Jatropha Genome Database
- JcCB0028271.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0028271.20 + phase: 0
(586 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 659 0.0
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 175 6e-44
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 5e-42
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 5e-41
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 162 8e-40
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 1e-39
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 158 8e-39
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 9e-38
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-36
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 150 2e-36
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 3e-36
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 149 5e-36
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 6e-36
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 147 2e-35
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 2e-35
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 145 7e-35
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 8e-35
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 8e-35
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 144 1e-34
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 5e-34
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 5e-34
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 142 6e-34
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 139 4e-33
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 139 6e-33
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 139 6e-33
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 139 7e-33
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 7e-33
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 2e-32
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 3e-32
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 4e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 7e-32
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 9e-32
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 4e-31
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 4e-30
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 129 5e-30
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 1e-29
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 5e-29
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 125 1e-28
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 4e-28
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 4e-28
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 7e-28
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 119 4e-27
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 8e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 118 1e-26
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 117 2e-26
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 4e-26
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 6e-26
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 113 3e-25
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 113 4e-25
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 6e-25
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 9e-25
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 108 7e-24
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 106 4e-23
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 9e-23
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 9e-23
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 103 3e-22
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 7e-21
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 97 2e-20
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 96 6e-20
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-20
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 94 2e-19
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 94 3e-19
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 89 9e-18
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 88 1e-17
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 87 3e-17
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 85 1e-16
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 85 1e-16
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 85 2e-16
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 80 5e-15
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 80 5e-15
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 9e-15
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 74 3e-13
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 73 5e-13
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 73 6e-13
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 72 1e-12
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 69 6e-12
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 8e-12
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 68 2e-11
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 67 3e-11
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 66 8e-11
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 64 3e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 64 3e-10
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 64 3e-10
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 63 5e-10
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 63 7e-10
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 9e-10
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 62 1e-09
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 6e-09
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 59 9e-09
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 1e-08
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 58 2e-08
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 57 4e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT2G15820.1 | Symbols: OTP51 | OTP51 (ORGANELLE TRANSCRIPT PROCE... 57 5e-08
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G06270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT4G14190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 55 1e-07
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 54 2e-07
AT1G02370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 53 4e-07
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 53 5e-07
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 52 7e-07
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 52 1e-06
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 52 1e-06
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 51 2e-06
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 51 2e-06
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT5G66631.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 6e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT1G01970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/507 (59%), Positives = 400/507 (78%), Gaps = 6/507 (1%)
Query: 80 DESYVLNELSNLLPFSANAAPTAHPYRNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLN 139
DESYVL ELS+LLP S+N + + + S+K ++V D FL E+KLRGVFLQKL
Sbjct: 46 DESYVLAELSSLLPISSNKTSVS---KEDSSSK---NQVAIDSFLSAEDKLRGVFLQKLK 99
Query: 140 GKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILR 199
GKSAI+ +L++ G+ LS+D+VA L RGNL GEAMV FF+WA+++P + KD+ SY+VILR
Sbjct: 100 GKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILR 159
Query: 200 ALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGC 259
ALG++K FM+ +L+ + EG+ +LE L+I D VR V +AI++F +E FG C
Sbjct: 160 ALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKC 219
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
TES N LL+CLC+RSHV AA S FNA KG IPF+ +YN +I+GWSK+G+V +M+K+L+
Sbjct: 220 STESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLK 279
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
MVE GF PDC ++ L++GLGR GRI D+++IFDN+ K V + +VYNAMI NFIS
Sbjct: 280 EMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
D DE+++YYR +L C+P+++TY+KL+S IK RKV+DALE+ +EML +G++P+TG VT
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
SF++PLCS+GPPHAAM+IY+++RKAGC+IS SAYKLLL RLSRFGKCGMLLN+W+EMQES
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
GY SD+EVYEYI++GLC IG LENAVLVMEE++ KGFCP+R +YS+L +KL+ASNK E A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 560 YKLFLKIKAARSNENARRFWRANGWHF 586
YKLFLKIK AR+ ENAR FWR+NGWHF
Sbjct: 520 YKLFLKIKKARATENARSFWRSNGWHF 546
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 196/395 (49%), Gaps = 10/395 (2%)
Query: 180 WAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRA 239
W IK D+ ++NV+++AL + + + ML D+ + G+ + +T + V G +
Sbjct: 183 WGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 240 QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVAT 297
+ A++I EFG S+NV++ CK V A ++ + + F + T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
+NT++ G K G V +I++ M+++G+ PD T++S++ GL + G +++A+++ D ++
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+D T YN +IS ++EA + R L S PD+ T+ LI R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
A+E+ +EM +G P T I+ LCS G A+ + K+ +GC S+ Y L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
+ K I++EM+ G S + Y +I+GLC ++E+A +M++ + +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSN 572
P + Y+ L +++A + ++A SN
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADI---VQAMTSN 569
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 212/492 (43%), Gaps = 81/492 (16%)
Query: 146 SALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKK 205
+AL++T V L LD + R A + FN A K+P + Y IL LG+
Sbjct: 44 AALSSTDVKL-LDSL-----RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSG 97
Query: 206 FIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG-NTEEFGFGCDTE-- 262
D M K+L D+++ + T I+ + + + + + + +EFG DT
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 263 ---------------------------------SLNVLLQCLCKRSHVRAANSYFNAVK- 288
+ NVL++ LC+ +R A +
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 289 -GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE------------------------ 323
G +P + T+ T++ G+ + G + +I E MVE
Sbjct: 218 YGLVP-DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 324 ------------DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
DGF PD TF++L+ GL +AG ++ A++I D ++++ Y + YN++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
IS +G++ EA++ +++ +C P+ TY LIS K +V +A E+ + +GI
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
+P T S I+ LC AM +++ R GC+ Y +L+ L GK LN
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
+ ++M+ SG + + Y +I+G C + A + +E G + + Y+ L + L
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 552 ASNKVERAYKLF 563
S +VE A +L
Sbjct: 517 KSRRVEDAAQLM 528
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 167/373 (44%), Gaps = 2/373 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTE-GITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
S NVI+ K+ ++ L ++++ + G + T + + +GL +A V AI+I
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKIGQ 310
+ G+ D + N ++ LCK V+ A + + N TYNT+I+ K Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
V + ++ + G PD TF+SL+QGL A+++F+ + K + YN
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I + S G LDEA+ + + + C + TY LI F KA K +A E+ DEM G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
+ ++ T + I+ LC A + + G K Y LL R G
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
+I + M +G D+ Y +I+GLC G++E A ++ KG + Y+ + L
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Query: 551 LASNKVERAYKLF 563
K A LF
Sbjct: 621 FRKRKTTEAINLF 633
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 204/429 (47%), Gaps = 4/429 (0%)
Query: 135 LQKLNGK-SAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHS 193
L+K + + +E AL +GV+L ++ + L R G FF WA KQP I
Sbjct: 90 LRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEV 149
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGIT-VNLETLSIVADGLVRAQRVYKAIQIFGNT 252
Y +++ L K + + ++ ++R E + E ++ A V KAI++
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVC 312
+FGF D LL LCK V+ A F ++ + P N+ + +++ GW ++G++
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMM 269
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ K +L M E GF PD + +LL G AG++ DA + ++ + + + Y +I
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
V ++EA+K + + C+ D+ TYT L+S F K K+ +LD+M+ +G++
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
PS T + + + ++ R+ + Y +++ + G+ + +
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG-FCPSRLIYSK-LYNKL 550
W EM+E+G S ++ + +INGL + G L A +E + +G F S+ K L N +
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTV 509
Query: 551 LASNKVERA 559
L K+E A
Sbjct: 510 LKDKKLEMA 518
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 190/403 (47%), Gaps = 1/403 (0%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+E+ L +DLS D++ + L R + FF WA ++ D +YN ++ L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ + M+ +L ++ T+G+ + +ET +I A+ KA+ IF +++ F E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
+N LL L + + A F+ +K + N+ TY ++ GW ++ + + +I M++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
G PD + +L+GL R+ + DA+K+F + K Y MI +F ++
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
AI+Y+ ++ + PD YT LI+ F +K+ E+L EM +G P T + I+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
+ + P A IY + + + S+ + +++ M +WEEM + G
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
D Y +I GL G+ A +EE L KG + Y+K
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 2/319 (0%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+ + N +L +LG+ K + ++L D E T N+ T +++ +G R + + +A +I+
Sbjct: 264 VETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIG 309
+ + G D + NV+L+ L + A F+ +K K P NV +Y +I + K
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ + + MV+ G PD + + L+ G G +++ ++ + EK + + YN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
A+I + + A + Y ++ N +P I T+ ++ ++ AR + +EM+ +
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
GI P + T I L G A + G K L Y R G+ +
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562
Query: 490 LNIWEEMQESGYSSDMEVY 508
+ + + SG + E++
Sbjct: 563 EELAQRAKFSGKFAAAEIF 581
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 136/308 (44%), Gaps = 7/308 (2%)
Query: 263 SLNVLLQCLCKRSHVRAANSYF---NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
S +++++ L + H R F A + + TYN++++ +K Q M +LE
Sbjct: 160 SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLE 219
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M G TF ++ A + A+ IF+ + + + + N ++ + +
Sbjct: 220 EMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDS-LGRA 277
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
L + + L P++ TYT L++ + + R + +A + ++M+ QG+ P
Sbjct: 278 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+E L A+ ++ + G ++ +Y +++ + + +++M +S
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKV-ER 558
G D VY +I G +L+ +++E KG P Y+ L KL+A+ K+ E
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI-KLMANQKMPEH 456
Query: 559 AYKLFLKI 566
A +++ K+
Sbjct: 457 ATRIYNKM 464
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 100/243 (41%), Gaps = 2/243 (0%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
GF D T++S++ L + + E + + + + K +L + + F + + +A
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKA 248
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
+ + + ++T L+ + +A K+ ++L + L + P+ T T +
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
C A I+ G K + A+ ++L L R K + ++ M+ G +
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 505 MEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFL 564
+ Y +I C +E A+ ++ + G P +Y+ L K++ Y+L
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 565 KIK 567
+++
Sbjct: 428 EMQ 430
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D TY ++S K R+ + +L+EM +G++ + T T ++ + A+ I+
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 252
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
+ +K KI + LL L R K G + + + ++ +M Y ++NG C +
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
L A + + + +G P + ++ + LL S K A KLF +K+ N R +
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 199/413 (48%), Gaps = 2/413 (0%)
Query: 143 AIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALG 202
++SAL +G+ +S +VV L R G FF W+ KQ + +Y++++ +
Sbjct: 50 VLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTA 109
Query: 203 KKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTE 262
K + M ++ +R + + +N+ET IV RAQ+V +AI F E++ +
Sbjct: 110 KIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 168
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
+ N LL LCK +VR A F ++ + + TY+ ++ GW K + + +++ M+
Sbjct: 169 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 228
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
+ G PD T+ ++ L +AGR+++AL I ++ T +Y+ ++ + + L+
Sbjct: 229 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 288
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
EA+ + + + D+ + LI AF KA ++ + +L EM +G+ P++ + +
Sbjct: 289 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
L G A ++++ K C+ Y +++ + +W+ M++ G
Sbjct: 349 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 407
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M + +INGLC + A +++EE + G PS + + +L L+ +
Sbjct: 408 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 460
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+V Y+ +I +KI Q M ++ AM + + TF +++ RA ++++A+ F
Sbjct: 97 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAF 155
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + + D +N ++S ++ +A + + + + PD TY+ L+ + K
Sbjct: 156 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKE 214
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A E+ EM+ G P T + ++ LC G A+ I + + CK + Y
Sbjct: 215 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 274
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+L+ + ++ + EM+ SG +D+ V+ +I C +++N V++E
Sbjct: 275 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 334
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
KG P+ + + L+ + + A+ +F K+
Sbjct: 335 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 367
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 190/403 (47%), Gaps = 1/403 (0%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+E+ L +DLS D++ + L R + FF WA ++ D +YN ++ L K
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ + M+ +L ++ T+G+ + +ET +I A+ KA+ IF +++ F E+
Sbjct: 207 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 265
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
+N LL L + + A F+ +K + N+ TY ++ GW ++ + + +I M++
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
G PD + +L+GL R+ + DA+K+F + K Y MI +F ++
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
AI+Y+ ++ + PD YT LI+ F +K+ E+L EM +G P T + I+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
+ + P IY + + + S+ + +++ M +W+EM + G
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
D Y +I GL + G+ A +EE L KG + Y+K
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 140/340 (41%), Gaps = 26/340 (7%)
Query: 263 SLNVLLQCLCKRSHVRAANSYF---NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
S +++++ L + H R F A + + TYN++++ +K Q M +LE
Sbjct: 159 SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLE 218
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M G TF ++ A + A+ IF+ + + + + N ++ + +
Sbjct: 219 EMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDS-LGRA 276
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
L + + L P++ TYT L++ + + R + +A + ++M+ G+ P
Sbjct: 277 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+E L A+ ++ + G ++ +Y +++ + + +++M +S
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIY---------------- 543
G D VY +I G +L+ +++E KG P Y
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 544 SKLYNKLLASNKVERAYKLFLKIK----AARSNENARRFW 579
+++YNK++ N++E + F I AR+ E R W
Sbjct: 457 TRIYNKMI-QNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 495
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 189/403 (46%), Gaps = 1/403 (0%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+E+ L +DLS D++ + L R + FF WA ++ +YN ++ L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ + M+ +L ++ T+G+ + +ET +I A+ KA+ IF +++ F E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
+N LL L + + A F+ +K + N+ TY ++ GW ++ + + +I M++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
G PD + +L+GL R+ + DA+K+F + K Y MI +F ++
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
AI+Y+ ++ + PD YT LI+ F +K+ E+L EM +G P T + I+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
+ + P IY + + + S+ + +++ M +W+EM + G
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
D Y +I GL + G+ A +EE L KG + Y+K
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 142/340 (41%), Gaps = 26/340 (7%)
Query: 263 SLNVLLQCLCKRSHVR-AANSYFNAVKGKIPFNVA--TYNTIIAGWSKIGQVCQMKKILE 319
S +++++ L + H R A +F + F A TYN++++ +K Q M +LE
Sbjct: 160 SHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLE 219
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M G TF ++ A + A+ IF+ + + + + N ++ + +
Sbjct: 220 EMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDS-LGRA 277
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
L + + L P++ TYT L++ + + R + +A + ++M+ G+ P
Sbjct: 278 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+E L A+ ++ + G ++ +Y +++ + + +++M +S
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIY---------------- 543
G D VY +I G +L+ +++E KG P Y
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 544 SKLYNKLLASNKVERAYKLFLKIK----AARSNENARRFW 579
+++YNK++ N++E + F I AR+ E R W
Sbjct: 458 TRIYNKMI-QNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 496
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 196/423 (46%), Gaps = 10/423 (2%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNV---ILRA 200
+E AL +G+DL ++ + L R G FF WA KQP HSY V ++
Sbjct: 84 LELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGY---FHSYEVCKSMVMI 140
Query: 201 LGKKKFIDFMLKMLRDLR-TEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGC 259
L K + + ++ ++R T + E ++ A V KA+++ ++G
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEP 200
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
D LL LCK V+ A+ F ++ K P N+ + +++ GW + G++ + K++L
Sbjct: 201 DEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M E G PD F +LL G AG++ DA + +++ ++ + + Y +I
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 380 D-LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
+DEA++ + + C+ DI TYT LIS F K + +LD+M +G++PS T
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
+ + + ++ ++ GC L Y +++ + G+ + +W EM+
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF--CPSRLIYSKLYNKLLASNKV 556
+G S ++ + +ING + G L A +E + +G P L N L+ +K+
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKL 500
Query: 557 ERA 559
E A
Sbjct: 501 EMA 503
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 212/433 (48%), Gaps = 5/433 (1%)
Query: 142 SAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRAL 201
S +E+ L V LS ++ + L + + G + F WA Q +YN ++ +L
Sbjct: 79 SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESL 138
Query: 202 GKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDT 261
GK K + ++ D++ + + ++ ET ++++ RA++V +AI F EEFGF ++
Sbjct: 139 GKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMES 197
Query: 262 ESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEA 320
N +L L K +V A F+ +K K ++ +Y ++ GW + + ++ ++
Sbjct: 198 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNRE 257
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M ++GF PD + ++ +A + E+A++ F+ + +++ ++ ++I+ S
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L++A++++ S+ + TY L+ A+ ++++ DA + +DEM +G+ P+ T
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
+ L A +Y+ C+ ++S Y++++ + M + IW+EM+ G
Sbjct: 378 ILHHLIRMQRSKEAYEVYQ---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
M ++ +I LC+ +L+ A E L G P ++S+L LL + ++
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 494
Query: 561 KLFLKIKAARSNE 573
L +K+ R +
Sbjct: 495 DLVVKMDRLRKTQ 507
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 109/288 (37%), Gaps = 42/288 (14%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC---STFDSLLQGLGRAGRIEDAL 350
+ YN +I KI Q K++ ++V+D TF + + RA ++++A+
Sbjct: 127 TTSNYNALIESLGKIKQF----KLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAI 182
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
F + E + +E+S +N M+ ++ +A K + + +PDI +YT L+ +
Sbjct: 183 GAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW 242
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
+ + E+ EM +G P I C A+ + + CK S
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ C + INGL + +L +A+ E
Sbjct: 303 HIF------------CSL-----------------------INGLGSEKKLNDALEFFER 327
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
S GF Y+ L S ++E AYK +++ NAR +
Sbjct: 328 SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 188/395 (47%), Gaps = 9/395 (2%)
Query: 177 FFNWAIKQPM---IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVA 233
F+++ + M I + S+N++++AL K +F+D +++ R + + T +
Sbjct: 170 FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA--VKGKI 291
DGL + +R+ +A+ + + G NVL+ LCK+ + + +KG +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
P N TYNT+I G G++ + +LE MV P+ T+ +L+ GL + R DA++
Sbjct: 290 P-NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+ ++ E+ Y L +Y+ +IS G +EA+ +R + C P+I Y+ L+
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
+ K +A E+L+ M+ G +P+ T +S ++ G A+ ++K K GC +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 472 AYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEES 531
Y +L+ L G+ + +W +M G D Y II GLC IG ++ A+ + E
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 532 L---HKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
L P + Y+ L + L + RA L
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 180/415 (43%), Gaps = 45/415 (10%)
Query: 192 HSYNVILRALGK----KKFIDFMLKMLRDLRTEGITVNLETL--SIVADGLV-RAQRVYK 244
S+ V+ RA GK K +D +M+ + R + + ++ I+ +GL R Y
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYD 172
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVATYNTIIA 303
+ + + S N++++ LCK V RA + + K + TY T++
Sbjct: 173 --YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD 230
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G K ++ + +L+ M +G +P ++ L+ GL + G + K+ DN+ K V
Sbjct: 231 GLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP 290
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
YN +I G LD+A+ ++S+ C P+ TY LI+ +K R+ DA+ +L
Sbjct: 291 NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 424 D-----------------------------------EMLGQGIVPSTGTVTSFIEPLCSF 448
+M +G P+ + ++ LC
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
G P+ A I R +GC + Y L+ + G C + +W+EM ++G S + Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+I+GLC +G+++ A++V + L G P + YS + L ++ A KL+
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 157/373 (42%), Gaps = 6/373 (1%)
Query: 208 DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN-TEEFGFGCDTESLNV 266
D + K+L +R E + + +V +A KA+ +F +EF +S N
Sbjct: 94 DSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNS 153
Query: 267 LLQCLCKRS-HVRAANSYFNAVKGKIPFNVA----TYNTIIAGWSKIGQVCQMKKILEAM 321
+L + + R Y V + N++ ++N +I K+ V + ++ M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
E PD T+ +L+ GL + RI++A+ + D + + +YN +I GDL
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
K + C P+ TY LI K+ A+ +L+ M+ +P+ T +
Sbjct: 274 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I L A+ + + G ++ Y +L+ L + GK +++W +M E G
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
++ VY +++GLC G+ A ++ + G P+ YS L + E A +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 562 LFLKIKAARSNEN 574
++ ++ + N
Sbjct: 454 VWKEMDKTGCSRN 466
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 25/289 (8%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
H Y+V++ L K+ + + + R + +G N+ S++ DGL R + +A +I
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQ 310
G + + + L++ K A + + K N Y+ +I G +G+
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV---EKDYVLETSV 367
V + + M+ G PD + S+++GL G ++ ALK++ ++ E +
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT---------------------KL 406
YN ++ D+ A+ +L CDPD+ T +L
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
+ +K ++V+ A +++ MLG+ + P T T + +C +AA+
Sbjct: 603 VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 1/348 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G NL T +V +GL + + A + E D N ++ LCK HV A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ F ++ K I NV TY+++I+ G+ ++L M+E P+ TF++L+
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G+ +A K+ D+++++ + YN++I+ F LD+A + + ++S +C PD
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+DTY LI F K+++V D E+ EM +G+V T T T+ I+ L G A ++K
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G + Y +LL L GK L +++ MQ+S D+ +Y +I G+C G
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++++ + KG P+ + Y+ + + L + ++ AY L K+K
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 2/318 (0%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
++L D+ + I NL T + + D V+ + +A ++ + + D + N L+
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 272 CKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
C + A F + K F ++ TYNT+I G+ K +V ++ M G D
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T+ +L+QGL G ++A K+F +V + Y+ ++ + G L++A++ +
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ + DI YT +I KA KV D ++ + +G+ P+ T + I LCS
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 479
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A + K+ ++ G Y L+ R G + EM+ + D
Sbjct: 480 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 539
Query: 511 IINGLCNIGQLENAVLVM 528
+ N L + G+L+ + L M
Sbjct: 540 VANMLHD-GRLDKSFLDM 556
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 164/424 (38%), Gaps = 72/424 (16%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFM--LKMLRDLRTEGITVNLETLSIVAD 234
F +K +P I +N +L A+ K K D + L +L + G ++ TLS + +
Sbjct: 29 LFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLN 87
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFN 294
G +R+ A+ + E G+ DT
Sbjct: 88 GYCHGKRISDAVALVDQMVEMGYRPDT--------------------------------- 114
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
T+ T+I G + + +++ MV+ G P+ T+ ++ GL + G I+ A + +
Sbjct: 115 -ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 173
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS------ 408
+ + ++N +I + +D+A+ ++ + + P++ TY+ LIS
Sbjct: 174 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 233
Query: 409 -----------------------------AFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
AF+K K +A ++ D+M+ + I P T
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 293
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
S I C A +++ C L Y L+ + + ++ EM
Sbjct: 294 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 353
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G D Y +I GL + G +NA V ++ + G P + YS L + L + K+E+A
Sbjct: 354 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 413
Query: 560 YKLF 563
++F
Sbjct: 414 LEVF 417
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 35/281 (12%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
IK+ + P DI +YN ++ +D +M + ++ +L+T + + G +++R
Sbjct: 281 IKRSIDP-DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTI 301
V ++F G DT TY T+
Sbjct: 340 VEDGTELFREMSHRGLVGDT----------------------------------VTYTTL 365
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I G G +K+ + MV DG PD T+ LL GL G++E AL++FD + + +
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
L+ +Y MI G +D+ + L P++ TY +IS R + +A
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
+L +M G +P +GT + I G A+ + + R
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 120/249 (48%), Gaps = 4/249 (1%)
Query: 334 DSLLQGL--GRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC- 390
D L G+ G+ +++DA+ +F +V+ + +N ++S + D I
Sbjct: 9 DCLFVGISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLG 68
Query: 391 -LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
++ +P I T + L++ + ++++DA+ ++D+M+ G P T T T+ I L
Sbjct: 69 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128
Query: 450 PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
A+ + R + GC+ +L Y +++ L + G + N+ +M+ + +D+ ++
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
II+ LC +++A+ + +E KG P+ + YS L + L + + A +L +
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 570 RSNENARRF 578
+ N N F
Sbjct: 249 KINPNLVTF 257
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F + + + P D+ +YN +++ K K ++ ++ R++ G+ + T + + GL
Sbjct: 312 FEFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVA 296
A ++F G D + ++LL LC + A F+ + K +I ++
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
Y T+I G K G+V + ++ G P+ T+++++ GL +++A + +
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490
Query: 357 VEKDYVLETSVYNAMISNFISVGD 380
E + ++ YN +I + GD
Sbjct: 491 KEDGPLPDSGTYNTLIRAHLRDGD 514
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 203/454 (44%), Gaps = 12/454 (2%)
Query: 135 LQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSY 194
+ LN +E AL + VDL+ VV K L R + FF WA Q + +Y
Sbjct: 1 MANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAY 60
Query: 195 NVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY-----KAIQIF 249
N ++ L K+ + +++ D+ + + N +T+ +V D L+ R Y +Q F
Sbjct: 61 NEMIDILSSTKYKNKQFRIVIDM-LDYMKRNNKTVVLV-DVLLEILRKYCERYLTHVQKF 118
Query: 250 GNTEEFGFGCDTE--SLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSK 307
+ E + N+LL LCK V+ + ++ ++ + T+N + GW +
Sbjct: 119 AKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCR 178
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+ + K+LE M+E G P+ T+ + + +AG +++A +FD ++ K +
Sbjct: 179 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 238
Query: 368 YNAMISNFISVGDLDEAIKYYRC---LLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+++ D+A + + ++S C PD+ TY +I A KV +A + LD
Sbjct: 239 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 298
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM +G P T F+ LC A+ +Y R ++ C S+ Y +L+
Sbjct: 299 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 358
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
N W EM + D+E Y +INGL + + + A ++EE ++KG ++
Sbjct: 359 DPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFD 418
Query: 545 KLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+L ++ +K+ +K ++ ARRF
Sbjct: 419 SFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRF 452
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 174/349 (49%), Gaps = 1/349 (0%)
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA 279
G NL T +V +GL + A+ + E D N ++ LCK HV
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 280 ANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ 338
A + F ++ K I NV TY+++I+ G+ ++L M+E P+ TF++L+
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
+ G+ +A K++D+++++ + YN++++ F LD+A + + ++S +C P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D+ TY LI F K+++V D E+ EM +G+V T T T+ I+ L G A ++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
K+ G + Y +LL L GK L +++ MQ+S D+ +Y +I G+C
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G++++ + KG P+ + Y+ + + L + ++ AY L K+K
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 175/424 (41%), Gaps = 39/424 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F +K +P I +N +L A+ K K D ++ + ++ I L T +I+ +
Sbjct: 72 LFGGMVKSRPLPS-IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFN 294
R ++ A+ + G + G+ +L+ LL C + A + + + G P +
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-D 189
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
T+ T+I G + + +++ MV+ G P+ T+ ++ GL + G + AL + +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS------ 408
+ + ++N +I + +D+A+ ++ + + P++ TY+ LIS
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 409 -----------------------------AFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
AF+K K +A ++ D+M+ + I P T
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
S + C A +++ C + Y L+ + + ++ EM
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G D Y +I GL + G +NA V ++ + G P + YS L + L + K+E+A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 560 YKLF 563
++F
Sbjct: 490 LEVF 493
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 2/318 (0%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
++L D+ + I NL T + + D V+ + +A +++ + + D + N L+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 272 CKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
C + A F + K F +V TYNT+I G+ K +V ++ M G D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T+ +L+QGL G ++A K+F +V + Y+ ++ + G L++A++ +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ + DI YT +I KA KV D ++ + +G+ P+ T + I LCS
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A + K+ ++ G + Y L+ R G + EM+ + D
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 615
Query: 511 IINGLCNIGQLENAVLVM 528
+ N L + G+L+ + L M
Sbjct: 616 VANMLHD-GRLDKSFLDM 632
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 122/259 (47%)
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
MV+ P F+ LL + + + + + + + + + V YN +I+ F
Sbjct: 75 GMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRS 134
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
+ A+ ++ +P I T + L++ + ++++DA+ ++D+M+ G P T T T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+ I L A+ + R + GC+ +L Y +++ L + G + LN+ +M+ +
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
+D+ ++ II+ LC +++A+ + +E KG P+ + YS L + L + + A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 560 YKLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 315 SQLLSDMIEKKINPNLVTF 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F + + + P D+ +YN +++ K K ++ ++ R++ G+ + T + + GL
Sbjct: 387 MFEFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNV 295
A ++F G D + ++LL LC + A F+ + K +I ++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
Y T+I G K G+V + ++ G P+ T+++++ GL +++A +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 356 LVEKDYVLETSVYNAMISNFISVGD 380
+ E + + YN +I + GD
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%)
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y ++ N + LD+AI + ++ + P I + KL+SA K +K + + ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
IV T I C A+ + + K G + S+ LL +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
+ + ++M E GY D + +I+GL + AV +++ + +G P+ + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 548 NKLLASNKVERAYKLFLKIKAAR 570
N L + A L K++AA+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAK 255
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 182/379 (48%), Gaps = 1/379 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D ++ ++ L + + ++ + +G +L T V +GL + A+ +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
E+ D + ++ LCK HV A + F + K I +V TY+++I+
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G+ ++L M+E P+ TF+SL+ + G++ +A K+FD ++++ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N++I+ F LDEA + + ++S +C PD+ TY LI+ F KA+KV D +E+ +M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G+V +T T T+ I A M++K+ G ++ Y LL L + GK
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ ++E +Q+S D+ Y + G+C G++E+ + KG P + Y+ + +
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 549 KLLASNKVERAYKLFLKIK 567
E AY LF+K+K
Sbjct: 529 GFCKKGLKEEAYTLFIKMK 547
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 197/427 (46%), Gaps = 7/427 (1%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGKKKFIDFMLK 212
++ + L++ N EA+ + +K QP D+ +Y ++ L K+ D L
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQP----DLVTYGAVINGLCKRGEPDLALN 226
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L + I ++ S V D L + + V A+ +F + G D + + L+ CLC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 273 KRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
A+ + ++ KI NV T+N++I ++K G++ + +K+ + M++ P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
T++SL+ G R+++A +IF +V KD + + YN +I+ F + + ++ +R +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ TYT LI F +A +A + +M+ G+ P+ T + ++ LC G
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
AM++++ +K+ + + Y ++ + + GK +++ + G D+ Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARS 571
I+G C G E A + + G P Y+ L L + +L ++++ R
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 572 NENARRF 578
+A +
Sbjct: 587 AGDASTY 593
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 196/475 (41%), Gaps = 53/475 (11%)
Query: 126 PEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQP 185
P LRG++ L+ E N + L LD EA+ +F +P
Sbjct: 15 PSFCLRGIYFSGLSYDGYREKLSRNALLHLKLD-------------EAVDLFGEMVKSRP 61
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
I ++ +L A+ K K D ++ + G++ NL T +I+ + L R ++ A
Sbjct: 62 F--PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIA 303
+ I G + G+G +LN LL C + + A + + + G P + T+ T++
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP-DTVTFTTLVH 178
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG------------------- 344
G + + + ++E MV G PD T+ +++ GL + G
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 345 ----------------RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
++DAL +F + K + Y+++IS + G +A +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+L +P++ T+ LI AF K K+ +A ++ DEM+ + I P+ T S I C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
A I+ C + Y L+ + K + ++ +M G + Y
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+I+G +NA +V ++ + G P+ + Y+ L + L + K+E+A +F
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 142/342 (41%), Gaps = 4/342 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D+ +Y+ ++ L ++L D+ I N+ T + + D + ++ +A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYNTIIAG 304
++F + + + N L+ C + A F + K +P +V TYNT+I G
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-DVVTYNTLING 389
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K +V ++ M G + T+ +L+ G +A ++A +F +V
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YN ++ G L++A+ + L + +PDI TY + KA KV D ++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+ +G+ P + I C G A ++ + ++ G Y L+ R G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ +EM+ ++ D Y + + L + G+L+ L
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRLDKGFL 610
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 14/265 (5%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV---EKDYVLETS----VYNAMIS 373
MV+ P F LL + + +K FD ++ EK +L S YN MI+
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAK-------MKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
L A+ ++ P I T L++ F ++++A+ ++D+M+ G P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
T T T+ + L A+ + +R GC+ L Y ++ L + G+ + LN+
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
+M++ +D+ +Y +I+ LC +++A+ + E +KG P YS L + L
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 554 NKVERAYKLFLKIKAARSNENARRF 578
+ A +L + + N N F
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTF 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 96/222 (43%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
++++A+ +F +V+ ++ ++S + D I + + ++ TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
+I+ + +++ AL +L +M+ G PS T+ S + C A+ + + +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G + + L+ L + K + + E M G D+ Y +INGLC G+ + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+ ++ + +IYS + + L V+ A LF ++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%)
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
LDEA+ + ++ + P I ++KL+SA K +K + ++M G+ + T
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I LC A+ I + K G S+ LL + + + ++M E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
Y D + +++GL + AV ++E + KG P + Y + N L + + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 561 KLFLKIKAAR 570
L K++ +
Sbjct: 226 NLLNKMEKGK 235
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 173/361 (47%), Gaps = 7/361 (1%)
Query: 209 FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLL 268
F+ KM++ G +L T + + +G R+ AI +F GF + + L+
Sbjct: 140 FLGKMMK----LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 269 QCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
+CLCK H+ A FN G P NV TYN ++ G +IG+ +L M++
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRP-NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
P+ TF +L+ + G++ +A ++++ +++ + Y ++I+ G LDEA +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
+ + N C P+ YT LI F K+++V D +++ EM +G+V +T T T I+ C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDME 506
G P A ++ + + Y +LL L GK L I+E M++ ++
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 507 VYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
Y II G+C +G++E+A + KG P+ + Y+ + + + A LF K+
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 567 K 567
K
Sbjct: 495 K 495
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 35/308 (11%)
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
IP + T N ++ Q C+ L M++ GF PD TF SLL G RIEDA+
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 351 KIFDNLV----EKDYVLETSV-------------------------------YNAMISNF 375
+FD ++ + + V T++ YNA+++
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
+G +A R ++ +P++ T+T LI AF+K K+ +A E+ + M+ + P
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T S I LC +G A ++ + GC + Y L+ + + + I+ E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M + G ++ Y +I G C +G+ + A V + + P Y+ L + L + K
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 556 VERAYKLF 563
VE+A +F
Sbjct: 414 VEKALMIF 421
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 143/321 (44%), Gaps = 1/321 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ +Y ++R L K + ++ +++ + T G N+ T + + GL R A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKI 308
+ + + + L+ K + A +N ++ + +V TY ++I G
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + + +++ M +G P+ + +L+ G ++ R+ED +KIF + +K V T Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+I + VG D A + + + S PDI TY L+ KV AL + + M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ + + T T I+ +C G A ++ G K ++ Y ++ R G
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 489 LLNIWEEMQESGYSSDMEVYE 509
+++++M+E G+ + VY+
Sbjct: 487 ADSLFKKMKEDGFLPNESVYK 507
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
+N I+ + P D+ +Y ++ L +D +M + G N + + G
Sbjct: 280 LYNVMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNV 295
+++RV ++IF + G +T + VL+Q C A FN + + P ++
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
TYN ++ G G+V + I E M + + T+ ++QG+ + G++EDA +F +
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEA 384
L K Y MIS F G + EA
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEA 487
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 183/423 (43%), Gaps = 5/423 (1%)
Query: 139 NGKSAIESALANTGVDLSLDVVAKTLYR-GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVI 197
N K +E L +S ++V + L R NLG A FF WA + P + SY+++
Sbjct: 50 NPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHR-FFLWARRIPDFAHSLESYHIL 108
Query: 198 LRALGKKKFIDFMLKMLRDLRTEG-ITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG 256
+ LG K + L + R ++ + IV RA +A + F EFG
Sbjct: 109 VEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFG 168
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMK 315
+ L+ LL LC + HV A +F KG I + TY+ ++ GW++I +
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
K+ + M+E D +++LL L ++G ++ K+F + + + I +
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
GD+ A K + + P++ T+ +I K KV DA +LDEM+ +G P T
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T S + C + A + R + C Y ++L L R G+ IWE
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 496 MQESGYSSDMEVYEYIINGLC-NIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
M E + + Y +I+GL G+LE A E + +G P L N+L+
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Query: 555 KVE 557
+++
Sbjct: 469 QMD 471
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 202/439 (46%), Gaps = 42/439 (9%)
Query: 166 RGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
R ++ E + F I+ +P I ++ +L + K K D ++ + + GI +
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPS-IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
L + +IV + L R R A+ + G +FG+ D +++ L+ C+ + V A +
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 286 AVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRA 343
++ G P +V YNTII G KIG V ++ + M DG D T++SL+ GL +
Sbjct: 164 KMEEMGFRP-DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 344 GRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY-----RC-------- 390
GR DA ++ ++V +D V + A+I F+ G EA+K Y RC
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 391 ----------------------LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+++ C PD+ TY LI+ F K+++V + ++ EM
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G+V T T + I+ G P AA I+ R + ++ Y +LL L +
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEK 399
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
L ++E MQ+S D+ Y +I+G+C IG +E+A + KG P + Y+ + +
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 549 KLLASNKVERAYKLFLKIK 567
+ +++ L+ K++
Sbjct: 460 GFCRKRQWDKSDLLYRKMQ 478
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 35/256 (13%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
+++RD+ I N+ T + V D V+ + +A++++ D + N L+ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 272 CKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD 329
C V A + KG +P +V TYNT+I G+ K +V + K+ M + G D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLP-DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 330 CSTFDSLLQGLGRAGR--------------------------------IEDALKIFDNLV 357
T+++++QG +AGR +E AL +F+N+
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+ + L+ + YN +I +G++++A +R L PD+ +YT +IS F + R+
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 418 DALEMLDEMLGQGIVP 433
+ + +M G++P
Sbjct: 469 KSDLLYRKMQEDGLLP 484
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 10/423 (2%)
Query: 141 KSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRA 200
+ + + L V S ++V + L R E FF WA KQ + + Y+ ++
Sbjct: 71 RKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISI 130
Query: 201 LGKKKFIDFMLKMLRDLRTEGIT-VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGC 259
LGK + D ++ ++R + VN +TL I+ V KAI F + F
Sbjct: 131 LGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEM 190
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSK-IGQVCQMKKIL 318
+ LL LC+ +V A K K PF+ ++N ++ GW IG + +++
Sbjct: 191 GIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVW 250
Query: 319 EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
M G D ++ S++ + G + LK+FD + ++ + VYNA++
Sbjct: 251 MEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKA 310
Query: 379 GDLDEAIKYYRCLLSNN-CDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
+ EA + + +P++ TY LI KARK +A ++ DEML +G+ P+ T
Sbjct: 311 SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 370
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+F+ L + + + RK GC+ ++ Y +L+ +L R+ +L +W+EM+
Sbjct: 371 YHAFMRILRT---GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 427
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSR----LIYSKLYNKLLAS 553
E D+ Y +I+GL G++E A +E KG P+ +I S K A
Sbjct: 428 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAE 487
Query: 554 NKV 556
++
Sbjct: 488 QRI 490
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 172/354 (48%), Gaps = 14/354 (3%)
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA 279
G +L T V +GL + + A+ + E + N ++ LCK HV
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 280 ANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ 338
A F ++ K I NV TYN++I G+ ++L M+E P+ TF++L+
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
+ G++ +A K+ + ++++ +T YN +I+ F LDEA + ++ ++S +C P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
+I TY LI+ F K ++V D +E+ EM +G+V +T T T+ I+ G +A M++
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
K+ + Y +LL L +GK L I++ +Q+S ++ +Y +I G+C
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 519 GQLENAVLVMEESLHKGFC-----PSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G++ A FC P + Y+ + + L + ++ A LF K+K
Sbjct: 517 GKVGEA--------WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 183/392 (46%), Gaps = 10/392 (2%)
Query: 164 LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L+ N EA V + +++ P D+ +Y ++ L K+ ID L +L + I
Sbjct: 198 LFLHNKASEA-VALVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
N+ + + D L + + V A+ +F E G + + N L+ CLC A+
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 284 F-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
N ++ KI NV T+N +I + K G++ + +K+ E M++ PD T++ L+ G
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
R+++A ++F +V KD + YN +I+ F +++ ++ +R + + T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
YT +I F +A A + +M+ + T + + LCS+G A++I+K +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
K+ ++++ Y ++ + + GK G W+ D+ Y +I+GLC+ L+
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 523 NAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
A + + G P+ S YN L+ +N
Sbjct: 553 EADDLFRKMKEDGTLPN----SGTYNTLIRAN 580
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 174/395 (44%), Gaps = 9/395 (2%)
Query: 174 MVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVA 233
+VI ++ I D+++Y++ + ++ + L +L + G ++ TLS +
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKI 291
+G ++R+ A+ + E G+ DT + L+ L + A + + + +G
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
P ++ TY T++ G K G + +L M + F++++ L + +E A+
Sbjct: 221 P-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+F + K YN++I+ + G +A + +L +P++ T+ LI AF
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
K K+ +A ++ +EM+ + I P T T I C A ++K C ++
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 472 AYKLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
Y L ++ F KC + + ++ EM + G + Y II G G ++A +V
Sbjct: 400 TYNTL---INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 529 EESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
++ + + YS L + L + K++ A +F
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I ++ ++N ++ A K+ + K+ ++ I + T +++ +G R+ +A
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
Q+F + ++ N L+ CK V F + + + N TY TII G+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ G + + + MV + D T+ LL GL G+++ AL IF L + + L
