEFIVAMQLVSLAQTGHEISHEVL 94


>AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
          GTP binding / GTPase/ calcium ion binding |
          chr3:7075057-7078655 REVERSE
          Length = 545

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 56/87 (64%)

Query: 2  AGQPQGPNMDQFEAYFRRADLDGDGRISGAEAVAFFQGSNLPKQVLAQIWTYADQSRIGF 61
          AG     N   ++ +F  +D DGDGRI+G +A+ FF  SNLP+  L QIW  AD  R G+
Sbjct: 8  AGSCSKENQMIYKEWFEFSDSDGDGRITGNDAIKFFTMSNLPRPELKQIWAIADSKRQGY 67

Query: 62 LGRAEFYNALRLVTVAQTKRELTPDIV 88
          LG  EF  A++LV++AQT  E++ +++
Sbjct: 68 LGFKEFIVAMQLVSLAQTGHEISHEVL 94