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+YN MI G + EA + C LS PD+ TY +IS R + +A ++ +
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLF-CSLS--IKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
M G +P++GT + I A+ + K R +G
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 117/258 (45%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV+ P F+ LL + + + E + + + + + Y+ I+ F
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +PDI T + L++ + +++++DA+ ++D+M+ G P T T T+
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L A+ + + + GC+ L Y ++ L + G + LN+ +M+ +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+++ ++ II+ LC +E AV + E KG P+ + Y+ L N L + A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 561 KLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 314 RLLSNMLEKKINPNVVTF 331
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 121/257 (47%), Gaps = 4/257 (1%)
Query: 184 QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY 243
Q I D +YN+++ +D +M + + ++ N++T + + +G + +RV
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTII 302
+++F + G +T + ++Q + +A F V ++P ++ TY+ ++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G G++ I + + + + ++++++G+ +AG++ +A +F +L K V
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+ YN MIS S L EA +R + + P+ TY LI A ++ A + E+
Sbjct: 536 V---TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 423 LDEMLGQGIVPSTGTVT 439
+ EM G V T++
Sbjct: 593 IKEMRSSGFVGDASTIS 609
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 10/248 (4%)
Query: 337 LQGLGRAGRIEDALKIFDNLV-----EKDYVLETSVYNAMISNFIS-VGDLDEAIKYYRC 390
LQG+G + F NL E+ + + Y ++ N +S + +D+A+ +
Sbjct: 18 LQGIGNPPTVPS----FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGD 73
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
++ + P I + KL+SA K K + + ++M GI T + FI C
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ + + K G + + LL + + + ++M E GY D +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+I+GL + AV ++++ + +G P + Y + N L ++ A L K++AAR
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 571 SNENARRF 578
N F
Sbjct: 254 IKANVVIF 261
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 103/230 (44%), Gaps = 2/230 (0%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+++DA+ +F ++V+ +N ++S + + I + + D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
I+ F + +++ AL +L +M+ G P T++S + C A+ + + +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G K + L+ L K + + ++M + G D+ Y ++NGLC G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSN 572
+ ++ + + +I++ + + L VE A LF ++ K R N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 180/396 (45%), Gaps = 26/396 (6%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+YN++L+ K ++ + +R +L++ +I GLVR + +A +
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQ 310
+ G G S N+L+ LCK + A + +K G P + TY ++ G+ +G+
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP-DAVTYGCLLHGYCSVGK 411
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
V K +L+ M+ + P+ T + LL L + GRI +A ++ + EK Y L+T N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 371 MISNFISVGDLDEAIKYYR-----------------------CLLSNNCDPDIDTYTKLI 407
++ G+LD+AI+ + L+ NNC PD+ TY+ L+
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
+ KA + A+A + EM+G+ + P + FI C G +A + K K GC
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
SL Y L++ L + + + +EM+E G S ++ Y I LC ++E+A +
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
++E + K P+ + L + A ++F
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 179/431 (41%), Gaps = 33/431 (7%)
Query: 172 EAMVIFFNWAIKQPM---IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLET 228
E V F +W K + I +++N+++RAL +D ++ ++ +G N T
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 229 LSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK 288
I+ G +A K +++ E FG + N ++ C+ + ++
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 289 --GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF----TPDCSTFDSLLQGLGR 342
G +P ++ T+N+ I+ K G+V +I M D + P+ T++ +L+G +
Sbjct: 245 EEGLVP-DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
G +EDA +F+++ E D + YN + + G EA + + P I +
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
Y L+ K ++DA ++ M G+ P T + CS G AA + +
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
+ C + +LL L + G+ + +M E GY D I++GLC G+L+
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 523 NAVLV----------------------MEESLHKGFC-PSRLIYSKLYNKLLASNKVERA 559
A+ + +++SL + C P + YS L N L + + A
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 560 YKLFLKIKAAR 570
LF ++ +
Sbjct: 544 KNLFAEMMGEK 554
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 159/388 (40%), Gaps = 45/388 (11%)
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTE--SLNVLLQCLCKRSHV 277
E ++L+ +A LVRA ++++ IQ N T+ SL ++ K +H+
Sbjct: 33 ESHGISLDATPTIARILVRA-KMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHI 91
Query: 278 RAANSYFNAVKGKIPFN---VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
A F V+ + P N V YN ++ K +V + + + MV G P TF+
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
L++ L + ++ A ++FD + EK + ++ + G D+ ++ + S
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS------- 447
P+ Y ++S+F + + D+ +M+++M +G+VP T S I LC
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 448 ------------FGPPHAAMMIYKRARKAGCKI--------------------SLSAYKL 475
G P + Y K CK+ SL +Y +
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
L L R GK + ++M + G + Y +++GLC +G L +A ++ G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLF 563
CP + Y L + + KV+ A L
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 152/401 (37%), Gaps = 58/401 (14%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K+ + D +Y +L +D +L+++ N T +I+ L + R
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK--------------RSHVRAA-----NS 282
+ +A ++ E G+G DT + N+++ LC R H AA NS
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 283 YFNAVKGKIPFN-----VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
Y V + N + TY+T++ G K G+ + K + M+ + PD ++ +
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
+ G+I A ++ ++ +K YN++I + E +
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
P+I TY I + KV DA +LDEM+ + I P+ + IE C A +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 458 YKRA-----RKAG-----------CKISLSAYKLLLMRLSRFGKCGMLL----------- 490
++ A +K G L A +LL L R + G L
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 491 -------NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
I +M + GY D +I+GL +G + A
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 112/253 (44%), Gaps = 5/253 (1%)
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN--AMI 372
K+I + E+ ++ + L RA ++ + ++ NL+ + +T + + +++
Sbjct: 24 KRIFSSPSEESHGISLDATPTIARILVRA-KMHEEIQELHNLILSSSIQKTKLSSLLSVV 82
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCD--PDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
S F +D+A ++ + S + P + Y L+ + IK R+V + +M+ G
Sbjct: 83 SIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG 142
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
I P T T I LC AA ++ + GCK + + +L+ + G L
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
+ M+ G + +Y I++ C G+ +++ ++E+ +G P + ++ + L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 551 LASNKVERAYKLF 563
KV A ++F
Sbjct: 263 CKEGKVLDASRIF 275
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 20/477 (4%)
Query: 92 LPFSANAAPTAHPYRNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANT 151
L S + A H YR N+L K D F L E L+ I S + T
Sbjct: 563 LSRSFSGASHHHHYRERLRNELHCIKF-DDAFSLFCEMLQS---------RPIPSIVDFT 612
Query: 152 GVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFML 211
V L V+AK + +VI+ ++ I D++S+ +++ + + L
Sbjct: 613 RV---LTVIAK------MNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 663
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
+L + G ++ TL + +G + R +A+ + + + FGF + N ++ L
Sbjct: 664 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 723
Query: 272 CKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
CK + A F ++ K I + TYNT+I+G S G+ ++L MV+ P+
Sbjct: 724 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 783
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
F +L+ + G + +A ++ ++ + V YN++I+ F G L +A +
Sbjct: 784 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 843
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
++S C PD+ TY LI+ F K+++V D +++ EM QG+V T + I C G
Sbjct: 844 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 903
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
+ A ++ R G + Y +LL L GK L + E++Q+S D+ Y
Sbjct: 904 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 963
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
II GLC +L+ A + KG P + Y + + L A KL ++K
Sbjct: 964 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1020
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 193/408 (47%), Gaps = 3/408 (0%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
+A +FF QP+ I + +L A + + ++ + + GI+ +L + +I
Sbjct: 54 DAFALFFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS-YFNAVKGK 290
+ R R+ A+ + G + G+ + LL C + + A S VK
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
NV YNT+I G K G++ ++L M + G D T+++LL GL +GR DA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
++ +++++ + + A+I F+ G+LDEA + Y+ ++ ++ DP+ TY +I+
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
++ DA + D M +G P+ T + I C F M +++R G +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
Y L+ + GK + L+I+ M + D+ + +++GLC G++E+A++ ++
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+ Y+ + + L ++KVE+A++LF ++ +AR +
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 190/470 (40%), Gaps = 47/470 (10%)
Query: 98 AAPTAHPYRNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSA-------IESALAN 150
A TA +R + L A F EKLR FL + + A + S
Sbjct: 10 ATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLP 69
Query: 151 TGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFM 210
+ VD + + A NL VI+F+ ++ I D++S+ +++ + + F
Sbjct: 70 SIVDFTRLLTAT----ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 211 LKMLRDLRT-----------------------------------EGITVNLETLSIVADG 235
L +L + G N+ + + DG
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH-VRAANSYFNAVKGKIPFN 294
L + + A+++ E+ G G D + N LL LC AA + +K I +
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V T+ +I + K G + + +++ + M++ P+ T++S++ GL GR+ DA K FD
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ K YN +IS F +DE +K ++ + + DI TY LI + +
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
K+ AL++ M+ + + P T + LC G +A++ + R++ I + AY
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
+++ L + K ++ + G D Y +I GLC G A
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +YN +L L +MLRD+ I ++ T + + D V+ + +A +++
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSK 307
+ + + N ++ LC + A F+ A KG P NV TYNT+I+G+ K
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP-NVVTYNTLISGFCK 328
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
V + K+ + M +GF D T+++L+ G + G++ AL IF +V + +
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
+ ++ G+++ A+ + + + I Y +I KA KV A E+ +
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+G+ P T T I LC GP A + +R ++ G ++A
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 37/300 (12%)
Query: 130 LRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPK 189
LR + +K++ +AL +T V + A+ LY+ I++ ++P
Sbjct: 771 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE-------------MIRRSVVP- 816
Query: 190 DIHSYNVILRA------LGKKKFI-DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
++ +YN ++ LG K++ D M+ ++G ++ T + + G +++RV
Sbjct: 817 NVFTYNSLINGFCIHGCLGDAKYMFDLMV-------SKGCFPDVVTYNTLITGFCKSKRV 869
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTI 301
+++F G D + N L+ C+ + A FN V + ++ TYN +
Sbjct: 870 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 929
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
+ G++ + ++E + + D T++ ++QGL R ++++A +F +L K
Sbjct: 930 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 989
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD--------IDTYTKLISAFIKA 413
+ Y MIS G EA K R + + P D YT L + IKA
Sbjct: 990 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKA 1049
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 1/348 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G +L T V +GL + + A+ + E+ D ++ LC +V A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ F + K I NV TYN++I G+ ++L M+E P+ TF +L+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A K++D ++++ + Y+++I+ F LDEA + ++S +C P+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ TY LI F KA++V + +E+ EM +G+V +T T + I+ L G A I+K
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G + Y +LL L ++GK L ++E +Q+S D+ Y +I G+C G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++E+ + KG P+ +IY+ + + E A LF ++K
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 182/395 (46%), Gaps = 7/395 (1%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGKKKFIDFMLK 212
++ + + L+ N EA+ + + QP D+ +Y ++ L K+ ID L
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQP----DLFTYGTVVNGLCKRGDIDLALS 241
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L+ + I ++ + + D L + V A+ +F + G + + N L++CLC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 273 KRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
A+ + ++ KI NV T++ +I + K G++ + +K+ + M++ PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
T+ SL+ G R+++A +F+ ++ KD YN +I F ++E ++ +R +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ TY LI +A A ++ +M+ G+ P T + ++ LC +G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A+++++ +K+ + + Y +++ + + GK +++ + G ++ +Y +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
I+G C G E A + E G P+ Y+ L
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 2/343 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I ++ +YN ++R L ++L D+ I N+ T S + D V+ ++ +A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGW 305
+++ + D + + L+ C + A F + K F NV TYNT+I G+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K +V + ++ M + G + T+++L+QGL +AG + A KIF +V +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y+ ++ G L++A+ + L + +PDI TY +I KA KV D ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ +G+ P+ T+ I C G A +++ ++ G + Y L+ R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+ +EM+ G+ D +IN L + G+LE + L M
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 627
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/540 (22%), Positives = 218/540 (40%), Gaps = 92/540 (17%)
Query: 108 NQSNKLEESKVVADLFLL-PEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYR 166
+QS K+ +K A L P LRGV+ + E N +DL LD
Sbjct: 12 SQSKKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYR-EKLSRNVLLDLKLD-------- 62
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
+A+ +F +P+ I +N +L A+ K D ++ + ++ I+ +L
Sbjct: 63 -----DAVDLFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDL 115
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
+ +I+ + R ++ A+ + G + G+ D +L+ LL C + A + +
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 287 --VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
V P N T+NT+I G + + +++ MV G PD T+ +++ GL + G
Sbjct: 176 MFVMEYQP-NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 345 RIEDALKIFDNL----VEKDYVLETSV-------------------------------YN 369
I+ AL + + +E D V+ T++ YN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
++I + G +A + ++ +P++ T++ LI AF+K K+ +A ++ DEM+ +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAA----------------------------------- 454
I P T +S I C A
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
M +++ + G + Y L+ L + G C M I+++M G D+ Y +++G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSN 572
LC G+LE A++V E P Y+ + + + KVE + LF L +K + N
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 116/258 (44%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV+ P F+ LL + + + + + + + + + YN +I+ F
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +PDI T + L++ + +++++A+ ++D+M P+T T +
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L A+ + R GC+ L Y ++ L + G + L++ ++M++
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+D+ +Y II+ LCN + +A+ + E +KG P+ + Y+ L L + A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 561 KLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 311 RLLSDMIERKINPNVVTF 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Query: 186 MIPKD----IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
MI KD + +YN +++ K K ++ +++ R++ G+ N T + + GL +A
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNT 300
A +IF G D + ++LL LCK + A F + K K+ ++ TYN
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+I G K G+V + ++ G P+ + +++ G R G E+A +F + E
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
+ + YN +I + GD + + + + S D T + +I+ R L
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625
Query: 421 EML 423
EML
Sbjct: 626 EML 628
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 186/379 (49%), Gaps = 1/379 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ + + ++ L K + L ++ + G + T V + L ++ A+ +F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
EE ++++ LCK A S FN ++ K I +V TY+++I G
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G+ K+L M+ PD TF +L+ + G++ +A ++++ ++ + +T Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N++I F L EA + + ++S C+PDI TY+ LI+++ KA++V D + + E+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G++P+T T + + C G +AA +++ G S+ Y +LL L G+
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
L I+E+MQ+S + + +Y II+G+CN ++++A + KG P + Y+ +
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 549 KLLASNKVERAYKLFLKIK 567
L + A LF K+K
Sbjct: 534 GLCKKGSLSEADMLFRKMK 552
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 37/430 (8%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F I+ +P I +N + A+ + K D +L + + GI ++ T++I+ +
Sbjct: 57 LFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNV 295
R +++ A + G + G+ DT + + L+ C V A + + V+ K ++
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR---------- 345
T +T+I G G+V + +++ MVE GF PD T+ +L L ++G
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 346 -------------------------IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
+DAL +F+ + K + Y+++I + G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
D+ K R ++ N PD+ T++ LI F+K K+ +A E+ +EM+ +GI P T T S
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I+ C H A ++ GC+ + Y +L+ + + + ++ E+ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ Y ++ G C G+L A + +E + +G PS + Y L + L + ++ +A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 561 KLFLKIKAAR 570
++F K++ +R
Sbjct: 476 EIFEKMQKSR 485
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 159/385 (41%), Gaps = 42/385 (10%)
Query: 170 GGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL 229
G A+ + +++ I + Y++++ +L K D L + ++ +GI ++ T
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-- 287
S + GL + ++ D + + L+ K + A +N +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+G P + TYN++I G+ K + + ++ + MV G PD T+ L+ +A R++
Sbjct: 344 RGIAP-DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL- 406
D +++F + K + T YN ++ F G L+ A + ++ ++S P + TY L
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 407 ----------------------------------ISAFIKARKVADALEMLDEMLGQGIV 432
I A KV DA + + +G+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML--L 490
P T I LC G A M++++ ++ GC Y +L+ + G G++ +
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR--AHLGGSGLISSV 580
Query: 491 NIWEEMQESGYSSDMEVYEYIINGL 515
+ EEM+ G+S+D + +I+ L
Sbjct: 581 ELIEEMKVCGFSADSSTIKMVIDML 605
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY-------------YRCL 391
++ DA+ +F+++++ + +N + S D + + Y
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 392 LSNNC----------------------DPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+ NC +PD T++ L++ F +V++A+ ++D M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
P TV++ I LC G A+++ R + G + Y +L RL + G +
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
L+++ +M+E + + Y +I+ LC G ++A+ + E KG + YS L
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 550 LLASNKVERAYKLF 563
L K + K+
Sbjct: 290 LCNDGKWDDGAKML 303
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 194/432 (44%), Gaps = 38/432 (8%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
+++ +FF+ +P+ I ++ +L A+ K K D ++ + ++ GI NL T +I
Sbjct: 64 DSLDLFFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK- 290
+ + R ++ A+ G + G + LL C+ V A F+ + G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
NV YNTII G K QV +L M +DG PD T++SL+ GL +GR DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR--------------------- 389
++ + +++ + +NA+I + G + EA ++Y
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 390 C--------------LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
C ++S C PD+ TY+ LI+ + K++KV +++ EM +G+V +T
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T T I+ C G + A I++R G ++ Y +LL L GK L I +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
MQ++G +D+ Y II G+C G++ +A + +G P Y+ + L
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 556 VERAYKLFLKIK 567
A LF K+K
Sbjct: 482 RREADALFRKMK 493
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 1/308 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN I+ L K K +D L +L + +GI ++ T + + GL + R A ++
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKIGQVC 312
+ D + N L+ K V A ++ ++ + ++ TY+ +I G ++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ +++ MV G PD T+ L+ G ++ ++E +K+F + ++ V T Y +I
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
+ G L+ A + +R ++ P+I TY L+ K+ AL +L +M G+
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
T I +C G A IY G + Y +++ L + G +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 493 WEEMQESG 500
+ +M+E G
Sbjct: 489 FRKMKEDG 496
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
K+ + P D+ ++N ++ A K+ + + ++ + ++ T S++ GL R+
Sbjct: 249 KREIYP-DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTI 301
+A ++FG G D + ++L+ CK V F + + + N TY +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I G+ + G++ ++I MV G P+ T++ LL GL G+IE AL I ++ +
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA--RKVADA 419
+ YN +I G++ +A Y L PDI TYT ++ K R+ ADA
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 420 LEMLDEMLGQGIVPS 434
L +M GI+P+
Sbjct: 488 L--FRKMKEDGILPN 500
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%)
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
S Y M+ N I LD+++ + ++ P I +++L+SA K +K + + ++
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M GI + T + C A+ + K G + S+ + LL R +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
L ++++M GY ++ +Y II+GLC Q++NA+ ++ G P + Y+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 546 LYNKLLASNKVERAYKL 562
L + L +S + A ++
Sbjct: 227 LISGLCSSGRWSDATRM 243
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 105/233 (45%)
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
S + +L+ R +++D+L +F ++V+ + + ++ ++S + D I +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ ++ T L++ F + +++ AL L +M+ G PS T S + C
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
+ A+ ++ + G K ++ Y ++ L + + L++ M++ G D+ Y
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+I+GLC+ G+ +A ++ + P ++ L + + +V A + +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 2/378 (0%)
Query: 157 LDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRD 216
++ V K L+ N G +A+ F D S+++ + + + ++
Sbjct: 59 VNSVLKRLW--NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
+R+ I + +T +IVA+ A + KA+++F N E G D S N +L LCK
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 277 VRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
V A F A++G+ + TYN I+ GW I + + ++L+ MVE G P+ +T++++
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 337 LQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC 396
L+G RAG+I A + F + ++D ++ Y ++ F G++ A + ++
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
P + TY +I K V +A+ M +EM+ +G P+ T I L G
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
+ +R GC+ + Y +++ S + L ++E+M +++ Y +I+G+
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 517 NIGQLENAVLVMEESLHK 534
+ E+ V+ ++ K
Sbjct: 417 VRKRSEDMVVAGNQAFAK 434
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
P TF + + AG+ + A+K+F N+ E + + +N ++ +++A +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+R L D TY +++ + ++ ALE+L EM+ +GI P+ T + ++
Sbjct: 184 FRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A + +K C+I + Y ++ G+ N+++EM G +
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
Y +I LC +ENAV++ EE + +G+ P+ Y+ L L + + R +L +++
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 189/424 (44%), Gaps = 38/424 (8%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP + ++Y++++ ++ + L +L + G N+ TLS + +G ++R+ +A+
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 247 QIFGNTEEFGFGCDTESLNVLLQ----------------------C-------------L 271
+ G+ +T + N L+ C L
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 272 CKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
CKR A + N + +GK+ V YNTII G K + + + M G P+
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T+ SL+ L GR DA ++ +++E+ + ++A+I F+ G L EA K Y
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
++ + DP I TY+ LI+ F ++ +A +M + M+ + P T + I+ C +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
M +++ + G + Y +L+ L + G C M I++EM G ++ Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKA 568
+++GLC G+LE A++V E P+ Y+ + + + KVE + LF L +K
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 569 ARSN 572
+ +
Sbjct: 532 VKPD 535
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 190/420 (45%), Gaps = 10/420 (2%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGKKKFIDFMLK 212
++ + + L+ N EAM + K QP D+ +Y V++ L K+ D
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP----DLVTYGVVVNGLCKRGDTDLAFN 242
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L + + + + + DGL + + + A+ +F E G + + + L+ CLC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 273 KRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
A+ + ++ KI +V T++ +I + K G++ + +K+ + MV+ P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
T+ SL+ G R+++A ++F+ +V K + YN +I F ++E ++ +R +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ TY LI +A A E+ EM+ G+ P+ T + ++ LC G
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
AM++++ +++ + ++ Y +++ + + GK +++ + G D+ Y +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARS 571
I+G C G E A + +E G P+ Y+ L L E + +L IK RS
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL---IKEMRS 599
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 1/344 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN I+ L K K +D L + +++ T+GI N+ T S + L R A ++ +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 254 EFGFGCDTESLNVLLQCLCKRSH-VRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVC 312
E D + + L+ K V A Y VK I ++ TY+++I G+ ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ K++ E MV PD T+++L++G + R+E+ +++F + ++ V T YN +I
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
GD D A + ++ ++S+ P+I TY L+ K K+ A+ + + + +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
P+ T IE +C G ++ G K + AY ++ R G +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
++EM+E G + Y +I G E + +++E GF
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 2/318 (0%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
++L D+ I ++ T S + D V+ ++ +A +++ + + + L+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 272 CKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
C + A F + K F +V TYNT+I G+ K +V + ++ M + G +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T++ L+QGL +AG + A +IF +V YN ++ G L++A+ +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
L + +P I TY +I KA KV D ++ + +G+ P + I C G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A ++K ++ G + Y L+ R G + +EM+ G++ D
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 511 IINGLCNIGQLENAVLVM 528
+ N L + G+L+ + L M
Sbjct: 612 VTNMLHD-GRLDKSFLDM 628
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 115/258 (44%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV+ P F LL + + + + + + + + Y+ +I+ F
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 131
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +P+I T + L++ + ++++++A+ ++D+M G P+T T +
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L AM + R GC+ L Y +++ L + G + N+ +M++
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ +Y II+GLC +++A+ + +E KG P+ + YS L + L + A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 561 KLFLKIKAARSNENARRF 578
+L + + N + F
Sbjct: 312 RLLSDMIERKINPDVFTF 329
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 169/348 (48%), Gaps = 1/348 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G +L T V +GL + + A+ + E+ D N ++ LCK H+ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ F + K I +V TY+++I+ G+ ++L M+E P+ TF +L+
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A K++D ++++ + Y+++I+ F LDEA + ++S +C P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ TY+ LI F KA++V + +E+ EM +G+V +T T T+ I A M++K
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G ++ Y +LL L + GK + ++E +Q S D+ Y +I G+C G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++E+ + KG P+ + Y+ + + E A L K+K
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 192/409 (46%), Gaps = 6/409 (1%)
Query: 164 LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L+ N EA V + +++ P D+ +Y ++ L K+ ID L +L+ + I
Sbjct: 198 LFLHNKASEA-VALVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
++ + + DGL + + + A+ +F + G D + + L+ CLC A+
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 284 F-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
+ ++ KI NV T++ +I + K G++ + +K+ + M++ PD T+ SL+ G
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
R+++A +F+ ++ KD Y+ +I F ++E ++ +R + + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
YT LI F +AR +A + +M+ G+ P+ T ++ LC G AM++++ +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
++ + + Y +++ + + GK ++ + G S ++ Y +I+G C G E
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 523 NAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARS 571
A ++++ G P+ Y+ L L E + +L IK RS
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL---IKEMRS 601
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G +L T V +GL + A+ + E + + ++ LCK H A
Sbjct: 818 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 877
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ F ++ K + NV TY+++I+ G+ ++L M+E P+ TF +L+
Sbjct: 878 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 937
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ A K+++ ++++ Y+++I+ F + L EA + ++ +C P+
Sbjct: 938 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 997
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ TY LI+ F KA++V +E+ EM +G+V +T T T+ I A M++K
Sbjct: 998 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 1057
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G ++ Y +LL L + GK + ++E +Q S D+ Y +I G+C G
Sbjct: 1058 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 1117
Query: 520 Q 520
+
Sbjct: 1118 K 1118
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 155/326 (47%), Gaps = 3/326 (0%)
Query: 164 LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L+ N EA V + +++ P D+ +Y ++ L K+ D L +L + I
Sbjct: 798 LFLHNKASEA-VALIDRMVQRGCQP-DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 855
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
N+ S V D L + + A+ +F E G + + + L+ CLC A+
Sbjct: 856 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 915
Query: 284 F-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
+ ++ KI N+ T++ +I + K G++ + +K+ E M++ P+ T+ SL+ G
Sbjct: 916 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 975
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
R+ +A ++ + ++ KD + YN +I+ F +D+ ++ +R + + T
Sbjct: 976 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 1035
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
YT LI F +AR +A + +M+ G+ P+ T ++ LC G AM++++ +
Sbjct: 1036 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 1095
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGM 488
++ + + Y +++ + + GK M
Sbjct: 1096 RSTMEPDIYTYNIMIEGMCKAGKWKM 1121
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 180/426 (42%), Gaps = 39/426 (9%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V F +K P I +N +L A+ K + ++ + ++T GI+ +L T SI +
Sbjct: 68 VDLFGDMVKSRPFPS-IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIP 292
R ++ A+ + + G+ D +L+ LL C + A + + + G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
+ T+ T+I G + + +++ MV+ G PD T+ +++ GL + G I+ AL +
Sbjct: 187 -DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS---- 408
+ + + +YN +I +D+A+ + + + PD+ TY+ LIS
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 409 -------------------------------AFIKARKVADALEMLDEMLGQGIVPSTGT 437
AF+K K+ +A ++ DEM+ + I P T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+S I C A +++ C ++ Y L+ + + + ++ EM
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
+ G + Y +I+G +NA +V ++ + G P+ L Y+ L + L + K+
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 485
Query: 558 RAYKLF 563
+A +F
Sbjct: 486 KAMVVF 491
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 150/341 (43%), Gaps = 1/341 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI + N +L I + ++ + G + T + + GL + +A+ +
Sbjct: 752 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 811
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKI 308
+ G D + ++ LCKR A + N ++ KI NV Y+T+I K
Sbjct: 812 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 871
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
+ M G P+ T+ SL+ L GR DA ++ +++E+ +
Sbjct: 872 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 931
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+A+I F+ G L +A K Y ++ + DP+I TY+ LI+ F ++ +A +ML+ M+
Sbjct: 932 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 991
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ +P+ T + I C M +++ + G + Y L+ + C
Sbjct: 992 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 1051
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
++++M G ++ Y +++GLC G+L A++V E
Sbjct: 1052 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 1092
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 189/429 (44%), Gaps = 40/429 (9%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
+A+ +F A +P I ++ +L A+ K D ++ + GI+ NL T +I
Sbjct: 666 DAIGLFGVMAQSRPF--PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 723
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KG 289
+ + R R+ A+ + G + G+ D +LN LL C + + A + + + G
Sbjct: 724 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 783
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
P + T+ T+I G + + +++ MV+ G PD T+ +++ GL + G + A
Sbjct: 784 YKP-DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 842
Query: 350 LKIFDNL----VEKDYVLETSV-------------------------------YNAMISN 374
L + + + +E + V+ ++V Y+++IS
Sbjct: 843 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 902
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
+ G +A + ++ +P++ T++ LI AF+K K+ A ++ +EM+ + I P+
Sbjct: 903 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 962
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWE 494
T +S I C A + + + C ++ Y L+ + + + ++
Sbjct: 963 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 1022
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
EM + G + Y +I+G +NA +V ++ + G P+ L Y+ L + L +
Sbjct: 1023 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 1082
Query: 555 KVERAYKLF 563
K+ +A +F
Sbjct: 1083 KLAKAMVVF 1091
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 1/319 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D+ +Y+ ++ L ++L D+ I N+ T S + D V+ ++ +A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGW 305
+++ + D + + L+ C + A F + K F NV TY+T+I G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K +V + ++ M + G + T+ +L+ G +A ++A +F +V
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN ++ G L +A+ + L + +PDI TY +I KA KV D E+
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ +G+ P+ + I C G A + K+ ++ G + Y L+ R G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 486 CGMLLNIWEEMQESGYSSD 504
+ +EM+ G++ D
Sbjct: 589 REASAELIKEMRSCGFAGD 607
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 173/428 (40%), Gaps = 44/428 (10%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
++ IK+ + P DI +Y+ ++ +D M + ++ N+ T S + G
Sbjct: 350 LYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNV 295
+A+RV + +++F + G +T + L+ + A F V + N+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
TYN ++ G K G++ + + E + PD T++ +++G+ +AG++ED ++F N
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
L K YN MIS F G +EA + + + P+ TY LI A ++
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 416 VADALEMLDEMLGQGIVPSTGTV---------------------TSFIEPLCSFGPPHAA 454
+ E++ EM G T+ F E +CS
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICS-SESCGE 647
Query: 455 MMIYKRARKAGCK--------------------ISLSAYKLLLMRLSRFGKCGMLLNIWE 494
Y+ + G S+ + LL +++ K ++++ E
Sbjct: 648 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 707
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
+M+ G S ++ Y +IN C +L A+ ++ + + G+ P + + L N N
Sbjct: 708 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 767
Query: 555 KVERAYKL 562
++ A L
Sbjct: 768 RISDAVAL 775
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV+ P F+ LL + + + E + + + + + Y+ I+ F
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +PDI T + L++ + +++++DA+ ++D+M+ G P T T T+
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L A+ + + + GC+ L Y ++ L + G + L++ ++M++
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+D+ +Y II+GLC +++A+ + E +KG P YS L + L + A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 561 KLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 314 RLLSDMIERKINPNVVTF 331
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 176/425 (41%), Gaps = 43/425 (10%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ + + D + + + + G+ N+ T +I+ DGL + ++ KA+ +F
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQ 310
+ D + N++++ +CK V F ++KG P NV YNT+I+G+ + G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP-NVIAYNTMISGFCRKGS 553
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE----------------DALKI-- 352
+ +L+ M EDG P+ T+++L++ R G E DA I
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 353 ---FDNLVEK-------------------DYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
F +EK + E+ Y ++ +S +LD+AI +
Sbjct: 614 SSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDYREVLRTGLSDIELDDAIGLFGV 673
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ + P I ++KL+SA K K + ++M GI + T I C
Sbjct: 674 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 733
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ + + K G + + LL + + + ++M E GY D +
Sbjct: 734 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 793
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+I+GL + AV +++ + +G P + Y + N L + A L K++AA+
Sbjct: 794 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 853
Query: 571 SNENA 575
N
Sbjct: 854 IEANV 858
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
+PDI T L++ F +++DA+ ++D+M+ G P T T T+ I L A+
Sbjct: 750 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 809
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
+ R + GC+ L Y ++ L + G + LN+ +M+ + +++ +Y +I+ LC
Sbjct: 810 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 869
Query: 517 NIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENAR 576
++A+ + E +KG P+ + YS L + L + A +L + + N N
Sbjct: 870 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 929
Query: 577 RF 578
F
Sbjct: 930 TF 931
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 101/240 (42%), Gaps = 10/240 (4%)
Query: 337 LQGLGRAGRIEDALKIFDNLV-----EKDYVLETSVYNAMISNFIS-VGDLDEAIKYYRC 390
LQG+G + F NL E+ + + Y ++ N +S + +D+A+ +
Sbjct: 18 LQGIGNPPTVPS----FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGD 73
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
++ + P I + KL+SA K K + + ++M GI T + FI C
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ + + K G + + LL + + + ++M E GY D +
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+I+GL + AV ++++ + +G P + Y + N L ++ A L K++ +
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 198/434 (45%), Gaps = 15/434 (3%)
Query: 142 SAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIF--FNWAIKQPMIPKDIHSYNVILR 199
S++ESAL TG++ S+++V R L M++ F WA +P ++ ++
Sbjct: 86 SSLESALDETGIEPSVELVHALFDR--LSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 200 ALGKKKFIDFMLKMLRD-LRT-EGIT-VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG 256
+L K + + ++ D +R+ EG V+ +T ++ RA V +AI+ F +
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 257 FGCDTES----LNVLLQCLCKRSHVRAANSYFNAVKGKIPFN----VATYNTIIAGWSKI 308
C + + L VLL LCK HVR A+ Y + G + N V +N ++ GW +
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
++ Q +K+ E M P T+ +L++G R R++ A+++ + + + + V+
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N +I G L EA+ P I TY L+ F KA + A ++L M+
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G+ P+T T F + M +Y + +AG Y L+L L GK +
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ + +EM+ G D+ +I+ LC + LE A + ++ +G P + + + N
Sbjct: 444 AMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDN 503
Query: 549 KLLASNKVERAYKL 562
L + + A +L
Sbjct: 504 GLRSKGMSDMAKRL 517
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 7/245 (2%)
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYV----LETSVYNAMISNFISVGDLDEAIKY 387
TF L++ RAG ++ A++ F+ + V E + ++ G + EA Y
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 388 YRCL---LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
+ + +N P + + L++ + ++RK+ A ++ +EM + P+ T + IE
Sbjct: 235 LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
C AM + + + A +I+ + ++ L G+ L + E
Sbjct: 295 YCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPT 354
Query: 505 MEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFL 564
+ Y ++ C G L A +++ + +G P+ Y+ + NK E L+
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 565 KIKAA 569
K+ A
Sbjct: 415 KLIEA 419
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 181/373 (48%), Gaps = 4/373 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR-VYKAIQIFGNT 252
+++++++ + ID L ++ + G + + + V D +R++R + A +F
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
E + + N+L++ C ++ A + F+ + KG +P NV TYNT+I G+ K+ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYNTLIDGYCKLRK 255
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ K+L +M G P+ +++ ++ GL R GR+++ + + + Y L+ YN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I + G+ +A+ + +L + P + TYT LI + KA + A+E LD+M +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
+ P+ T T+ ++ G + A + + G S+ Y L+ GK +
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
+ E+M+E G S D+ Y +++G C ++ A+ V E + KG P + YS L
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 551 LASNKVERAYKLF 563
+ + A L+
Sbjct: 496 CEQRRTKEACDLY 508
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 170/384 (44%), Gaps = 1/384 (0%)
Query: 184 QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY 243
+ + ++ +YN+++R ID L + + T+G N+ T + + DG + +++
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTII 302
++ + G + S NV++ LC+ ++ + + + + TYNT+I
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G+ K G Q + M+ G TP T+ SL+ + +AG + A++ D + +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
Y ++ F G ++EA + R + N P + TY LI+ K+ DA+ +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
L++M +G+ P + ++ + C A+ + + + G K Y L+
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
+ +++EEM G D Y +IN C G LE A+ + E + KG P +
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 543 YSKLYNKLLASNKVERAYKLFLKI 566
YS L N L ++ A +L LK+
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKL 581
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 190/459 (41%), Gaps = 91/459 (19%)
Query: 165 YRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITV 224
+ GN+ + + F+ + +P ++ +YN ++ K + ID K+LR + +G+
Sbjct: 217 FAGNI--DVALTLFDKMETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA---- 280
NL + ++V +GL R R+ + + G+ D + N L++ CK + A
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 281 -------------------NSYFNA--------------VKGKIPFNVATYNTIIAGWSK 307
+S A V+G P N TY T++ G+S+
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP-NERTYTTLVDGFSQ 392
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + + ++L M ++GF+P T+++L+ G G++EDA+ + +++ EK +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y+ ++S F D+DEA++ R ++ PD TY+ LI F + R+ +A ++ +EML
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR----- 482
G+ P T T+ I C G A+ ++ + G + Y +L+ L++
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 483 ------------------------------------------FGKCGMLL---NIWEEMQ 497
F GM+ ++E M
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ D Y +I+G C G + A + +E + GF
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 119/284 (41%), Gaps = 36/284 (12%)
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR-IEDALKIFD 354
+ ++ ++ +S++ + + I+ GF P +++++L R+ R I A +F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
++E YN +I F G++D A+ + + + C P++ TY LI + K R
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
K+ D ++L M +G+ P+ L +Y
Sbjct: 255 KIDDGFKLLRSMALKGLEPN-----------------------------------LISYN 279
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
+++ L R G+ + + EM GYS D Y +I G C G A+++ E L
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
G PS + Y+ L + + + + RA + +++ N R +
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/409 (19%), Positives = 164/409 (40%), Gaps = 52/409 (12%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
++ + P I +Y ++ ++ K ++ ++ L +R G+ N T + + DG +
Sbjct: 337 LRHGLTPSVI-TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNT 300
+ +A ++ + GF + N L+ C + A + +K K + +V +Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+++G+ + V + ++ MVE G PD T+ SL+QG R ++A +++ ++
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
+ Y A+I+ + GDL++A++ + ++ PD+ TY+ LI+ K + +A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 421 EML--------------------------------------------------DEMLGQG 430
+L + MLG+
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
P I C G A +YK K+G + L+ L + GK L
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
++ + S S+ E + ++ G ++ + V+ E GF P+
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 196/419 (46%), Gaps = 7/419 (1%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGKKKFIDFMLK 212
+ + + L+R N EA+ + +K QP D+ +Y +++ L K+ ID L
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP----DLVTYGIVVNGLCKRGDIDLALS 242
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L+ + I + + + D L + V A+ +F + G + + N L++CLC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 273 KRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
A+ + ++ KI NV T++ +I + K G++ + +K+ + M++ PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
T+ SL+ G R+++A +F+ ++ KD YN +I F +DE ++ +R +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ TYT LI F +AR+ +A + +M+ G++P T + ++ LC+ G
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A+++++ +++ + + Y +++ + + GK +++ + G ++ Y +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
++G C G E A + E +G P Y+ L L + +L ++++ R
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 178/379 (46%), Gaps = 1/379 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D ++N ++ L + + ++ + +G +L T IV +GL + + A+ +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
E+ N ++ LC +V A + F + K I NV TYN++I
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G+ ++L M+E P+ TF +L+ + G++ +A K++D ++++ + Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+++I+ F LDEA + ++S +C P++ TY LI F KA++V + +E+ EM
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G+V +T T T+ I A +++K+ G + Y +LL L GK
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
L ++E +Q S D+ Y +I G+C G++E+ + KG P+ + Y+ + +
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 549 KLLASNKVERAYKLFLKIK 567
E A LF ++K
Sbjct: 545 GFCRKGLKEEADALFREMK 563
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 144/313 (46%), Gaps = 3/313 (0%)
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQ 310
+ G + + ++L+ C C+RS + A + + G P ++ T N+++ G+ +
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP-DIVTLNSLLNGFCHGNR 166
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ ++ MVE G+ PD TF++L+ GL R R +A+ + D +V K + Y
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+++ GD+D A+ + + +P + Y +I A + V DAL + EM +G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
I P+ T S I LC++G A + + ++ + L+ + GK
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
+++EM + D+ Y +ING C +L+ A + E + K P+ + Y+ L
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 551 LASNKVERAYKLF 563
+ +V+ +LF
Sbjct: 407 CKAKRVDEGMELF 419
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 150/343 (43%), Gaps = 2/343 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I ++ +YN ++R L ++L D+ I N+ T S + D V+ ++ +A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGW 305
+++ + D + + L+ C + A F + K F NV TYNT+I G+
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K +V + ++ M + G + T+ +L+ G +A ++A +F +V + +
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y+ ++ + G ++ A+ + L + +PDI TY +I KA KV D ++
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ +G+ P+ T T+ + C G A +++ ++ G Y L+ R G
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+ EM+ + D + N L + G+L+ + L M
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVTNMLHD-GRLDKSFLKM 628
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV+ P F LL + + + + + + + + Y+ +I+ F
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +PDI T L++ F +++DA+ ++ +M+ G P + T +
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L A+ + R GC+ L Y +++ L + G + L++ ++M++
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ +Y II+ LCN + +A+ + E +KG P+ + Y+ L L + A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 561 KLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 312 RLLSDMIERKINPNVVTF 329
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 102/230 (44%), Gaps = 2/230 (0%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+++DA+ +F ++V+ ++ ++S + D I + + ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
LI+ F + +++ AL +L +M+ G P T+ S + C A+ + + +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G + + L+ L R + + + + M G D+ Y ++NGLC G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI--KAARSN 572
+ ++++ P +IY+ + + L V A LF ++ K R N
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 185/392 (47%), Gaps = 2/392 (0%)
Query: 177 FFNWAI-KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
FFNWA + K H YN ++ GK + D ++ +++ + +++ET +I+
Sbjct: 136 FFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRR 195
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
VRA +A+ F E++G D + ++++ L ++ A S+F+++K + +V
Sbjct: 196 YVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV 255
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
Y ++ GW + G++ + +K+ + M G P+ T+ ++ L R G+I A +F +
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+++ +N ++ + G ++ ++ Y + C+PD TY LI A +
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ +A+++L+ M+ + + T + + + A +Y + +A C+ + Y +
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL-HK 534
L+ M+L + +EM + ++ Y ++ C +G NA + +E + K
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
PS +Y + +L + ++++ +L K+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 1/278 (0%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
YN +I K+ Q +++ M TF L++ RAG +A+ F+ +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+ V + ++ +ISN EA ++ L + +PD+ YT L+ + +A +++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
+A ++ EM GI P+ T + I+ LC G A ++ +GC + + L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
+ G+ +L ++ +M++ G D Y ++I C LENAV V+ + K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENA 575
+ ++ ++ + V A++++ K+ A+ N
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 177/382 (46%), Gaps = 1/382 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D++++N+++ + L +L + G + T+ + +G R RV A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+ E G+ D + N ++ LCK V A +F ++ K I NV TY ++ G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ ++L M++ TP+ T+ +LL + G++ +A ++F+ +V +
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y+++I+ +DEA + + ++S C D+ +Y LI+ F KA++V D +++ E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +G+V +T T + I+ G A + + G + Y +LL L G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
L I+E+MQ+ D+ Y +I G+C G++E A + KG P + Y+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 546 LYNKLLASNKVERAYKLFLKIK 567
+ + L + L+ K+K
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMK 497
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 17/301 (5%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
IK+ + P ++ +Y+ +L A K + ++ ++ I ++ T S + +GL R
Sbjct: 252 IKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNT 300
+ +A Q+F G D S N L+ CK V F + + + N TYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+I G+ + G V + ++ M G +PD T++ LL GL G +E AL IF+++ +++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
L+ Y +I G ++EA + L PDI TYT ++S + +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 421 EMLDEMLGQGIVP-----STGTVTSFIEPL-----CSFGPPHAAMMIYKRARKAGCKISL 470
+ +M +G++ S G +T E + C + P + K + CK +L
Sbjct: 491 ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS-----LLKDIKSGVCKKAL 545
Query: 471 S 471
S
Sbjct: 546 S 546
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 35/218 (16%)
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK------------------------- 415
L++AI + ++ + P I + +L+SA +K +K
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 416 ----------VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
V+ AL +L +ML G P T+ S + C A+ + + + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
K + AY ++ L + + + ++E++ G ++ Y ++NGLCN + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 526 LVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
++ + + K P+ + YS L + + + KV A +LF
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF--NAVKGKIPFNVATYNTII 302
AI +F E G + S N+++ +C+ ++ A+ +KG P +V +Y+T++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVISYSTVV 731
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G+ + G++ ++ K++E M G P+ + S++ L R ++ +A + F ++ + +
Sbjct: 732 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+T VY +I F GD+ A K++ + S + PD+ TYT +IS F + + +A ++
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
EM +G+ P + T T I C G A ++ +AGC ++ Y L+ L +
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
G + EM + G ++ Y I+NGLC G +E AV ++ E G +
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 543 YSKLYNKLLASNKVERAYKLF 563
Y+ L + S ++++A ++
Sbjct: 972 YTTLMDAYCKSGEMDKAQEIL 992
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 176/390 (45%), Gaps = 2/390 (0%)
Query: 191 IHSYNVILRALGKKKF-IDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+ S NV L L K + + + R+ G+ N+ + +IV + + R+ +A +
Sbjct: 653 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 712
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
E G+ D S + ++ C+ + +K K + N Y +II +I
Sbjct: 713 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 772
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
++ + ++ M+ G PD + +L+ G + G I A K F + +D + Y
Sbjct: 773 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 832
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
A+IS F +GD+ EA K + + +PD T+T+LI+ + KA + DA + + M+
Sbjct: 833 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
G P+ T T+ I+ LC G +A + K G + ++ Y ++ L + G
Sbjct: 893 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ + E + +G ++D Y +++ C G+++ A +++E L KG P+ + ++ L N
Sbjct: 953 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Query: 549 KLLASNKVERAYKLFLKIKAARSNENARRF 578
+E KL + A NA F
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 166/391 (42%), Gaps = 37/391 (9%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F+ I+Q ++P D Y ++ K+ I K ++ + IT ++ T + + G
Sbjct: 782 FSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVA 296
+ + +A ++F G D+ + L+ CK H++ A N ++ NV
Sbjct: 841 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T+I G K G + ++L M + G P+ T++S++ GL ++G IE+A+K+
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+T Y ++ + G++D+A + + +L P I T+ L++ F +
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
D ++L+ ML +GI P+ T S ++ C AA IYK
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK----------------- 1063
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+M G D + YE ++ G C ++ A + +E KGF
Sbjct: 1064 ------------------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
S YS L L K A ++F +++
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 3/376 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ SYN+++ + + I +L + +G T ++ + S V +G R + K ++
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ G ++ ++ LC+ + A F+ + +G +P + Y T+I G+ K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCK 806
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + K M TPD T+ +++ G + G + +A K+F + K ++
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
+ +I+ + G + +A + + ++ C P++ TYT LI K + A E+L EM
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ P+ T S + LC G A+ + AG Y L+ + G+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
I +EM G + + ++NG C G LE+ ++ L KG P+ ++ L
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 548 NKLLASNKVERAYKLF 563
+ N ++ A ++
Sbjct: 1047 KQYCIRNNLKAATAIY 1062
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 146/325 (44%), Gaps = 1/325 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D+ +Y I+ + + K+ ++ +G+ + T + + +G +A + A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGW 305
++ + + G + + L+ LCK + +AN + + K + N+ TYN+I+ G
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K G + + K++ G D T+ +L+ ++G ++ A +I ++ K
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+N +++ F G L++ K +L+ P+ T+ L+ + + A + +
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +G+ P T + ++ C A +++ + G +S+S Y +L+ + K
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEY 510
++++M+ G ++D E++++
Sbjct: 1125 FLEAREVFDQMRREGLAADKEIFDF 1149
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 167 GNLGGEAMVIFFNWAIK-QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
G+L ++ W I QP +I +YN I+ L K I+ +K++ + G+ +
Sbjct: 913 GDLDSANELLHEMWKIGLQP----NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
T + + D ++ + KA +I G + NVL+ C + N
Sbjct: 969 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1028
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ K I N T+N+++ + + I + M G PD T+++L++G +A
Sbjct: 1029 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 1088
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+++A +F + K + + S Y+ +I F+ EA + + + D + +
Sbjct: 1089 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIV 432
K ++ ++ +DE++ +V
Sbjct: 1149 FFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 36/270 (13%)
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE------------------------ 364
D FD Q L G + +A ++F+ ++ VL
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676
Query: 365 ------------TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
+ YN +I +G + EA + PD+ +Y+ +++ + +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
++ ++++ M +G+ P++ S I LC A + + G
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y L+ + G + EM + D+ Y II+G C IG + A + E
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
KG P + +++L N + ++ A+++
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRV 886
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF--NAVKGKIPFNVATYNTII 302
AI +F E G + S N+++ +C+ ++ A+ +KG P +V +Y+T++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP-DVISYSTVV 731
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G+ + G++ ++ K++E M G P+ + S++ L R ++ +A + F ++ + +
Sbjct: 732 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+T VY +I F GD+ A K++ + S + PD+ TYT +IS F + + +A ++
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
EM +G+ P + T T I C G A ++ +AGC ++ Y L+ L +
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
G + EM + G ++ Y I+NGLC G +E AV ++ E G +
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 543 YSKLYNKLLASNKVERAYKLF 563
Y+ L + S ++++A ++
Sbjct: 972 YTTLMDAYCKSGEMDKAQEIL 992
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 176/390 (45%), Gaps = 2/390 (0%)
Query: 191 IHSYNVILRALGKKKF-IDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+ S NV L L K + + + R+ G+ N+ + +IV + + R+ +A +
Sbjct: 653 VDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 712
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
E G+ D S + ++ C+ + +K K + N Y +II +I
Sbjct: 713 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 772
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
++ + ++ M+ G PD + +L+ G + G I A K F + +D + Y
Sbjct: 773 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 832
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
A+IS F +GD+ EA K + + +PD T+T+LI+ + KA + DA + + M+
Sbjct: 833 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
G P+ T T+ I+ LC G +A + K G + ++ Y ++ L + G
Sbjct: 893 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ + E + +G ++D Y +++ C G+++ A +++E L KG P+ + ++ L N
Sbjct: 953 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Query: 549 KLLASNKVERAYKLFLKIKAARSNENARRF 578
+E KL + A NA F
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 166/391 (42%), Gaps = 37/391 (9%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F+ I+Q ++P D Y ++ K+ I K ++ + IT ++ T + + G
Sbjct: 782 FSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVA 296
+ + +A ++F G D+ + L+ CK H++ A N ++ NV
Sbjct: 841 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T+I G K G + ++L M + G P+ T++S++ GL ++G IE+A+K+
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+T Y ++ + G++D+A + + +L P I T+ L++ F +
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
D ++L+ ML +GI P+ T S ++ C AA IYK
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK----------------- 1063
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+M G D + YE ++ G C ++ A + +E KGF
Sbjct: 1064 ------------------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
S YS L L K A ++F +++
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 164/376 (43%), Gaps = 3/376 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ SYN+++ + + I +L + +G T ++ + S V +G R + K ++
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ G ++ ++ LC+ + A F+ + +G +P + Y T+I G+ K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCK 806
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + K M TPD T+ +++ G + G + +A K+F + K ++
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
+ +I+ + G + +A + + ++ C P++ TYT LI K + A E+L EM
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ P+ T S + LC G A+ + AG Y L+ + G+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
I +EM G + + ++NG C G LE+ ++ L KG P+ ++ L
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 548 NKLLASNKVERAYKLF 563
+ N ++ A ++
Sbjct: 1047 KQYCIRNNLKAATAIY 1062
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 146/325 (44%), Gaps = 1/325 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D+ +Y I+ + + K+ ++ +G+ + T + + +G +A + A
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGW 305
++ + + G + + L+ LCK + +AN + + K + N+ TYN+I+ G
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K G + + K++ G D T+ +L+ ++G ++ A +I ++ K
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+N +++ F G L++ K +L+ P+ T+ L+ + + A + +
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +G+ P T + ++ C A +++ + G +S+S Y +L+ + K
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEY 510
++++M+ G ++D E++++
Sbjct: 1125 FLEAREVFDQMRREGLAADKEIFDF 1149
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 167 GNLGGEAMVIFFNWAIK-QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
G+L ++ W I QP +I +YN I+ L K I+ +K++ + G+ +
Sbjct: 913 GDLDSANELLHEMWKIGLQP----NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 968
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
T + + D ++ + KA +I G + NVL+ C + N
Sbjct: 969 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 1028
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ K I N T+N+++ + + I + M G PD T+++L++G +A
Sbjct: 1029 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 1088
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+++A +F + K + + S Y+ +I F+ EA + + + D + +
Sbjct: 1089 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIV 432
K ++ ++ +DE++ +V
Sbjct: 1149 FFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 36/270 (13%)
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE------------------------ 364
D FD Q L G + +A ++F+ ++ VL
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676
Query: 365 ------------TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
+ YN +I +G + EA + PD+ +Y+ +++ + +
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
++ ++++ M +G+ P++ S I LC A + + G
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y L+ + G + EM + D+ Y II+G C IG + A + E
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
KG P + +++L N + ++ A+++
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRV 886
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 193/433 (44%), Gaps = 39/433 (9%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V F I+ +P I +N + A+ K K + +L + + + ++GI ++ TLSI+ +
Sbjct: 73 VDLFRDMIQSRPLPTVI-DFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIP 292
R +++ A G + G+ DT N LL LC V A + + G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP------------------------ 328
+ T NT++ G G+V +++ MVE GF P
Sbjct: 192 -TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 329 -----------DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
D + ++ GL + G +++A +F+ + K + + YN +I F +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
G D+ K R ++ P++ T++ LI +F+K K+ +A ++L EM+ +GI P+T T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
S I+ C A+ + GC + + +L+ + + L ++ EM
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G ++ Y ++ G C G+LE A + +E + + P + Y L + L + ++E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 558 RAYKLFLKIKAAR 570
+A ++F KI+ ++
Sbjct: 491 KALEIFGKIEKSK 503
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 173/347 (49%), Gaps = 1/347 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G N T V + + ++ + A+++ EE D ++++ LCK + A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ FN ++ K ++ TYNT+I G+ G+ K+L M++ +P+ TF L+
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A ++ ++++ T YN++I F L+EAI+ ++S CDPD
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
I T+ LI+ + KA ++ D LE+ EM +G++ +T T + ++ C G A +++
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ + +YK+LL L G+ L I+ ++++S D+ +Y II+G+CN
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
++++A + KG Y+ + ++L + + +A LF K+
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 182/396 (45%), Gaps = 2/396 (0%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V+ + ++ P ++ +Y +L + K +++LR + I ++ SI+ D
Sbjct: 213 VVLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH-VRAANSYFNAVKGKIPF 293
GL + + A +F E GF D + N L+ C A + +K KI
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
NV T++ +I + K G++ + ++L+ M++ G P+ T++SL+ G + R+E+A+++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D ++ K + +N +I+ + +D+ ++ +R + + TY L+ F ++
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ A ++ EM+ + + P + ++ LC G A+ I+ + K+ ++ + Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+++ + K +++ + G D Y +I+ LC L A ++ +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+G P L Y+ L L + A +L ++K++
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 175/393 (44%), Gaps = 4/393 (1%)
Query: 170 GGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL 229
G A+ + +++ I D Y++I+ L K +D + ++ +G ++ T
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-- 287
+ + G A R ++ + + + + +VL+ K +R A+ +
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+G P N TYN++I G+ K ++ + ++++ M+ G PD TF+ L+ G +A RI+
Sbjct: 362 RGIAP-NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
D L++F + + + T YN ++ F G L+ A K ++ ++S PDI +Y L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
++ ALE+ ++ + G I +C+ A ++ G K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ AY +++ L R ++ +M E G++ D Y +I A +
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+EE GF P+ + K+ +L+S ++++++
Sbjct: 601 IEEMKSSGF-PADVSTVKMVINMLSSGELDKSF 632
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M++ P F+ L + + + E L + + K + MI+ F
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A ++ +PD + L++ +V++ALE++D M+ G P+ T+ +
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
+ LC G A+++ R + G + + Y +L + + G+ + + + +M+E
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
D Y II+GLC G L+NA + E KGF + Y+ L + + +
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 561 KLFLKIKAARSNENARRF 578
KL + + + N F
Sbjct: 319 KLLRDMIKRKISPNVVTF 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%)
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
D+A+ +R ++ + P + + +L SA K ++ L + +M +GI S T++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I C A + K G + + LL L + L + + M E G+
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
+ ++NGLC G++ +AV++++ + GF P+ + Y + N + S + A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 562 LFLKIK 567
L K++
Sbjct: 250 LLRKME 255
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 101/230 (43%), Gaps = 2/230 (0%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+ +DA+ +F ++++ + +N + S + + + + S I T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
+I+ F + RK++ A + +++ G P T + + LC A+ + R +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G K +L L+ L GK + + + M E+G+ + Y ++N +C GQ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSN 572
+ ++ + + + YS + + L ++ A+ LF ++IK +++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 174/374 (46%), Gaps = 36/374 (9%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP I +YN IL L K +D LK+ +++ + NL T +I+ D L RA ++ A
Sbjct: 340 IPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAF 397
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
++ + ++ G + ++N+++ LCK + A + F + K
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK---------------- 441
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
VC TPD TF SL+ GLG+ GR++DA K+++ +++ D +
Sbjct: 442 ----VC--------------TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
VY ++I NF + G ++ K Y+ +++ NC PD+ + KA + M +E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
+ VP + + I L G + ++ ++ GC + AY +++ + GK
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ EEM+ G+ + Y +I+GL I +L+ A ++ EE+ K + +IYS L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 547 YNKLLASNKVERAY 560
+ +++ AY
Sbjct: 664 IDGFGKVGRIDEAY 677
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 170/387 (43%), Gaps = 35/387 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
+F W ++ +P SYN +L + + + D + ++L ++ G ++ T + G
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVA 296
V+A ++ + + +F F R A S
Sbjct: 144 VKANKLREGYDVVQMMRKFKF--------------------RPAFS-------------- 169
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
Y T+I +S + M + + M E G+ P F +L++G + GR++ AL + D +
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ +YN I +F VG +D A K++ + +N PD TYT +I KA ++
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+A+EM + + VP T + I S G A + +R R G S+ AY +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
L L + GK L ++EEM++ + ++ Y +I+ LC G+L+ A + + G
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLF 563
P+ + + ++L S K++ A +F
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMF 435
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 187/424 (44%), Gaps = 35/424 (8%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K + DI YNV + + GK +D K ++ G+ + T + + L +A R
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 242 VYKAIQIFGNTEE--------------FGFGCDTE---------------------SLNV 266
+ +A+++F + E+ G+G + + N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 267 LLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
+L CL K V A F +K N++TYN +I + G++ ++ ++M + G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
P+ T + ++ L ++ ++++A +F+ + K + + ++I VG +D+A K
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
Y +L ++C + YT LI F + D ++ +M+ Q P + ++++ +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDME 506
G P +++ + +Y +L+ L + G ++ M+E G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 507 VYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
Y +I+G C G++ A ++EE KGF P+ + Y + + L ++++ AY LF +
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 567 KAAR 570
K+ R
Sbjct: 649 KSKR 652
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 181/405 (44%), Gaps = 5/405 (1%)
Query: 180 WAIKQPMIPKDIHSYNVILRALGKKKF----IDFMLKMLRDLRTEGITVNLETLSIVADG 235
+ + + M+ D + +++ +L K F + K+ +D+ + + +L+ L+ D
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFN 294
+ +A K +F + F D S ++L+ L K F ++K + +
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
YN +I G+ K G+V + ++LE M GF P T+ S++ GL + R+++A +F+
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
K L +Y+++I F VG +DEA L+ P++ T+ L+ A +KA
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
++ +AL M P+ T I LC + A + ++ +K G K S +Y
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYT 766
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
++ L++ G +++ + +G D Y +I GL N + +A + EE+ +
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFW 579
G L + L ++ +E+A + ++ +A R W
Sbjct: 827 GLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW 871
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 180/395 (45%), Gaps = 1/395 (0%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
I+ L G+DL+ ++V + + R + I +KQ + YN IL LGK
Sbjct: 96 IKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGK 155
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ + ++ ++ VN +T ++ + A +V +A+ +F +EFG D +
Sbjct: 156 MRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVA 215
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
+ LL LC+ HV A + F + + + ++ N I+ GW +G V + K+ + ++
Sbjct: 216 FHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIA 275
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
PD ++ +++ L + G++ A++++ + + + + N +I + E
Sbjct: 276 SKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPE 335
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A++ +R + DP++ TY L+ K R+ E+++EM +G S VT F
Sbjct: 336 ALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT-FSY 394
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
L ++ +R K C+++ Y L+ ++ K + IW EM+ SG
Sbjct: 395 LLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
D Y I+GL G++ A+ +E + KG P
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 103/230 (44%), Gaps = 1/230 (0%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
++ +L LG+ R E+ ++FD + ++D + Y +++ + + +DEA+ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
D D+ + L+ + + V A E L + + + C G H
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 453 AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
A +K + C+ + +Y ++ L++ GK G + ++ M ++ + D+++ +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 513 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
+ LC ++ A+ V E KG P+ + Y+ L L + E+ ++L
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 168/348 (48%), Gaps = 1/348 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G N T V + + ++ + A+++ EE D ++++ LCK + A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ FN ++ K I N+ TYN +I G+ G+ K+L M++ P+ TF L+
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A ++ ++ + +T Y ++I F LD+A + ++S CDP+
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
I T+ LI+ + KA ++ D LE+ +M +G+V T T + I+ C G + A +++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
++ YK+LL L G+ L I+E++++S D+ +Y II+G+CN
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++++A + KG P Y+ + L + A LF K++
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 196/436 (44%), Gaps = 40/436 (9%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
+A+ +F + +P+ P I ++ + A+ K K D +L + + + +GI NL TLSI
Sbjct: 71 DAIDLFRDMIHSRPL-PTVI-DFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KG 289
+ + R +++ A G + G+ +T + + L+ LC V A + + G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL------------ 337
P ++ T NT++ G G+ + +++ MVE G P+ T+ +L
Sbjct: 189 HKP-DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 338 -----------------------QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
GL + G +++A +F+ + K YN +I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
F + G D+ K R ++ +P++ T++ LI +F+K K+ +A E+ EM+ +GI P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWE 494
T T TS I+ C A + GC ++ + +L+ + + L ++
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
+M G +D Y +I G C +G+L A + +E + + P+ + Y L + L +
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 555 KVERAYKLFLKIKAAR 570
+ E+A ++F KI+ ++
Sbjct: 488 ESEKALEIFEKIEKSK 503
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 158/344 (45%), Gaps = 4/344 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +I +YN+++ D K+LRD+ I N+ T S++ D V+ ++ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
++ G DT + L+ CK +H+ AN + + KG P N+ T+N +I G
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP-NIRTFNILING 412
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K ++ ++ M G D T+++L+QG G++ A ++F +V +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y ++ G+ ++A++ + + + + DI Y +I A KV DA ++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+ +G+ P T I LC GP A +++++ + G Y +L+ G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+ + EE++ G+S D + +I+ L + G+L+ + L M
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSFLDM 635
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 165/369 (44%), Gaps = 3/369 (0%)
Query: 170 GGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL 229
G A+ + +++ I D Y++I+ L K +D + ++ +GIT N+ T
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-- 287
+I+ G A R ++ + + + + +VL+ K +R A +
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+G P + TY ++I G+ K + + ++++ MV G P+ TF+ L+ G +A RI+
Sbjct: 362 RGIAP-DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
D L++F + + V +T YN +I F +G L+ A + ++ ++S P+I TY L+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
+ ALE+ +++ + G I +C+ A ++ G K
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ Y +++ L + G ++ +M+E G++ D Y +I G +V +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 528 MEESLHKGF 536
+EE GF
Sbjct: 601 IEELKRCGF 609
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 131/288 (45%)
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
I N+ T + +I + + ++C + +++ G+ P+ TF +L+ GL GR+ +AL
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
++ D +VE + + N +++ G EA+ ++ C P+ TY +++
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
K+ + A A+E+L +M + I + I+ LC G A ++ G ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
Y +L+ G+ + +M + + ++ + +I+ G+L A + +E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+H+G P + Y+ L + N +++A ++ + + + N R F
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 36/273 (13%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D +Y ++ K+ +D +M+ + ++G N+ T +I+ +G +A R+ +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATY------- 298
++F G DT + N L+Q C+ + A F V K+P N+ TY
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 299 ----------------------------NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
N II G +V + ++ G P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T++ ++ GL + G + +A +F + E + + YN +I + GD +++K
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
L D T +I R L+ML
Sbjct: 604 LKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 172/400 (43%), Gaps = 20/400 (5%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP +I+S+N++++ + F L L G ++ T + + GL R+ +A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 247 QIFGNTEEFGF-------------GCD--TESLNVLLQCLCKRSHVRAANSYFNAVKGK- 290
+FG E GF G + N L+ LC V A + N + GK
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
+ +V TY TI+ G K+G +L M E PD + +++ L + G DA
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+F ++EK YN MI F S G +A + R ++ +PD+ T+ LISA
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
+K K+ +A ++ DEML + I P T T S I C A ++ +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DV 432
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ ++ R + + + E+ G ++ Y +I+G C + L A + +E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+ G CP + + L + K+E A +LF I+ ++
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 185/435 (42%), Gaps = 46/435 (10%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V F+ ++ + P I ++N ++ L + + ++ + +G+ +++ T + +
Sbjct: 211 VALFDQMVEIGLTPVVI-TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIP 292
G+ + A+ + EE D + ++ LCK H A F+ + KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
NV TYN +I G+ G+ +++L M+E PD TF++L+ + G++ +A K+
Sbjct: 330 -NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D ++ + +T YN+MI F D+A + + S PD+ T+ +I + +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 413 ARKVADALEML-----------------------------------DEMLGQGIVPSTGT 437
A++V + +++L EM+ G+ P T T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+ C A+ +++ + + + AY +++ + + K +++ +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G D++ Y +I+G C + +A ++ + G P Y+ L L + +++
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 558 RAYKLFLKIKAARSN 572
++ +L I RSN
Sbjct: 625 KSIEL---ISEMRSN 636
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 164/408 (40%), Gaps = 45/408 (11%)
Query: 138 LNGKSAIESALAN--TGVDLSLDVVA-KTLYRG--NLGGEAMVIFFNWAIKQPMIPKDIH 192
L G+ +AL N G L +DVV T+ G +G + +++ I D+
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
Y+ I+ L K + ++ +GI N+ T + + DG R A ++ +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQV 311
E D + N L+ K + A + + + F + TYN++I G+ K +
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
K + + M +PD TF++++ RA R+++ +++ + + V T+ YN +
Sbjct: 418 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM--------- 422
I F V +L+ A ++ ++S+ PD T L+ F + K+ +ALE+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 423 -------------------LDEMLG-------QGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
+DE G+ P T I C A +
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
++ + + G + S Y L+ + G+ + + EM+ +G+S D
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 103/283 (36%), Gaps = 50/283 (17%)
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR---------------C 390
++DA+ FD +V N +I F+ + D AI YR
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 391 LLSNNCD--------------------PDIDTYTKLISAFIKARKVADAL---------- 420
L+ CD PD+ T+ L+ ++++AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 421 -----EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ D+M+ G+ P T + I LC G A + + G I + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++ + + G LN+ +M+E+ D+ +Y II+ LC G +A + E L KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
P+ Y+ + + + + A +L + N + F
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 165/347 (47%), Gaps = 1/347 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y V++ L K+ ID +L + I N+ S V D L + + A+ +F
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQV 311
E G + + + L+ CLC A+ + ++ KI NV T+N +I + K G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ +K+ + M++ PD T+ SL+ G R+++A +F+ ++ KD YN +
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I+ F +DE ++ +R + + TYT LI F +AR +A + +M+ G+
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P+ T + ++ LC G AM++++ +++ + ++ Y +++ + + GK +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
++ + G D+ +Y +I+G C G E A + + G P
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 167/348 (47%), Gaps = 1/348 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G NL T +V +GL + + A + E + + ++ LCK H A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ F ++ K + NV TY+++I+ + ++L M+E P+ TF++L+
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A K++D ++++ + Y+++I+ F LDEA + ++S +C P+
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ TY LI+ F KA+++ + +E+ EM +G+V +T T T+ I A M++K
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G ++ Y LL L + GK + ++E +Q S + Y +I G+C G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++E+ + KG P +IY+ + + E A LF K++
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 179/424 (42%), Gaps = 39/424 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F +K +P I +N +L A+ K K D ++ + ++ GI+ NL T +I+ +
Sbjct: 72 LFGGMVKSRPLPS-IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFN 294
R ++ A+ + G + G+ +L+ LL C + A + + + G P +
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP-D 189
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
T+ T+I G + + +++ MV+ G P+ T+ ++ GL + G I+ A + +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS------ 408
+ +Y+ +I + D+A+ + + + P++ TY+ LIS
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 409 -----------------------------AFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
AF+K K+ +A ++ DEM+ + I P T +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
S I C A +++ C ++ Y L+ + + + ++ EM +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G + Y +I+G +NA +V ++ + G P+ + Y+ L + L + K+E+A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 560 YKLF 563
+F
Sbjct: 490 MVVF 493
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 117/259 (45%)
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
MV+ P F+ LL + + + + + + + + YN +I+ F
Sbjct: 75 GMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
+ A+ ++ +P I T + L++ + ++++DA+ ++D+M+ G P T T T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+ I L A+ + R + GC+ +L Y +++ L + G + N+ +M+ +
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
+++ +Y +I+ LC ++A+ + E +KG P+ + YS L + L + A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 560 YKLFLKIKAARSNENARRF 578
+L + + N N F
Sbjct: 315 SRLLSDMIERKINPNVVTF 333
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I ++ ++N ++ A K+ + K+ ++ I ++ T S + +G R+ +A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+F + + N L+ CK + F + + + N TY T+I G+
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ + + + MV DG P+ T+++LL GL + G++E A+ +F+ L
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN MI G +++ + L PD+ Y +IS F + +A + +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 426 MLGQGIVPSTGT 437
M G +P +GT
Sbjct: 566 MREDGPLPDSGT 577
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
F+ + +L+ + +++DA+ +F +V+ + +N ++S + D
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 385 I----KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
I K R +S+N + TY LI+ F + +++ AL +L +M+ G PS T++S
Sbjct: 105 ISLGEKMQRLGISHN----LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
+ C A+ + + + G + + L+ L K + + + M + G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
++ Y ++NGLC G ++ A ++ + + +IYS + + L + A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 561 KLFLKI--KAARSN 572
LF ++ K R N
Sbjct: 281 NLFTEMENKGVRPN 294
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 182/427 (42%), Gaps = 22/427 (5%)
Query: 160 VAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRT 219
V R N A+ ++ I++ IP +I+S+N++++ + F L L
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRR--IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGF-------------GCD--TESL 264
G ++ T + + GL R+ +A+ +FG E GF G +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
N L+ LC V A + N + GK + +V TY TI+ G K+G +L M E
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
PD + +++ L + G DA +F ++EK YN MI F S G +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A + R ++ +PD+ T+ LISA +K K+ +A ++ DEML + I P T T S I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
C A ++ + + ++ R + + + E+ G +
Sbjct: 410 GFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ Y +I+G C + L A + +E + G CP + + L + K+E A +LF
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 564 LKIKAAR 570
I+ ++
Sbjct: 526 EVIQMSK 532
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 185/435 (42%), Gaps = 46/435 (10%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V F+ ++ + P I ++N ++ L + + ++ + +G+ +++ T + +
Sbjct: 211 VALFDQMVEIGLTPVVI-TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIP 292
G+ + A+ + EE D + ++ LCK H A F+ + KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
NV TYN +I G+ G+ +++L M+E PD TF++L+ + G++ +A K+
Sbjct: 330 -NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D ++ + +T YN+MI F D+A + + S PD+ T+ +I + +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 413 ARKVADALEML-----------------------------------DEMLGQGIVPSTGT 437
A++V + +++L EM+ G+ P T T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+ C A+ +++ + + + AY +++ + + K +++ +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G D++ Y +I+G C + +A ++ + G P Y+ L L + +++
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 558 RAYKLFLKIKAARSN 572
++ +L I RSN
Sbjct: 625 KSIEL---ISEMRSN 636
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 164/408 (40%), Gaps = 45/408 (11%)
Query: 138 LNGKSAIESALAN--TGVDLSLDVVA-KTLYRG--NLGGEAMVIFFNWAIKQPMIPKDIH 192
L G+ +AL N G L +DVV T+ G +G + +++ I D+
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
Y+ I+ L K + ++ +GI N+ T + + DG R A ++ +
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQV 311
E D + N L+ K + A + + + F + TYN++I G+ K +
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
K + + M +PD TF++++ RA R+++ +++ + + V T+ YN +
Sbjct: 418 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM--------- 422
I F V +L+ A ++ ++S+ PD T L+ F + K+ +ALE+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 423 -------------------LDEMLG-------QGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
+DE G+ P T I C A +
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
++ + + G + S Y L+ + G+ + + EM+ +G+S D
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 7/254 (2%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D +YN ++ K D M + + + T + + D RA+RV + +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGM 452
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
Q+ G +T + N L+ C+ ++ AA F + G P + T N ++ G
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP-DTITCNILLYG 511
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + ++ + ++ E + D ++ ++ G+ + ++++A +F +L +
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YN MIS F + +A + + N +PD TY LI +KA ++ ++E++
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 425 EMLGQGIVPSTGTV 438
EM G T+
Sbjct: 632 EMRSNGFSGDAFTI 645
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 103/283 (36%), Gaps = 50/283 (17%)
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR---------------C 390
++DA+ FD +V N +I F+ + D AI YR
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 391 LLSNNCD--------------------PDIDTYTKLISAFIKARKVADAL---------- 420
L+ CD PD+ T+ L+ ++++AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 421 -----EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ D+M+ G+ P T + I LC G A + + G I + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++ + + G LN+ +M+E+ D+ +Y II+ LC G +A + E L KG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
P+ Y+ + + + + A +L + N + F
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 170/381 (44%), Gaps = 41/381 (10%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+ ++N +LR L KK + K+L + G+ NL T ++ GL + + A+++ G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKI 308
E G D + N L+ LCK S + A Y + +G P + TYNT+IAG+ K
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP-DSYTYNTLIAGYCKG 334
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN------------- 355
G V ++I+ V +GF PD T+ SL+ GL G AL +F+
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 356 ----------------------LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
+ EK + E +N +++ +G + +A + ++S
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
PDI T+ LI + K+ +ALE+LD ML G+ P T S + LC
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
M YK + GC +L + +LL L R+ K L + EEM+ + D + +I+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 514 GLCNIGQLENAVLV---MEES 531
G C G L+ A + MEE+
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEA 595
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 177/388 (45%), Gaps = 7/388 (1%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
++ + + + P D ++YN ++ K + +++ D G + T + DG
Sbjct: 307 VYLGKMVNEGLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPF 293
L +A+ +F G + N L++ L + + A N + KG IP
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP- 424
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
V T+N ++ G K+G V +++ M+ G+ PD TF+ L+ G ++E+AL+I
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D +++ + YN++++ ++ ++ Y+ ++ C P++ T+ L+ + +
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA- 472
RK+ +AL +L+EM + + P T + I+ C G A ++++ +A K+S S
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA-YKVSSSTP 603
Query: 473 -YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEES 531
Y +++ + M +++EM + D Y +++G C G + + E
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 532 LHKGFCPSRLIYSKLYNKLLASNKVERA 559
+ GF PS ++ N L ++V A
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEA 691
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 173/379 (45%), Gaps = 11/379 (2%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+ SYN I+ L + D K+ +R GIT ++ + +I + R + A+++
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 251 NTEEFGFGCDTESLNVLLQCLC------KRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
N G C+ +NV+ C + + + + ++T+N ++
Sbjct: 171 NMSSQG--CE---MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
K G V + +K+L+ +++ G P+ T++ +QGL + G ++ A+++ L+E+ +
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YN +I EA Y +++ +PD TY LI+ + K V A ++
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+ + G VP T S I+ LC G + A+ ++ A G K ++ Y L+ LS G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+ EM E G +++ + ++NGLC +G + +A +++ + KG+ P ++
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 545 KLYNKLLASNKVERAYKLF 563
L + K+E A ++
Sbjct: 466 ILIHGYSTQLKMENALEIL 484
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 183/445 (41%), Gaps = 44/445 (9%)
Query: 177 FFNWAIKQPM------IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLS 230
+F+ A K M I D++S+ + +++ K L++L ++ ++G +N+
Sbjct: 126 YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYC 185
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--K 288
V G + ++FG G + N LL+ LCK+ V+ + V +
Sbjct: 186 TVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 289 GKIPFNVATYNTIIAGWSKIGQ-----------------------------VCQMKKILE 319
G +P N+ TYN I G + G+ +C+ K E
Sbjct: 246 GVLP-NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 320 A------MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
A MV +G PD T+++L+ G + G ++ A +I + V +V + Y ++I
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
G+ + A+ + L P++ Y LI + +A ++ +EM +G++P
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP 424
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
T + LC G A + K G + + +L+ S K L I
Sbjct: 425 EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
+ M ++G D+ Y ++NGLC + E+ + + + KG P+ ++ L L
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 554 NKVERAYKLFLKIKAARSNENARRF 578
K++ A L ++K N +A F
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 159 VVAKTLYRGNLGGEAMVI----FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML 214
++ TL +G L + M++ N ++ +IP ++ ++N+++ L K + ++
Sbjct: 392 ILYNTLIKG-LSNQGMILEAAQLANEMSEKGLIP-EVQTFNILVNGLCKMGCVSDADGLV 449
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
+ + ++G ++ T +I+ G ++ A++I + G D + N LL LCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 275 SHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
S + + KG P N+ T+N ++ + ++ + +LE M PD T
Sbjct: 510 SKFEDVMETYKTMVEKGCAP-NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE-TSVYNAMISNFISVGDLDEAIKYYRCL 391
F +L+ G + G ++ A +F + E V T YN +I F ++ A K ++ +
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ PD TY ++ F K V + L EM+ G +PS T+ I LC
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 452 HAAMMIYKRARKAG 465
+ A I R + G
Sbjct: 689 YEAAGIIHRMVQKG 702
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK--DYVLETSVYNAMISNFISVGD 380
E GF ST+ S+++ LG G+ E ++ ++ E +++LE VY + N+ G
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE-GVYVGAMKNYGRKGK 91
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+ EA+ + + +C+P + +Y ++S + + A ++ M +GI P + T
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
++ C PHAA+ + GC++++ AY ++ ++ +M SG
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
S + + ++ LC G ++ ++++ + +G P+ Y+ L +++ A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 561 KL 562
++
Sbjct: 272 RM 273
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 130/313 (41%), Gaps = 39/313 (12%)
Query: 272 CKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMKKILEAMVED-GFTP 328
C++ ++A FN+++ ++ F ++TY ++I G+ M+++L M E+ G
Sbjct: 16 CQKDPMKAL-EMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHM 74
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
+ ++ GR G++++A+ +F+ + D YNA++S + G D+A K Y
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG----IVPSTGTVTSFIEP 444
+ PD+ ++T + +F K + AL +L+ M QG +V V F E
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 445 -------------------------------LCSFGPPHAAMMIYKRARKAGCKISLSAY 473
LC G + + K G +L Y
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L + L + G+ + + + E G D+ Y +I GLC + + A + + + ++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 534 KGFCPSRLIYSKL 546
+G P Y+ L
Sbjct: 315 EGLEPDSYTYNTL 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ ++N++L +L + + +D L +L +++ + + + T + DG + + A +F
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 250 GNTEE-FGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSK 307
EE + T + N+++ ++ +V A F + + + + TY ++ G+ K
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
G V K L M+E+GF P +T ++ L R+ +A I +V+K V E
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 198/484 (40%), Gaps = 76/484 (15%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
S +VV + L GN A +F++ ++ IP + ++ V+++A ID L +LR
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGC--DTESLN-------- 265
D+ G N + L + RV +A+Q+ E F GC D E+ N
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL--EEMFLMGCVPDAETFNDVILGLCK 299
Query: 266 ---------------------------VLLQCLCKRSHVRAANSYFNAVK---------- 288
L+ LCK V AA F +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 289 ------------------------GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
G +P +V TYN++I G+ K G V ++L M
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVP-DVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G P+ ++ L+ G + G+I++A + + + T +N +IS F + EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
++ +R + C PD+ T+ LIS + ++ AL +L +M+ +G+V +T T + I
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
G A + G + Y L+ L R G+ +++E+M G++
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 505 MEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFL 564
+INGLC G +E AV +E + +G P + ++ L N L + ++E +F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 565 KIKA 568
K++A
Sbjct: 659 KLQA 662
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 34/372 (9%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D+ +YN ++ K+ + L++L D+R +G N+ + +I+ DG + ++ +A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
+ G +T N L+ CK +IP V
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEH--------------RIPEAV----------- 479
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+I M G PD TF+SL+ GL I+ AL + +++ + V T
Sbjct: 480 ---------EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN +I+ F+ G++ EA K ++ D TY LI +A +V A + ++M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
L G PS + I LC G A+ K G + + L+ L R G+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
L ++ ++Q G D + +++ LC G + +A L+++E + GF P+ +S L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 547 YNKLLASNKVER 558
++ ++R
Sbjct: 711 LQSIIPQETLDR 722
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 169/428 (39%), Gaps = 48/428 (11%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F+W Q Y V++ LG + ++L ++ EGI E+L
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFK-ESL------F 149
Query: 237 VRAQRVYKAIQIFGNTEEFG------FGCDT--ESLNVLLQCLCK-RSHVRAANSYFNAV 287
+ R Y G T + C+ +S NV+L+ L H AAN +++ +
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
KIP + T+ ++ + + ++ +L M + G P+ + +L+ L + R+
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY---------------YRCLL 392
+AL++ + + V + +N +I ++EA K Y L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 393 SNNC----------------DPDIDTYTKLISAFIKARKVADALEMLDEMLGQ-GIVPST 435
+ C P+I + LI F+ ++ DA +L +M+ GIVP
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T S I G A+ + R GCK ++ +Y +L+ + GK N+ E
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M G + + +I+ C ++ AV + E KG P ++ L + L ++
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 556 VERAYKLF 563
++ A L
Sbjct: 510 IKHALWLL 517
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
++G+ + L+ LG G + ++ + ++ V + S++ +++ ++ G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 383 EAIKYYRCLLS-NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
+ + + + +C+P +Y ++ + A + +ML + I P+ T
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
++ C+ +A+ + + K GC + Y+ L+ LS+ + L + EEM G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
D E + +I GLC ++ A ++ L +GF P + Y L N L +V+ A
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 562 LFLKI 566
LF +I
Sbjct: 344 LFYRI 348
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 179/380 (47%), Gaps = 3/380 (0%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
+D+ S N LR + + ++ K L ++ G ++ + + G R + KA +I
Sbjct: 101 EDVESNNH-LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
E G D + NV++ CK + A S + + + +V TYNTI+
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTILRSLCDS 217
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G++ Q ++L+ M++ PD T+ L++ R + A+K+ D + ++ + Y
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N +++ G LDEAIK+ + S+ C P++ T+ ++ + + DA ++L +ML
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G PS T I LC G A+ I ++ + GC+ + +Y LL + K
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ E M G D+ Y ++ LC G++E+AV ++ + KG P + Y+ + +
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 549 KLLASNKVERAYKLFLKIKA 568
L + K +A KL +++A
Sbjct: 458 GLAKAGKTGKAIKLLDEMRA 477
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 13/384 (3%)
Query: 187 IPKDIHSYNVILRAL---GK-KKFIDFMLKML-RDLRTEGITVNLETLSIVADGLVRAQR 241
+ D+ +YN ILR+L GK K+ ++ + +ML RD + IT +I+ + R
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT-----YTILIEATCRDSG 254
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYN 299
V A+++ + G D + NVL+ +CK + A + N + G P NV T+N
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP-NVITHN 313
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
I+ G+ +K+L M+ GF+P TF+ L+ L R G + A+ I + + +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ YN ++ F +D AI+Y ++S C PDI TY +++A K KV DA
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+E+L+++ +G P T + I+ L G A+ + R K Y L+
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
LSR GK + + E + G + + I+ GLC Q + A+ + +++G P+
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 540 RLIYSKLYNKLLASNKVERAYKLF 563
Y+ L L + A +L
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELL 577
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 164/349 (46%), Gaps = 3/349 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +Y +++ A + + +K+L ++R G T ++ T +++ +G+ + R+ +AI+
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ G + + N++L+ +C A + KG P +V T+N +I +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP-SVVTFNILINFLCR 356
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + + ILE M + G P+ +++ LL G + +++ A++ + +V + +
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN M++ G +++A++ L S C P + TY +I KA K A+++LDEM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
+ + P T T +S + L G A+ + + G + + + +++ L + +
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
++ M G + Y +I GL G + A+ ++ E +KG
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 170/402 (42%), Gaps = 41/402 (10%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
K+L L G ++ T +++ G +A + A+ + + D + N +L+ L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNTILRSL 214
Query: 272 CKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
C ++ A + + + + +V TY +I + V K+L+ M + G TPD
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 331 STFDSLLQGLGRAGRIEDALKIFD-----------------------------------N 355
T++ L+ G+ + GR+++A+K + +
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
++ K + +N +I+ G L AI + + C P+ +Y L+ F K +K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ A+E L+ M+ +G P T + + LC G A+ I + GC L Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++ L++ GK G + + +EM+ D Y ++ GL G+++ A+ E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 536 FCPSRLIYSKLYNKLLASNKVERA--YKLFLKIKAARSNENA 575
P+ + ++ + L S + +RA + +F+ + + NE +
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 185/423 (43%), Gaps = 57/423 (13%)
Query: 190 DIHSYNVILRALGKKK-FIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
D+ +YNVILR + +++ F + ++ + NL T I+ DGL + R A ++
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWS 306
F + G + + +L+ LC+R A F ++ G P +VA +N ++ G+
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA-HNALLDGFC 279
Query: 307 KIGQVCQMKKILEAMVEDGFT-----------------------------------PDCS 331
K+G++ + ++L +DGF PD
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
+ L+QGL +AG+IEDALK+ ++ K +T YNA+I G L+E +
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
PD T+T LI + + V +A E+ E+ G PS T + I+ LC G
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE- 458
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG--------KCGMLLNIWEEMQ---ESG 500
K AR K+ + L +RLS G + G +L + ++ ++G
Sbjct: 459 ------LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTG 512
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
S D+ Y +ING C G ++ A+ ++ KG P + Y+ L N L + E A+
Sbjct: 513 SSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAF 572
Query: 561 KLF 563
KLF
Sbjct: 573 KLF 575
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 183/453 (40%), Gaps = 37/453 (8%)
Query: 127 EEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPM 186
E + G + L K IE AL LS +++ + + + + FF WA ++
Sbjct: 30 EFNISGEVISILAKKKPIEPALEPLVPFLSKNIITSVI-KDEVNRQLGFRFFIWASRRER 88
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ + S+ +++ L + D + L +L++ G++V+ ++ + KA+
Sbjct: 89 L-RSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV 147
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
+ FG +EF D + NV+L R +R + A A YN
Sbjct: 148 ESFGRMKEFDCRPDVFTYNVIL-----RVMMREEVFFMLAF--------AVYN------- 187
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
M++ +P+ TF L+ GL + GR DA K+FD++ +
Sbjct: 188 -------------EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
Y +IS G D+A K + + ++ PD + L+ F K ++ +A E+L
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
G V +S I+ L A +Y K K + Y +L+ LS+ GK
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA-VLVMEESLHKGFCPSRLIYSK 545
L + M G S D Y +I LC G LE L +E S + F P ++
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-PDACTHTI 413
Query: 546 LYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
L + + V A ++F +I+ + + + F
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 185/455 (40%), Gaps = 72/455 (15%)
Query: 164 LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L+R +A ++ N K I DI Y ++++ L K I+ LK+L + ++GI+
Sbjct: 313 LFRARRYTQAFELYANMLKKN--IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 224 -----VNLETLSIVADGLVRAQRVYKAIQI-FGNTEEFGFGCDTESLNVLLQCLCKRSHV 277
N ++ GL+ R ++Q+ TE F C + +L+ +C+ V
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGR---SLQLEMSETESFPDAC---THTILICSMCRNGLV 424
Query: 278 RAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAM--------------- 321
R A F + K +VAT+N +I G K G++ + + +L M
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 322 ------------------------VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
+ G +PD +++ L+ G RAG I+ ALK+ + L
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
K ++ YN +I+ VG +EA K + P + Y L++ + RKV
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVL 602
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM--MIYKRARKAGCKISLSAYKL 475
A + + L + T IE G A+ +I RK +++L Y +
Sbjct: 603 VAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERALRRLIELDTRKD--ELTLGPYTI 659
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
L+ L + G+ L ++ ++E +I+GLC QL+ A+ V +L
Sbjct: 660 WLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNN 719
Query: 536 FCPSRLIYSKLYNKLLAS-----------NKVERA 559
F + + L + LL S N++ERA
Sbjct: 720 FKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERA 754
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 169/371 (45%), Gaps = 13/371 (3%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT---VNLETLSIVA 233
FFNW ++ ++N ++ LGK + +F + R G T N T IV
Sbjct: 67 FFNWVERESGFRHTTETFNRVIDILGK--YFEFEISWALINRMIGNTESVPNHVTFRIVF 124
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF---NAV-KG 289
V A V +AI + ++F +T N L+ LC+ HV A N + G
Sbjct: 125 KRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
N +N I+ GWSK+G + K+ + M +G T D ++ + + ++G+ A
Sbjct: 184 FSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKA 243
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+K++ + + L+ YN +I + ++ I+ +R + C+P++ T+ +I
Sbjct: 244 VKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
+ ++ DA MLDEM +G P + T L P + ++ R ++G +
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPK 360
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ Y +L+ + R+G +L +W+ M+ESG + D Y +I+ L G L+ A E
Sbjct: 361 MDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 420
Query: 530 ESLHKGFCPSR 540
E + +G P R
Sbjct: 421 EMIERGLSPRR 431
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 129/291 (44%), Gaps = 7/291 (2%)
Query: 272 CKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT-P 328
C + + A +FN V+ + F T+N +I K + ++ M+ + + P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA--IK 386
+ TF + + A +++A+ +D L + + ETS YN ++ + EA +
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELC 174
Query: 387 YYRCLLSNNCD-PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+ + ++ N + + ++ + K E +M +G+ + + +++ +
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
C G P A+ +YK + K+ + AY ++ + + ++ EM+E G ++
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKV 556
+ II LC G++ +A +++E +G P + Y L+++L +++
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI 345
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 135 LQKLNGKSAIESALANTGV-DLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHS 193
+ +L ++++S +N G D D++ +T + EA F ++ I +
Sbjct: 145 VSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF--TLLRSKGFTVSIDA 202
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
N ++ +L + +++ + +++ G+ +N+ TL+I+ + L + ++ K +
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVC 312
E G D + N L+ + + A NA+ GK V TYNT+I G K G+
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ K++ M+ G +PD +T+ SLL + G + + K+F ++ +D V + +++M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 373 SNFISVGDLDEAIKYYRC-----------------------------------LLSNNCD 397
S F G+LD+A+ Y+ +L C
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
D+ TY ++ K + + +A ++ +EM + + P + T+T I+ C G AM +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
+++ ++ ++ + Y LL + G IW +M Y ++N LC+
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 518 IGQLENAVLVMEESLHKGFCPSRLI 542
G L A V +E + K P+ +I
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMI 587
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 171/376 (45%), Gaps = 3/376 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D +Y +L KK + K+ D+R+ + +L S + R+ + KA+ F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKI 308
+ +E G D +L+Q C++ + A + N ++ +V TYNTI+ G K
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
+ + K+ M E PD T L+ G + G +++A+++F + EK L+ Y
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N ++ F VGD+D A + + ++S P +Y+ L++A +A+A + DEM+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ I P+ S I+ C G ++ G +Y L+ R
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 489 LLNIWEEMQE--SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ ++M+E G D+ Y I++G C Q++ A +V+ + + +G P R Y+ +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 547 YNKLLASNKVERAYKL 562
N ++ + + A+++
Sbjct: 699 INGFVSQDNLTEAFRI 714
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 165/375 (44%), Gaps = 41/375 (10%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
GNL + +++FN + +IP ++ Y ++++ +K I + + ++ +G +++
Sbjct: 389 GNL--DKALMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
T + + GL + + + +A ++F E D+ +L +L+ CK +++ A F
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 287 VKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR 345
+K K I +V TYNT++ G+ K+G + K+I MV P ++ L+ L G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
+ +A +++D ++ K+ + N+MI + G+ + + ++S PD +Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 406 LISAFIKARKVADALEMLDEMLGQ--GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
LI F++ ++ A ++ +M + G+VP T S + C A ++ ++
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK--- 682
Query: 464 AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
M E G + D Y +ING + L
Sbjct: 683 --------------------------------MIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 524 AVLVMEESLHKGFCP 538
A + +E L +GF P
Sbjct: 711 AFRIHDEMLQRGFSP 725
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N + ++ +I + + ++ + + + GFT ++L+ L R G +E A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + N M++ G +++ + + PDI TY LISA+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ +A E+++ M G+G P T + I LC G A ++ ++G + Y
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+ LLM + G ++ +M+ D+ + +++ G L+ A++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 534 KGFCPSRLIYSKL 546
G P +IY+ L
Sbjct: 404 AGLIPDNVIYTIL 416
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
+ +++ L R+GR+ DA ++ + V + N++ S F
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF---------------- 158
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+NC + + LI +++ARK+ +A E + +G S + I L G
Sbjct: 159 --SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A +Y+ ++G I++ +++ L + GK + ++QE G D+ Y +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
I+ + G +E A +M KGF P Y+ + N L K ERA ++F
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
GNL AM +F +K+ I D+ +YN +L GK ID ++ D+ ++ I
Sbjct: 494 GNLQ-NAMELF--QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
+ SI+ + L + +A +++ N +++ C+ + S+
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 287 V--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED--GFTPDCSTFDSLLQGLGR 342
+ +G +P + +YNT+I G+ + + + +++ M E+ G PD T++S+L G R
Sbjct: 611 MISEGFVP-DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
++++A + ++E+ + S Y MI+ F+S +L EA + + +L PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 181/421 (42%), Gaps = 6/421 (1%)
Query: 148 LANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFI 207
L+ V ++ +V + L R + G FF WA Q H+YN ++ LGK +
Sbjct: 123 LSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNF 182
Query: 208 DFMLKMLRDLRT--EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE-FGFGCDTESL 264
D M +++ ++ E V L+T+S V L ++ + KA+ F E+ +G DT ++
Sbjct: 183 DLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAM 242
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
N L+ L K + + A+ F + I + T+N +I G+ K + + +++ M
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
FTPD T+ S ++ + G ++ + + E Y ++ + + EA
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
+ Y + + C PD Y+ LI K + DA E+ ++M QG+ + I
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 445 LCSFGPPHAAMMIYKRARK---AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
A+ + KR C ++ Y LL K +L + M ++
Sbjct: 423 ALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDV 482
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
S D+ Y +I GLC G++E A L EE++ KG P L ++L N E K
Sbjct: 483 SIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLK 542
Query: 562 L 562
+
Sbjct: 543 I 543
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV--YNAMISNFISVGDLDEAIKYYR 389
T +++ L ++G+ A+ F + EK Y ++T N+++ + ++ A + +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEM-EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFL 263
Query: 390 CLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
L + PD T+ LI F KARK DA M+D M P T TSF+E C G
Sbjct: 264 KLF-DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 450 PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
+ + R+ GC ++ Y +++ L + + L ++E+M+E G D + Y
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+I+ L G+ ++A + E+ ++G L+Y+ + + L ++ E A +L +++
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 184/408 (45%), Gaps = 18/408 (4%)
Query: 178 FNWAIKQPMIPKDIHSY------NVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
F+W +KQ KD S +I+ LGK+ + M L+ +G ++++ + +
Sbjct: 158 FDWFMKQ----KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR-SHVRAANSYFNAVKGK 290
+ + R +A+ +F EE G + NV+L K + S +K
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 291 -IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
I + TYNT+I + + ++ E M GF+ D T+++LL G++ R ++A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+K+ + +V + YN++IS + G LDEA++ + PD+ TYT L+S
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
F +A KV A+ + +EM G P+ T +FI+ + G M I+ G
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 470 LSAYKLLLMRLSRFGKCGM---LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ + L L+ FG+ GM + +++EM+ +G+ + E + +I+ G E A+
Sbjct: 454 IVTWNTL---LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
V L G P Y+ + L E++ K+ +++ R N
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 3/252 (1%)
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D S ++ LG+ GR+ A +F+ L E + L+ Y ++IS F + G EA+ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADAL-EMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+ + + C P + TY +++ F K + + ++++M GI P T + I C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCK 290
Query: 448 FGPPHA-AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDME 506
G H A +++ + AG Y LL + + + + EM +G+S +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 507 VYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
Y +I+ G L+ A+ + + KG P Y+ L + + KVE A +F ++
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 567 KAARSNENARRF 578
+ A N F
Sbjct: 411 RNAGCKPNICTF 422
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 15/235 (6%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRT---EGITVNLETLSIVA---DGLVRAQRVYKAI 246
+Y +L A K I M + ++ + E V L+TL +V D L A+R + +
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAG 304
+ E GF D +LN ++ +R V AN + +K G P ++ATYN+++
Sbjct: 621 K------ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP-SMATYNSLMYM 673
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
S+ + ++IL ++ G PD ++++++ R R+ DA +IF + V +
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
YN I ++ + +EAI R ++ + C P+ +TY ++ + K + +A
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 1/282 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
++N ++ A + + + + R + G+T +L T + V L R ++ ++
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQV 311
E+ + + LL + +S V G I T++ SK +
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ ++ + E GF+PD +T +S++ GR + A + D + E+ + + YN++
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+ D ++ + R +L+ PDI +Y +I A+ + ++ DA + EM GI
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
VP T +FI + A+ + + K GC+ + + Y
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 11/266 (4%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ D+ +YN +L AL + + K+L ++ N T L+ A K I
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC----SLLHAYANGKEI 575
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCL---CKRSHV-RAANSYFNAVK--GKIPFNVATYNT 300
+ + E + E VLL+ L C + + A F+ +K G P ++ T N+
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP-DITTLNS 634
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+++ + + V + +L+ M E GFTP +T++SL+ R+ + +I ++ K
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
+ YN +I + + +A + + + ++ PD+ TY I ++ +A+
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLC 446
++ M+ G P+ T S ++ C
Sbjct: 755 GVVRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K+ DI + N ++ G+++ + +L ++ G T ++ T + + R+
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYN 299
K+ +I G D S N ++ C+ + +R A+ F+ ++ G +P +V TYN
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP-DVITYN 738
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T I ++ + ++ M++ G P+ +T++S++ G + R ++A ++L
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Query: 360 D 360
D
Sbjct: 799 D 799
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 181/420 (43%), Gaps = 39/420 (9%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ D+++ N+++ + L + G ++ T + + +G R+ +A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGW 305
+ E G D ++ LCK HV A S F+ ++ I +V Y +++ G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
G+ +L M + PD TF++L+ + G+ DA ++++ ++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y ++I+ F G +DEA + + + + C PD+ YT LI+ F K +KV DA+++ E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +G+ +T T T+ I+ G P+ A ++ G ++ Y +LL L GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 486 CGMLLNIWEEMQE---SGYSSDMEVYEYIINGLC-------------------------- 516
L I+E+MQ+ G + ++ Y +++GLC
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 517 ---------NIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G+++NAV + KG P+ + Y+ + + L A+ LF K+K
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 171/387 (44%), Gaps = 7/387 (1%)
Query: 198 LRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGF 257
L +L + +D M+ I + L+++A + ++ I + + + G
Sbjct: 48 LHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIA----KMKKFDVVINLCDHLQIMGV 103
Query: 258 GCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMK 315
D + N+L+ C C+ S A+S+ + K+ F ++ T+ ++I G+ ++ +
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMM-KLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
++ MVE G PD + +++ L + G + AL +FD + + +Y ++++
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
+ G +A R + PD+ T+ LI AF+K K DA E+ +EM+ I P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T TS I C G A ++ GC + AY L+ + K + I+ E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M + G + + Y +I G +G+ A V + +G P+ Y+ L + L + K
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 556 VERAYKLFLKIKAARSNENARRFWRAN 582
V++A +F ++ + A W N
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 159/353 (45%), Gaps = 6/353 (1%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
GN EAM + N ++ + P D+ Y I+ +L K +++ L + + GI ++
Sbjct: 155 GNRMEEAMSMV-NQMVEMGIKP-DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN- 285
+ + +GL + R A + + D + N L+ K A +N
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 286 AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR 345
++ I N+ TY ++I G+ G V + +++ M G PD + SL+ G + +
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
++DA+KIF + +K T Y +I F VG + A + + ++S P+I TY
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 406 LISAFIKARKVADALEMLDEMLGQ---GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
L+ KV AL + ++M + G+ P+ T + LC G A+M+++ R
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
K I + Y +++ + + GK +N++ + G ++ Y +I+GL
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 187 IPKDIHSYNVILRALGKK-KFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
I D+ ++N ++ A K+ KF+D ++ ++ I N+ T + + +G V +A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAG 304
Q+F E G D + L+ CK V A F + K + N TY T+I G
Sbjct: 302 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY--- 361
+ ++G+ +++ MV G P+ T++ LL L G+++ AL IF+++ +++
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
YN ++ G L++A+ + + D I TYT +I KA KV +A+
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
+ + +G+ P+ T T+ I L G H A +++++ ++ G
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 5/259 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
+N I+ + P +I +Y ++ + +D +M + T+G ++ + + +G
Sbjct: 269 LYNEMIRMSIAP-NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNV 295
+ ++V A++IF + G +T + L+Q + A F + V +P N+
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVE---DGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
TYN ++ G+V + I E M + DG P+ T++ LL GL G++E AL +
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
F+++ +++ + Y +I G + A+ + L S P++ TYT +IS +
Sbjct: 448 FEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Query: 413 ARKVADALEMLDEMLGQGI 431
+A + +M G+
Sbjct: 508 EGLKHEAHVLFRKMKEDGV 526
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%)
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y ++ N + +EA+ + ++ + P I +TKL++ K +K + + D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ T + C P+ A + K G + + + L+ +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
+++ +M E G D+ +Y II+ LC G + A+ + ++ + G P ++Y+ L
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 548 NKLLASNKVERAYKLF 563
N L S + A L
Sbjct: 220 NGLCNSGRWRDADSLL 235
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 186/436 (42%), Gaps = 39/436 (8%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
+ F I+ +P + ++ A+ + K + +L + L GI N+ TL+I+ +
Sbjct: 63 IALFQEMIRSRPLPS-LVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA-------------- 280
R + A + G + G+ DT + N L++ L V A
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181
Query: 281 -----NSYFNAV-----------------KGKIPFNVATYNTIIAGWSKIGQVCQMKKIL 318
NS N + + + +V TY+TII + G + +
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 319 EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
+ M G T++SL++GL +AG+ D + ++V ++ V +N ++ F+
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301
Query: 379 GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
G L EA + Y+ +++ P+I TY L+ + ++++A MLD M+ P T
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
TS I+ C M +++ K G + Y +L+ + GK + +++EM
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
G D+ Y +++GLC+ G+LE A+ + E+ ++Y+ + + KVE
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481
Query: 559 AYKLF--LKIKAARSN 572
A+ LF L K + N
Sbjct: 482 AWNLFCSLPCKGVKPN 497
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 181/396 (45%), Gaps = 2/396 (0%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V+ + ++ P D+ +YN I+ + + L +LR + + ++ T S + D
Sbjct: 168 VVLVDRMVENGCQP-DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 226
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVR-AANSYFNAVKGKIPF 293
L R + AI +F E G + N L++ LCK A + V +I
Sbjct: 227 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 286
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
NV T+N ++ + K G++ + ++ + M+ G +P+ T+++L+ G R+ +A +
Sbjct: 287 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D +V + + ++I + V +D+ +K +R + + TY+ L+ F ++
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ A E+ EM+ G++P T ++ LC G A+ I++ +K+ + + Y
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 466
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
++ + + GK N++ + G ++ Y +I+GLC G L A +++ +
Sbjct: 467 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
G P+ Y+ L L + + KL ++K+
Sbjct: 527 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 562
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 163/351 (46%), Gaps = 1/351 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ D+ +Y+ I+ +L + ID + + +++ T+GI ++ T + + GL +A +
Sbjct: 214 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 273
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS-YFNAVKGKIPFNVATYNTIIAGW 305
+ + + + NVLL K ++ AN Y + I N+ TYNT++ G+
Sbjct: 274 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGY 333
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
++ + +L+ MV + +PD TF SL++G R++D +K+F N+ ++ V
Sbjct: 334 CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 393
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y+ ++ F G + A + ++ ++S+ PD+ TY L+ K+ ALE+ ++
Sbjct: 394 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 453
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ + T+ IE +C G A ++ G K ++ Y +++ L + G
Sbjct: 454 LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 513
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ +M+E G + + Y +I G L + ++EE GF
Sbjct: 514 LSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +I +YN ++ + + ML + + ++ T + + G +RV +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
++F N + G + + ++L+Q C+ ++ A F + G +P +V TY ++ G
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDG 437
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
G++ + +I E + + + ++++G+ + G++EDA +F +L K
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y MIS G L EA R + + P+ TY LI A ++ + + ++++
Sbjct: 498 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 557
Query: 425 EMLGQGIVPSTGTVTSFIEPLCS 447
EM G ++ I+ L S
Sbjct: 558 EMKSCGFSADASSIKMVIDMLLS 580
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 1/227 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI ++ +++ K +D +K+ R++ G+ N T SI+ G ++ ++ A ++F
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKI 308
G D + +LL LC + A F + K K+ + Y TII G K
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G+V + ++ G P+ T+ ++ GL + G + +A + + E Y
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
N +I + GDL + K + S D + +I + A K
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 93/209 (44%)
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+DA+ +F ++ + ++ S + + + + L N +I T +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
I+ F + K A +L +++ G P T T + I+ L G A+++ R + GC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ + Y ++ + R G + L++ +M+E +D+ Y II+ LC G ++ A+
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNK 555
+ +E KG S + Y+ L L + K
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGK 268
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 7/211 (3%)
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
D+AI ++ ++ + P + +++ SA + ++ L+ ++ GI + T+
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I C A + + K G + + + L+ L GK + + + M E+G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
D+ Y I+NG+C G A+ ++ + + YS + + L ++ A
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 562 LF--LKIKAARS-----NENARRFWRANGWH 585
LF ++ K +S N R +A W+
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 216/484 (44%), Gaps = 61/484 (12%)
Query: 134 FLQKLNGKSAIESALANTGVDLSLDVVAKT-----LYRGNLGGEAMVIFFNWAIKQPMIP 188
F+++ N + A+ G + + V+A T +GN G+A+ +F N ++ + P
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF-NRMEEEGLAP 378
Query: 189 KDIHSYNVILRALGK----KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYK 244
+ ++V++ K +K I+F ++M + +R +V + T+ G ++A+
Sbjct: 379 DKVM-FSVMVEWFCKNMEMEKAIEFYMRM-KSVRIAPSSVLVHTM---IQGCLKAESPEA 433
Query: 245 AIQIFGNTEE----FGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYN 299
A++IF ++ E GF C N + CK+ V AA S+ ++ K I NV YN
Sbjct: 434 ALEIFNDSFESWIAHGFMC-----NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF-------------------------- 333
++ ++ + + I M+E G P+ T+
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 334 ---------DSLLQGLGRAGRIEDALKIFDNLV-EKDYVLETSVYNAMISNFISVGDLDE 383
++++ GL + G+ A ++ NL+ EK Y + + YN++I F+ VGD D
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A++ YR + N P++ T+T LI+ F K+ ++ ALEM EM + + I+
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
C A ++ + G ++S Y L+ GK ++++++M G S
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
D+ Y +I+GL G + A + E L G P +++ L N L + +A K+
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 564 LKIK 567
++K
Sbjct: 789 EEMK 792
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 7/379 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
++Q I ++ YN ++ A + K +D + ++ +G+ N T SI+ DG + +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGK-IPFNVATYN 299
A + F + N ++ LCK A N +K K + +YN
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
+II G+ K+G + M E+G +P+ TF SL+ G ++ R++ AL++ +
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ L+ Y A+I F D+ A + L P++ Y LIS F K+ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+++ +M+ GI T T+ I+ L G + A +Y G + +L+
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
LS+ G+ + EEM++ + ++ +Y +I G G L A + +E L KG
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 540 RLIYSKLYNKLLASNKVER 558
+++ LL S +VE+
Sbjct: 835 DTVFN-----LLVSGRVEK 848
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 197/460 (42%), Gaps = 14/460 (3%)
Query: 111 NKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLD-VVAKTLYRGNL 169
N++EE + D + + F + + + AIE + V ++ V+ T+ +G L
Sbjct: 369 NRMEEEGLAPDKVMF--SVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 170 GGE---AMVIFFNWAIKQPMIPKDIHSY--NVILRALGKKKFIDFMLKMLRDLRTEGITV 224
E A + FN + + + H + N I K+ +D L+ + +GI
Sbjct: 427 KAESPEAALEIFNDSFESWIA----HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
N+ + + R + + A IF E G + + ++L+ K + A
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 285 NAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMV-EDGFTPDCSTFDSLLQGLGR 342
N + N YNTII G K+GQ + K++L+ ++ E ++ C++++S++ G +
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
G + A++ + + E + ++I+ F +D A++ + S D+
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
Y LI F K + A + E+ G++P+ S I + G AA+ +YK+
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
G L Y ++ L + G + +++ E+ + G D ++ ++NGL GQ
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 523 NAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
A ++EE K P+ L+YS + + A++L
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 160/381 (41%), Gaps = 7/381 (1%)
Query: 185 PMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYK 244
P +P N +L +L + ID ++ + G+ + T ++ +R ++ +
Sbjct: 202 PFVP----YVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEE 257
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYNTII 302
A++IF G D ++ +Q CK + A ++GK +P + TY ++I
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
+ K G + + ++++ MV G SL+ G + + AL +F+ + E+
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+ +++ M+ F ++++AI++Y + S P +I +KA ALE+
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
++ I F+ C G AA K + G + ++ Y +++ R
Sbjct: 438 FNDSFESWIAHGFMCNKIFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
+ +I+ EM E G + Y +I+G +NA V+ + F + +I
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 543 YSKLYNKLLASNKVERAYKLF 563
Y+ + N L + +A ++
Sbjct: 557 YNTIINGLCKVGQTSKAKEML 577
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/427 (19%), Positives = 179/427 (41%), Gaps = 29/427 (6%)
Query: 143 AIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALG 202
A+++A + ++LD++ + RG LG +P +Y ++ A
Sbjct: 280 AVQAACKTPDLVMALDLLREM--RGKLG----------------VPASQETYTSVIVAFV 321
Query: 203 KKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTE 262
K+ ++ ++++ ++ GI +++ + + +G + + KA+ +F EE G D
Sbjct: 322 KEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV 381
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKI---- 317
+V+++ CK + A ++ +K +I + +T+I G K +I
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS 441
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
E+ + GF C + + + G+++ A + +K YN M+
Sbjct: 442 FESWIAHGFM--C---NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
+ ++D A + +L +P+ TY+ LI F K + +A +++++M +
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 438 VTSFIEPLCSFGPPHAAM-MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
+ I LC G A M+ ++ +S ++Y ++ + G + + EM
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKV 556
E+G S ++ + +ING C +++ A+ + E Y L + N +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 557 ERAYKLF 563
+ AY LF
Sbjct: 677 KTAYTLF 683
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ ++ ++ K +D L+M ++++ + ++L + DG + + A +F
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAA-NSYFNAVKGKIPFNVATYNTIIAGWSKI 308
E G + N L+ + AA + Y V I ++ TY T+I G K
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + + +++ G PD L+ GL + G+ A K+ + + +KD +Y
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+ +I+ G+L+EA + + +L D + L+S ++ A + L
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSL 858
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 109/247 (44%), Gaps = 1/247 (0%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
GF F+ LL R R++ A+ F +V++ V N ++S+ + +DEA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
+ Y ++ D T L+ A ++ RK +A+++ ++ +G P + ++
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 445 LCSFGPPHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
C A+ + + R K G S Y +++ + G + + +EM G
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ ++NG C +L A+ + +G P ++++S + + ++E+A + +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 564 LKIKAAR 570
+++K+ R
Sbjct: 404 MRMKSVR 410
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 171/365 (46%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +IH+Y V++ +L + + ++L + +G+ N+ T + + +G + + A+
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
+ E +T + N L++ CK + +A ++ K+ +V TYN++I G
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ G ++L M + G PD T+ S++ L ++ R+E+A +FD+L +K
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
+Y A+I + G +DEA +LS NC P+ T+ LI K+ +A + ++M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
+ G+ P+ T T I L G A +++ +G K Y + R G+
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
++ +M+E+G S D+ Y +I G ++GQ A V++ G PS+ + L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 547 YNKLL 551
LL
Sbjct: 714 IKHLL 718
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 169/391 (43%), Gaps = 39/391 (9%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ L + ID + + ++ + + T +++ L ++R +A+ +
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
EE G + + VL+ LC + A + KG +P NV TYN +I G+ K G
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP-NVITYNALINGYCKRGM 408
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ ++E M +P+ T++ L++G ++ + A+ + + ++E+ + + YN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE--------- 421
+I G+ D A + + PD TYT +I + K+++V +A +
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 422 --------------------------MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
ML++ML + +P++ T + I LC+ G A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
++ ++ K G + ++S +L+ RL + G + +++M SG D Y I
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
C G+L +A +M + G P YS L
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 174/406 (42%), Gaps = 20/406 (4%)
Query: 163 TLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLK----MLRDLR 218
+L+ +L + + F +W + P ++SY +L L ++ + K M++
Sbjct: 95 SLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCD 154
Query: 219 TEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV- 277
+ G + + L + R + YK I GC N LL L + V
Sbjct: 155 SVGDALYVLDLCRKMNKDERFELKYKLI----------IGC----YNTLLNSLARFGLVD 200
Query: 278 RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
Y ++ K+ N+ TYN ++ G+ K+G V + + + +VE G PD T+ SL+
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
G + ++ A K+F+ + K Y +I +DEA+ + + + C
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
P + TYT LI + + + ++AL ++ EM GI P+ T T I+ LCS A +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
+ + G ++ Y L+ + G +++ E M+ S + Y +I G C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ A+ V+ + L + P + Y+ L + S + AY+L
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 174/393 (44%), Gaps = 8/393 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D +Y ++ ++K +D K+ ++ +G N + + GL A+R+ +A+ +F
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK----GKIPFNVATYNTIIAGW 305
++ + VL++ LC A N VK I N+ TY +I
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEA---LNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ + +++L M+E G P+ T+++L+ G + G IEDA+ + + + + T
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN +I + ++ +A+ +L PD+ TY LI ++ A +L
Sbjct: 429 RTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +G+VP T TS I+ LC A ++ + G ++ Y L+ + GK
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
+ E+M + + +I+GLC G+L+ A L+ E+ + G P+ +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 546 LYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
L ++LL + AY F ++ ++ + +A +
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 121/246 (49%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+++LL L R G +++ +++ ++E YN M++ + +G+++EA +Y ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
DPD TYT LI + + + + A ++ +EM +G + T I LC
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 453 AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
AM ++ + + C ++ Y +L+ L + LN+ +EM+E+G ++ Y +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 513 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSN 572
+ LC+ + E A ++ + L KG P+ + Y+ L N +E A + +++ + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 573 ENARRF 578
N R +
Sbjct: 426 PNTRTY 431
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 170/442 (38%), Gaps = 58/442 (13%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
N +++ ++P D+ +YN ++ + D ++L + G+ + T + + D L
Sbjct: 450 LNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNV 295
+++RV +A +F + E+ G + L+ CK V A+ + K +P N
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP-NS 567
Query: 296 ATYNTIIAGWSKIGQVCQ-------MKKI----------------------------LEA 320
T+N +I G G++ + M KI +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M+ G PD T+ + +Q R GR+ DA + + E + Y+++I + +G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR------------------KVADALEM 422
+ A + + C+P T+ LI ++ + + +E+
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR-ARKAGCKISLSAYKLLLMRLS 481
L++M+ + P+ + I +C G A ++ R G S + LL
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ K + ++M G+ +E + +I GL G+ E V + L G+ L
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 542 IYSKLYNKLLASNKVERAYKLF 563
+ + + + VE Y+LF
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELF 889
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
K+ + Y LL L+RFG + ++ EM E ++ Y ++NG C +G +E A
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSNENA 575
+ + + G P Y+ L ++ A+K+F + +K R NE A
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 116/294 (39%), Gaps = 27/294 (9%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D H+Y ++ ++ + M+ +R G++ +L T S + G + A +
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIP-----FNVATYNTIIAG 304
+ G + L++ L + + + KG P N+ ++T++
Sbjct: 696 KRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ--------KGSEPELCAMSNMMEFDTVV-- 745
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
++LE MVE TP+ +++ L+ G+ G + A K+FD++ + +
Sbjct: 746 -----------ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 365 TS-VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+ V+NA++S + +EA K ++ P +++ LI K + +
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 424 DEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
+L G I+ + G A ++ K GCK S Y LL+
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 1/343 (0%)
Query: 222 ITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAA 280
+ +++ + I+ G A + K+ + EFGF + L+ CK+ + +A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 281 NSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGL 340
+ +F K + N TY +I G K G Q ++ E M EDG P+ T++ ++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 341 GRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDI 400
+ GR +DA ++FD + E+ YN +I L+EA K + S+ +P++
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 401 DTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
TY LI F K+ AL + ++ +G+ PS T + C G A + K
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 461 ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQ 520
+ G K S Y +L+ +R + + M+E G D+ Y +I+G C GQ
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 521 LENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ A + + + K P+ +IY+ + RA KL
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 162/352 (46%), Gaps = 1/352 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y ++ KK I+ + ++ G+ N T +++ +GL + + +++ +
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVC 312
E G + + N ++ LCK + A F+ ++ + + N+ TYNT+I G + ++
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ K+++ M DG P+ T+++L+ G G++ AL + +L + YN ++
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
S F GD A K + + P TYT LI F ++ + A+++ M G+V
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
P T + I C G + A ++K + C+ + Y +++ + G L +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+EM+E + ++ Y Y+I LC + + A ++E+ + G PS I S
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 155/337 (45%)
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK 290
++ + V++Q + +I F + GF + N LL + S S+FN K K
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
+ +V ++ +I G + G++ + +L + E GF+P+ + +L+ G + G IE A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+F + + V Y +I+ G + + Y + + P++ TY +++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
K + DA ++ DEM +G+ + T + I LC + A + + + G +L
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
Y L+ GK G L++ +++ G S + Y +++G C G A +++E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+G PS++ Y+ L + S+ +E+A +L L ++
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 5/392 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FFN + ++ D++S+ ++++ + I+ +L +L G + N+ + + DG
Sbjct: 151 FFNENKSKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC 208
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFN 294
+ + KA +F + G + + VL+ L K + + ++ G P N
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP-N 267
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
+ TYN ++ K G+ ++ + M E G + + T+++L+ GL R ++ +A K+ D
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ YN +I F VG L +A+ R L S P + TY L+S F +
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ A +M+ EM +GI PS T T I+ A+ + + G + Y
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
+L+ G+ +++ M E + +Y +I G C G A+ +++E K
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
P+ Y + L K + A +L K+
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MV++GF P + F+ LL + + F N + VL+ + +I G+
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-NENKSKVVLDVYSFGILIKGCCEAGE 178
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
++++ L P++ YT LI K ++ A ++ EM G+V + T T
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I L G +Y++ ++ G +L Y ++ +L + G+ +++EM+E G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
S ++ Y +I GLC +L A V+++ G P+ + Y+ L + K+ +A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 561 KLFLKIKA 568
L +K+
Sbjct: 359 SLCRDLKS 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 116/236 (49%), Gaps = 8/236 (3%)
Query: 137 KLNGKSAIESALANTGVDLSLDVVAKTLYRGNLG----GEAMVIFFNWAIKQPMIPKDIH 192
KLN + + + + G++ +L + TL G G G+A+ + + +K + +
Sbjct: 318 KLNEANKVVDQMKSDGINPNL-ITYNTLIDGFCGVGKLGKALSLCRD--LKSRGLSPSLV 374
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+YN+++ +K KM++++ GI + T +I+ D R+ + KAIQ+ +
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKIGQV 311
EE G D + +VL+ C + + A+ F + V+ N YNT+I G+ K G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+ K+L+ M E P+ +++ +++ L + + ++A ++ + +++ TS+
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT--KL 406
++ F+ +V+ +V ++ +N +++ + ++ ++ N +D Y+ L
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN---ENKSKVVLDVYSFGIL 169
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
I +A ++ + ++L E+ G P+ T+ I+ C G A ++ K G
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ Y +L+ L + G ++E+MQE G ++ Y ++N LC G+ ++A
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
V +E +G + + Y+ L L K+ A K+ ++K+ N N
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 181/415 (43%), Gaps = 38/415 (9%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
++ + + + K D +L + + + +GI NL TLSI+ + R +++ A G
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
+ G+ DT + + L+ LC V A + + G P + T N ++ G G+
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP-TLITLNALVNGLCLNGK 192
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQ-------------------------------- 338
V +++ MVE GF P+ T+ +L+
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 339 ---GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
GL + G +++A +F+ + K + + +Y +I F G D+ K R ++
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 396 CDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
PD+ ++ LI F+K K+ +A E+ EM+ +GI P T T TS I+ C A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
+ GC ++ + +L+ + L ++ +M G +D Y +I G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
C +G+LE A + +E + + P + Y L + L + + E+A ++F KI+ ++
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 178/394 (45%), Gaps = 2/394 (0%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD 234
V+ + ++ P ++ +Y +L+ + K +++LR + I ++ SI+ D
Sbjct: 197 VLLIDRMVETGFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH-VRAANSYFNAVKGKIPF 293
GL + + A +F E GF D L++ C A + +K KI
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+V ++ +I + K G++ + +++ + M++ G +PD T+ SL+ G + +++ A +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D +V K +N +I+ + +D+ ++ +R + D TY LI F +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ A E+ EM+ + + P + ++ LC G P A+ I+++ K+ ++ + Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+++ + K +++ + G D++ Y +I GLC G L A L+ +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G P+ Y+ L L ++ KL +IK
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 166/356 (46%), Gaps = 1/356 (0%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G N T V + ++ + A+++ EE D ++++ LCK + A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 281 NSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ FN ++ K ++ Y T+I G+ G+ K+L M++ TPD F +L+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+ G++ +A ++ ++++ +T Y ++I F LD+A ++S C P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
I T+ LI+ + KA + D LE+ +M +G+V T T + I+ C G A +++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ + +YK+LL L G+ L I+E++++S D+ +Y II+G+CN
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENA 575
++++A + KG P Y+ + L + A LF K++ + N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 154/341 (45%), Gaps = 4/341 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI Y ++R D K+LRD+ IT ++ S + D V+ ++ +A ++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ G DT + L+ CK + + AN + + KG P N+ T+N +I G+ K
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP-NIRTFNILINGYCK 399
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+ ++ M G D T+++L+QG G++E A ++F +V + +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y ++ G+ ++A++ + + + + DI Y +I A KV DA ++ +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
+G+ P T I LC G A +++++ + G + Y +L+ G
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+ EE++ G+S D + +++ L + G+L+ + L M
Sbjct: 580 KSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSFLDM 619
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 89/197 (45%)
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
D+A+ ++ + + P + +++L S + ++ L++ +M +GI + T++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I C A + K G + + L+ L G+ L + + M E G+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
+ ++NGLC G++ +AVL+++ + GF P+ + Y + + S + A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 562 LFLKIKAARSNENARRF 578
L K++ + +A ++
Sbjct: 234 LLRKMEERKIKLDAVKY 250
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 4/398 (1%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
EA++ F ++ I D++S+ ++ + + L L + G ++ T
Sbjct: 96 EAVISLFR-HLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS 154
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--G 289
+ +G R Y+A+ + G+ + N ++ LC++ V A +K G
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
P +V TYN++I G +IL M+ G +PD TF +L+ G+ G++ +A
Sbjct: 215 IRP-DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
K ++ ++++ YN++I+ G LDEA K L+S P+ TY LI+
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
+ KA++V D +++L M G+ T T + + C G AA + R G
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ + +LL L GK G L E++Q+S + Y II GLC ++E+A +
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
KG P + Y + L A++L+ K++
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 109/278 (39%), Gaps = 35/278 (12%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M E P F LL + + + E + +F +L + + +I F
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCAR 129
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L A+ ++ +P I T+ L++ F + +A+ ++D+++G G P+ +
Sbjct: 130 LSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT 189
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I+ LC G + A+ + K +K G + + Y L+ RL G G+ I +M G
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG 249
Query: 501 YSSD-----------------------------------MEVYEYIINGLCNIGQLENAV 525
S D + Y +INGLC G L+ A
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 526 LVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
V+ + KGF P+ + Y+ L N + +V+ K+
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
N + + P + +YN ++ K K +D +K+L + +G+ + T + + G
Sbjct: 312 LNVLVSKGFFPNAV-TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVA 296
+A + A ++ G G D + N+LL LC + +A + K K +
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TYN II G K +V + ++ G +PD T+ +++ GL R +A +++ +
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 357 VEKD 360
++D
Sbjct: 491 QKED 494
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 175/382 (45%), Gaps = 11/382 (2%)
Query: 188 PKDI-HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
P+D+ H ++ ++ K I+ + + +R+ G+ +L+ +++ + LV+ +
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
+IF + G + NVL+ K A + + KG P ++ TYNT+I+
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP-DIFTYNTLISV 247
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K + + + M G P+ T++S + G R GR+ +A ++F ++ D
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTAN 306
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y +I + + D+DEA++ + S P + TY ++ + ++ +A +L
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM G+ I P T + I C +A+ + K+ ++G K+ + +YK L + F
Sbjct: 367 EMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL---IHGFC 423
Query: 485 KCGMLLNIWEE---MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
K L N EE M E G+S Y ++++G N + + ++EE +G C
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 542 IYSKLYNKLLASNKVERAYKLF 563
+Y L ++ +V+ A LF
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLF 505
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 176/410 (42%), Gaps = 26/410 (6%)
Query: 180 WAIKQPMIP----KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
W I + M+ +IH YNV++ A K + K+L ++ +G+ ++ T + +
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
+ ++A+ + E G + + N + + +R A F +K + N
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH 307
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
TY T+I G+ ++ + + ++ E M GF+P T++S+L+ L GRI +A ++
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+ K + N +I+ + + D+ A+K + ++ + D+ +Y LI F K +
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLE 427
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ +A E L M+ +G P T + ++ + + + K G ++ Y+
Sbjct: 428 LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRG 487
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
L+ R+ + + ++E M++ G D ++ + G++ A
Sbjct: 488 LIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA----------- 536
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN--ARRFWRANG 583
++ +YN+ L N KL+ I A+ + +N R FW G
Sbjct: 537 ----SALFDVMYNRRLMVN-----LKLYKSISASYAGDNDVLRFFWSHVG 577
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 166/363 (45%), Gaps = 37/363 (10%)
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQ 310
+++ GF DT+ L + + +++ + + V+ +V +I G+ +
Sbjct: 81 HSQSLGFR-DTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 139
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ + +++E + + G PD +++L+ G + RI+DA ++ D + KD+ +T YN
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
MI + S G LD A+K LLS+NC P + TYT LI A + V +AL+++DEML +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL------------- 477
+ P T + I +C G A + + GC+ + +Y +LL
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 478 ----------------------MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
L R GK +N+ + M+E G + D Y+ +I
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENA 575
C G+L+ A+ +E + G P + Y+ + L + K ++A ++F K+ + N+
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 576 RRF 578
+
Sbjct: 439 SSY 441
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 152/337 (45%), Gaps = 1/337 (0%)
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIP 292
+G + R+ A ++ F DT + N+++ LC R + A N +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
V TY +I G V + K+++ M+ G PD T++++++G+ + G ++ A ++
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
NL K + YN ++ ++ G +E K + S CDP++ TY+ LI+ +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
K+ +A+ +L M +G+ P + I C G A+ + GC +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y +L L + GK L I+ ++ E G S + Y + + L + G A+ ++ E +
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
G P + Y+ + + L V+ A++L + +++
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y +++ A + +D LK++ ++ + G+ ++ T + + G+ + V +A ++ N
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQV 311
E G D S N+LL+ L + + K NV TY+ +I + G++
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ +L+ M E G TPD ++D L+ R GR++ A++ + ++ + + YN +
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
++ G D+A++ + L C P+ +Y + SA + AL M+ EM+ GI
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P T S I LC G A + R S+ Y ++L+ + + +N
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 492 IWEEMQESGYSSDMEVYEYIINGL 515
+ E M +G + Y +I G+
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGI 553
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 165/359 (45%), Gaps = 3/359 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D +YN+++ +L + +D LK+L L ++ + T +I+ + + V +A+++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFN-AVKGKIPFNVATYNTIIAGWSK 307
G D + N +++ +CK V RA N +KG P +V +YN ++
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP-DVISYNILLRALLN 310
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G+ + +K++ M + P+ T+ L+ L R G+IE+A+ + + EK +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y+ +I+ F G LD AI++ ++S+ C PDI Y +++ K K ALE+ ++
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G P++ + + L S G A+ + G Y ++ L R G
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ +M+ + + Y ++ G C ++E+A+ V+E + G P+ Y+ L
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 171/390 (43%), Gaps = 5/390 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +YN ++ K ID ++L +R++ + + T +I+ L ++ A+++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ +L++ V A + + +G P ++ TYNTII G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP-DMFTYNTIIRGMCK 275
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G V + +++ + G PD +++ LL+ L G+ E+ K+ + +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y+ +I+ G ++EA+ + + PD +Y LI+AF + ++ A+E L+ M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G +P + + LC G A+ I+ + + GC + S+Y + L G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
L++ EM +G D Y +I+ LC G ++ A ++ + F PS + Y+ +
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 548 NKLLASNKVERAYKLFLKI--KAARSNENA 575
++++E A + + R NE
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETT 545
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 162/345 (46%), Gaps = 5/345 (1%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE-FGFGCDTESLNVLLQCLCKRSHVRA 279
G+ ++ +L+ + + L++ QR +F N++E FG + + N+L++ LCK++ + +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 280 ANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
A + + G +P N+ TY TI+ G+ G + K++LE M++ G+ PD +T+ L+
Sbjct: 210 AYKVLDEIPSMGLVP-NLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
G + GR +A + D++ + + Y MI EA + +L +
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
PD K+I A + KV +A + +ML +P +++ I LC G A +
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
+ K G SL Y L+ + G+ +W++M E + Y +I GL
Sbjct: 389 FDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
G ++ V V+EE L G P++ + L+ L K E A K+
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 169/399 (42%), Gaps = 13/399 (3%)
Query: 173 AMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL-ETLSI 231
A+ IF P + +Y+ IL L + + D + ++ DLR + E L I
Sbjct: 65 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFI 124
Query: 232 VADGLVR----AQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV 287
L+R A R +++IF +FG SLN LL L + ++ F
Sbjct: 125 ---DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 288 K---GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
K G P N+ T N ++ K + K+L+ + G P+ T+ ++L G G
Sbjct: 182 KESFGITP-NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG 240
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+E A ++ + ++++ + + + Y ++ + +G EA + N +P+ TY
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
+I A K +K +A M DEML + +P + I+ LC A ++++ K
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
C + L+ L + G+ +++E E G + Y +I G+C G+L A
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ ++ + P+ Y+ L L + V+ ++
Sbjct: 420 GRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 138/331 (41%), Gaps = 38/331 (11%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +I + N++++AL KK I+ K+L ++ + G+ NL T + + G V + A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGW 305
++ + G+ D + VL+ CK A + + + K +I N TY +I
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 306 SKIGQVCQMKKILEAMVEDGFTPD----CSTFD--------------------------- 334
K + + + + + M+E F PD C D
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 335 ----SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
+L+ L + GR+ +A K+FD EK + YN +I+ G+L EA + +
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ C P+ TY LI K V + + +L+EML G P+ T E L G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
AM I A G K+ +++L L + +
Sbjct: 486 EEDAMKIVSMAVMNG-KVDKESWELFLKKFA 515
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 11/280 (3%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP-DC--STFDSLLQGLGRAGRIEDAL 350
N TY++I+ S+ ++ ++ A + + + P C + F LL+ G AGR E ++
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLM-ADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSM 140
Query: 351 KIF----DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+IF D V++ ++ N +I N DL A+ + S P+I T L
Sbjct: 141 RIFLRIPDFGVKRSVRSLNTLLNVLIQN--QRFDLVHAM-FKNSKESFGITPNIFTCNLL 197
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ A K + A ++LDE+ G+VP+ T T+ + + G +A + + G
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ Y +L+ + G+ + ++M+++ + Y +I LC + A
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+ +E L + F P + K+ + L +KV+ A L+ K+
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 175/381 (45%), Gaps = 36/381 (9%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+ +Y+ ++ LGK++ ID ++ +L+++ T G+ N+ T +I L RA ++ +A +I
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKIG 309
++ G G D + VL+ LC + A F +K G+ + TY T++ +S
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ +K+ M +DG PD TF L+ L +AG +A D + ++ +
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL------- 395
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
P++ TY LI ++ ++ DALE+ M
Sbjct: 396 ----------------------------PNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G+ P+ T FI+ G +A+ +++ + G ++ A L L++ G+
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
I+ +++ G D Y ++ +G+++ A+ ++ E + G P ++ + L N
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 550 LLASNKVERAYKLFLKIKAAR 570
L +++V+ A+K+F+++K +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMK 568
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 150/315 (47%), Gaps = 12/315 (3%)
Query: 272 CKRSHVRAANSYFN------AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG 325
CK ++V A + F V+ K+P TYN +I G + + + + + G
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLP----TYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
PD +T++ LL G++G+I++ +++ + + T +N +IS + G++D+A+
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 386 KYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
Y L+S+ + P TY LI K+ ++ +A ++ + ML G P+ I
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
G AA ++KR K G + L Y +L+ L G+ L+ ++E++ESG + D
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 505 MEVYEYIINGLCNIGQLENA-VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ Y IINGL +LE A VL E +G P Y+ L L + VE A K++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 564 LKIKAARSNENARRF 578
+I+ A N F
Sbjct: 1056 NEIQRAGLEPNVFTF 1070
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 171/403 (42%), Gaps = 36/403 (8%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F++ K +P D+ ++ +++ AL K L +R +GI NL T + + GL
Sbjct: 350 FWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVA 296
+R R+ A+++FGN E G +
Sbjct: 409 LRVHRLDDALELFGNMESLG----------------------------------VKPTAY 434
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY I + K G + E M G P+ ++ L L +AGR +A +IF L
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ V ++ YN M+ + VG++DEAIK ++ N C+PD+ LI+ KA +V
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+A +M M + P+ T + + L G A+ +++ + GC + + L
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
L + + + L + +M + G D+ Y II GL GQ++ A+ + + K
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLV 673
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFW 579
P + L ++ ++ +E AYK+ +++ A FW
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 154/328 (46%), Gaps = 35/328 (10%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP D+ +YN +L A GK ID + ++ +++ T N T +IV GLV+A
Sbjct: 817 IP-DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA------- 868
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
GN ++ +L++ + R A TY +I G S
Sbjct: 869 ---GNVDD--------ALDLYYDLMSDRDFSPTA---------------CTYGPLIDGLS 902
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
K G++ + K++ E M++ G P+C+ ++ L+ G G+AG + A +F +V++ +
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
Y+ ++ VG +DE + Y++ L + +PD+ Y +I+ K+ ++ +AL + +EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 427 -LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+GI P T S I L G A IY ++AG + ++ + L+ S GK
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIIN 513
+++ M G+S + YE + N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 187/440 (42%), Gaps = 59/440 (13%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
EA IF + +K + D +YN++++ K ID +K+L ++ G ++ ++
Sbjct: 486 EAKQIF--YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGF---------------------------------G 258
+ + L +A RV +A ++F +E G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 259 C--DTESLNVLLQCLCKRSHVR-AANSYFNAVK-GKIPFNVATYNTIIAGWSKIGQV--- 311
C +T + N L CLCK V A F + G +P +V TYNTII G K GQV
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP-DVFTYNTIIFGLVKNGQVKEA 662
Query: 312 -C---QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
C QMKK++ PD T +LL G+ +A IEDA KI N + ++
Sbjct: 663 MCFFHQMKKLV--------YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 368 Y-NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT-YTKLISAFIKARKVADALEMLDE 425
+ +I + ++ +D A+ + L++N D D+ +I K V+ A + ++
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 426 MLGQ-GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
G+ P T I L A ++ + + GC ++ Y LL + G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV-LVMEESLHKGFCPSRLIY 543
K L +++EM ++ + +I+GL G +++A+ L + + F P+ Y
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 544 SKLYNKLLASNKVERAYKLF 563
L + L S ++ A +LF
Sbjct: 895 GPLIDGLSKSGRLYEAKQLF 914
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 1/304 (0%)
Query: 261 TESLNVLLQCLCKRSHVRAANSYFNAVKGKI-PFNVATYNTIIAGWSKIGQVCQMKKILE 319
TE+ N +L+ L + F+ ++ +I + TY TI S G + Q L
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M E GF + +++ L+ L ++ +A++++ ++ + + Y++++
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
D+D + + + + P++ T+T I +A K+ +A E+L M +G P T T
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
I+ LC+ A ++++ + K Y LL R S + W EM++
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G+ D+ + +++ LC G A ++ +G P+ Y+ L LL ++++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 560 YKLF 563
+LF
Sbjct: 418 LELF 421
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 6/292 (2%)
Query: 285 NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEA-----MVEDGFTPDCSTFDSLLQG 339
N V G + F+ + W + C + + + M+ PD S+ + + +G
Sbjct: 32 NLVTGGLKFHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRG 91
Query: 340 LGRAGRIEDALKIFDNLVEK-DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
L + + F ++ + V T N M+ G L+E + +
Sbjct: 92 LKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR 151
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D +TY + + + A L +M G V + + I L AM +Y
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
+R G + SL Y L++ L + ++ + +EM+ G ++ + I L
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
G++ A +++ +G P + Y+ L + L + K++ A ++F K+K R
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 7/287 (2%)
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKK---I 317
+ NV++ LCK + A +K G P NV +YNT+I G+ K+G +M K +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSP-NVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
L+ MVE+ +P+ +TF+ L+ G + + ++K+F ++++D YN++I+ +
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
G + EAI ++S P++ TY LI+ F K + +AL+M + GQG VP+T
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
I+ C G + + + G + Y L+ L R G +++++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
G D+ + ++ G C G+ A ++++E G P L Y+
Sbjct: 464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 170/362 (46%), Gaps = 6/362 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQ---RVY 243
I ++ ++NV++ AL K ++ ++ D++ G + N+ + + + DG + ++Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTII 302
KA + E + + N+L+ K ++ + F + + + NV +YN++I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G G++ + + + MV G P+ T+++L+ G + +++AL +F ++ + V
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
T +YN +I + +G +D+ + PD+ TY LI+ + + A ++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
D++ +G+ P T +E C G A M+ K K G K Y +++ +
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 483 FGKCGMLLNIWEEMQ-ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
G N+ +M+ E ++ Y ++ G G+LE+A +++ E L KG P+R+
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 542 IY 543
Y
Sbjct: 578 TY 579
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 184/437 (42%), Gaps = 66/437 (15%)
Query: 153 VDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIP-------KDIHSYNVILRALGKKK 205
D++ + + + L L + + +++W +K I K +HS R +
Sbjct: 63 TDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRS 122
Query: 206 FIDFMLKMLRDLRTEGI------TVNLETLSIVADGLVRA----QRVYKAIQIFGNTEEF 255
F+D ++ D + I N+ SI+AD LV A R + F + +
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 256 GFGCDTESLNVLLQCLCKRSHVRAANS---YFNAVKGKIPFNVATYNTIIAGWSKIGQVC 312
G+ S L+ L K + R+A+ Y ++ KI NV T+N +I K G++
Sbjct: 183 GYKLSALSCKPLMIALLKEN--RSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQG---LGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ + ++E M G +P+ ++++L+ G LG G++ A + +VE
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE----------- 289
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
N+ P++ T+ LI F K + ++++ EML Q
Sbjct: 290 ------------------------NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
+ P+ + S I LC+ G A+ + + AG + +L Y L ++ F K ML
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL---INGFCKNDML 382
Query: 490 ---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
L+++ ++ G +Y +I+ C +G++++ + EE +G P Y+ L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 547 YNKLLASNKVERAYKLF 563
L + +E A KLF
Sbjct: 443 IAGLCRNGNIEAAKKLF 459
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 158/378 (41%), Gaps = 68/378 (17%)
Query: 181 AIKQPMIPKDIH----SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
A+ + M+ D+ ++N+++ K + +K+ +++ + + N+ + + + +GL
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFN 294
++ +AI + G + + N L+ CK ++ A F +VKG+ +P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP-T 400
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
YN +I + K+G++ + E M +G PD T++ L+ GL R G IE A K+FD
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
L K PD+ T+ L+ + +
Sbjct: 461 QLTSKGL------------------------------------PDLVTFHILMEGYCRKG 484
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM-MIYKRARKAGCKISLSAY 473
+ A +L EM G+ P T ++ C G AA M + ++ ++++++Y
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 474 KLLLMRLSRFGK---CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+LL S+ GK MLLN EM E G + YE +V EE
Sbjct: 545 NVLLQGYSQKGKLEDANMLLN---EMLEKGLVPNRITYE----------------IVKEE 585
Query: 531 SLHKGFCPSRLIYSKLYN 548
+ +GF P I L+N
Sbjct: 586 MVDQGFVPD--IEGHLFN 601
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 88/175 (50%), Gaps = 7/175 (4%)
Query: 180 WAIKQPM----IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+A+K+ M I D+ +YN ++ L + I+ K+ L ++G+ +L T I+ +G
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEG 479
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG--KIPF 293
R KA + + G + N++++ CK +++AA + ++ ++
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
NVA+YN ++ G+S+ G++ +L M+E G P+ T++ + + + G + D
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
Y+ ++ P++ T+ +I+A K K+ A +++++M G P+ + + I+ C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 448 FG---PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
G + A + K + +L+ + +L+ + + +++EM + +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 505 MEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFL 564
+ Y +INGLCN G++ A+ + ++ + G P+ + Y+ L N ++ ++ A +F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 565 KIKAARSNENARRF 578
+K + R +
Sbjct: 391 SVKGQGAVPTTRMY 404
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 26/259 (10%)
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD-------- 382
S S L G R G IF + D V N++I++ + + +
Sbjct: 118 SKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV----CVNSIIADMLVLAYANNSRFELGF 173
Query: 383 EAIK---YYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
EA K YY LS +C P L+ A +K + AD + EM+ + I P+ T
Sbjct: 174 EAFKRSGYYGYKLSALSCKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN---IWEE 495
I LC G + A + + + GC ++ +Y L+ + G G + + +E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M E+ S ++ + +I+G L ++ V +E L + P+ + Y+ L N L K
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 556 VERAYKLFLKIKAARSNEN 574
+ A + K+ +A N
Sbjct: 347 ISEAISMRDKMVSAGVQPN 365
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 195/436 (44%), Gaps = 56/436 (12%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K+ + D+++Y +++ + K I+ K ++R G T N+ T + + ++A++
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IP------- 292
V A ++F G + + + L+ CK V A F + G +P
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 293 --------FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
NV TY ++ G+ K +V + +K+L+AM +G P+ +D+L+ GL + G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
++++A ++ + E + Y+++I + V D A K +L N+C P++ YT
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
++I K K +A +++ M +G P+ T T+ I+ G + + +R
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES-------GYSSDME----------- 506
G + Y++L+ + G + N+ EEM+++ GY +E
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 827
Query: 507 ---------------VYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
VY +I+ L +LE A+ ++EE F + + YS YN L+
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLI 885
Query: 552 AS----NKVERAYKLF 563
S NKVE A++LF
Sbjct: 886 ESLCLANKVETAFQLF 901
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 164/373 (43%), Gaps = 19/373 (5%)
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
++R++ +G + T S V + L A ++ A +F + G D + +++ C
Sbjct: 429 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 488
Query: 273 KRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
K + A +FN ++ G P NV TY +I + K +V ++ E M+ +G P+
Sbjct: 489 KAGLIEQARKWFNEMREVGCTP-NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY----------------NAMISN 374
T+ +L+ G +AG++E A +IF+ + V + +Y A++
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 607
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
F ++EA K + C+P+ Y LI K K+ +A E+ EM G +
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWE 494
T +S I+ A + + + C ++ Y ++ L + GK + +
Sbjct: 668 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 727
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
M+E G ++ Y +I+G IG++E + ++E KG P+ + Y L + +
Sbjct: 728 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 787
Query: 555 KVERAYKLFLKIK 567
++ A+ L ++K
Sbjct: 788 ALDVAHNLLEEMK 800
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 31/327 (9%)
Query: 260 DTESLNVLLQCLCKR--SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKI 317
D +SLN L L ++ S + AA N + NV+++ + K + +
Sbjct: 379 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKI------NVSSFTRCLCSAGKYEKAFS---V 429
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
+ M+ GF PD ST+ +L L A ++E A +F+ + V + Y M+ +F
Sbjct: 430 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK 489
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
G +++A K++ + C P++ TYT LI A++KA+KV+ A E+ + ML +G +P+ T
Sbjct: 490 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 549
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCK------------------ISLSAYKLLLMR 479
++ I+ C G A I++R G K ++ Y LL
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 607
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
+ + + + M G + VY+ +I+GLC +G+L+ A V E GF +
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667
Query: 540 RLIYSKLYNKLLASNKVERAYKLFLKI 566
YS L ++ + + A K+ K+
Sbjct: 668 LYTYSSLIDRYFKVKRQDLASKVLSKM 694
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 166/406 (40%), Gaps = 53/406 (13%)
Query: 173 AMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIV 232
A++ FF WA +Q YN ++ + + + L+ +R + V E L+++
Sbjct: 106 AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVL 165
Query: 233 ADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIP 292
R A++ G ++F F + N L+Q K + +A+
Sbjct: 166 VRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS----------- 214
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
+ + L + DGFT C + L + G+ +AL +
Sbjct: 215 ------------------LIHREMSLANLRMDGFTLRCFAY-----SLCKVGKWREALTL 251
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
+ +++V +T Y +IS +EA+ + + + +C P++ TY+ L+ +
Sbjct: 252 VET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 308
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+++ +L+ M+ +G PS S + C+ G A + K+ K G
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368
Query: 473 YKLLLMRLSRFGKCG-------MLLNIWE----EMQESGYSSDMEVYEYIINGLCNIGQL 521
Y +L+ + CG LL++ E EM +G + LC+ G+
Sbjct: 369 YNILIGSI-----CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423
Query: 522 ENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
E A V+ E + +GF P YSK+ N L ++K+E A+ LF ++K
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 38/289 (13%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y+ ++ L K +D ++ ++ G L T S + D + +R A ++
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQV 311
E + ++ LCK A + KG P NV TY +I G+ IG++
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP-NVVTYTAMIDGFGMIGKI 754
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
++LE M G P+ T+ L+ + G ++ A + + + + + T+ Y +
Sbjct: 755 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 814
Query: 372 ISNF-----ISVGDLDEA--------IKYYRCLLSNNCDPD------------------- 399
I F S+G LDE + YR L+ N
Sbjct: 815 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874
Query: 400 ID---TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+D TY LI + A KV A ++ EM +G++P + S I+ L
Sbjct: 875 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 923
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 39/342 (11%)
Query: 135 LQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSY 194
L++ A E AL N G+ + + L + N G A+ FF W +QP D H+Y
Sbjct: 309 LRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALG-FFYWLKRQPGFKHDGHTY 367
Query: 195 NVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE 254
++ LG+ K + K+L ++ +G N T + + RA + +A+ +F +E
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 255 FG-----------------------------------FGCDTESLNVLLQCLCKRSHVRA 279
G DT + +V++ CL K H+ A
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 280 ANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
A+ F + +G P N+ TYN ++ +K K+ M GF PD T+ ++
Sbjct: 488 AHKLFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
+ LG G +E+A +F + +K+++ + VY ++ + G++++A ++Y+ +L
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
P++ T L+S F++ K+A+A E+L ML G+ PS T T
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 6/275 (2%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T++ + Q + K+L+ MV DG P+ T++ L+ GRA + +A+ +F+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
E + Y +I G LD A+ Y+ + + PD TY+ +I+ KA +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A ++ EM+ QG P+ T ++ A+ +Y+ + AG + Y ++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 477 LMRLSRFGKCGMLLN---IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+ L G CG L ++ EMQ+ + D VY +++ G +E A + LH
Sbjct: 546 MEVL---GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
G P+ + L + L NK+ AY+L + A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D TYT ++ +A++ ++LDEM+ G P+T T I + AM ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
+ ++AGCK Y L+ ++ G + +++++ MQ G S D Y IIN L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
G L A + E + +G P+ + Y+ + + + + A KL+ ++ A
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 157/342 (45%), Gaps = 39/342 (11%)
Query: 135 LQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSY 194
L++ A E AL N G+ + + L + N G A+ FF W +QP D H+Y
Sbjct: 309 LRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALG-FFYWLKRQPGFKHDGHTY 367
Query: 195 NVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE 254
++ LG+ K + K+L ++ +G N T + + RA + +A+ +F +E
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 255 FG-----------------------------------FGCDTESLNVLLQCLCKRSHVRA 279
G DT + +V++ CL K H+ A
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 280 ANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
A+ F + +G P N+ TYN ++ +K K+ M GF PD T+ ++
Sbjct: 488 AHKLFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
+ LG G +E+A +F + +K+++ + VY ++ + G++++A ++Y+ +L
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
P++ T L+S F++ K+A+A E+L ML G+ PS T T
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 6/275 (2%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T++ + Q + K+L+ MV DG P+ T++ L+ GRA + +A+ +F+ +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
E + Y +I G LD A+ Y+ + + PD TY+ +I+ KA +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A ++ EM+ QG P+ T ++ A+ +Y+ + AG + Y ++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 477 LMRLSRFGKCGMLLN---IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+ L G CG L ++ EMQ+ + D VY +++ G +E A + LH
Sbjct: 546 MEVL---GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
G P+ + L + L NK+ AY+L + A
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D TYT ++ +A++ ++LDEM+ G P+T T I + AM ++
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
+ ++AGCK Y L+ ++ G + +++++ MQ G S D Y IIN L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
G L A + E + +G P+ + Y+ + + + + A KL+ ++ A
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 188/441 (42%), Gaps = 43/441 (9%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
+A+ +F + +P I ++ +L A+ K D ++ + ++ GI+ NL T SI
Sbjct: 58 DAIGLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KG 289
+ R ++ A+ I G + G+G +LN LL C + + A + + + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG----- 344
P + T+ T++ G + + + ++E MV G PD T+ +++ GL + G
Sbjct: 176 YQP-DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 345 ------------------------------RIEDALKIFDNLVEKDYVLETSVYNAMISN 374
++DA +F+ + K + YN +IS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML-GQGIVP 433
+ G +A + +L N +PD+ + LI AF+K K+ +A ++ DEM+ + P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+ I+ C + M +++ + G + Y L+ + C ++
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
++M G D+ Y +++GLCN G +E A++V E + + Y+ + L +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 554 NKVERAYKLF--LKIKAARSN 572
KVE + LF L +K + N
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPN 495
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 161/359 (44%), Gaps = 2/359 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D ++ ++ L + + ++ + +G +L T V +GL + A+ +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
E+ D N ++ LCK H+ A FN ++ K I +V TYN +I+
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV- 367
G+ ++L M+E PD F++L+ + G++ +A K++D +V+ + V
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN +I F ++E ++ +R + + TYT LI F +AR +A + +M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ P T ++ LC+ G A+++++ +K K+ + Y ++ L + GK
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+++ + G ++ Y +++G C G E A + E G P+ Y+ L
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 172/413 (41%), Gaps = 44/413 (10%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGKKKFIDFMLK 212
++ + L++ N EA+ + +K QP D+ +Y ++ L K+ D L
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQP----DLVTYGAVINGLCKRGEPDLALN 236
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L + I ++ + + DGL + + + A +F E G D + N L+ CLC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 273 KRSHVRAANS---------------YFNA---------------------VKGKIPF-NV 295
A+ +FNA VK K F +V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
YNT+I G+ K +V + ++ M + G + T+ +L+ G +A ++A +F
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+V + YN ++ + G+++ A+ + + + DI TYT +I A KA K
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
V D ++ + +G+ P+ T T+ + C G A ++ ++ G + Y
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
L+ R G + +EM+ G++ D + + N L + G+L+ + L M
Sbjct: 537 LIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDKSFLDM 588
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 100/224 (44%)
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+++DA+ +F ++V+ ++ ++S + D I + + ++ TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
I+ F + +++ AL +L +M+ G PS T+ S + C A+ + + +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G + + L+ L + K + + E M G D+ Y +INGLC G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+ ++ + +IY+ + + L ++ A+ LF K++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%)
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
LD+AI + ++ + P I ++KL+SA K K + + ++M GI + T +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
FI C A+ I + K G S+ LL + + + ++M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
Y D + +++GL + AV ++E + KG P + Y + N L + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 561 KLFLKIKAAR 570
L K++ +
Sbjct: 236 NLLNKMEKGK 245
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 204/488 (41%), Gaps = 31/488 (6%)
Query: 100 PTAHPYRNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDV 159
P A Y + E V LL E K R + + + ++ ++ +D + ++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 160 VA------------------KTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRAL 201
V KT + + G+AM + +K+ I DI YN ++ L
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL--KEMKEQGIAPDIFCYNSLIIGL 497
Query: 202 GKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDT 261
K K +D L ++ G+ N T G + A A + E G +
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 262 ESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEA 320
L+ CK+ V A ++Y + V I + TY ++ G K +V ++I
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M G PD ++ L+ G + G ++ A IFD +VE+ +YN ++ F G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+++A + + P+ TY +I + K+ +A+A + DEM +G+VP + T+
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES- 499
++ C A+ I+ +K GC S + + L+ + +FGK + + + +
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 500 ----GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
G +D+ Y +I+ LC G LE A + + + P+ + Y+ L N +K
Sbjct: 797 FDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN---GYDK 852
Query: 556 VERAYKLF 563
+ R ++F
Sbjct: 853 MGRRAEMF 860
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 190/434 (43%), Gaps = 40/434 (9%)
Query: 182 IKQPMIPKDI----HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
+K+ MI K + ++Y+V++ L K K ++ +L ++ + G++++ T S++ DGL+
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 238 RAQR-------VYKAIQIFGNTEEFGFGC----------------------------DTE 262
+ + V++ + N + + + C +
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAM 321
+ L++ C+ +VR +K + I + TY T++ G G + I++ M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
+ G P+ + +L++ + R DA+++ + E+ + YN++I +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
DEA + ++ N P+ TY IS +I+A + A A + + EM G++P+ T
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I C G A Y+ G Y +L+ L + K I+ EM+ G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
+ D+ Y +ING +G ++ A + +E + +G P+ +IY+ L S ++E+A +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 562 LFLKIKAARSNENA 575
L ++ + NA
Sbjct: 684 LLDEMSVKGLHPNA 697
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 163/390 (41%), Gaps = 6/390 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F+ I +IP+ +Y ++ ++K + ++L +++ I ++ T V G+
Sbjct: 369 LFDGMIASGLIPQ-AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESL--NVLLQCLCKRSHVRAANSYFNAVKGK-IPF 293
+ + A I E GC + L++ + S A +K + I
Sbjct: 428 CSSGDLDGAYNIV--KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ YN++I G SK ++ + + L MVE+G P+ T+ + + G A A K
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ E + + +I+ + G + EA YR ++ D TYT L++ K
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
KV DA E+ EM G+GI P + I G A I+ + G ++ Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+LL R G+ + +EM G + Y II+G C G L A + +E
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
KG P +Y+ L + N VERA +F
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 167/380 (43%), Gaps = 7/380 (1%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
+ Y+ + + K+ ++ + + G+ + + + +G R + V + ++
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF----NVATYNTIIAGWSK 307
++ + +++ +C + A +N VK I NV Y T+I + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+ ++L+ M E G PD ++SL+ GL +A R+++A +VE
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y A IS +I + A KY + + P+ T LI+ + K KV +A M+
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
QGI+ T T + L A I++ R G + +Y +L+ S+ G
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
+I++EM E G + ++ +Y ++ G C G++E A +++E KG P+ + Y +
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 548 NKLLASNKVERAYKLFLKIK 567
+ S + A++LF ++K
Sbjct: 705 DGYCKSGDLAEAFRLFDEMK 724
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 165/381 (43%), Gaps = 14/381 (3%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D +Y V++ L K +D ++ R++R +GI ++ + ++ +G + + KA
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAG 304
IF E G + N+LL C+ + A + +VKG P N TY TII G
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP-NAVTYCTIIDG 706
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K G + + ++ + M G PD + +L+ G R +E A+ IF +K
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASS 765
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD----PDIDTYTKLISAFIKARKVADAL 420
T+ +NA+I+ G + + L+ + D P+ TY +I K + A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL 480
E+ +M ++P+ T TS + G ++ A AG + Y +++
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 481 SRFGKCGMLLNIWEEM-----QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
+ G L + ++M + G + +++G +G++E A VME +
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 536 FCPSRLIYSKLYNK-LLASNK 555
+ P +L N+ ++SN+
Sbjct: 946 YIPDSATVIELINESCISSNQ 966
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 171/392 (43%), Gaps = 18/392 (4%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
E V F+ ++ ++P+ + V+L AL + +D + + + + +++T +
Sbjct: 168 EEAVFVFSSSMGLELVPR-LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 232 VADGLVRAQRVYKAIQIFGNTE-EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK 290
+ RA V + TE EF T +LNV K S + KG
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEF----RTATLNVDGALKLKESMI---------CKGL 273
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
+P TY+ +I G KI ++ K +L M G + D T+ L+ GL + GR DA
Sbjct: 274 VPLKY-TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAA 331
Query: 351 K-IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
K + +V ++ +Y+ I G +++A + ++++ P Y LI
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
+ + + V E+L EM + IV S T + ++ +CS G A I K +GC+ +
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ Y L+ + + G + + +EM+E G + D+ Y +I GL +++ A +
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
E + G P+ Y + + +++ A K
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 144/343 (41%), Gaps = 35/343 (10%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F+ +++ + P ++ YN++L + I+ ++L ++ +G+ N T + DG
Sbjct: 650 FDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVAT 297
++ + +A ++F + G D+ L+ C+ + V A + F K + A
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP 768
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGF----TPDCSTFDSLLQGLGRAGRIEDALKIF 353
+N +I K G+ ++L +++ F P+ T++ ++ L + G +E A ++F
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + + Y ++++ + +G E + ++ +PD Y+ +I+AF+K
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
AL ++D+M K A GCK+S+S
Sbjct: 889 GMTTKALVLVDQMFA------------------------------KNAVDDGCKLSISTC 918
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
+ LL ++ G+ + + E M Y D +IN C
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 179/423 (42%), Gaps = 38/423 (8%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF I P + +YN+++ + K+ ++ + +++ G+ + T + + DG
Sbjct: 117 FFKDMIGAGARPT-VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNV 295
+ R+ + F ++ D + N L+ C CK + ++ +KG + NV
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
+Y+T++ + K G + Q K M G P+ T+ SL+ + G + DA ++ +
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+++ Y A+I + EA + + + + P++ +Y LI F+KA+
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
+ ALE+L+E+ G+GI P +FI LCS AA ++ ++ G K + Y
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415
Query: 476 LLMRLSRFGKCGMLLNIWEEMQE------------------------------------S 499
L+ + G L++ +EM+E
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G ++ ++ +I+GLC Q+E A + E+ + KG P R Y+ L + V A
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 560 YKL 562
L
Sbjct: 536 LAL 538
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 145/320 (45%), Gaps = 7/320 (2%)
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTI 301
+AIQ F + F T S N LL K +F + G P V TYN +
Sbjct: 78 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP-TVFTYNIM 136
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I K G V + + E M G PD T++S++ G G+ GR++D + F+ + KD
Sbjct: 137 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM--KDM 194
Query: 362 VLETSV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
E V YNA+I+ F G L +++YR + N P++ +Y+ L+ AF K + A
Sbjct: 195 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 254
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
++ +M G+VP+ T TS I+ C G A + + G + ++ Y L+
Sbjct: 255 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 314
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
L + ++ +M +G ++ Y +I+G ++ A+ ++ E +G P
Sbjct: 315 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 374
Query: 540 RLIYSKLYNKLLASNKVERA 559
L+Y L + K+E A
Sbjct: 375 LLLYGTFIWGLCSLEKIEAA 394
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 144/307 (46%), Gaps = 3/307 (0%)
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEA 320
+ N+++ C+CK V AA F +K G +P + TYN++I G+ K+G++ E
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M + PD T+++L+ + G++ L+ + + Y+ ++ F G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+ +AIK+Y + P+ TYT LI A K ++DA + +EML G+ + T T+
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I+ LC A ++ + AG +L++Y L+ + L + E++ G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
D+ +Y I GLC++ ++E A +VM E G + LIY+ L + S
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430
Query: 561 KLFLKIK 567
L ++K
Sbjct: 431 HLLDEMK 437
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 132/270 (48%)
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
N ++ ++K+G+ +K+ + M+ G P T++ ++ + + G +E A +F+ +
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+ V +T YN+MI F VG LD+ + ++ + C+PD+ TY LI+ F K K+
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM 478
LE EM G G+ P+ + ++ ++ C G A+ Y R+ G + Y L+
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278
Query: 479 RLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
+ G + EM + G ++ Y +I+GLC+ +++ A + + G P
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338
Query: 539 SRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+ Y+ L + + + ++RA +L ++K
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELKG 368
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 198/489 (40%), Gaps = 26/489 (5%)
Query: 96 ANAAPTAHPYRNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDL 155
A A PT Y +E V A L E K RG+ + S I+ +D
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD- 182
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAI-------KQPM------------IPKDIHSYNV 196
D V ++ E VI +N I K P+ + ++ SY+
Sbjct: 183 --DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 197 ILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG 256
++ A K+ + +K D+R G+ N T + + D + + A ++ + G
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQM 314
+ + L+ LC ++ A F + G IP N+A+YN +I G+ K + +
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP-NLASYNALIHGFVKAKNMDRA 359
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
++L + G PD + + + GL +IE A + + + E + +Y ++
Sbjct: 360 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 419
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ-GIVP 433
+ G+ E + + + + + T+ LI K + V+ A++ + + G+
Sbjct: 420 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 479
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+ T+ I+ LC AA ++++ + G +AY L+ + G L +
Sbjct: 480 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 539
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
++M E G D+ Y ++ GL + QL+ A +EE + +G P ++ + K
Sbjct: 540 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYEL 599
Query: 554 NKVERAYKL 562
++ A +L
Sbjct: 600 GCIDEAVEL 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%)
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
P FD+L L G +E+A++ F + +T N ++ F +G D+ +
Sbjct: 57 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
+++ ++ P + TY +I K V A + +EM +G+VP T T S I+
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDME 506
G + ++ + C+ + Y L+ +FGK + L + EM+ +G ++
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236
Query: 507 VYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
Y +++ C G ++ A+ + G P+ Y+ L + + A++L
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%)
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
V++A+ S I +G L+EAI+ + + P + L+ F K K D +M
Sbjct: 62 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
+G G P+ T I+ +C G AA +++ + G Y ++ + G+
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ +EEM++ D+ Y +IN C G+L + E G P+ + YS L
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241
Query: 547 YNKLLASNKVERAYKLFLKIK 567
+ +++A K ++ ++
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMR 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 4/177 (2%)
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
N C P + L S I + +A++ +M + P T + + G
Sbjct: 54 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 113
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
+K AG + ++ Y +++ + + G ++EEM+ G D Y +I+
Sbjct: 114 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 173
Query: 514 GLCNIGQLENAVLVMEESLHKGFC--PSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
G +G+L++ V EE K C P + Y+ L N K+ + + ++K
Sbjct: 174 GFGKVGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 162/370 (43%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ ++N+++ L K +D LK+ ++ +L T S + GL A V KA +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
+E D + N +L C+ ++ + + ++ K N+ +YN +I G + G
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENG 373
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
++ + I M G+ D +T+ + GL G + AL + + L+ Y
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
++I L+EA + + + + + LI I+ ++ +A L EM
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G P+ + I LC G A K + G K L Y +LL L R K +
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
L +W + +SG +D+ ++ +I+GLC++G+L++A+ VM H+ + + Y+ L
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 550 LLASNKVERA 559
RA
Sbjct: 614 FFKVGDSNRA 623
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 182/403 (45%), Gaps = 10/403 (2%)
Query: 173 AMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIV 232
A F+ A + P Y+ ILR L + + ++ + +++ +R++ + + V
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV 84
Query: 233 ADGLVRAQRVYKAIQIFGNTEEFGFGCD--TESLNVLLQCLCKRSH---VRAANSYFNAV 287
+ +A+ +F E FGC+ S N LL + V + +YF
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREI-FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
G P N+ TYN +I K + + + L+ M ++GF PD ++ +++ L +AG+++
Sbjct: 144 -GVAP-NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY-RCLLSNNCDPDIDTYTKL 406
DAL++FD + E+ + + YN +I F+ D A++ + R L ++ P++ T+ +
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
IS K +V D L++ + M T +S I LC G A ++ +
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
I + Y +L R GK L +W M+ S ++ Y +I GL G+++ A +
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATM 380
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+ KG+ + Y + L + V +A + +++++
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 182/375 (48%), Gaps = 3/375 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKML-RDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
+ D+ YN+++ K+K +++ R L + N++T +I+ GL + RV
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAG 304
++I+ ++ D + + L+ LC +V A S FN + + K +V TYNT++ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + G++ + ++ M E + + +++ L++GL G+I++A I+ + K Y +
Sbjct: 335 FCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ Y I G +++A+ + + S+ D+ Y +I K +++ +A ++
Sbjct: 394 KTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM G+ ++ + I L A + K GC+ ++ +Y +L+ L + G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
K G +EM E+G+ D++ Y ++ GLC +++ A+ + + L G ++++
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 545 KLYNKLLASNKVERA 559
L + L + K++ A
Sbjct: 574 ILIHGLCSVGKLDDA 588
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 4/359 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +YN +L + I L++ R + + +VN+ + +I+ GL+ ++ +A I+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKI-PFNVATYNTIIAGWSKI 308
G+ D + + + LC +V A V+ +V Y +II K
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV- 367
++ + +++ M + G + ++L+ GL R R+ +A F + K+ T V
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVS 501
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN +I G EA + + +L N PD+ TY+ L+ + RK+ ALE+ + L
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ I LCS G AM + C +L Y L+ + G
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
IW M + G D+ Y I+ GLC + A+ +++ + G P+ ++ L
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 36/334 (10%)
Query: 180 WAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRA 239
W I + +I SYN++++ L + ID + R + +G + T I GL
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 240 QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA--------------NSYF- 284
V KA+ + E G D + ++ CLCK+ + A NS+
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 285 NAVKGKIPFN---------------------VATYNTIIAGWSKIGQVCQMKKILEAMVE 323
NA+ G + + V +YN +I G K G+ + ++ M+E
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
+G+ PD T+ LL GL R +I+ AL+++ ++ + ++N +I SVG LD+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A+ + NC ++ TY L+ F K A + M G+ P + + ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
LC AM + AR G ++ + +L+
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 165/368 (44%), Gaps = 1/368 (0%)
Query: 197 ILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG 256
++ L K+ I+ L +++ + G++ NL + + D L + ++ ++A +F + G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKIGQVCQMK 315
+ + ++L+ C+R + A S+ V + +V YN++I G K G + +
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
+ M+ P T+ SL+ G G+I AL+++ + K + ++S
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
G + +A+K + + N P+ TY +I + + ++ A E L EM +GIVP T
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
+ I LC G A + K C+++ Y LL R GK L++ +E
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M + G D+ Y +I+G + +++E +G P +IY+ + + +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 556 VERAYKLF 563
+ A+ ++
Sbjct: 698 FKEAFGIW 705
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 176/413 (42%), Gaps = 44/413 (10%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D++ Y ++R+L + K + +M+ + G VN+ +++ DGL + Q+V++A+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 247 QI----------------------FGNTEEFGFGCDT-------------ESLNVLLQCL 271
I +EF G + +++ L++ L
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 272 CKRSHVRAANSYFNAVKGKIPFNVA----TYNTIIAGWSKIGQVCQMKKILEAMVEDGFT 327
KR + A N VK + F V+ YN +I K + + + + + M + G
Sbjct: 343 RKRGKIEEA---LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
P+ T+ L+ R G+++ AL +V+ L YN++I+ GD+ A +
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+++ +P + TYT L+ + K+ AL + EM G+GI PS T T+ + L
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A+ ++ + K + Y +++ G +EM E G D
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCP-SRLIYSKLYNKLLASNKVERA 559
Y +I+GLC GQ A V + LHKG C + + Y+ L + K+E A
Sbjct: 580 YRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 1/339 (0%)
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
+ TLS + GLV+ + A+++F + G D +++ LC+ + A
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
++ N+ YN +I G K +V + I + + PD T+ +L+ GL +
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
E L++ D ++ + + ++++ G ++EA+ + ++ P++ Y
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYN 371
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
LI + K RK +A + D M G+ P+ T + I+ C G A+
Sbjct: 372 ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G K+S+ Y L+ +FG EM + Y ++ G C+ G++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ + E KG PS ++ L + L + + A KLF
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 166/407 (40%), Gaps = 38/407 (9%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ K I+ L++ ++ +GI ++ T + + GL RA + A+++F
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
E+ + + NV+++ C+ + A + + KG +P + +Y +I G GQ
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP-DTYSYRPLIHGLCLTGQ 592
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ K ++ + + + + LL G R G++E+AL + +V++ L+ Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I + D + + PD YT +I A K +A + D M+ +G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA---------GCKISL----------- 470
VP+ T T+ I LC G + A ++ + + GC + +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 471 ---------------SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
+ Y +L+ R G+ + M G S D Y +IN L
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
C ++ A+ + KG P R+ Y+ L + + ++ +A +L
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 168/415 (40%), Gaps = 48/415 (11%)
Query: 191 IHSYNVILRALGKKKFID------FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYK 244
++ YN ++ G KF D FM +M+ + + + T + + G ++ K
Sbjct: 437 VYPYNSLIN--GHCKFGDISAAEGFMAEMI----NKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIA 303
A++++ G + LL L + +R A FN + + + N TYN +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G+ + G + + + L+ M E G PD ++ L+ GL G+ +A D L + + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
Y ++ F G L+EA+ + ++ D D+ Y LI +K + +L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 424 DEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
EM +G+ P TS I+ G A I+ GC + Y ++ L +
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 484 G----------------------KCGMLLNIWE----EMQES---------GYSSDMEVY 508
G G L+I +MQ++ G ++ Y
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+I G C G++E A ++ + G P + Y+ + N+L N V++A +L+
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKL 406
D + + EK + +S ++ +I +++ + + + ++ +++ + P++ T + L
Sbjct: 139 DVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSAL 198
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ +K R A+E+ ++M+ GI P T I LC A + GC
Sbjct: 199 LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+++ Y +L+ L + K + I +++ D+ Y ++ GLC + + E +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+M+E L F PS S L L K+E A L ++
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 8/271 (2%)
Query: 137 KLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNV 196
KL ++ + GVDL L V L G+L + +FF + + M + + +V
Sbjct: 627 KLEEALSVCQEMVQRGVDLDL-VCYGVLIDGSLKHKDRKLFF--GLLKEMHDRGLKPDDV 683
Query: 197 ILRAL--GKKKFIDFMLKM-LRDLR-TEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
I ++ K K DF + DL EG N T + V +GL +A V +A +
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 253 EEFGFGCDTESLNVLLQCLCK-RSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQV 311
+ + + L L K ++ A NA+ + N ATYN +I G+ + G++
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ +++ M+ DG +PDC T+ +++ L R ++ A+++++++ EK + YN +
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
I G++ +A + +L P+ T
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 9/264 (3%)
Query: 181 AIKQPMIPK----DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
++ Q M+ + D+ Y V++ K K +L+++ G+ + + + D
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFN 294
+ +A I+ G + + ++ LCK V A + ++ +P N
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP-N 751
Query: 295 VATYNTIIAGWSKIGQVCQMKKI-LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
TY + +K G+V K + L + G + +T++ L++G R GRIE+A ++
Sbjct: 752 QVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
++ + Y MI+ D+ +AI+ + + PD Y LI A
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 414 RKVADALEMLDEMLGQGIVPSTGT 437
++ A E+ +EML QG++P+ T
Sbjct: 871 GEMGKATELRNEMLRQGLIPNNKT 894
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 173/378 (45%), Gaps = 2/378 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I ++ SYN ++ ++K +D + ++ +G+ N T SI+ DG R A+
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGK-IPFNVATYNTIIAG 304
++ + + ++ LCK A N ++ K + + +YN+II G
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K G++ E M +G +P+ T+ SL+ GL + R++ AL++ D + K L+
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y A+I F +++ A + LL +P Y LIS F + AL++
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+ML G+ GT T+ I+ L G A +Y + G Y +++ LS+ G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+ ++ ++EEM+++ + ++ +Y +I G G L+ A + +E L KG P +
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 545 KLYNKLLASNKVERAYKL 562
L + + + + RA L
Sbjct: 834 ILVSGQVGNLQPVRAASL 851
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 200/484 (41%), Gaps = 78/484 (16%)
Query: 155 LSLDVVAKT-LYRGNLGGEAMV---IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFM 210
+S++VVA T L G+ +V + F+ K+ P + +++V++ K ++
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSV-TFSVLIEWFRKNGEMEKA 393
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
L+ + + G+T ++ + + G ++ Q+ +A+++F + E G + N +L
Sbjct: 394 LEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSW 452
Query: 271 LCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD 329
LCK+ A + ++ + I NV +YN ++ G + + + + ++E G P+
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 330 CSTF-----------------------------------DSLLQGLGRAGRIEDALKIFD 354
T+ +++ GL + G+ A ++
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 355 NLVE-KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
N++E K + YN++I F G++D A+ Y + N P++ TYT L++ K
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 414 RKVADALEMLDEM-----------------------------------LGQGIVPSTGTV 438
++ ALEM DEM L +G+ PS
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
S I + G AA+ +YK+ K G + L Y L+ L + G + ++ EMQ
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
G D +Y I+NGL GQ V + EE P+ LIY+ + ++
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDE 812
Query: 559 AYKL 562
A++L
Sbjct: 813 AFRL 816
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 165/413 (39%), Gaps = 74/413 (17%)
Query: 228 TLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV 287
T ++ +R ++ +A+++ E G D+ ++ +Q CK + ANS +
Sbjct: 235 TTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREM 294
Query: 288 KGK---IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
K K +P + TY ++I K G + ++ + M+ DG + + SL+ G +
Sbjct: 295 KEKKLCVP-SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+ AL +FD + ++ + ++ +I F G++++A+++Y+ + P +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 405 KLISAFIKARKVADALEMLDE----------------------------------MLGQG 430
+I ++K +K +AL++ DE M +G
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
I P+ + + + C A +++ + G K + Y +L+ R L
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQ------------------------------ 520
+ M S + VY+ IINGLC +GQ
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 521 ------LENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+++AV EE G P+ + Y+ L N L +N++++A ++ ++K
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 5/325 (1%)
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAG 304
++ + + FGF ++ + N LL K A N + IPF N ++
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF-FPYVNRTLSA 207
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + + K++ MV G D T L++ R + +AL++ +E+ +
Sbjct: 208 LVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPD 267
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNN-CDPDIDTYTKLISAFIKARKVADALEML 423
+ +Y+ + DL A R + C P +TYT +I A +K + DA+ +
Sbjct: 268 SLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLK 327
Query: 424 DEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
DEML GI + TS I C +A++++ + K G + + +L+ +
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 484 GKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIY 543
G+ L +++M+ G + + II G + E A+ + +ES G + +
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVC 446
Query: 544 SKLYNKLLASNKVERAYKLFLKIKA 568
+ + + L K + A +L K+++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMES 471
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 16/358 (4%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPF 293
LV+++R+ A +++ + G D S +L++ +C V GK IP
Sbjct: 180 LVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP- 238
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N+ YNTII G+ K+G + + + + GF P TF +++ G + G + ++
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 354 DNLVEKDYVLETSVYNAMISNFISVG---DLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+ E+ + N +I G D E+I + +++N+C PD+ TY LI+
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW---IIANDCKPDVATYNILINRL 355
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
K K A+ LDE +G++P+ + I+ C A + + + GCK +
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
Y +L+ L G +N+ ++ + G S D +Y +++GLC G+ A L+ E
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF-------LKIKAARSNENARRFWRA 581
L + P +Y+ L + + S + A K+F +K+ N + F R+
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 171/391 (43%), Gaps = 17/391 (4%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
E V F + A K+ +IP ++ SY +++A K K D K+L + G ++ T I
Sbjct: 362 EVAVGFLDEASKKGLIPNNL-SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK- 290
+ GLV + + A+ + + G D N+L+ LCK A F+ + +
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
I + Y T+I G+ + G + +K+ VE G D +++++G R+G +++AL
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+ + E+ V + Y+ +I ++ D+ AIK +R + N C P++ TYT LI+ F
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP-HAAMMIYKRARKAGCKIS 469
A E EM + +VP+ T T+ I L A+ ++ C +
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 470 LSAYKLLLMRL--------------SRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
+ LL S G+ + + M+ G+S Y + L
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
C G ++ A + ++ + KGF P + ++ +
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 172/424 (40%), Gaps = 25/424 (5%)
Query: 160 VAKTLYRGNLGGEAM--VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFI---------- 207
V + L G G + ++F+N I DI + ++ + L K F+
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 208 -------DFML--KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFG 258
DF+ ++L +++ G+ V++ L+ + D R + G
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 259 CDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKK 316
D + N+L+ LCK A + + KG IP N+ +Y +I + K + K
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL-SYAPLIQAYCKSKEYDIASK 401
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
+L M E G PD T+ L+ GL +G ++DA+ + L+++ + ++YN ++S
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 377 SVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
G A + +L N PD Y LI FI++ +A ++ + +G+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 437 TVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
+ I+ C G A+ R + Y ++ + + I+ M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA-SNK 555
+++ ++ Y +ING C G + A +E + P+ + Y+ L L S+
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 556 VERA 559
+E+A
Sbjct: 642 LEKA 645
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 152/387 (39%), Gaps = 1/387 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D +S ++++ + + ++ K++ +G N+ + + G + + A +F
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKI 308
+ GF E+ ++ CK A++ + VK + + +V N II +
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + + ++ + PD +T++ L+ L + G+ E A+ D +K + Y
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+I + + D A K + C PDI TY LI + + + DA+ M +++
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G+ P + LC G A +++ Y L+ R G
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
++ E G D+ + +I G C G L+ A+ M + P + YS + +
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 549 KLLASNKVERAYKLFLKIKAARSNENA 575
+ + A K+F ++ + N
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNV 590
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 4/325 (1%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
++ T +I+ + L + + A+ + G + S L+Q CK A+
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 285 --NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
A +G P ++ TY +I G G + + +++ G +PD + ++ L+ GL +
Sbjct: 404 LQMAERGCKP-DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
GR A +F +++++ + + VY +I FI GD DEA K + + D+
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
+ +I F ++ + +AL ++ M + +VP T ++ I+ A+ I++
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN-IGQL 521
K CK ++ Y L+ G M ++EMQ ++ Y +I L L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 522 ENAVLVMEESLHKGFCPSRLIYSKL 546
E AV E + P+ + ++ L
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCL 667
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 150/383 (39%), Gaps = 4/383 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP +I YN I+ K I+ + ++L+ +G LET + +G + +
Sbjct: 237 IP-NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSH-VRAANSYFNAVKGKIPFNVATYNTIIAGW 305
++ +E G LN ++ + + V A S + +VATYN +I
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K G+ L+ + G P+ ++ L+Q ++ + A K+ + E+ +
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
Y +I + G +D+A+ L+ PD Y L+S K + A + E
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
ML + I+P + I+ G A ++ + + G K+ + + ++ R G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC-PSRLIYS 544
L M E D Y II+G + A+ + + K C P+ + Y+
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF-RYMEKNKCKPNVVTYT 594
Query: 545 KLYNKLLASNKVERAYKLFLKIK 567
L N + A + F +++
Sbjct: 595 SLINGFCCQGDFKMAEETFKEMQ 617
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 7/270 (2%)
Query: 301 IIAGWSKIGQVCQMKKILEAMVE--DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
++ +++ G + + +I + +VE D PD +SLL L ++ R+ DA K++D + +
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDS-VPDVIACNSLLSLLVKSRRLGDARKVYDEMCD 198
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+ ++ ++ + G ++ K C P+I Y +I + K + +
Sbjct: 199 RGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN 258
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM 478
A + E+ +G +P+ T + I C G A+ + ++ G ++S+ ++
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 479 RLSRFG-KCGMLLNI-WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
R G K +I W + + D+ Y +IN LC G+ E AV ++E+ KG
Sbjct: 319 AKYRHGYKVDPAESIGW--IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGL 376
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
P+ L Y+ L S + + A KL L++
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
+GF CS+F LL IED L NL ++ L + ++ + G L +
Sbjct: 98 NGFA--CSSFLKLLARYRIFNEIEDVL---GNLRNENVKLTHEALSHVLHAYAESGSLSK 152
Query: 384 AIKYYRCLLS-NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
A++ Y ++ + PD+ L+S +K+R++ DA ++ DEM +G + +
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
+ +C+ G + + GC ++ Y ++ + G +++E++ G+
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+E + +ING C G + ++ E +G
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 178/413 (43%), Gaps = 36/413 (8%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ +YN ++ ++ M ++LR + G++ N+ T + + G + + +A +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVR-AANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
+E D VL+ C+ +R A + N ++ + N N++I G+ K
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
GQ+ + ++I M + PD T+++L+ G RAG +++ALK+ D + +K+ V Y
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N ++ + +G + + ++ +L + D + + L+ A K +A+++ + +L
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+G++ T T+ I LC + A I CK ++ Y+ L + G
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 489 LLNIWEEMQESGYSSDMEVYEYIIN----------------------------------- 513
+ E M+ G +E+Y +I+
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
G CNIG ++ A E + KG + I SK+ N L +K++ A L KI
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 164/373 (43%), Gaps = 37/373 (9%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+++IL+ +K + L + ++ G +L + + + LVR + A+ ++
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKI--PFNVATYNTIIAGWSKIGQV 311
F D + ++++ C+ +V A + + + NV TYN++I G++ IG V
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQ--------------------------------- 338
M ++L M E G + + T+ SL++
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 339 --GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC 396
G R G+I DA+++ DN++E T++ N++I+ + G L EA + + + +
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
PD TY L+ + +A V +AL++ D+M + +VP+ T ++ G H +
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
++K K G + LL L + G + +WE + G +D +I+GLC
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 517 NIGQLENAVLVME 529
+ ++ A +++
Sbjct: 518 KMEKVNEAKEILD 530
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/384 (18%), Positives = 166/384 (43%), Gaps = 2/384 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTE-GITVNLETLSIVADGLVRAQRVYKA 245
+ D+ + ++++ A + +D + ++ + G+ +N+ T + + +G V
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAG 304
++ E G + + L++ CK+ + A F +K K+ + Y ++ G
Sbjct: 281 TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + GQ+ ++ + M+E G + + +SL+ G ++G++ +A +IF + + +
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YN ++ + G +DEA+K + P + TY L+ + + D L +
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
ML +G+ + ++ +E L G + AM +++ G +++ L +
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
K I + + ++ Y+ + +G +G L+ A V E KG P+ +Y+
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 545 KLYNKLLASNKVERAYKLFLKIKA 568
L + + + L ++++A
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRA 604
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 9/220 (4%)
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDT-ESLNVLLQC---LCKRS 275
+GIT+N+ S +A+ L R ++ +A + +F +SL L+ C ++
Sbjct: 640 KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Query: 276 HVRAANSYFNAVKGK--IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE-DGFTPDCST 332
+ A S N+ K +P N+ YN IAG K G++ +K+ ++ D F PD T
Sbjct: 700 Q-KIAESVENSTPKKLLVPNNI-VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ L+ G AG I A + D + K + YNA+I +G++D A + L
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
P+ TY LI +K+ VA+A+ + ++M+ +G+V
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 168/383 (43%), Gaps = 21/383 (5%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
S + +L AL K + +K+ ++ G+ + TL+++ GL + ++V +A +I N
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSY--FNAVKGKIPFNVATYNTIIAGWSKIGQ 310
F ++ L K +++ A + + KG P + YNT+I+G K
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP-TIEMYNTLISGAFKYRH 591
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ ++ ++ + G TP +T+ +L+ G G I+ A ++EK L ++ +
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 371 MISNFISVGDLDEAIKYYRCLLSN---NCDPDIDTYTKL-------ISAFIKARKVADAL 420
+ ++ + +DEA CLL + D + Y L + +K +K+A+++
Sbjct: 652 IANSLFRLDKIDEA-----CLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS-AYKLLLMR 479
E + + +VP+ I LC G A ++ + I Y +L+
Sbjct: 707 E--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
+ G + +EM G ++ Y +I GLC +G ++ A ++ + KG P+
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 540 RLIYSKLYNKLLASNKVERAYKL 562
+ Y+ L + L+ S V A +L
Sbjct: 825 AITYNTLIDGLVKSGNVAEAMRL 847
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 163/423 (38%), Gaps = 77/423 (18%)
Query: 154 DLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKM 213
++S + + L++ EAM ++ N + + D + NV++ L K + ++ ++
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLL--TDTITLNVMISGLCKMEKVNEAKEI 528
Query: 214 LRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK 273
L ++ ++T ++ G + + +A + E G E N L+ K
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 274 RSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
H+ ++ + + VATY +I GW IG + + M+E G T + +
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVL----------ETS---------------- 366
+ L R +I++A + +V+ D +L E S
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708
Query: 367 ------------VYNAMISNFISVGDLDEAIKYYRCLLSNN-CDPDIDTYTKLISAFIKA 413
VYN I+ G L++A K + LLS++ PD TYT LI A
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIA 768
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A + DEM +GI+P+ T + I+ LC G RA++
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN-------VDRAQR---------- 811
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+ ++ + G + + Y +I+GL G + A+ + E+ +
Sbjct: 812 ------------------LLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Query: 534 KGF 536
KG
Sbjct: 854 KGL 856
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 129/296 (43%), Gaps = 12/296 (4%)
Query: 272 CKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
CK H+ + + K + VA ++ W ++ +V + E F+P +
Sbjct: 108 CKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFK---------EFSFSP--T 156
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
FD +L+ G +++AL +FDN+ + N+++SN + G+ A+ Y +
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ-GIVPSTGTVTSFIEPLCSFGP 450
+S PD+ T + +++A+ ++ V A+ E G+ + T S I G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
+ + + G ++ Y L+ + G +++E ++E +D +Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+++G C GQ+ +AV V + + G + I + L N S ++ A ++F ++
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 2/382 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +++++N+++ L K+ + L + GI + T + + G R+ A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
I + GF D ++ N +L +C + G +P +V+ YN +I G S
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI-GLVPDSVS-YNILIRGCS 338
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
G + + MV+ G P T+++L+ GL +IE A + + EK VL++
Sbjct: 339 NNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 398
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN +I+ + GD +A + ++++ P TYT LI + K +A E+ +++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
+G+G+ P + + ++ C+ G A + K Y L+ L GK
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ EM+ G D Y +I+G G ++A +V +E L GF P+ L Y+ L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 547 YNKLLASNKVERAYKLFLKIKA 568
L + + E A +L ++K+
Sbjct: 579 LKGLSKNQEGELAEELLREMKS 600
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 164/376 (43%), Gaps = 6/376 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+++++R + + +D ++ ++ +G ET + + L R R+ A + +
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQV 311
+ + N+++ LCK ++ A + ++ G P + TYNT++ G+S G++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP-TIVTYNTLVQGFSLRGRI 276
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ I+ M GF PD T++ +L + GR + L+ + E V ++ YN +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNIL 333
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I + GDL+ A Y ++ P TY LI K+ A ++ E+ +GI
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
V + T I C G A ++ G + + Y L+ L R K
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
++E++ G D+ + +++G C IG ++ A +++E P + Y+ L L
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 552 ASNKVERAYKLFLKIK 567
K E A +L ++K
Sbjct: 514 GEGKFEEARELMGEMK 529
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 9/344 (2%)
Query: 226 LETLS-IVADGLVRA----QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
LET S I+ D LVR + V +AI+ F +E GF TE+ N +L L + + + A
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 281 NSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
++ + + +I NV T+N +I K G++ + K L M G P T+++L+QG
Sbjct: 210 WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
GRIE A I + K + + YN ++S + G E ++ + + PD
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPD 326
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+Y LI + A DEM+ QG+VP+ T + I L AA ++ +
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
R+ G + Y +L+ + G + +EM G Y +I LC
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ A + E+ + KG P ++ + L + A ++RA+ L
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 149/354 (42%), Gaps = 7/354 (1%)
Query: 166 RGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
RG + G ++I +K D+ +YN IL + + ++LR+++ G+ +
Sbjct: 273 RGRIEGARLII---SEMKSKGFQPDMQTYNPILSWMCNEGRAS---EVLREMKEIGLVPD 326
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
+ +I+ G + A + G + N L+ L + + AA
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
++ K I + TYN +I G+ + G + + + M+ DG P T+ SL+ L R
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+ +A ++F+ +V K + + N ++ ++G++D A + + + +PD TY
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
L+ K +A E++ EM +GI P + + I G A M+
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
G +L Y LL LS+ + + + EM+ G + + +I + N+
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 4/384 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K I + ++N +L+ L K ++ +L++++ G + T SI+ DG ++
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF--NAVKGKIPFNVATYN 299
A+ ++ + G + + ++LL LCK + A KG +P N YN
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP-NEVIYN 393
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+I G+ + G + + +EAM + G PD ++ L++ G +E+A K + + K
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
YN +I + + D+ + + N P++ +Y LI+ K K+ +A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+ +M +G+ P I+ CS G A K K G +++L Y L+
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
LS GK ++ E+ G D+ Y +I+G G ++ + + EE G P+
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 540 RLIYSKLYNKLLASNKVERAYKLF 563
Y L + L +E +LF
Sbjct: 634 LKTYHLLIS-LCTKEGIELTERLF 656
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 190/462 (41%), Gaps = 80/462 (17%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+F +++ P + D SY ++ L + K I + LR EGI + ++L+++ D
Sbjct: 95 LFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDH 153
Query: 236 LVRAQRVYKAIQIFGNTEE-------FGFGCDTES------------------------- 263
LV+ ++ I +F N E F +G ++
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS 213
Query: 264 ---LNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYNTIIAGWSKIGQVCQMKKIL 318
NVL+ LCK + A F+ + + +P ++ TYNT+I G+ K G + K+
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP-SLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 319 EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
E M D P TF++LL+GL +AG +EDA + + + +V + ++ + + S
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 379 GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
+ A+ Y + + + T + L++A K K+ A E+L + +G+VP+
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG-------------- 484
+ I+ C G A M + K G K AY L+ R G
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 485 ------------------------KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQ 520
KC +I +EM+++G ++ Y +IN LC +
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKC---FDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 521 LENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
L A +V + +G P IY+ L + + K+E A++
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 160/373 (42%), Gaps = 10/373 (2%)
Query: 166 RGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
+G+L G M I KQ M P D +YN ++R + ++ K + ++ +G++ +
Sbjct: 402 KGDLVGARMKI--EAMEKQGMKP-DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
+ET +I+ G R K I E+ G + S L+ CLCK S + A
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
++ + + V YN +I G G++ + + M++ G + T+++L+ GL G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
++ +A + + K + YN++IS + G++ I Y + + P + TY
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 405 KLISAFIKARKVADALEMLDEMLGQ-GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
LIS K + +E+ + + G+ + P + G A + K+ +
Sbjct: 639 LLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 464 AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
+ + Y L++ + GK + ++ +EM + + Y I+ G C + +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 524 AVLVMEESLHKGF 536
A + E KGF
Sbjct: 754 AYVWYREMQEKGF 766
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
PK + YN+++ K I+ + +++ +GI +NL T + + DGL ++ +A
Sbjct: 527 PK-VRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWS 306
+ G D + N L+ +V+ + + +K I + TY+ +I+ +
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
K G + +++ M PD ++ +L G +E A + ++EK L+ +
Sbjct: 646 KEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN++I + VG L E + + +P+ DTY ++ + + A EM
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761
Query: 427 LGQGIV 432
+G +
Sbjct: 762 QEKGFL 767
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 109 QSNKLEESKVVA----DLFLLPEEKLRGVFLQKLNGKSAIESA------LANTGVDLSLD 158
+ +KL E+++V D + P+ ++ + + K IE A + G++L+L
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL- 564
Query: 159 VVAKTLYRG-NLGG---EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML 214
V TL G ++ G EA + I + + D+ +YN ++ G + + +
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLE--ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
+++ GI L+T ++ L + + ++FG E D N +L C
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVH 678
Query: 275 SHV-RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
+ +A N ++ I + TYN++I G K+G++C+++ +++ M P+ T+
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
+ +++G A + + EK ++L+ + N ++S
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 179/421 (42%), Gaps = 42/421 (9%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F+ K+ + SY++++ L + ++ + + +G + T +++ L
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVA 296
+ KA +F G + + VL+ LC+ + AN VK +I +V
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TYN +I G+ K G+V ++L M + P+ TF+ L++GL R G+ A+ + +
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC---DPDIDTYTKLISAFIKA 413
++ + YN +I G ++ A Y+ L S NC +PD T+T +I+AF K
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTA---YKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA--------- 464
K A L ML +GI T T+ I+ +C G A+ I + K
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 465 ---------GCKI-----------------SLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
GCK+ S+ Y L+ L R G I E M+
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
SG ++ Y IINGLC G++E A ++ G P+ + Y+ + + + K++R
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 559 A 559
A
Sbjct: 670 A 670
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 173/400 (43%), Gaps = 36/400 (9%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
+Y V+++AL + ID + ++ G N+ T +++ DGL R ++ +A +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQ 310
+ + N L+ CK V A + K NV T+N ++ G ++G+
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ +L+ M+++G +PD +++ L+ GL R G + A K+ ++ D + + A
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE----- 425
+I+ F G D A + +L D T T LI K K DAL +L+
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 426 --------------------------MLGQ----GIVPSTGTVTSFIEPLCSFGPPHAAM 455
MLG+ G+VPS T T+ ++ L G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
I + + +GC ++ Y +++ L +FG+ + MQ+SG S + Y ++ G
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
N G+L+ A+ + + +G+ + IYS L + S K
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 2/345 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y+ +L +L K R + +G V + + + L + A
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQV 311
+ GF D+ LL C+ ++R A F+ + ++ N +Y+ +I G ++G++
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ + + M E G P T+ L++ L G I+ A +FD ++ + Y +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I G ++EA R ++ + P + TY LI+ + K +V A E+L M +
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P+ T +E LC G P+ A+ + KR G + +Y +L+ L R G
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ M D + IIN C G+ + A + L KG
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 146/342 (42%), Gaps = 4/342 (1%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G +N S + L + + A + E GF ++ LCK + AA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 281 NSYFNAVKGKIPFNVATY--NTIIAGWSKIGQVCQMKKILEAMVED-GFTPDCSTFDSLL 337
+ + + KI F + ++ +++ G+ + + K+ + M ++ P+ ++ L+
Sbjct: 215 EMFMSKIL-KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
GL GR+E+A + D + EK T Y +I G +D+A + ++ C
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
P++ TYT LI + K+ +A + +M+ I PS T + I C G A +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
K CK ++ + L+ L R GK +++ + M ++G S D+ Y +I+GLC
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G + A ++ P L ++ + N K + A
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
Y TI+ K G + + +++ GF D SLL G R + DALK+FD +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 358 EKDYVLETSV-YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
++ SV Y+ +I VG L+EA + C P TYT LI A +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A + DEM+ +G P+ T T I+ LC G A + ++ K S+ Y L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ + G+ + M++ ++ + ++ GLC +G+ AV +++ L G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLF 563
P + Y+ L + L + AYKL
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 161/382 (42%), Gaps = 21/382 (5%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D ++ I+ A K+ D L + +GI+++ T + + DG+ + + A+
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAG 304
I + SLNV+L L K V+ + + G +P +V TY T++ G
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP-SVVTYTTLVDG 590
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ G + +ILE M G P+ + ++ GL + GR+E+A K+ + +
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y M+ +++ G LD A++ R ++ + + Y+ L+ F+ ++K
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK--------- 701
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
GI S + S I L P +I + GC L + L+ RL + G
Sbjct: 702 -----GIDNSEESTVSDI-ALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEG 753
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+ ++ + + E G + + + I+ C+ + + ++ L GF PS +
Sbjct: 754 RTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFC 812
Query: 545 KLYNKLLASNKVERAYKLFLKI 566
+ L ERA +L +++
Sbjct: 813 LVIQGLKKEGDAERARELVMEL 834
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
Query: 404 TKLISAFIKARKVADALEMLDEMLGQ-GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
T L+ F + + DAL++ D M + P++ + + I LC G A + +
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
+ GC+ S Y +L+ L G N+++EM G ++ Y +I+GLC G++E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 523 NAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
A V + + PS + Y+ L N +V A++L ++ N R F
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 5/387 (1%)
Query: 184 QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY 243
Q + P I + N +L + I++ + ++ G+ + + ++ G R ++
Sbjct: 777 QGLTPSSI-TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 835
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTI 301
+A + + GF D + ++L LC+ V A YF + G P N+ + ++
Sbjct: 836 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP-NLINFTSL 894
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD- 360
I G K G + Q ++LE MV +G+ P+ T +L+ GL + G E A ++F LV D
Sbjct: 895 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 954
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
Y Y +MI + L+ A + + P+++TYT LI+ KA A
Sbjct: 955 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 1014
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL 480
E+++ M +G +P+ T + I+ LC A + +A G + Y +L+
Sbjct: 1015 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 1074
Query: 481 SRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSR 540
+ L + M ++G+ +DM + +I C +++ + + + + G P++
Sbjct: 1075 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 1134
Query: 541 LIYSKLYNKLLASNKVERAYKLFLKIK 567
Y+ + + ++ A K F +K
Sbjct: 1135 ETYTSMISCYCKEGDIDLALKYFHNMK 1161
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 146/339 (43%), Gaps = 2/339 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN- 251
++ ++ L KK I +ML ++ G N+ T + + DGL + KA ++F
Sbjct: 890 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 949
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQ 310
+ + + ++ CK + A F+ +K + F NV TY T+I G K G
Sbjct: 950 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ +++ M ++GF P+ T+++ + L + R +A ++ + + Y
Sbjct: 1010 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 1069
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I D+++A+ ++ + + D+ LI+AF + +K+ ++ + ++ G
Sbjct: 1070 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 1129
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
++P+ T TS I C G A+ + ++ GC Y L+ L +
Sbjct: 1130 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 1189
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
++E M + G S + C NA++++E
Sbjct: 1190 KLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 1228
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 147/360 (40%), Gaps = 39/360 (10%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+ F+ +Q + P ++++Y ++ K +++ + EG N+ T + D
Sbjct: 980 MLFSRMKEQGLFP-NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 1038
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
L + R +A ++ G D + +L+Q CK++ + A ++F
Sbjct: 1039 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF----------- 1087
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
C+M K GF D + L+ R +++++ ++F
Sbjct: 1088 ----------------CRMNKT-------GFEADMRLNNILIAAFCRQKKMKESERLFQL 1124
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+V + Y +MIS + GD+D A+KY+ + + C PD TY LIS K
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 1184
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
V +A ++ + M+ +G+ P T + C AM++ + K K+ + +
Sbjct: 1185 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KLWIRTVRT 1241
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
L+ +L K G+ ++++ E S+D V C+ N V + E + +G
Sbjct: 1242 LVRKLCSEKKVGVAALFFQKLLEKDSSAD-RVTLAAFTTACSESGKNNLVTDLTERISRG 1300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 1/263 (0%)
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
++ +S+IG++ + ++ M G TP T + +L+ G IE A +FD + +
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
V ++S Y M+ G + EA ++ ++ PD T T +++A + V A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL 480
+M+ G P+ TS I+ LC G A + + + G K ++ + L+ L
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 481 SRFGKCGMLLNIWEEMQESG-YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
+ G ++ ++ S Y ++ Y +I G C +L A ++ +G P+
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993
Query: 540 RLIYSKLYNKLLASNKVERAYKL 562
Y+ L N + RAY+L
Sbjct: 994 VNTYTTLINGHCKAGSFGRAYEL 1016
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 50/235 (21%)
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
+Y + ++ G+L +A + RC+L N F + ++ +A+ M+ +M
Sbjct: 730 LYLVTADSLLANGNLQKAHEVMRCMLRN---------------FSEIGRLNEAVGMVMDM 774
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK- 485
QG+ PS+ T+ +E G A ++ G S+YKL+++ R GK
Sbjct: 775 QNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 834
Query: 486 ---------------------CGMLLN-----------IW--EEMQESGYSSDMEVYEYI 511
C ++L IW +M + G+ ++ + +
Sbjct: 835 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 894
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
I+GLC G ++ A ++EE + G+ P+ ++ L + L E+A++LFLK+
Sbjct: 895 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 949
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 172/383 (44%), Gaps = 48/383 (12%)
Query: 196 VILRALGKKKFI---DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
++LR + KF D +++M + E V+ + L + G R R + ++++F
Sbjct: 57 MVLRLVSANKFKAAEDLIVRM----KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVC 312
++F CD Y T++A + Q+
Sbjct: 113 KDFD--CDPSQ--------------------------------KAYVTVLAILVEENQLN 138
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGR-AGRIEDALKIFDNLVEKDYVLETSVYNAM 371
K + M E G P ++ + L++ L R G ++ LKIF + ++ ++ Y +
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
IS G +DEA K + ++ +C P + TYT LI+ ++ V +A+ L+EM +GI
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P+ T +S ++ LC G AM +++ GC+ ++ Y L+ L + K +
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL---IYSKLYN 548
+ + M G D +Y +I+G C I + A ++E + G P+RL I+ K N
Sbjct: 319 LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSN 378
Query: 549 KL---LASNKVERAYKLFLKIKA 568
++ L +N RA+ L+L +++
Sbjct: 379 EVVRGLCANYPSRAFTLYLSMRS 401
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 148/338 (43%), Gaps = 8/338 (2%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAAN--SYFNAVKGKIPF 293
LV ++ A + + N E G SLNVL++ LC+ A + K
Sbjct: 131 LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+ TY T+I+G + G++ + KK+ MVE P T+ SL+ GL + +++A++
Sbjct: 191 DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + K Y++++ G +A++ + +++ C P++ TYT LI+ K
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+K+ +A+E+LD M QG+ P G I C+ A G + +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 474 KLLLMRLSRF--GKCG----MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ + + G C ++ M+ G S ++E E ++ LC G+ + AV +
Sbjct: 371 NIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQL 430
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLK 565
++E + G PS+ + L L V A L+
Sbjct: 431 VDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
+G+ D S+F ++ L A + + A + + ++ V+ + ++ + V +
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
+++ + + +CDP Y +++ ++ ++ A + M G+ P+ ++ I+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 444 PLC-SFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
LC + G A + I+ K GC Y L+ L RFG+ ++ EM E +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
+ Y +INGLC ++ A+ +EE KG P+ YS L + L + +A +L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 563 F 563
F
Sbjct: 285 F 285
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 10/290 (3%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
SL+V+ K L R + +A + F K+ P D ++Y ++ L + ID K+
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP-DSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS 275
++ + + T + + +GL ++ V +A++ + G + + + L+ LCK
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 276 HVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
A F + +G P N+ TY T+I G K ++ + ++L+ M G PD +
Sbjct: 277 RSLQAMELFEMMMARGCRP-NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI--SNFISVGDL----DEAIKY 387
++ G + +A D ++ +N + SN + G A
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTL 395
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
Y + S +++T L+ K + A++++DE++ G +PS GT
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 2/281 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP D ++N + L K + ++ + G+ ++ L+ AQR +
Sbjct: 352 IP-DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+ G S N ++ CLCK + A + ++ + I N+ T+NT ++G+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
S G V ++ +LE ++ GF PD TF ++ L RA I+DA F ++E
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN +I + S GD D ++K + + N PD+ Y I +F K RKV A E+L
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
ML G+ P T ++ I+ L G A ++ + GC
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 163/375 (43%), Gaps = 1/375 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN ++ AL K +D + +R++G + T +I+ G+ + V +AI++ E
Sbjct: 183 YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQME 242
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKIGQVC 312
+ G + + +L+ V A ++ K+ N AT T + G + C
Sbjct: 243 QEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPC 302
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ ++L +E +D++L L ++ + + E+ Y+ ++S +NA +
Sbjct: 303 KAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAM 362
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
S + DL E + + +S P + Y L+ A + A++ ++ L +M G++
Sbjct: 363 SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
S + + I+ LC A M + G +L + L S G + +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
E++ G+ D+ + IIN LC ++++A +E L G P+ + Y+ L +
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542
Query: 553 SNKVERAYKLFLKIK 567
+ +R+ KLF K+K
Sbjct: 543 TGDTDRSVKLFAKMK 557
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 155/416 (37%), Gaps = 75/416 (18%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRA---------- 239
++ +Y +++ +D LK L +R + N T+ G+ R
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 240 ----------QRV-YKAI--------------QIFGNTEEFGFGCDTESLNVLLQCLCKR 274
QRV Y A+ Q E G+ D+ + N + CL K
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKG 368
Query: 275 SHVRAANSYFNAV--KGKIP-FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
+ F+ +G P FN Y ++ + + + L+ M DG
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFN--GYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
++++++ L +A RIE+A + ++ +N +S + GD+ + L
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
L + PD+ T++ +I+ +A+++ DA + EML GI P+ T I CS G
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
++ ++ + M+E+G S D+ Y
Sbjct: 547 DRSVKLFAK-----------------------------------MKENGLSPDLYAYNAT 571
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
I C + +++ A +++ L G P YS L L S + A ++F I+
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIE 627
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 101/256 (39%)
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
+I W ++G + + G P +++++ L ++ ++ A F +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ YN +I G +DEAI+ + + P++ TYT LI F+ A +V +A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
L+ L+ M + + P+ T+ +F+ + PP A + + + Y +L
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
LS ++ E GY D + ++ L L + + + +G P
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 540 RLIYSKLYNKLLASNK 555
Y L LL + +
Sbjct: 390 FNGYLVLVQALLNAQR 405
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 151/316 (47%), Gaps = 5/316 (1%)
Query: 210 MLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQ 269
MLKM++ GI ++ T S + +G + + A+ + G E+ G D +L+
Sbjct: 1 MLKMMK----LGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILID 56
Query: 270 CLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
LCK V A +K + I NV TY+++I G K G++ ++ L M P
Sbjct: 57 TLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINP 116
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
+ TF +L+ + G++ ++ +++ Y+++I +DEAIK
Sbjct: 117 NVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
++S C P++ TY+ L + F K+ +V D +++LD+M +G+ +T + + I+
Sbjct: 177 DLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
G A+ ++ G ++ +Y ++L L G+ L+ +E MQ++ D+ Y
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITY 296
Query: 509 EYIINGLCNIGQLENA 524
+I+G+C ++ A
Sbjct: 297 TIMIHGMCKACMVKEA 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K I ++ +Y+ ++ L K + + L ++ ++ I N+ T S + D + +
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYN 299
+ K ++ + + + + L+ LC + V A + + KG P NV TY+
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP-NVVTYS 192
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+ G+ K +V K+L+ M + G + + ++L++G +AG+I+ AL +F +
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ YN +++ + G++++A+ + + D DI TYT +I KA V +A
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEA 312
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
++ ++ + + P T I L G
Sbjct: 313 YDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 184 QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY 243
Q I ++ +Y+ ++ L +D +KML + ++G T N+ T S +A+G ++ RV
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIA 303
I++ + + G +T S N L++ YF A GKI + +
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIK------------GYFQA--GKIDLALGVF----- 246
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G+ M +G P+ +++ +L GL G +E AL F+++ + L
Sbjct: 247 GY---------------MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA--RKVADAL 420
+ Y MI + EA + L +PD YT +I+ +A R ADAL
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 35/202 (17%)
Query: 397 DPDIDTYTKLISAF-----------------------------------IKARKVADALE 421
+PDI T + L++ F K R V ALE
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+L M +GI P+ T +S I LC G A ++ + L+ +
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ GK + ++++ M + ++ Y +I GLC +++ A+ +++ + KG P+ +
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 542 IYSKLYNKLLASNKVERAYKLF 563
YS L N S++V+ KL
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLL 211
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 144/327 (44%), Gaps = 36/327 (11%)
Query: 256 GFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQVCQM 314
GF + N+L+ CK ++ A F+ + K + V ++NT+I G+ K+G + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
++ M + PD T+ +L+ L + +++ A +FD + ++ + ++ +I
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
G++D + Y+ +LS PDI Y L++ F K + A ++D M+ +G+ P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRAR-------------------------------- 462
T T+ I+ C G A+ I K
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 463 ---KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+AG K Y +++ + G + +EMQ G+ + Y ++NGLC +G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKL 546
Q++NA ++++ L+ G P + Y+ L
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTL 561
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 164/368 (44%), Gaps = 10/368 (2%)
Query: 138 LNGKSAIESALANTGVDLSLDVVAKTLY--RGNLGGEAMVIFFNWAIKQPMIPKDIHSYN 195
+ G +E L V S ++V + + + ++ FF+W+ K +N
Sbjct: 48 VGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFN 107
Query: 196 VILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEF 255
+LR L +KK M +L DLR E ++ +T SIVA+ LV+ + AI IF ++F
Sbjct: 108 YVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKF 167
Query: 256 GFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFN-VATYNTIIAGWSKIGQVCQM 314
D ++ ++ LC R HV+ A + K I N ++ Y +++ GWS V +
Sbjct: 168 SCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEA 227
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGR-------AGRIEDALKIFDNLVEKDYVLETSV 367
+++++ M G TPD F+SLL L +G + +AL I + +
Sbjct: 228 RRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMS 287
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN ++S + E+ + + + CDPD +Y ++ + +++DEM+
Sbjct: 288 YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
+G P I LC + A+ ++++ +++ Y LL+ +L + G
Sbjct: 348 ERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFE 407
Query: 488 MLLNIWEE 495
+WEE
Sbjct: 408 KGRELWEE 415
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 13/266 (4%)
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
M+ +L + ++ D TF + + L + G+ EDA+ IF L + + A+IS
Sbjct: 122 MQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIIS 181
Query: 374 NFISVGDLDEAI---KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
S G + A+ +++ ++S N ++ Y L+ + R V +A ++ +M G
Sbjct: 182 ALCSRGHVKRALGVMHHHKDVISGN---ELSVYRSLLFGWSVQRNVKEARRVIQDMKSAG 238
Query: 431 IVPSTGTVTSFIEPLCS-------FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
I P S + LC G A+ I R + + +Y +LL L R
Sbjct: 239 ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 484 GKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIY 543
+ I E+M+ SG D Y +++ L G+ +++E + +GF P R Y
Sbjct: 299 RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 544 SKLYNKLLASNKVERAYKLFLKIKAA 569
L L +V A +LF K+K +
Sbjct: 359 YDLIGVLCGVERVNFALQLFEKMKRS 384
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 127/319 (39%), Gaps = 17/319 (5%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
+ +VA+TL + +G E I + + P+D + I+ AL + + L ++
Sbjct: 140 TFSIVAETLVK--VGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMH 197
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS 275
+ L + G + V +A ++ + + G D N LL CLC+R+
Sbjct: 198 HHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERN 257
Query: 276 HVR--------AANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT 327
R A N KI +YN +++ + +V + +ILE M G
Sbjct: 258 VNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCD 317
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
PD ++ +++ L GR +I D ++E+ + E Y +I V ++ A++
Sbjct: 318 PDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQL 377
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+ + ++ Y LI K E+ +E L + S S ++P +
Sbjct: 378 FEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCS--ISLLDPSVT 435
Query: 448 --FGP---PHAAMMIYKRA 461
F P A M+ +RA
Sbjct: 436 EVFKPMKMKEEAAMVDRRA 454
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 16/250 (6%)
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL--ETSVYNAMISNFISVGD 380
+DGFT +++ L G ++ AL + + KD + E SVY +++ + +
Sbjct: 171 QDGFT-----VTAIISALCSRGHVKRALGVMHH--HKDVISGNELSVYRSLLFGWSVQRN 223
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK-------ARKVADALEMLDEMLGQGIVP 433
+ EA + + + S PD+ + L++ + + V +AL ++ EM I P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
++ + + L + I ++ +++GC +Y ++ L G+ G I
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
+EM E G+ + + Y +I LC + ++ A+ + E+ +Y L KL
Sbjct: 344 DEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKG 403
Query: 554 NKVERAYKLF 563
E+ +L+
Sbjct: 404 GNFEKGRELW 413
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 1/369 (0%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ K I L++ R ++ EG+ NL+T S++ +G V+ + A +F +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQV 311
+ G D N ++ C ++ RA + K + T+ II G++K G +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ ++ + M G P TF+ L+ GL ++E A++I D + Y +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+ + SVGD +A +Y+ L + D DI TY L+ A K+ ++ AL + EM + I
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
++ I+ G A + ++ +K G K + Y + S+ G
Sbjct: 726 PRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
EEM+ G +++ Y +I G E A+ EE G P + +Y L LL
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLL 845
Query: 552 ASNKVERAY 560
+ + AY
Sbjct: 846 SRASIAEAY 854
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 160/374 (42%), Gaps = 2/374 (0%)
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
++R++ EGI + + DG K + +F +E GF + L+
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 273 KRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
K + A +K + + N+ TY+ +I G+ K+ + E MV++G PD
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
+++++ G ++ A++ + + + T + +I + GD+ +++ + +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
C P + T+ LI+ ++ R++ A+E+LDEM G+ + T T ++ S G
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A + R + G + + Y+ LL + G+ L + +EM + VY +
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARS 571
I+G G + A ++++ +G P Y+ + + + RA + +++A
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Query: 572 NENARRFWR-ANGW 584
N + + GW
Sbjct: 796 KPNIKTYTTLIKGW 809
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 161/378 (42%), Gaps = 7/378 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+ ++++ G++ + + +R GIT + + + + +A+ +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVC 312
E G + +V++ K H AA+ +F+ K N + Y II Q C
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC---QTC 428
Query: 313 QMKK---ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
M++ ++ M E+G + + +++ G + L +F L E + Y
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+I+ + VG + +A++ R + ++ TY+ +I+ F+K + A+A + ++M+ +
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G+ P + I C G A+ K +K + + + ++ ++ G
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
L +++ M+ G + + +INGL Q+E AV +++E G + Y+K+
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 550 LLASNKVERAYKLFLKIK 567
+ +A++ F +++
Sbjct: 669 YASVGDTGKAFEYFTRLQ 686
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 114/286 (39%), Gaps = 35/286 (12%)
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
P + F +++ GR G + A + F+ + + + +Y ++I + D+DEA+
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKA--RKVAD--------------------------- 418
R + + + TY+ ++ F KA + AD
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 419 ------ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
A ++ EM +GI + ++ ++++KR ++ G ++
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y L+ ++ GK L + M+E G +++ Y +ING + NA V E+ +
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+G P ++Y+ + + ++RA + +++ R R F
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 181/409 (44%), Gaps = 41/409 (10%)
Query: 175 VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL-RTEGITVNLETLSIVA 233
+ FF WA K+ D +Y ++R L + + M + ++++ R ++V+ LS +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELV 169
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF 293
L RA+ V KA+ +F + G C S
Sbjct: 170 KALGRAKMVSKALSVFYQAK--GRKCKPTS------------------------------ 197
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT-PDCSTFDSLLQGLGRAGRIEDALKI 352
+TYN++I + GQ ++ ++ M +G PD T+ +L+ + GR + A+++
Sbjct: 198 --STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 353 FDNLVEKDYVLETS--VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
FD + KD ++ + +Y ++ + VG +++A+ + + C P + TYT+LI
Sbjct: 256 FDEM--KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
KA +V +A +ML G+ P + + + L G ++ C ++
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 471 SAYKLLLMRLSRFGKCGMLLNIW-EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+Y ++ L ++ W ++M+ S Y +I+G C ++E A+L++E
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
E KGF P Y L N L + + E A +LF ++K N ++R +
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 2/337 (0%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+++Y +++ LGK +D +D+ +G+T ++ L+ + + L + RV + +F
Sbjct: 303 VYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 251 NTEEFGFGCDTESLNVLLQCLCK-RSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKI 308
+ S N +++ L + ++HV +S+F+ +K + + TY+ +I G+ K
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
+V + +LE M E GF P + + SL+ LG+A R E A ++F L E + + VY
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
MI +F G L EA+ + + + PD+ Y L+S +KA + +A +L +M
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
G + + G P A+ +++ + +G K Y LL + G
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
+ EM++ G+ D Y I++ + N+ ++ V
Sbjct: 603 AARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDV 639
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 188/435 (43%), Gaps = 16/435 (3%)
Query: 143 AIESALANTGVDLS---LDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILR 199
I+ + NT V +S L + K L R + +A+ +F+ A + P +YN ++
Sbjct: 148 TIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ-AKGRKCKPTS-STYNSVIL 205
Query: 200 ALGKKKFIDFMLKMLRDLRTEGITV-NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFG 258
L ++ + + ++ ++ EG + T S + + R AI++F ++
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265
Query: 259 CDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKK 316
+ LL K V A F +K G P V TY +I G K G+V +
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP-TVYTYTELIKGLGKAGRVDEAYG 324
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN-F 375
+ M+ DG TPD ++L+ LG+ GR+E+ +F + YN +I F
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
S + E ++ + +++ P TY+ LI + K +V AL +L+EM +G P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML---LNI 492
S I L AA ++K ++ +S Y ++ + FGKCG L +++
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM---IKHFGKCGKLSEAVDL 501
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
+ EM+ G D+ Y +++G+ G + A ++ + G ++ + N
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 553 SNKVERAYKLFLKIK 567
+ RA ++F IK
Sbjct: 562 TGVPRRAIEMFETIK 576
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y V+++ GK + + + +++ +G ++ + + G+V+A + +A + E
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVC 312
E G D S N++L + R A F +K I + TYNT++ ++ G
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+ +++ M + GF D T+ S+L +G +D + F
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 39/343 (11%)
Query: 134 FLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHS 193
L++ A E AL N G + + L + + A+ FF W +QP D H+
Sbjct: 303 ILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALG-FFYWLKRQPGFKHDGHT 361
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y ++ LG+ K + K+L ++ +G N T + + RA + +A+ +F +
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 254 EFG-----------------------------------FGCDTESLNVLLQCLCKRSHVR 278
E G DT + +V++ CL K H+
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 279 AANSYFNAVKGK--IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
AA+ F + G+ P N+ T+N +IA +K K+ M GF PD T+ +
Sbjct: 482 AAHRLFCEMVGQGCTP-NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 337 LQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC 396
++ LG G +E+A +F + K++V + VY ++ + G++D+A ++Y+ +L
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
P++ T L+S F++ ++++A +L ML G+ PS T T
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 140/321 (43%), Gaps = 11/321 (3%)
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQ 310
FGF D N Q L + + A +F +K + F + TY T++ + Q
Sbjct: 318 HNFGFRMDAYQAN---QVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 374
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
++ K+L+ MV DG P+ T++ L+ GRA +++A+ +F+ + E + Y
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCT 434
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I G LD A+ Y+ + PD TY+ +I+ KA + A + EM+GQG
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML- 489
P+ T I A+ +Y+ + AG + Y +++ L G CG L
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL---GHCGFLE 551
Query: 490 --LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
++ EMQ + D VY +++ G ++ A + L G P+ + L
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Query: 548 NKLLASNKVERAYKLFLKIKA 568
+ L +++ AY L + A
Sbjct: 612 STFLRVHRMSEAYNLLQSMLA 632
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 129/318 (40%), Gaps = 9/318 (2%)
Query: 238 RAQRVYKAIQIFGNTEEF--------GFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VK 288
+A +V K + + N F GF D + ++ L + N + V+
Sbjct: 328 QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR 387
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
N TYN +I + + + + + M E G PD T+ +L+ +AG ++
Sbjct: 388 DGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
A+ ++ + E +T Y+ +I+ G L A + + ++ C P++ T+ +I+
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKI 468
KAR AL++ +M G P T + +E L G A ++ ++
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 469 SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
Y LL+ + G ++ M ++G ++ +++ + ++ A ++
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 529 EESLHKGFCPSRLIYSKL 546
+ L G PS Y+ L
Sbjct: 628 QSMLALGLHPSLQTYTLL 645
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 176/408 (43%), Gaps = 48/408 (11%)
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN-TEEFGFGCDTESLNVLLQCLCKR 274
D+ G+++N++T +++ +G ++ A+ + EF D + N +L+ + K+
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 275 SHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
+ +K G +P N TYN ++ G+ K+G + + +I+E M + PD T
Sbjct: 254 GRLSDLKELLLDMKKNGLVP-NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
++ L+ GL AG + + L++ D + + YN +I +G EA K +
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 393 SNNC------------------------------------DPDIDTYTKLISAFIKARKV 416
++ PDI TY LI A++K +
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+ ALEM+ EM +GI +T T+ + ++ LC A + A K G + Y L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+M R K L +W+EM++ + + + +I GLC+ G+ E A+ +E G
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFWRANGW 584
P ++ + +VE+A++ + NE+ + ++ + +
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFY--------NESIKHSFKPDNY 592
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 165/386 (42%), Gaps = 3/386 (0%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+KQ + D+ +YN+++ L + L+++ +++ + ++ T + + DG
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVATYN 299
+A ++ E G + + N+ L+ LCK A + F ++ TY+
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+I + K+G + +++ M + G + T +++L L + ++++A + ++ ++
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
++++ Y +I F +++A++ + + P + T+ LI K A
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+E DE+ G++P T S I C G A Y + K K +LL
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
L + G LN + + E D Y +I+ C +L+ A ++ E KG P
Sbjct: 601 LCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 540 RLIYSKLYNKLLASNKVERAYKLFLK 565
R Y+ + L+ K+ +L K
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKK 685
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 160/361 (44%), Gaps = 8/361 (2%)
Query: 225 NLETLSIVADGLVR---AQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAAN 281
NL T + + GLVR + + A ++F + + G + ++ NVL+ C + A
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 282 SYFNAVKGKI---PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ 338
+ + P NV TYNTI+ SK G++ +K++L M ++G P+ T+++L+
Sbjct: 225 GMLERMVSEFKVNPDNV-TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
G + G +++A +I + + + + + + YN +I+ + G + E ++ + S P
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
D+ TY LI + +A +++++M G+ + T ++ LC A
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV 403
Query: 459 KR-ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
K G + Y L+ + G L + EM + G + I++ LC
Sbjct: 404 KELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK 463
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARR 577
+L+ A ++ + +GF + Y L KVE+A +++ ++K +
Sbjct: 464 ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVST 523
Query: 578 F 578
F
Sbjct: 524 F 524
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+ N IL AL K++ +D +L G V+ T + G R ++V KA++++
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQ 310
++ + N L+ LC A F+ A G +P + +T+N+II G+ K G+
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP-DDSTFNSIILGYCKEGR 571
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
V + + ++ F PD T + LL GL + G E AL F+ L+E+ V +T YN
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNT 630
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
MIS F L EA + +PD TY IS ++ K+++ E+L + G+
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 199/493 (40%), Gaps = 111/493 (22%)
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
+ ++P D+ SYN ++R + K ++ L++ +++ G + +L T I+ D +A ++
Sbjct: 170 RNSLMP-DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNT 300
+A+ + G D L++ C + + F+ V +G P + TYNT
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYNT 287
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+I G+ K+GQ+ + +I E M+E G P+ T+ L+ GL G+ ++AL++ + ++EKD
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 361 -------YVL----------------------------ETSVYNAMISNFISVGDLDEAI 385
Y + + YN ++ + GDLDEA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 386 KYYRCLL--SNNCDPDIDTYTKLISAFIKARKVADALEMLD---EMLGQG---------- 430
K +L S+ DPD+ +Y LI K ++ AL++ D E LG G
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 431 ----------------------IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKI 468
IV ++ T T+ I+ C G + A + + R + +
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 469 SLSAYKLLLMRLSRFGKCGMLLNIWEEMQE------------------------------ 498
S+ Y LL L + G ++EEMQ
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 499 -----SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
+G S D+ Y +IN +G L+ A+ ++ + GF P I + ++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 554 NKVERAYKLFLKI 566
+ ++ +L K+
Sbjct: 648 GETDKLTELVKKL 660
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 193/485 (39%), Gaps = 108/485 (22%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+++++N++L+ L + + +LR++R + ++ + + V G + + KA+++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--------------------- 288
+ G + +L+ CK + A + +K
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 289 -----GKIPFN----------VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
GK F+ TYNT+I G+ K+GQ+ + +I E M+E G P+ T+
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKD-------YVL----------------------- 363
L+ GL G+ ++AL++ + ++EKD Y +
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 364 -----ETSVYNAMISNFISVGDLDEAIKYYRCLL--SNNCDPDIDTYTKLISAFIKARKV 416
+ YN ++ + GDLDEA K +L S+ DPD+ +Y LI K ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 417 ADALEMLD---EMLGQG--------------------------------IVPSTGTVTSF 441
AL++ D E LG G IV ++ T T+
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I+ C G + A + + R + + S+ Y LL L + G ++EEMQ
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
D+ + +I+G G +++A ++ G P YSKL N+ L ++ A
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 562 LFLKI 566
F K+
Sbjct: 621 FFDKM 625
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 165/375 (44%), Gaps = 7/375 (1%)
Query: 209 FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLL 268
F +L + G N+ +I+ GL R KA+ + D S N ++
Sbjct: 125 FAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 269 QCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT 327
+ C+ + A N +KG +++ T+ +I + K G++ + L+ M G
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
D + SL++G G ++ +FD ++E+ YN +I F +G L EA +
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+ ++ P++ TYT LI K +AL++L+ M+ + P+ T I LC
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG---KCGMLLNIWEEMQESGYSS- 503
G A+ I + +K + Y +LL L G + LL + +++S Y+
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM--LKDSSYTDP 422
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
D+ Y +I+GLC +L A+ + + + K R+ + L N L + V +A +L+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 564 LKIKAARSNENARRF 578
+I ++ N+ +
Sbjct: 483 KQISDSKIVRNSDTY 497
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 161/349 (46%), Gaps = 15/349 (4%)
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
+N +LS + + V+ ++ A + + GF + + N+LL+ LC+ A S
Sbjct: 105 INFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL 164
Query: 284 FNAV-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
+ + + +V +YNT+I G+ + ++ + ++ M G + T+ L+ +
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 343 AGRIEDALKIFDNL----VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
AG++++A+ + +E D V VY ++I F G+LD + +L P
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLV----VYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
TY LI F K ++ +A E+ + M+ +G+ P+ T T I+ LC G A+ +
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
+ + + Y +++ +L + G + I E M++ D Y ++ GLC
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 519 GQLENA----VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
G L+ A L++++S + P + Y+ L + L N++ +A ++
Sbjct: 401 GDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGLCKENRLHQALDIY 447
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 140/327 (42%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
A+ +F + G N++ + + R+H A + Y ++ N + + ++
Sbjct: 57 AVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ ++ + +L M++ GF + + LL+GL R A+ + + + +
Sbjct: 117 YVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPD 176
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YN +I F +L++A++ + + C + T+ LI AF KA K+ +A+ L
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM G+ TS I C G ++ + G Y L+ + G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+ I+E M E G ++ Y +I+GLC +G+ + A+ ++ + K P+ + Y+
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 545 KLYNKLLASNKVERAYKLFLKIKAARS 571
+ NKL V A ++ +K R+
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRT 383
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 146/343 (42%), Gaps = 14/343 (4%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRAL---GKKKFIDFMLKML--RDLRTEGITVNLETLSIV 232
F + I++ + P ++++Y ++ L GK K +L ++ +D +T N+ +
Sbjct: 305 FEFMIERGVRP-NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 233 ADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIP 292
DGLV A++I ++ D + N+LL LC + + A+ +
Sbjct: 364 KDGLVA-----DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 293 F---NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
+ +V +YN +I G K ++ Q I + +VE D T + LL +AG + A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
++++ + + V + Y AMI F G L+ A + + P + Y L+S+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
K + A + +EM P + I+ G +A + +AG
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
L Y L+ R + G ++ +++M +SG+ D + + ++
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 127/273 (46%), Gaps = 6/273 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITV-NLETLSIVADGLVRAQRVYKAIQI 248
D+ SYN ++ L K+ + L + DL E + + T +I+ + ++A V KA+++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSK 307
+ + ++++ ++ CK + A ++ ++ +V YN +++ K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + Q ++ E M D PD +F+ ++ G +AG I+ A + + +
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
Y+ +I+ F+ +G LDEAI ++ ++ + +PD ++ I + E++ +++
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
+ IV + ++ +C+ A M + KR
Sbjct: 662 DKDIVLDKELTCTVMDYMCN---SSANMDLAKR 691
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 179/449 (39%), Gaps = 60/449 (13%)
Query: 106 RNNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLY 165
RN S+ LE +V L K + + +S + L N GVDL V LY
Sbjct: 108 RNPGSHSLETHAIVLHT-LTKNRKFK-------SAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 166 RGNLGGEAMVIF------------FNWAIKQPMIPKD------IHSYNVILRALGKKKFI 207
+F F A M KD + S N + +L + +
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 208 DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVL 267
D L+ R++R I+ N TL++V G R+ ++ K I++ + E GF
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF---------- 269
Query: 268 LQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT 327
RA + +YNT+IAG + G + K+ M + G
Sbjct: 270 ----------RATD--------------VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
P+ TF++L+ G RA ++++A K+F + + T YN +I+ + GD + A ++
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
Y ++ N DI TY LI K K A + + E+ + +VP++ T ++ I C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
+YK ++GC + + +L+ R + EM D
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ NGL + G+ + +++E K F
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/406 (19%), Positives = 153/406 (37%), Gaps = 59/406 (14%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FFNWA + + ++ ++L L K + +LRD+ G ++ + V D L
Sbjct: 101 FFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNG---GVDLPAKVFDAL 157
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTES--LNVLLQCLCKRSHVRAANSYFNAVK--GKIP 292
+ + R CD+ + L + R A F +K G +P
Sbjct: 158 LYSYR----------------ECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLP 201
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
V + N ++ G+V + M +P+ T + ++ G R+G+++ +++
Sbjct: 202 -TVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
++ + YN +I+ G L A+K + + P++ T+ LI F +
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
A K+ +A ++ EM + P+T T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVT----------------------------------- 345
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y L+ S+ G M +E+M +G D+ Y +I GLC + A ++E
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELD 405
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+ P+ +S L +R ++L+ + + + N + F
Sbjct: 406 KENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 200/433 (46%), Gaps = 8/433 (1%)
Query: 139 NGKSAIESALANTGVDLSLDVVAKTLYRGNL--GGEAMVI-FFNWAIKQPMIPKDIHSYN 195
N + ++ +L+++G+ LS D++ + L R G + F+ +A S +
Sbjct: 53 NLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLD 112
Query: 196 VILRALGKKKFIDFMLKMLRDL-RTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE 254
+L LG+ + D + ++L + R + ++ T+ +V + + V + ++ F +
Sbjct: 113 TMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR 172
Query: 255 FGFGC-DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQ 313
DT N LL+ LC+ + A + ++++K + ++ T+N +++GW +
Sbjct: 173 LVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEA 232
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
+ ++ G PD T++SL+ + IE A K+ D + E++ + Y +I
Sbjct: 233 FFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
+G D+A + + + C PD+ Y I F AR++ DA +++DEM+ +G+ P
Sbjct: 290 GLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP 349
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+ T F L + +Y R C + + L+ R K M + +W
Sbjct: 350 NATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLW 409
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
E+M G+ S V + +++ LC++ ++E A + E + KG PS + + ++ + +
Sbjct: 410 EDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELA 469
Query: 554 NKVERAYKLFLKI 566
NK + L K+
Sbjct: 470 NKHDEVNNLIQKM 482
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 169/365 (46%), Gaps = 2/365 (0%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN I+ AL K + D L + D + +G+ T I+ GL +A R+ + ++I
Sbjct: 231 YNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKIGQVC 312
E D + +++ L ++ A+ ++ ++ +I +V Y T++ G K G+V
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ ++ M D + L++G G++ A ++++LV+ Y+ + +YNA+I
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVI 410
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
SV +D+A K ++ + +PD +T + ++ A++ +++D +L E +G+
Sbjct: 411 KGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL-ERIGELGY 469
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
P + +T F + LC+ +A + K S+S Y +L+ L + G L++
Sbjct: 470 PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSL 529
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
+ EM++ G+ D Y I G ++ A E+ + PS Y L L
Sbjct: 530 FYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQ 589
Query: 553 SNKVE 557
+++
Sbjct: 590 IGEID 594
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 142/316 (44%), Gaps = 8/316 (2%)
Query: 228 TLSIVADGLVRAQRVYKAIQIFG-NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
T SIVA+ L A + F ++ G+ D + N CL + H RAA+
Sbjct: 124 TPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPEL 183
Query: 287 V--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ +G+ P + + +I + + ++ + E M + GF P ++ ++ L + G
Sbjct: 184 MDSQGRPP-SEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNG 242
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+ AL ++++ E V E++ + ++ G ++E ++ + + N C PD+ YT
Sbjct: 243 YFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYT 302
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
+I + + +L + DEM I P + + LC G ++ +
Sbjct: 303 AMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
I Y++L+ GK N+WE++ +SGY +D+ +Y +I GLC++ Q++ A
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Query: 525 V----LVMEESLHKGF 536
+ +EE L F
Sbjct: 423 YKLFQVAIEEELEPDF 438
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 165/390 (42%), Gaps = 46/390 (11%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+++ + D+ +Y +++ L + +D L++ ++R + I ++ + GL + R
Sbjct: 289 MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA-NSYFNAVKGKIPFNVATYNT 300
V + ++F + D E VL++ VR+A N + + V ++ YN
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCST----------------FDSLLQGLGRAG 344
+I G + QV + K+ + +E+ PD T F ++L+ +G G
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Query: 345 -RIEDALKIFDNLVEKD-----------YVLET------SVYNAMISNFISVGDLDEAIK 386
+ D L F L+ D Y+L+T SVYN ++ +GD+ +++
Sbjct: 469 YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLS 528
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
+ + +PD +Y+ I F++ V A ++++ VPS S + LC
Sbjct: 529 LFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLC 588
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSA------YKLLLMRLSRFGKCGMLLNIWEEMQESG 500
G A M++ + C ++ + Y L + + + ++ + +EM + G
Sbjct: 589 QIGEIDAVMLLVRE-----CLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEG 643
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ +Y II+G+ G ++ A V E
Sbjct: 644 VFINEVIYCAIISGMSKHGTIKVAREVFTE 673
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 6/390 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F +K+ + P D+ ++N+++ L + + +++ + G + T + V
Sbjct: 180 FLKEMLKRKICP-DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF---NAVKGKIPF 293
+ R AI++ + + G D + N+L+ LC+ + R A Y + K I
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHP 296
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N TYNT+I G+S G+V ++L M+ G +P+ TF++L+ G G ++ALK+F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ K Y ++ + D A +Y + N TYT +I K
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ +A+ +L+EM GI P T ++ I C G A I R + G + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ R G + I+E M G++ D + ++ LC G++ A M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
G P+ + + L N S + +A+ +F
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 203/453 (44%), Gaps = 44/453 (9%)
Query: 134 FLQKLNGKSAIE--SALANTGVD---LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIP 188
+ +K K+AIE + + GVD + +++ L R N + ++ + +++ MI
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD--MRKRMIH 295
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
+ +YN ++ + + ++L ++ + G++ N T + + DG + +A+++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK------GKIPF--------- 293
F E G S VLL LCK + A ++ +K G+I +
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 294 ---------------------NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
++ TY+ +I G+ K+G+ K+I+ + G +P+
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ +L+ R G +++A++I++ ++ + + + +N ++++ G + EA ++ RC+
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
S+ P+ ++ LI+ + + + A + DEM G P+ T S ++ LC G
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 453 AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
A K + Y LL + + G ++++ EM + D Y +I
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 513 NGLCNIGQLENAVLVMEESLHKG-FCPSRLIYS 544
+GLC G+ A+L +E+ +G P++++Y+
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 173/415 (41%), Gaps = 19/415 (4%)
Query: 171 GEAMVIFFNWAIKQPMIPKD--IHSYNVILRALGKKKFIDFMLKMLRDLRTEG------- 221
G+ + F W +KQP + D + + L + + D +L++L
Sbjct: 50 GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF 109
Query: 222 ---------ITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
N I+ +R + +++IF +GF + N +L +
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169
Query: 273 KRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
K + S+ +K KI +VAT+N +I G + +++ M + G+ P
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
T++++L + GR + A+++ D++ K + YN +I + + + R +
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
P+ TY LI+ F KV A ++L+EML G+ P+ T + I+ S G
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A+ ++ G S +Y +LL L + + + + M+ +G Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
I+GLC G L+ AV+++ E G P + YS L N + + A ++ +I
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 159/383 (41%), Gaps = 11/383 (2%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y +L+ L K + K L+ L V+ + + + ++ + KA+ +FG
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
+ D+ + L+ LC++ A + +G + N Y + G K GQ
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
E M G TPD T ++++ G R G+IE + + ++ + YN
Sbjct: 700 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
++ + D+ + YR ++ N PD T L+ ++ + L++L + +G
Sbjct: 760 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC---KISLSAYKLLLMRLSRFGKCG 487
+ T I C+ G + A + K G K + A +L R RF +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
M+L+ EM + G S + Y +INGLC +G ++ A +V EE + CP + S +
Sbjct: 880 MVLH---EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936
Query: 548 NKLLASNKVERA---YKLFLKIK 567
L K + A + LK+K
Sbjct: 937 RALAKCGKADEATLLLRFMLKMK 959
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 182/476 (38%), Gaps = 50/476 (10%)
Query: 134 FLQKLNG-KSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIH 192
FL+ L+ +A+++ + NT ++ GNL V F +++ ++P D +
Sbjct: 600 FLKSLHAVPAAVDTVMYNT-------LLTAMCKSGNLA--KAVSLFGEMVQRSILP-DSY 649
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEG-ITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
+Y ++ L +K + ++ G + N + DG+ +A + I
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKI--PFNVATYNTIIAGWSKIG 309
+ G D + N ++ + + N + + P N+ TYN ++ G+SK
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP-NLTTYNILLHGYSKRK 768
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
V + +++ +G PD T SL+ G+ + +E LKI + + ++ +N
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+IS + G+++ A + + S D DT ++S + + ++ +L EM Q
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888
Query: 430 GIVPSTGTVTSFIEPLCSFG------------------PPHAAMMIYKRARKAGCKI--- 468
GI P + I LC G PP+ A RA K
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 469 --------------SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
+++++ L+ + G L + M G D+ Y +I G
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
LC G + A + EE GF + Y L LLA + LK AR
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1064
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 161/367 (43%), Gaps = 4/367 (1%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
I+F + DI + N ++ + I+ +L ++ + NL T +I+ G
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFN 294
+ + V + ++ + G D + + L+ +C+ + + A + + +
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
T+N +I+ G++ +++ M G + D T D+++ L R R +++ +
Sbjct: 824 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 883
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN-CDPDIDTYTKLISAFIKA 413
+ ++ E+ Y +I+ VGD+ A ++++ C P++ + ++ A K
Sbjct: 884 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVRALAKC 942
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K +A +L ML +VP+ + T+ + C G A+ + G K+ L +Y
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING-LCNIGQLENAVLVMEESL 532
+L+ L G + ++EEM+ G+ ++ Y+ +I G L A +++++ L
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1062
Query: 533 HKGFCPS 539
+GF S
Sbjct: 1063 ARGFITS 1069
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY--NAMISNFISVGDLDEAIKYY 388
S +D L++ R G I+D+L+IF + Y SVY NA++ + + G+ +
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFR--LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ +L PD+ T+ LI+ + ++ +M G P+ T + + C
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
G AA+ + + G + Y +L+ L R + + +M++ + Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+ING N G++ A ++ E L G P+ + ++ L + ++ + A K+F ++A
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 115/274 (41%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N + Y+ +I + + G + +I M GF P T +++L + ++G
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
++++ + + +N +I+ + G +++ + + + P I TY ++ + K
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A+E+LD M +G+ T I LC ++ + RK + Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ S GK + + EM G S + + +I+G + G + A+ +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
KG PS + Y L + L + + + A ++++K
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 156/350 (44%), Gaps = 3/350 (0%)
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL--CK 273
D+ +G++ ++ + + + +V +A+++F EE G + + N ++ L C
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 274 RSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
R +G P + TY+ ++ G ++ ++ +L+ M + GF P+ +
Sbjct: 310 RYDEAFMFKEKMVERGMEP-TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
++L+ AG + A++I D +V K L +S YN +I + G D A + + +LS
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
+ + ++T +I AL + EML + + P G +T+ I LC G
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A+ ++ + G + LL L GK I +E+ G D Y +I+
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
G C +L+ A + ++E + +G P YS L L NKVE A + +
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 168/373 (45%), Gaps = 7/373 (1%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
S+ ++ L D L+ + ++ ++ L+ + GL + + KA++++
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQV 311
GF DT + N LL LC+ + A + G+ + +YNT+I+G ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ L+ MV+ G PD T+ L+ GL ++E+A++ +D+ + + Y+ M
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I +E +++ ++S N P+ Y LI A+ ++ +++ ALE+ ++M +GI
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P++ T TS I+ + A ++++ R G + ++ Y L + +GK G ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL---IDGYGKLGQMVK 733
Query: 492 I---WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ EM + Y +I G G + A ++ E KG P + Y +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 549 KLLASNKVERAYK 561
L V A+K
Sbjct: 794 GYLKQGGVLEAFK 806
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 175/394 (44%), Gaps = 4/394 (1%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+F +++ M P I +Y+++++ L + K I +L+++ +G N+ + + D
Sbjct: 316 MFKEKMVERGMEPTLI-TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
+ A + KAI+I G + + N L++ CK A + I FNV
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNV 433
Query: 296 --ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ ++I + + M+ +P +L+ GL + G+ AL+++
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ K +V++T NA++ G LDEA + + +L C D +Y LIS
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+K+ +A LDEM+ +G+ P T + I L + A+ + ++ G + Y
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+++ + + ++EM + VY ++I C G+L A+ + E+ H
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
KG P+ Y+ L + ++VE A LF +++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 46/362 (12%)
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTII 302
Y A+ +F G + N+LL L + + + F+ V + +V + T I
Sbjct: 208 YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD-- 360
+ K G+V + K+ M E G P+ TF++++ GLG GR ++A + +VE+
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 361 -----------------------YVLE----------TSVYNAMISNFISVGDLDEAIKY 387
+VL+ VYN +I +FI G L++AI+
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
++S TY LI + K + +A +L EML G + G+ TS I LCS
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 448 FGPPHAAM-----MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
+A+ M+ + G ++ L+ L + GK L +W + G+
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
D +++GLC G+L+ A + +E L +G R+ Y+ L + K++ A+ +
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF-M 561
Query: 563 FL 564
FL
Sbjct: 562 FL 563
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 167/387 (43%), Gaps = 5/387 (1%)
Query: 182 IKQPMIPKDIH----SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
IK M+ K + +YN +++ K D ++L+++ + G VN + + V L
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS-HVRAANSYFNAVKGKIPFNVA 296
A++ G L L+ LCK H +A +F + +
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
T N ++ G + G++ + +I + ++ G D ++++L+ G ++++A D +
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
V++ + Y+ +I ++ ++EAI+++ N PD+ TY+ +I KA +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+ E DEM+ + + P+T I C G A+ + + + G + + Y L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ +S + ++EEM+ G ++ Y +I+G +GQ+ ++ E K
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLF 563
P+++ Y+ + V A +L
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 133/306 (43%), Gaps = 7/306 (2%)
Query: 265 NVLLQCLC---KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEA- 320
++L++ C KR A F + K F T I+ + + + + +K EA
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNIL--LTSLVRANEFQKCCEAF 249
Query: 321 -MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
+V G +PD F + + + G++E+A+K+F + E +N +I G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
DEA + ++ +P + TY+ L+ +A+++ DA +L EM +G P+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+ I+ G + A+ I G ++ S Y L+ + G+ + +EM
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G++ + + +I LC+ ++A+ + E L + P + + L + L K +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 560 YKLFLK 565
+L+ +
Sbjct: 490 LELWFQ 495
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 163 TLYRGNLGGEAM---VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRT 219
TL G G + + +F + +K+ + P D ++Y++++ L ++ ++ D +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKP-DNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA 279
G+ ++ T S++ DG +A+R + + F +T N L++ C+ +
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 280 ANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ 338
A +K K I N ATY ++I G S I +V + K + E M +G P+ + +L+
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
G G+ G++ + + K+ Y MI + G++ EA + + P
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Query: 399 DIDTYTKLISAFIKARKVADALEMLDE 425
D TY + I ++K V +A + DE
Sbjct: 784 DSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 1/230 (0%)
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
AL +F L K + N ++++ + + + + + ++ PD+ +T I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKI 468
AF K KV +A+++ +M G+ P+ T + I+ L G A M ++ + G +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 469 SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+L Y +L+ L+R + G + +EM + G+ ++ VY +I+ G L A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 529 EESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+ + KG + Y+ L + + + A +L ++ + N N F
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 164/380 (43%), Gaps = 7/380 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I DI +YN +++ K ++ LRD+ T G + T + +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
++ +E G + ++++ LCK + + F + KG P NVA Y +I G
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NVAIYTVLIDG 371
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
++K G V ++L M+++GF PD T+ ++ GL + GR+E+AL F +
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ Y+++I G +DEA + + + C D Y LI AF K RKV +A+ +
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 425 EMLGQ-GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
M + G + T T + + A+ ++ G + + ++ L L
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 484 GKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF-CPSRLI 542
GK I +E+ G D E +IN LC G+++ A + + +G P R I
Sbjct: 552 GKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGREVPGR-I 609
Query: 543 YSKLYNKLLASNKVERAYKL 562
+ + N L K + A KL
Sbjct: 610 RTVMINALRKVGKADLAMKL 629
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 180/443 (40%), Gaps = 75/443 (16%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
G LG +++ +K+ I +++YN ++ L F+D ++ + + I ++
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC---------------- 270
T + + G +A + KA++ + E G D + ++Q
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 271 -------------------LCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIG 309
LCK + + F + KG P NVA Y +I G++K G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NVAIYTVLIDGYAKSG 376
Query: 310 QVCQMKKILEAMVEDGFTPDCST-----------------------------------FD 334
V ++L M+++GF PD T +
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY-RCLLS 393
SL+ GLG+AGR+++A ++F+ + EK ++ YNA+I F +DEAI + R
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
CD + TYT L+S K + +AL++ D M+ +GI P+ + LC G
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A I G + +A + ++ L + G+ + + + E G + +IN
Sbjct: 557 ACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 514 GLCNIGQLENAVLVMEESLHKGF 536
L +G+ + A+ +M + G+
Sbjct: 616 ALRKVGKADLAMKLMHSKIGIGY 638
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 162/388 (41%), Gaps = 35/388 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F + IK+ P + + N ++++ GK ++ +L + R ++ GI L T + + +GL
Sbjct: 173 FVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL 232
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVA 296
V A V A ++F E G+I ++
Sbjct: 233 VSAMFVDSAERVFEVMES----------------------------------GRIKPDIV 258
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TYNT+I G+ K GQ + + L M G D T+ +++Q + ++ +
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
EK + ++ +I G L+E + ++ P++ YT LI + K+ V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
DA+ +L M+ +G P T + + LC G A+ + R G I+ Y L
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ L + G+ ++EEM E G + D Y +I+ +++ A+ + + +
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 537 CPSRL-IYSKLYNKLLASNKVERAYKLF 563
C + Y+ L + + ++ E A KL+
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLW 526
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 162/358 (45%), Gaps = 4/358 (1%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F++A +QP S+ +++ LG+ ++ + + +L R+ G + E + +
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC-KRSHVRAANSYFNA--VKGKIPFN 294
A+ K + F EF F + LN +L L R +++ A F + + G +P N
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP-N 189
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
+YN ++ + + ++ M+E PD ++ L+QG R G++ A+++ D
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+++ K +V + Y ++++ L EA K + C+PD+ Y +I F +
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ DA ++LD+ML G P++ + + I LC G + G S
Sbjct: 310 RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN 369
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
L+ FGK ++ E + ++G + + +E +I +CN + E L +E+++
Sbjct: 370 CLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 1/240 (0%)
Query: 321 MVEDGFTPDCSTFDSLLQGL-GRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M+E FTP + +L L G ++ A ++F + + T YN ++ F
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
DL A + + +L + PD+D+Y LI F + +V A+E+LD+ML +G VP + T
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYT 264
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+ + LC A + R + GC L Y +++ R + + ++M +
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
G S + Y +I GLC+ G + +EE + KGF P + + L + KVE A
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 401 DTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF-GPPHAAMMIYK 459
+ +T LI + +A+ L +ML P + ++ L S G A ++K
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+R G + +Y LL+ + ++ +M E D++ Y+ +I G C G
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
Q+ A+ ++++ L+KGF P RL Y+ L N L ++ AYKL ++K N +
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 190/431 (44%), Gaps = 7/431 (1%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQP----MIPKDIHSYNVILRALGKKKFIDFM 210
++L ++ TL + EA+ +F K+ +I D +N ++ L K +
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 211 LKMLRDLRTEGITV-NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQ 269
++L ++ E V N T + + DG RA ++ A ++ +E + ++N ++
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 270 CLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
+C+ + A +F + K + NV TY T+I + V + E M+E G +P
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D + +L+ GL + R DA+++ + L E + L+ YN +I F + ++ +
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ PD TY LIS F K + M+++M G+ P+ T + I+ CS
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 449 GPPHAAMMIYK-RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A+ ++K + + Y +L+ S+ G G L++ EEM+ ++E
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
Y + L Q E + +M+E + + P+++ L +L S+++ + K
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYS 749
Query: 568 AARSNENARRF 578
A E A F
Sbjct: 750 VASPTEKASPF 760
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 18/390 (4%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRD-LRTEG------ITVNLETLSIVADGLVRAQR 241
K+ NV++ L + +D K+L + L+ E IT ++ + + L+ ++
Sbjct: 183 KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK 242
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNT 300
+ I F + G ++ L + LCK + A + +K K P +N
Sbjct: 243 IIALISRFSS---HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK- 359
+++ + + +M ++ M E PD T L+ L ++ R+++AL++F+ + K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 360 ----DYVLETSV-YNAMISNFISVGDLDEAIK-YYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + S+ +N +I VG L EA + R L C P+ TY LI + +A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ A E++ M I P+ TV + + +C + A++ + K G K ++ Y
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ + +E+M E+G S D ++Y +I+GLC + + +A+ V+E+
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
GF L Y+ L N E+ Y++
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 7/262 (2%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G +P+ + L + R A I +L++ LE +NA++S D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ----GIVPSTGTV-- 438
+ PD+ T LI+ K+R+V +ALE+ ++M G+ G V ++
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 439 TSFIEPLCSFGPPHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+ I+ LC G A + R + + C + Y L+ R GK + M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
E ++ I+ G+C L AV+ + +G + + Y L + + + VE
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 558 RAYKLFLKIKAARSNENARRFW 579
+A + K+ A + +A+ ++
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYY 515
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 175/391 (44%), Gaps = 13/391 (3%)
Query: 193 SYNVILRALGKKKFI----DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
SY I+ L K+K I D M KM ++ G+ + T + + L + +A+
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKE---HGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWS 306
+ +E GF D + ++ LCK + A N + KG P +V TY ++ G+
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
++G+V + KK+L+ M G P+ ++ +LL G+ R G+ +A ++ N+ E+ + S
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-NMSEEHWWSPNS 524
Query: 367 V-YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+ Y+ ++ G L EA R ++ P L+ + + + +A + ++E
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
L +G + T+ I C AA+ + + Y L+ L + G+
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 644
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
+ ++M G Y +I+ C +G++++ V ++E+ + + C R IY++
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQ 702
Query: 546 LYNKLLASNKVERAYKLFLKIKAARSNENAR 576
+ KL K+E A L K+ S +A+
Sbjct: 703 VIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 5/391 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF WA +Q D Y +L L K K ++L ++ GI E S V
Sbjct: 193 FFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSY 252
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFN 294
RA ++ A+++ + G + N + + + + A + V G +P N
Sbjct: 253 SRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP-N 311
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V TYN +I G+ + +V + ++LE M G PD ++ +++ L + RI + +
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 355 NLV-EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ E V + YN +I DEA+ + + D Y+ ++ A K
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
Query: 414 RKVADALEMLDEMLGQG-IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
++++A ++++EML +G P T T+ + C G A + + G K + +
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y LL + R GK + +E +S + Y I++GL G+L A V+ E +
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
KGF P + + L L + A K
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 10/287 (3%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
++ ++ +S+ GQ+ K+L M G P+ ++ + RA R+E AL+ + +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
V YN MI + + ++EAI+ + S C PD +Y ++ K +++
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 418 DALEMLDEMLGQ-GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+ +++ +M + G+VP T + I L A+ K A++ G +I Y +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGY-SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
+ L + G+ ++ EM G+ D+ Y ++NG C +G+++ A +++ G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFWRAN 582
P+ + Y+ L N + + K A ++ N + +W N
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMM--------NMSEEHWWSPN 523
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/449 (19%), Positives = 185/449 (41%), Gaps = 62/449 (13%)
Query: 122 LFLLPEEKLRGVFLQKLNGKSAIESALANTG-VDLSLDVVAKTLYRGNLGGEAMVIFFNW 180
L+ L + + +G + KL G SAI AL G + + D++ + L +G+
Sbjct: 403 LWFLKDAQEKGFRIDKL-GYSAIVHALCKEGRMSEAKDLINEMLSKGH------------ 449
Query: 181 AIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQ 240
P D+ +Y ++ + +D K+L+ + T G N + + + +G+ R
Sbjct: 450 ------CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATY 298
+ +A ++ +EE + ++ + +V++ L + + A +KG P V
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI- 562
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
N ++ + G+ + +K +E + G + F +++ G + ++ AL + D++
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM-- 620
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
Y++ N D+ TYT L+ K ++A+
Sbjct: 621 --YLI-------------------------------NKHADVFTYTTLVDTLGKKGRIAE 647
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRA-RKAGCKISLSAYKLLL 477
A E++ +ML +GI P+ T + I C G + I ++ + C+ + Y ++
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVI 704
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
+L GK + ++ + SD + ++ G G +A V ++
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKI 566
P + KL +L+ KV+ A KL L++
Sbjct: 765 PDVKMCEKLSKRLVLKGKVDEADKLMLRL 793
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 171/377 (45%), Gaps = 12/377 (3%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN + L ++ + + D++ G ++ T S GL + ++ + + E
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVR-AANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQV 311
GF D + NV L LC+ + V A ++F V +G+ P +V +Y +I G + G+V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP-DVVSYTILINGLFRAGKV 165
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV-LETSVYNA 370
+I AM+ G +PD +L+ GL A +++ A ++ ++ V L T VYNA
Sbjct: 166 TDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNA 225
Query: 371 MISNFISVGDLD--EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+IS F G ++ EA+K Y + C+PD+ TY L++ + + A ++ EM+
Sbjct: 226 LISGFCKAGRIEKAEALKSY--MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAA--MMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
GI + ++ C P M+ + + C + +Y L+ R
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDV--VSYSTLIETFCRASNT 341
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
++EEM++ G ++ Y +I G A ++++ G P R+ Y+ +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 547 YNKLLASNKVERAYKLF 563
+ L S V++AY +F
Sbjct: 402 LDHLCKSGNVDKAYGVF 418
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 167/382 (43%), Gaps = 9/382 (2%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
IP DI ++NV L L ++ + F ++ + G ++ + +I+ +GL RA +V A+
Sbjct: 111 IP-DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAV 169
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-----KGKIPFNVATYNTI 301
+I+ G D ++ L+ LC H R + + V ++ + YN +
Sbjct: 170 EIWNAMIRSGVSPDNKACAALVVGLC---HARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I+G+ K G++ + + + M + G PD T++ LL ++ A + +V
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
L+ YN ++ V D+ + + D+ +Y+ LI F +A A
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYR 346
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+ +EM +G+V + T TS I+ G A + + + G Y +L L
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ G ++ +M E + D Y +I+GLC G++ A+ + E+ K CP L
Sbjct: 407 KSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDEL 466
Query: 542 IYSKLYNKLLASNKVERAYKLF 563
+ + L+ K+ AYK++
Sbjct: 467 TFKFIIGGLIRGKKLSAAYKVW 488
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG------LVRAQRVY 243
D+ +YNV+L + + MLK R EG+ + I D L R RV
Sbjct: 254 DLVTYNVLLNYY----YDNNMLK-----RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 244 KAIQIFG----NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATY 298
+ + E GF CD S + L++ C+ S+ R A F ++ K + NV TY
Sbjct: 305 HPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
++I + + G KK+L+ M E G +PD + ++L L ++G ++ A +F++++E
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+ + YN++IS G + EAIK + + C PD T+ +I I+ +K++
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
A ++ D+M+ +G + I+ CS
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 10/338 (2%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK----GKI 291
LV++ + A+Q+F + + N + L + S A + + +K I
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
PF TY+ I+G K+ + + +L M GF PD F+ L L R ++ A++
Sbjct: 79 PF---TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
F +V++ + Y +I+ G + +A++ + ++ + PD L+
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 412 KARKVADALEMLDEMLGQGIVP-STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
ARKV A EM+ E + V ST + I C G A + K GC+ L
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV-LVME 529
Y +LL + EM SG D Y ++ C + + +++
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
E +GFC + YS L ++ +AY+LF +++
Sbjct: 316 EMEPRGFCDV-VSYSTLIETFCRASNTRKAYRLFEEMR 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 158/368 (42%), Gaps = 9/368 (2%)
Query: 158 DVVAKT-----LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLK 212
DVV+ T L+R +A+ I+ N I+ + P D + ++ L + +D +
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIW-NAMIRSGVSP-DNKACAALVVGLCHARKVDLAYE 205
Query: 213 ML-RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
M+ ++++ + ++ + + G +A R+ KA + + G D + NVLL
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 272 CKRSHV-RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
+ + RA V+ I + +YN ++ ++ + + +E D
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDV 325
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
++ +L++ RA A ++F+ + +K V+ Y ++I F+ G+ A K
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ PD YT ++ K+ V A + ++M+ I P + S I LC G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ +++ + C +K ++ L R K +W++M + G++ D +V +
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 511 IINGLCNI 518
+I C++
Sbjct: 506 LIKASCSM 513
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 5/233 (2%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI--SVGDLDEAIKYYRC 390
+ S + L ++G I++A+++FD + Y + + YN I + S +L EAI +
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ + P TY++ IS K +K +L +M G +P +++ LC
Sbjct: 72 PMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ + + G + + +Y +L+ L R GK + IW M SG S D +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 511 IINGLCNIGQLENAV-LVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
++ GLC+ +++ A +V EE S ++Y+ L + + ++E+A L
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 191/434 (44%), Gaps = 13/434 (2%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQP----MIPKDIHSYNVILRALGK----KKF 206
++L ++ TL + EA+ +F K+ +I D +N ++ L K K+
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 207 IDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNV 266
+ +++M + E N T + + DG RA ++ A ++ +E + ++N
Sbjct: 390 EELLVRMKLE---ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 267 LLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG 325
++ +C+ + A +F + K + NV TY T+I + V + E M+E G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
+PD + +L+ GL + R DA+++ + L E + L+ YN +I F + ++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+ + PD TY LIS F K + M+++M G+ P+ T + I+
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 446 CSFGPPHAAMMIYK-RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
CS G A+ ++K + + Y +L+ S+ G G L++ EEM+ +
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 505 MEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFL 564
+E Y + L Q E + +M+E + + P+++ L +L S+++ + K
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Query: 565 KIKAARSNENARRF 578
A E A F
Sbjct: 747 GYSVASPTEKASPF 760
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 20/391 (5%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRD-LRTEGI-TVNLETLSIVADGLVRAQRVY--K 244
K+ NV++ L + +D K+L + L+ E + N T IV + + + + K
Sbjct: 183 KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEK 242
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIA 303
I + G ++ L + LCK + AA + +K K P +N +++
Sbjct: 243 IIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS 302
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD--------- 354
+ + +M ++ M E PD T L+ L ++ R+++AL++F+
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDD 362
Query: 355 -NLVEKDYVLETSVYNAMISNFISVGDLDEAIK-YYRCLLSNNCDPDIDTYTKLISAFIK 412
N+++ D + +N +I VG L EA + R L C P+ TY LI + +
Sbjct: 363 GNVIKADSIH----FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCR 418
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
A K+ A E++ M I P+ TV + + +C + A++ + K G K ++
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y L+ + +E+M E+G S D ++Y +I+GLC + + +A+ V+E+
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
GF L Y+ L N E+ Y++
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 7/262 (2%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G +P+ + L + R A I +L++ LE +NA++S D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ----GIVPSTGTV-- 438
+ PD+ T LI+ K+R+V +ALE+ ++M G+ G V ++
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 439 TSFIEPLCSFGPPHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+ I+ LC G A + R + + C + Y L+ R GK + M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
E ++ I+ G+C L AV+ + +G + + Y L + + + VE
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 558 RAYKLFLKIKAARSNENARRFW 579
+A + K+ A + +A+ ++
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYY 515
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 152/354 (42%), Gaps = 4/354 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FFNWA P Y + ++L K + M K+L+ ++ + ++ ETL + +
Sbjct: 97 FFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQY 156
Query: 237 VRAQRVYKAIQIF-GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPF 293
+ V +A+++F G + G + N LL LC A + + KG P
Sbjct: 157 GKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP- 215
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+ TY ++ GW G++ + ++ L+ M GF P D L++GL AG +E A ++
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + +V + +N +I G+++ I+ Y DIDTY LI A K
Sbjct: 276 SKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKI 335
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ +A +L+ + G P I+ +C G A + + + Y
Sbjct: 336 GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+L+ R GK N EM E G ++ + +GL N G+ + A+ +
Sbjct: 396 TMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET-SVYNAMI 372
M KIL+ M + T +++ G+ G ++ A+++F+ + + +T VYN+++
Sbjct: 130 MWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLL 189
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
V A R ++ PD TY L++ + A K+ +A E LDEM +G
Sbjct: 190 HALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFN 249
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
P IE L + G +A + + K G + + +L+ +S+ G+ + +
Sbjct: 250 PPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
+ + G D++ Y+ +I + IG+++ A ++ + G P +Y+ + +
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR 369
Query: 553 SNKVERAYKLF--LKIKAARSN 572
+ + A+ F +K+KA N
Sbjct: 370 NGMFDDAFSFFSDMKVKAHPPN 391
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 11/313 (3%)
Query: 256 GFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQM 314
G D +LNVL+ CK + A S N V I + TYNT+I+G + G +
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEA 180
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
+ L MV+ G PD ++++L+ G + G A + D + E + + T ++S+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHT----ILLSS 236
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
+ ++ ++EA YR ++ + DPD+ T++ +I+ K KV + +L EM + P+
Sbjct: 237 YYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPN 293
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWE 494
T T+ ++ L A+ +Y + G + L Y +L+ L + G ++
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
+ E ++ Y +++GLC G L +A ++ + L K P+ + YS + N +
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 555 KVERAYKLFLKIK 567
+E A L K++
Sbjct: 414 MLEEAVSLLRKME 426
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 199/446 (44%), Gaps = 38/446 (8%)
Query: 136 QKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGG---EAMVIFFNWAIKQPMIPKDIH 192
++L G + SA+ GV + +++ N+ G + + + ++ I + P D+
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSP-DVF 130
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+ NV++ + K + F + +LR+ I+++ T + V GL +A Q
Sbjct: 131 ALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 253 EEFGFGCDTESLNVLLQCLCKR-------------------SHVRAANSYFN-------- 285
+ G DT S N L+ CK +H +SY+N
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 286 ---AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
+ G P +V T+++II K G+V + +L M E P+ T+ +L+ L +
Sbjct: 248 RDMVMSGFDP-DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
A AL ++ +V + ++ VY ++ GDL EA K ++ LL +N P++ T
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
YT L+ KA ++ A ++ +ML + ++P+ T +S I G A+ + ++
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLE 522
+ Y ++ L + GK M + + +EM+ G + + + ++N L IG+++
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 523 NAVLVMEESLHKGFCPSRLIYSKLYN 548
++++ + KG ++ Y+ L +
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 4/309 (1%)
Query: 179 NWA---IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+WA +++ I DI ++N+++ + K+ + +LK+ +++ GI +L + +IV
Sbjct: 558 DWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA-NSYFNAVKGKIPFN 294
L ++ +AI I + + + L K A ++ + I +
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
YNT+IA K+G + ++ M GF PD TF+SL+ G + AL +
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
++E + YN +I G + E K+ + S PD TY LIS K
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ ++ + EM+ G+VP T T I + G A + K K G + S Y
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYC 857
Query: 475 LLLMRLSRF 483
++ L +
Sbjct: 858 TMISGLCKL 866
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 170/442 (38%), Gaps = 72/442 (16%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ +L K L + + GI V+L +++ DGL +A + +A + F
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
E + + L+ LCK + +A + K IP NV TY+++I G+ K G
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP-NVVTYSSMINGYVKKGM 414
Query: 311 VCQMKKILEAMVEDGFTPDCSTF-----------------------------------DS 335
+ + +L M + P+ T+ D+
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD------------- 382
L+ L R GRI++ + ++V K L+ Y ++I F GD +
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 383 ---EAIKY------------------YRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
+ + Y Y+ + +PDI T+ ++++ K L+
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+ D+M GI PS + + LC G A+ I + +L+ Y++ L S
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ + + E + G +VY +I LC +G + A +VM + +GF P +
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 542 IYSKLYNKLLASNKVERAYKLF 563
++ L + + V +A +
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTY 736
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 151/366 (41%), Gaps = 3/366 (0%)
Query: 198 LRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGF 257
L+ +G+ K + ++K D+ ++G+T++ + + D + A+ +E G
Sbjct: 479 LKRIGRIKEVKGLVK---DMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 258 GCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKI 317
D S NVL+ + K V A +Y + I ++AT+N ++ K G + K+
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
+ M G P + + ++ L G++E+A+ I + ++ + + Y +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
D K + LLS Y LI+ K A ++ +M +G +P T T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
S + A+ Y +AG +++ Y ++ LS G + EM+
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G D Y +I+G IG ++ ++ + E + G P Y+ L ++ K+
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 558 RAYKLF 563
+A +L
Sbjct: 836 QARELL 841
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 179/404 (44%), Gaps = 6/404 (1%)
Query: 160 VAKTLYRGNLGGEAMVIFFNWAIKQ--PMIP--KDIHSYNVILRALGKKKFIDFMLKMLR 215
+A L R N AM +F N + P P + Y++I+ LG K D + ++L
Sbjct: 12 LASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 216 DLRTEGITVNLETLSI-VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
L+T+ V E + V + R + +A+ +F ++ +SLN LL L K
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKC 131
Query: 275 SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
+ +++ + TYN +I G S+ G K+ + MV+ P TF
Sbjct: 132 GELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLET-SVYNAMISNFISVGDLDEAIKYYRCLLS 393
+L+ GL + R+++ALK+ ++++ V T +Y ++I +G+L A K
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
D Y+ LIS+ IKA + + +L+EM +G P T T I C +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A + + G K + +Y ++L R K ++E+M G S D Y + +
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
GLC Q E A ++++E L KG+ P R KL S K+E
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+ YN +I G D+A+K + ++ P T+ LI K +V +AL+M
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 424 DEMLG-QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
+ML G+ P+ S I+ LC G A + A + K+ + Y L+ L +
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
G+ + I EEM E G D Y +ING C E+A V++E + KG P +
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 543 YSKLYNKLLASNKVERAYKLF 563
Y+ + K E A LF
Sbjct: 331 YNMILGVFFRIKKWEEATYLF 351
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 1/269 (0%)
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKI 291
+ +GL + A+ + EE N ++ LCK H A + F + K
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 292 PF-NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
F +V TY+ +I + + G+ +++L M+E PD TF +L+ L + G++ +A
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+I+ +++ + T YN+MI F L++A + + S +C PD+ T++ LI+ +
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
KA++V + +E+ EM +GIV +T T T+ I C G AA + +G +
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
++ +L L + I E++Q+S
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 140/320 (43%), Gaps = 9/320 (2%)
Query: 258 GC--DTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQ 313
GC D + L+ LC V A + + + +G P Y TII G K+G
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP-----YGTIINGLCKMGDTES 59
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
+L M E +++++ L + G A +F + +K + Y+ MI
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
+F G +A + R ++ +PD+ T++ LI+A +K KV++A E+ +ML +GI P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+T T S I+ C + A + C + + L+ + + + I+
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLAS 553
EM G ++ Y +I+G C +G L+ A ++ + G P+ + + + L +
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Query: 554 NKVERAYKLFLKIKAARSNE 573
++ +A+ + ++ + +
Sbjct: 300 KELRKAFAILEDLQKSEGHH 319
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 5/311 (1%)
Query: 221 GITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA 280
G ++ T + + +GL RV +A+ + E G + ++ LCK +A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTESA 60
Query: 281 NSYFNAVK-GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ + ++ I +V YN II K G + + M + G PD T+ ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
R+GR DA ++ +++E+ + ++A+I+ + G + EA + Y +L P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
TY +I F K ++ DA MLD M + P T ++ I C M I+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G + Y L+ + G ++ M SG + + ++ ++ LC+
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 520 QLENAVLVMEE 530
+L A ++E+
Sbjct: 301 ELRKAFAILED 311
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+++ I + YN I+ L K + ++ +GI ++ T S + D R+ R
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYN 299
A Q+ + E D + + L+ L K V A + + +G P + TYN
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI-TYN 185
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
++I G+ K ++ K++L++M +PD TF +L+ G +A R+++ ++IF + +
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
V T Y +I F VGDLD A ++S+ P+ T+ ++++ +++ A
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 420 LEMLDEM 426
+L+++
Sbjct: 306 FAILEDL 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 4/246 (1%)
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
MVE G PD TF +L+ GL GR+ AL + D +VE+ + Y +I+ +GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+ A+ + + + Y +I K A + EM +GI P T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I+ C G A + + + + + L+ L + GK I+ +M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
Y +I+G C +L +A +++ K P + +S L N + +V+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 561 KLFLKI 566
++F ++
Sbjct: 237 EIFCEM 242
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 188/431 (43%), Gaps = 19/431 (4%)
Query: 135 LQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSY 194
+ +L ++ ++L ++ DL+ D ++ + F W K+ D S
Sbjct: 101 VSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGC--DDQKSC 158
Query: 195 NVILRALGKKKFIDFMLKMLRDLRTEGITVNLET---LSIVADGLVRAQRVYKAIQIFGN 251
++++ LG + + ++RD+ V+ +T + ++ D A +AI+ F
Sbjct: 159 DLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDI 214
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKI-GQ 310
++F E+ LL LC+ H+ A + A K P +V +N I+ GW I
Sbjct: 215 MDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTD 274
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
V + K+I M TP+ ++ ++ + G + D+L+++D + ++ VYN+
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
++ DEA+K + L PD TY +I +A K+ A +L M+ +
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
+ P+ T +F+E + +F + + + + + + + L+L +L + + L
Sbjct: 395 LSPTVDTFHAFLEAV-NF---EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENAL 450
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
IW EM ++ +Y I GL + G LE A + E KGF + + + KL
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF-----VGNPMLQKL 505
Query: 551 LASNKVERAYK 561
L KV+ K
Sbjct: 506 LEEQKVKGVRK 516
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 6/255 (2%)
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
Q + + M + TP F LL L R G IE A + F +K + ++ +N ++
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKKLFPVDVEGFNVIL 265
Query: 373 SNFISV-GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+ + ++ D+ EA + +R + + P+ D+Y+ +IS F K + D+L + DEM +G+
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P S + L AM + K+ + G K Y ++ L GK + N
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
+ M S ++ + + + E + V+ + P+ + + KL
Sbjct: 386 VLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLF 441
Query: 552 ASNKVERAYKLFLKI 566
+ E A K++ ++
Sbjct: 442 KGKQPENALKIWAEM 456
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 216/520 (41%), Gaps = 60/520 (11%)
Query: 96 ANAAPTAHPYRNNQSNKLEES-----KVVADLFL--LPEEKLRGVFLQKLNGKSAIESAL 148
++ A P +NN + K+V+ LF+ +P+ L +L K
Sbjct: 17 SHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSK----------- 65
Query: 149 ANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFID 208
N +S +VV K ++G F+ ++ + I +YN++ R+L K D
Sbjct: 66 -NLNPFISFEVVKKLDNNPHIGFR----FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHD 120
Query: 209 FMLKMLRDLRTEGITVNLETLSIVA---------------------------------DG 235
+M ++++G++ N L + +
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNT 180
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFN 294
LV+ RV A+++F F DT++ N+L++ LC A + G +
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDG--FTPDCSTFDSLLQGLGRAGRIEDALKI 352
+ TYNT+I G+ K ++ + ++ + V+ G +PD T+ S++ G +AG++ +A +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D+++ +N ++ + G++ A + ++S C PD+ T+T LI + +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+V+ + +EM +G+ P+ T + I LC+ A + +
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y ++ + GK I EEM++ D + +I G C G++ AV + + +
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSN 572
G P ++ S L + LL + + AY L + +SN
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSN 519
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 216/520 (41%), Gaps = 60/520 (11%)
Query: 96 ANAAPTAHPYRNNQSNKLEES-----KVVADLFL--LPEEKLRGVFLQKLNGKSAIESAL 148
++ A P +NN + K+V+ LF+ +P+ L +L K
Sbjct: 17 SHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFCYLSK----------- 65
Query: 149 ANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFID 208
N +S +VV K ++G F+ ++ + I +YN++ R+L K D
Sbjct: 66 -NLNPFISFEVVKKLDNNPHIGFR----FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHD 120
Query: 209 FMLKMLRDLRTEGITVNLETLSIVA---------------------------------DG 235
+M ++++G++ N L + +
Sbjct: 121 LAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNT 180
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFN 294
LV+ RV A+++F F DT++ N+L++ LC A + G +
Sbjct: 181 LVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPD 240
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDG--FTPDCSTFDSLLQGLGRAGRIEDALKI 352
+ TYNT+I G+ K ++ + ++ + V+ G +PD T+ S++ G +AG++ +A +
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D+++ +N ++ + G++ A + ++S C PD+ T+T LI + +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+V+ + +EM +G+ P+ T + I LC+ A + +
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y ++ + GK I EEM++ D + +I G C G++ AV + + +
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSN 572
G P ++ S L + LL + + AY L + +SN
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSN 519
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 175/395 (44%), Gaps = 45/395 (11%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
++M ++ G +++ + V D L+ R+ ++ + + GF + + NVLL+
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 271 LCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
LCK + V A + KG P + +Y T+I+ ++G V + +++ E F P
Sbjct: 191 LCKNNKVDGAKKLLVEMSNKGCCP-DAVSYTTVISSMCEVGLVKEGRELAER-----FEP 244
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
S +++L+ GL + + A ++ +VEK Y+ +I+ + G ++ A +
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML-GQGIVPSTGTVTSFIEPLCS 447
+L C P+I T + L+ DAL++ ++M+ G G+ P+ + ++ CS
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A+ ++ + GC ++ Y L+ ++ G + IW +M SG ++ V
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 508 YEYI-----------------------------------INGLCNIGQLENAVLVMEESL 532
Y + I GLC+ G+L+ A V +
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 533 HKGFCPSRLI-YSKLYNKLLASNKVERAYKLFLKI 566
+ CP ++ Y++L + L +N++E AY L +I
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 211/513 (41%), Gaps = 52/513 (10%)
Query: 109 QSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIES--ALANTGVDLSLDVVAKTLYR 166
Q KL+ DLF+ + V+ Q + A+E + G D S+ + L
Sbjct: 100 QQMKLQGFHCSEDLFI----SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVL-- 153
Query: 167 GNLGGE---AMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L GE M+ +K+ ++ +YNV+L+AL K +D K+L ++ +G
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 224 VNLETLSIVAD-----GLVRAQR-----------VYKAI--------------QIFGNTE 253
+ + + V GLV+ R VY A+ ++
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMV 273
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQV 311
E G + S + L+ LC + A S+ + +G P N+ T ++++ G G
Sbjct: 274 EKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP-NIYTLSSLVKGCFLRGTT 332
Query: 312 CQMKKILEAMVED-GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ M+ G P+ +++L+QG G I A+ +F ++ E Y +
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I+ F G LD A+ + +L++ C P++ YT ++ A + K +A +++ M +
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRA-RKAGCKISLSAYKLLLMRLSRFGKCGML 489
PS T +FI+ LC G A ++++ ++ C ++ Y LL L++ +
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
+ E+ G Y +++G CN G A+ ++ + + G P + + +
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 550 LLASNKVERAYKLFLKIKAARSNENARRFWRAN 582
K ERA ++ + RR WR +
Sbjct: 573 YCKQGKAERAAQMLDLVSC------GRRKWRPD 599
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
T+ +I + GQV ++ +L+ M GF F S++ + G E A+++F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
E +YN ++ + + YR + + +P++ TY L+ A K KV
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS--LSAYK 474
A ++L EM +G P + T+ I +C G + K R+ + +S Y
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-------LVKEGRELAERFEPVVSVYN 250
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
L+ L + + EM E G S ++ Y +IN LCN GQ+E A + + L +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 535 GFCPSRLIYSKL 546
G P+ S L
Sbjct: 311 GCHPNIYTLSSL 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+I +Y ++ K+ +D + + + T G N+ + + + L R + +A +
Sbjct: 386 NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI 445
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ + N ++ LC + A F + + + P N+ TYN ++ G +K
Sbjct: 446 EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK 505
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
++ + + + G ST+++LL G AG AL++ ++ +
Sbjct: 506 ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLS---NNCDPDIDTYTKLISAFIKARKVADALEMLD 424
N +I + G + A + L+S PD+ +YT +I ++ D + +L+
Sbjct: 566 MNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 425 EMLGQGIVPSTGTVTSFI 442
M+ GIVPS T + I
Sbjct: 625 RMISAGIVPSIATWSVLI 642
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 75/174 (43%)
Query: 402 TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRA 461
T+ +I +V +L +M QG S S I G A+ ++ R
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 462 RKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQL 521
++ GC S+ Y +L L + M+ ++ +M+ G+ ++ Y ++ LC ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 522 ENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENA 575
+ A ++ E +KG CP + Y+ + + + V+ +L + + S NA
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 179/429 (41%), Gaps = 42/429 (9%)
Query: 145 ESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKK 204
+ AL + V + ++V + L + G A++ FF+W K+ + +YN+ ++ G
Sbjct: 632 QEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCG 691
Query: 205 KFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESL 264
K M + ++R +G + +T +I+ R AI+ F ++ G + +
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 265 NVLLQCLCKRS--HVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEA 320
L+ LC++ +V A F + G +P + + ++G K L++
Sbjct: 752 KCLITVLCEKKGRNVEEATRTFREMIRSGFVP-DRELVQDYLGCLCEVGNTKDAKSCLDS 810
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
+ + GF P + ++ L R G++E+AL + + +L+ Y +++ + GD
Sbjct: 811 LGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGD 869
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
L +A+ + P + YT LI F K +++ LE +M G+ PS T T+
Sbjct: 870 LQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTA 929
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
I S G A N + M+E G
Sbjct: 930 MICGYMSLGKVEEA-----------------------------------WNAFRNMEERG 954
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
S D + Y IN LC + E+A+ ++ E L KG PS + + ++ L K + A
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA- 1013
Query: 561 KLFLKIKAA 569
++ L+ K+A
Sbjct: 1014 RIALQKKSA 1022
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 175/389 (44%), Gaps = 37/389 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FFNW ++ + YN +L G+ + +D + +++ ++ G ++ T +I+
Sbjct: 175 FFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVY 234
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNV 295
+A+++ K + +F + GF D + N++++ LC A ++ + K I F +
Sbjct: 235 GKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGL 294
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMV-------EDGF---------------------- 326
TY ++ +K +V ++ I + MV D F
Sbjct: 295 RTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRE 354
Query: 327 ------TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
D F+ L++GL RA R+ DAL+I D ++++ + +++VY +IS ++ D
Sbjct: 355 LKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD-IMKRRKLDDSNVYGIIISGYLRQND 413
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+ +A++ + + + P + TYT+++ K ++ + +EM+ GI P + +T+
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
+ A ++ + G K + +Y + + L R + ++ I+ +M S
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVME 529
+++ ++I+ + G+ E L+ E
Sbjct: 534 IVIRDDIFSWVISSMEKNGEKEKIHLIKE 562
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 349 ALKIFDNLVEKD-YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
A++ F+ + +KD + +YN M+S +LD + + N CD DI T+T LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
S + KA+K+ L + ++M G I LC G A+ YK + G
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
L YK+LL +++ K ++ +I ++M S+ + + Y++ C G+++ A+ +
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALEL 351
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
+ E +K C + L L +N++ A ++
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 6/301 (1%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGKIPFN--VATYNTIIAGWSKIGQVCQMKKILEAMV 322
NVL +C K H+ A +FN VK K F+ V YNT+++ + + + +++ M
Sbjct: 160 NVLKRCF-KVPHL--AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEME 216
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
++G D T+ L+ G+A +I L +F+ + + + L+ + YN MI + G D
Sbjct: 217 KNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGD 276
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
A+++Y+ ++ + TY L+ K+ KV + D+M+ + +
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
+ C G A+ + + + + +++L+ L R + L I + M+
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL- 395
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
D VY II+G + A+ E G P Y+++ L + E+ L
Sbjct: 396 DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNL 455
Query: 563 F 563
F
Sbjct: 456 F 456
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 160/340 (47%), Gaps = 8/340 (2%)
Query: 172 EAMVIFFNWAIKQPM-IPKDIHSYNVILRALGK-KKFI---DFMLKMLRDLRTEGITVNL 226
+A + F WA KQP +P D Y V+ L + + F+ +M++D + G ++
Sbjct: 186 DAALSLFRWAKKQPWYLPSD-ECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHG-DLSF 243
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS-HVRAANSYFN 285
+ V L +A+++ A F +E G DT++ N L+ + +A Y +
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 286 AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR 345
K + +TY II +K G++ K+ + M E P S F SL+ +G+AGR
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
++ ++K++ + + +++ ++I ++ G LD A++ + + + P+ YT
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
+I + K+ K+ A+ + +M G +P+ T + +E G +AM IY AG
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
+ LS+Y LL L+ + I EM+ GYS D+
Sbjct: 484 LRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 142/303 (46%), Gaps = 7/303 (2%)
Query: 267 LLQCLCKRSHVRAANSYFNAVKGKIPFNVAT---YNTIIAGWSKIGQVCQMKKILEAMVE 323
+ Q L V AA S F K K P+ + + Y + G ++ ++ + E MV+
Sbjct: 175 ITQSLKIVKEVDAALSLFRWAK-KQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQ 233
Query: 324 DGFTPDCSTFDS---LLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
D + +F++ ++Q L +A ++E A F E ++T YN ++ F++ G
Sbjct: 234 DSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGL 293
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+A + Y + + D TY +I + K+ ++ A ++ +M + + PS +S
Sbjct: 294 PYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSS 353
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
++ + G +M +Y + G + S + + L+ ++ GK L +W+EM++SG
Sbjct: 354 LVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ + +Y II G+LE A+ V ++ GF P+ YS L S +V+ A
Sbjct: 414 FRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAM 473
Query: 561 KLF 563
K++
Sbjct: 474 KIY 476
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 132/284 (46%), Gaps = 10/284 (3%)
Query: 289 GKIPFNVATYNTIIAGWSKIGQV----CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
G + FN YN +I +K ++ C KK E+ G D T+++L+ G
Sbjct: 239 GDLSFN--AYNQVIQYLAKAEKLEVAFCCFKKAQES----GCKIDTQTYNNLMMLFLNKG 292
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
A +I++++ + D +L+ S Y +I + G LD A K ++ + P ++
Sbjct: 293 LPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFS 352
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA 464
L+ + KA ++ ++++ EM G G PS S I+ G A+ ++ +K+
Sbjct: 353 SLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 412
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G + + Y +++ ++ GK + + ++++M+++G+ Y ++ GQ+++A
Sbjct: 413 GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSA 472
Query: 525 VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+ + + G P Y L L V+ A K+ L++KA
Sbjct: 473 MKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 352 IFDNLVE-KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+FD L + +D+V S++ M+ + S GDL + Y ++I
Sbjct: 211 LFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLS-----------------FNAYNQVIQYL 253
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
KA K+ A + G T T + + + G P+ A IY+ K +
Sbjct: 254 AKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDG 313
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
S Y+L++ L++ G+ ++++M+E V+ +++ + G+L+ ++ V E
Sbjct: 314 STYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
G PS ++ L + + K++ A +L+ ++K + N
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A +K+A+++GCKI Y L+M G I+E M+++ D YE II
Sbjct: 262 AFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNE 573
L G+L+ A + ++ + PS ++S L + + + +++ + K++++++
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 574 NARRF 578
+A F
Sbjct: 382 SATMF 386
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 4/328 (1%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI-QIF 249
+++++ ++ A G+ + + + ++ G+ NL T + V D + +K + + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGK-IPFNVATYNTIIAGWSK 307
+ G D + N LL +C R + AA + F+ + + I +V +YNT++ K
Sbjct: 328 DEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
GQ+ +IL M P+ ++ +++ G +AGR ++AL +F + L+
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN ++S + VG +EA+ R + S D+ TY L+ + K K + ++ EM
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
+ ++P+ T ++ I+ G AM I++ + AG + + Y L+ L + G G
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGL 515
+++ +EM + G S ++ Y II+
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 155/376 (41%), Gaps = 16/376 (4%)
Query: 197 ILRALGKKK-------FIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
I+R LG + F +F +K R +G + S + L R +V A +IF
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQG-----KLASAMISTLGRYGKVTIAKRIF 256
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSK 307
G+G + + L+ + A S FN++K G P N+ TYN +I K
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRP-NLVTYNAVIDACGK 315
Query: 308 IG-QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
G + Q+ K + M +G PD TF+SLL R G E A +FD + + +
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN ++ G +D A + + P++ +Y+ +I F KA + +AL + EM
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
GI + + + G A+ I + G K + Y LL + GK
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ ++ EM+ ++ Y +I+G G + A+ + E G ++YS L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 547 YNKLLASNKVERAYKL 562
+ L + V A L
Sbjct: 556 IDALCKNGLVGSAVSL 571
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 1/270 (0%)
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
+ +I+ + G+V K+I E G+ F +L+ GR+G E+A+ +F+++ E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 359 KDYVLETSVYNAMISNFISVG-DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
YNA+I G + + K++ + N PD T+ L++ +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
A + DEM + I + + ++ +C G A I + ++ +Y ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
++ G+ LN++ EM+ G + D Y +++ +G+ E A+ ++ E G
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+ Y+ L K + K+F ++K
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 36/237 (15%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +D+ SYN +L A+ K +D ++L + + I N+ + S V DG +A R +A+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCK--RSH-------------VRAANSYFNAVKG-- 289
+FG G D S N LL K RS ++ +NA+ G
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 290 -------------------KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
+ N+ TY+T+I G+SK G + +I G D
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
+ +L+ L + G + A+ + D + ++ YN++I F +D + Y
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 174/390 (44%), Gaps = 18/390 (4%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRD-LRTEG------ITVNLETLSIVADGLVRAQR 241
K+ NV++ L + +D K+L + L+ E IT ++ + + L+ ++
Sbjct: 183 KNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK 242
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNT 300
+ I F + G ++ L + LCK + A + +K K P +N
Sbjct: 243 IIALISRFSS---HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK- 359
+++ + + +M ++ M E PD T L+ L ++ R+++AL++F+ + K
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 360 ----DYVLETSV-YNAMISNFISVGDLDEAIKY-YRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + S+ +N +I VG L EA + R L C P+ TY LI + +A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
K+ A E++ M I P+ TV + + +C + A++ + K G K ++ Y
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ + +E+M E+G S D ++Y +I+GLC + + +A+ V+E+
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
GF L Y+ L N E+ Y++
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 171/383 (44%), Gaps = 7/383 (1%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQP----MIPKDIHSYNVILRALGKKKFIDFM 210
++L ++ TL + EA+ +F K+ +I D +N ++ L K +
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 211 LKMLRDLRTEGITV-NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQ 269
++L ++ E V N T + + DG RA ++ A ++ +E + ++N ++
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 270 CLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
+C+ + A +F + K + NV TY T+I + V + E M+E G +P
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D + +L+ GL + R DA+++ + L E + L+ YN +I F + ++ +
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ PD TY LIS F K + M+++M G+ P+ T + I+ CS
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSV 629
Query: 449 GPPHAAMMIYK-RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A+ ++K + + Y +L+ S+ G G L++ EEM+ ++E
Sbjct: 630 GELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVET 689
Query: 508 YEYIINGLCNIGQLENAVLVMEE 530
Y + L Q E + +M+E
Sbjct: 690 YNALFKCLNEKTQGETLLKLMDE 712
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 187/465 (40%), Gaps = 48/465 (10%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
++S + N+ V +VV L R L +A + K+ + P + + +++L + K
Sbjct: 178 LDSNMKNSQVR---NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK 234
Query: 204 KKFI--DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN---------- 251
++ + + ++ ++ + G++ N L+ L + R A I +
Sbjct: 235 ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEA 294
Query: 252 -------------------------TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
+E D +L +L+ LCK V A F
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 287 VKGK-------IPFNVATYNTIIAGWSKIGQVCQMKKILEAM-VEDGFTPDCSTFDSLLQ 338
++GK I + +NT+I G K+G++ + +++L M +E+ P+ T++ L+
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
G RAG++E A ++ + E + N ++ L+ A+ ++ +
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
++ TY LI A V A+ ++ML G P + I LC H A+ +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 459 KRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
++ ++ G + L AY +L+ + + +M++ G D Y +I+
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
E+ +ME+ G P+ Y + + + +++ A KLF
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 125/260 (48%), Gaps = 4/260 (1%)
Query: 171 GEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLS 230
G M + F +++ + ++ +Y ++ A ++ + + G + + +
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-- 288
+ GL + +R + AI++ +E GF D + N+L+ C +++ ++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
GK P ++ TYNT+I+ + K +++++E M EDG P +T+ +++ G +++
Sbjct: 576 GKKPDSI-TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDE 634
Query: 349 ALKIFDNL-VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
ALK+F ++ + T +YN +I+ F +G+ +A+ + P+++TY L
Sbjct: 635 ALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 408 SAFIKARKVADALEMLDEML 427
+ + L+++DEM+
Sbjct: 695 KCLNEKTQGETLLKLMDEMV 714
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 7/262 (2%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G +P+ + L + R A I +L++ LE +NA++S D+
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ----GIVPSTGTV-- 438
+ PD+ T LI+ K+R+V +ALE+ ++M G+ G V ++
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 439 TSFIEPLCSFGPPHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
+ I+ LC G A + R + + C + Y L+ R GK + M+
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
E ++ I+ G+C L AV+ + +G + + Y L + + + VE
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 558 RAYKLFLKIKAARSNENARRFW 579
+A + K+ A + +A+ ++
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYY 515
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 182/402 (45%), Gaps = 24/402 (5%)
Query: 167 GNLG--GEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLR-TEGIT 223
GN G E++ +F +KQ I + ++N +L L K+ + ++R T G+T
Sbjct: 149 GNAGLFQESVKLF--QTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
+ T + + +G + V +A +IF + E + D + N ++ LC+ V+ A++
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 284 FNAVKGK---IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGL 340
+ + K + NV +Y T++ G+ ++ + + M+ G P+ T+++L++GL
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 341 GRAGR---IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
A R I+D L I N + + +N +I G LD A+K ++ +L+
Sbjct: 327 SEAHRYDEIKDIL-IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV-------PSTGTVTSFIEPLCSFGP 450
PD +Y+ LI + A + +E+ + ++ P E LC+ G
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A ++++ K G + +YK L+ R GK + M + D+E YE
Sbjct: 446 TKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYEL 504
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
+I+GL IG+ L+ ++L + S L + ++ +LA
Sbjct: 505 LIDGLLKIGE----ALLAHDTLQRMLRSSYLPVATTFHSVLA 542
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 22/353 (6%)
Query: 223 TVNLETLSIV---ADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA 279
T L+TL ++ ADGL + F GF +S ++L+ L + ++
Sbjct: 69 TTVLQTLRLIKVPADGL----------RFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNV 118
Query: 280 ANSYFNAVK----GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDS 335
A ++ +++ G + +N++I + G + K+ + M + G +P TF+S
Sbjct: 119 ARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETS-VYNAMISNFISVGDLDEAIKYYRCLLSN 394
LL L + GR A +FD + V S +N +I+ F +DEA + ++ +
Sbjct: 179 LLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELY 238
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG--IVPSTGTVTSFIEPLCSFGPPH 452
+C+PD+ TY +I +A KV A +L ML + + P+ + T+ + C
Sbjct: 239 HCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEID 298
Query: 453 AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE--SGYSSDMEVYEY 510
A++++ G K + Y L+ LS + + +I + + ++ D +
Sbjct: 299 EAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNI 358
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+I C+ G L+ A+ V +E L+ P YS L L N+ +RA LF
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 133/347 (38%), Gaps = 46/347 (13%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D ++N++++A +D +K+ +++ + + + S++ L +A +F
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Query: 250 GN--TEEFGFGCD-----TESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTII 302
+E G D + N + + LC + A F + + + +Y T+I
Sbjct: 412 NELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLI 471
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G + G+ ++L M+ F PD T++ L+ GL + G A ++ Y+
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI----------SAFIK 412
+ ++++++ +E+ +L +ID T+++ AF+
Sbjct: 532 PVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLI 591
Query: 413 ARKVAD--ALEMLDEMLG--------------------QGIVPSTGTVTSFIEPLCSFGP 450
R + D L ++E+LG + + T + IE LC
Sbjct: 592 VRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKR 651
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
A +Y + G LS + +L L GK WEE+Q
Sbjct: 652 HSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGK-------WEELQ 691
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 7/329 (2%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF W+ +Q ++SY+++++ + M +++ ++ +G T +++
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAAN-SYFNAVKGKIPFNV 295
A +A+ F ++ F + S N +L L + Y ++ +V
Sbjct: 195 GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
TYN ++ ++G++ + ++ + M DGF+PD T++ LL LG+ + AL ++
Sbjct: 255 LTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH 314
Query: 356 LVEKDYVLETSV--YNAMISNFISVGDLDEAIKYY-RCLLSNNCDPDIDTYTKLISAFIK 412
+ K+ ++ SV Y +I G+L EA KY+ ++ C PD+ YT +I+ ++
Sbjct: 315 M--KEVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+ ++ A EM EM +G +P+ T S I LC G A + K GC +
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
Y L+ L + GK + EM + G+
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 123/280 (43%)
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V +Y+ ++ +++ G+ M ++++ MV+DGF TF+ L+ G AG + A+ F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+Y YNA++++ + V Y+ +L + PD+ TY L+ +
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
K+ + DEM G P + T + L P AA+ ++ G S+ Y
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
L+ LSR G +EM ++G D+ Y +I G G+L+ A + E K
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
G P+ Y+ + L + + A L ++++ N N
Sbjct: 389 GQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 184/427 (43%), Gaps = 42/427 (9%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
++DV K+ G+L ++V + + Q + P ++ +Y ++++ L + I M
Sbjct: 362 TIDVYVKS---GDLATASVV--YKRMLCQGISP-NVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS 275
+ G+ ++ T S + DG + + ++ + + G+ D VL+ L K+
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 276 HVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
+ A + + G+ I NV +N++I GW ++ + + K+ M G PD +TF
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 335 SLLQGLGRAGRIEDAL-----------------------------------KIFDNLVEK 359
++++ GR+E+AL ++FD +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ +V N +I +++A K++ L+ +PDI TY +I + R++ +A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+ + + P+T T+T I LC A+ ++ + G K + Y L+
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
S+ ++EEMQE G S + Y II+GLC G+++ A + +++ P
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 540 RLIYSKL 546
+ Y+ L
Sbjct: 776 VVAYAIL 782
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 162/372 (43%), Gaps = 5/372 (1%)
Query: 180 WAIKQPMI----PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+A+ + MI P D+ Y V++ L K+ + ++ + + I +N+ + + DG
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAA-NSYFNAVKGKIPFN 294
R R +A+++F +G D + +++ + A +F K + +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
Y T+I + K + ++ + M + + D + + ++ L + RIEDA K F+
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
NL+E + YN MI + S+ LDEA + + L P+ T T LI K
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ A+ M M +G P+ T ++ + +++ ++ G S+ +Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
+++ L + G+ NI+ + ++ D+ Y +I G C +G+L A L+ E L
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 535 GFCPSRLIYSKL 546
G P L+ L
Sbjct: 806 GVKPDDLLQRAL 817
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 170/384 (44%), Gaps = 7/384 (1%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN-LETLSIVADGLVRAQRVYK 244
+IP+D Y ++ +G + +D + L GI + + V D L V K
Sbjct: 178 VIPQD-SVYRMLNSLIGSDR-VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTK 235
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTII 302
A+ E GF S N +L+ L + A+ + V G P NV T+ T+I
Sbjct: 236 ALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAP-NVVTFCTLI 293
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G+ K G++ + + + M + G PD + +L+ G +AG + K+F + K
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
L+ V+++ I ++ GDL A Y+ +L P++ TYT LI + ++ +A M
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
++L +G+ PS T +S I+ C G + +Y+ K G + Y +L+ LS+
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
G + +M ++ V+ +I+G C + + + A+ V G P
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 543 YSKLYNKLLASNKVERAYKLFLKI 566
++ + + ++E A LF ++
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRM 557
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 177/406 (43%), Gaps = 3/406 (0%)
Query: 181 AIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQ 240
++Q I D+ +Y+ ++ K + K+ +G+ +++ S D V++
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATY 298
+ A ++ G + + +L++ LC+ + A + + +G P ++ TY
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVTY 429
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
+++I G+ K G + + E M++ G+ PD + L+ GL + G + A++ ++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+ L V+N++I + + DEA+K +R + PD+ T+T ++ I ++ +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM 478
AL + M G+ P + I+ C P + ++ ++ ++ +++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 479 RLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
L + + + + E D+ Y +I G C++ +L+ A + E F P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 539 SRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFWRANGW 584
+ + + L + L +N ++ A ++F + S NA + W
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 1/339 (0%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
P D+ +YN ++R + + ++ +D G + T +++ + + R +AI+
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWS 306
+ + G D + N L+ C+R ++ S + + N TYNT++
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
++++IL M + + P T++ L+ GL +A + A+ F ++E+ + +
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN ++ G +D+AI+ L + C P + TY +I K + ALE+ +M
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
L GI P T S I C A + K G I S Y+L++ L + +
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
M + + E M G D +Y I+ G+ +G AV
Sbjct: 506 EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 3/306 (0%)
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKI 317
D E+ N +L LC + A A ++P + + + ++ G ++I Q+ + I
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVP-HFPSCSNLVRGLARIDQLDKAMCI 161
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
L MV G PD T++ ++ L + G I AL + +++ + YN +I
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
G+ ++AI++++ L N C P + TYT L+ + A A+E+L++M +G P T
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ 497
S + C G + + G +++ Y LL L + I M
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
++ Y + Y +INGLC L A+ + L + P + Y+ + + V+
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 558 RAYKLF 563
A +L
Sbjct: 402 DAIELL 407
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 181/459 (39%), Gaps = 49/459 (10%)
Query: 114 EESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEA 173
+E + D+F L V + +N + S + GV +L K + +
Sbjct: 38 QEIGLKKDVFFRCHGLLSSVCIDNVNDHAERSSEFHHYGVGTNLRARVKPMKQ------- 90
Query: 174 MVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVA 233
F + P+ D + N IL L + K++ + + + S +
Sbjct: 91 ----FGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLV 146
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKI 291
GL R ++ KA+ I G DT + N+++ LCK+ H+R A ++ G
Sbjct: 147 RGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSP 206
Query: 292 PFNVATYNTIIAGWSKIGQ-----------------------------VCQ------MKK 316
P +V TYNT+I G VC+ +
Sbjct: 207 P-DVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
+LE M +G PD T++SL+ R G +E+ + +++ L T YN ++ +
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 377 SVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
S DE + + + P + TY LI+ KAR ++ A++ +ML Q +P
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 437 TVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
T + + + G A+ + + C L Y ++ L++ G L ++ +M
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++G D +I G C +E A V++E+ ++G
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 172/415 (41%), Gaps = 8/415 (1%)
Query: 153 VDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLK 212
V+LS +V K L+R + + WA +Y++ + LGK K D M +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+ +R + + V L T++ + A +A+ IF EFG +TES+N+LL LC
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 273 KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
K V A +K I N T+N I GW K +V + ++ M GF P +
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ ++++ + ++ + + Y ++S+ + + +EA++ +
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLD-EMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ C PD Y LI +A ++ +A + EM G+ +T T S I C
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 452 HAAMMIYKRARKAG-CKISLSAYKLLLMRLSRFG---KCGMLLNIWEEMQESGYSSDMEV 507
A+ + K + C + Y+ LL + G + G LL E + + S D
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK--EMVTKHHLSLDEST 439
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
Y ++I LC E A + EE + + P L ++ N E A ++
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 172/415 (41%), Gaps = 8/415 (1%)
Query: 153 VDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLK 212
V+LS +V K L+R + + WA +Y++ + LGK K D M +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+ +R + + V L T++ + A +A+ IF EFG +TES+N+LL LC
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 273 KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
K V A +K I N T+N I GW K +V + ++ M GF P +
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ ++++ + ++ + + Y ++S+ + + +EA++ +
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLD-EMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ C PD Y LI +A ++ +A + EM G+ +T T S I C
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 452 HAAMMIYKRARKAG-CKISLSAYKLLLMRLSRFG---KCGMLLNIWEEMQESGYSSDMEV 507
A+ + K + C + Y+ LL + G + G LL E + + S D
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLK--EMVTKHHLSLDEST 439
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
Y ++I LC E A + EE + + P L ++ N E A ++
Sbjct: 440 YTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+KF+ KM+R +G ++ +IV L ++ + KA ++ E G +
Sbjct: 185 EKFLLSFEKMIR----KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
N +L K + + + +K + I F+ TYN +I G+SK G++ + ++ M
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
GF +F+ L++G + G +DA + D ++ TS YN I G +D
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
+A R LLS+ PD+ +Y L+ +IK K +A + D++ I PS T + I
Sbjct: 361 DA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG-- 500
+ LC G A + + + Y L+ + G M +++EM G
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 501 ----------------------------------YSSDMEVYEYIINGLCNIGQLENAVL 526
++ D+ +Y I+GLC +G L A+
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ G P + Y+ + L + + + A L+
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 183/422 (43%), Gaps = 16/422 (3%)
Query: 158 DVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL 217
++V K L + +A ++ I+ ++P I ++N +L + K ++ + K+ ++
Sbjct: 207 NIVLKVLRDSRMMNKASAVY-ETMIEHGIMPTVI-TFNTMLDSCFKAGDLERVDKIWLEM 264
Query: 218 RTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV 277
+ I + T +I+ +G + ++ +A + G+ GF S N L++ CK+
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 278 RAA----NSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
A + NA G P +TYN I G++ +++L +M PD ++
Sbjct: 325 DDAWGVTDEMLNA--GIYP-TTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSY 377
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
++L+ G + G+ +A +FD+L D YN +I G+L+ A + + +
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
PD+ TYT L+ F+K ++ A E+ DEML +GI P T+ G
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 454 AMMIYKRARKAGCKI-SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
A +++ L+ Y + + L + G + ++ G D Y +I
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 513 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA--YKLFLKIKAAR 570
G GQ + A + +E L K PS + Y L + ++E+A Y +K + R
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 571 SN 572
N
Sbjct: 618 PN 619
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 159/377 (42%), Gaps = 10/377 (2%)
Query: 180 WAIKQPMIPKDIH----SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
W + M+ I+ +YN+ + AL ID ++L + + + + + G
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV----SYNTLMHG 383
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-N 294
++ + +A +F + + N L+ LC+ ++ A + ++ F +
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V TY T++ G+ K G + ++ + M+ G PD + + G R G + A ++ +
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 355 NLVEKDY-VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+V D+ + ++YN I VG+L +AI++ R + PD TYT +I +++
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A + DEML + + PS T I G A +K G + ++ +
Sbjct: 564 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
LL + + G +M+E G + Y +I+ C+ + E V + +E L
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 534 KGFCPSRLIYSKLYNKL 550
K P + L+ L
Sbjct: 684 KEIEPDGYTHRALFKHL 700
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 160/374 (42%), Gaps = 6/374 (1%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
+S+N ++ K+ D + ++ GI T +I L R+ A ++ +
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKIGQ 310
D S N L+ K A+ F+ ++ G I ++ TYNT+I G + G
Sbjct: 369 MA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ +++ E M PD T+ +L++G + G + A +++D ++ K + Y
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 371 MISNFISVGDLDEAIKYYRCLL-SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+ +GD D+A + + ++ +++ PD+ Y I K + A+E ++
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G+VP T T+ I G A +Y + S+ Y +L+ ++ G+
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
EM++ G ++ + ++ G+C G ++ A + + +G P++ Y+ L +K
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 550 LLASNKVERAYKLF 563
K E KL+
Sbjct: 665 NCDFEKWEEVVKLY 678
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 199/472 (42%), Gaps = 28/472 (5%)
Query: 135 LQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIK-QPMIPKDIHS 193
L K +S S AN+ + +S VV + L R ++ + FF W +P +
Sbjct: 36 LSKTLSQSGTRSLDANS-IPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATA 94
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y+ I R + + + + +L ++ +G+ ++ I+ D L+R+ + A+ + E
Sbjct: 95 YSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYME 154
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVR-----------AANSYFNAVKGKI------PFNVA 296
E G + + +L L K+ +R A++++ + G++ P VA
Sbjct: 155 ELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVA 214
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVE-DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
N ++ G + + K++ E + F D +++ + G G G ++ AL +F
Sbjct: 215 V-NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 356 LVEKDYVLETS------VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+ E+ V +S YN++I G +A+ + L + +PD TY LI
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQG 333
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
K+ ++ DA+ + EM G VP T ++ A ++++ + G + S
Sbjct: 334 CCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRAS 393
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
Y +L+ L R G+ ++ ++++ G D + + LC G+LE AV ++E
Sbjct: 394 CWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVE 453
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFWRA 581
E +GF + S L + + KL I+ N R W A
Sbjct: 454 EMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR-WNA 504
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IP 292
GL R QRV F D + +N L + + A F G
Sbjct: 578 GLARGQRVEAKPDSF----------DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTD 627
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
TYN++++ + K G + +L+ M E+ D +T++ ++QGLG+ GR + A +
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D L ++ L+ +YN +I+ LDEA + + + SN +PD+ +Y +I K
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVT 439
A K+ +A + L ML G +P+ T T
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVTDT 774
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 147/391 (37%), Gaps = 57/391 (14%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+YN+++ L + + + DL+ +G V+ T SIV L R ++ A+++
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 253 EEFGFGCDTESLNVLLQCLCKRS----------HVRAANSYFNAVKGKIPFNVATYNTII 302
E GF D +++ LL K+ H+R N N ++ +N ++
Sbjct: 456 ETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR----WNAGVEASLK 511
Query: 303 AGWSKIGQVCQM----KKILEAM-----------------VEDGFTPDCSTFDSL----- 336
SK M L+ M +ED D L
Sbjct: 512 RPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRN 571
Query: 337 ----LQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
L GL R R+E FD + N +S ++S GDL A K + +
Sbjct: 572 QPKPLFGLARGQRVEAKPDSFD----------VDMMNTFLSIYLSKGDLSLACKLFE-IF 620
Query: 393 SNNCDPDIDTYT--KLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ D+ +YT ++S+F+K A +LD+M T I+ L G
Sbjct: 621 NGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGR 680
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A + R K G + + Y L+ L + + +++ M+ +G + D+ Y
Sbjct: 681 ADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNT 740
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+I G+L+ A ++ L G P+ +
Sbjct: 741 MIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 149/371 (40%), Gaps = 35/371 (9%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML 214
L+ + V RG L E ++ F ++ I DI +YN +L A + D +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFA-EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVF 270
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
R + GI +L T S + + + +R+ K + G
Sbjct: 271 RTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM---------------------- 308
Query: 275 SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
A G +P ++ +YN ++ ++K G + + + M G TP+ +T+
Sbjct: 309 -----------ASGGSLP-DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
LL G++GR +D ++F + + + + YN +I F G E + + ++
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
N +PD++TY +I A K DA ++L M IVPS+ T IE A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
++ + + G S+ + LL +R G I + +SG + + + I
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 515 LCNIGQLENAV 525
G+ E AV
Sbjct: 537 YKQGGKFEEAV 547
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 160/409 (39%), Gaps = 47/409 (11%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI SYNV+L A K I + + ++ G T N T S++ + ++ R Q+F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKI 308
+ D + N+L++ + + + + F + V+ I ++ TY II K
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 309 GQVCQMKKILEAMV-----------------------------------EDGFTPDCSTF 333
G +KIL+ M E G P TF
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
SLL R G ++++ I LV+ +NA I + G +EA+K Y +
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH- 452
+ CDPD T ++S + AR V + E +EM I+PS + + L +G
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPS---IMCYCMMLAVYGKTER 612
Query: 453 ---AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
++ + I +++ ++ + +++ G + Y
Sbjct: 613 WDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYN 672
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
+++ L +GQ E A V+ E+ +G P ++ K NKL+ S V R
Sbjct: 673 ALLDALWWLGQKERAARVLNEATKRGLFPE--LFRK--NKLVWSVDVHR 717
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/405 (17%), Positives = 160/405 (39%), Gaps = 39/405 (9%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F + +Q + H Y +++ LG++ +D L++ ++ ++G++ ++ + + + +
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAAN--SYFNAVKGK-IPF 293
R R ++++ + + N ++ C R + F ++ + I
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ TYNT+++ + G + + + M + G PD +T+ L++ G+ R+E +
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + + + YN ++ + G + EA+ + + + C P+ +TY+ L++ F ++
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ D ++ EM P T Y
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAAT-----------------------------------Y 390
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+L+ G ++ ++ +M E DME YE II G E+A +++
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
PS Y+ + + E A F + SN + F
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 11/254 (4%)
Query: 322 VEDG-FTPDCSTFDSLLQGLGRAGRIEDALKIFDN-LVEKDYVLETSVYNAMISNFISVG 379
VE G ++ D + + L L G I L IF N L D+ L + F G
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFAL-------VFKEFAGRG 119
Query: 380 DLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
D +++ ++ + C P+ YT +IS + + LE+ DEM QG+ S +
Sbjct: 120 DWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSY 179
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG-KCGMLLNIWEEMQ 497
T+ I G ++ + R + S+ Y ++ +R G LL ++ EM+
Sbjct: 180 TALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G D+ Y +++ G + A +V G P YS L ++E
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 558 RAYKLFLKIKAARS 571
+ L ++ + S
Sbjct: 300 KVCDLLGEMASGGS 313
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 1/305 (0%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
K+ ++R GI ++ + + R + +A +F E G + + L+ +
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 272 CKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
CK + AA N ++ K + +NT+I G+ + G V + I + M + GF D
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T +++ R R ++A + ++E L T Y +I + G+++EA + +
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ S P+ TY +I A+ K K+ +A ++ M G+ P + T TS I C
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
AM ++ G + Y +++ LS+ GK +++EM+ GY+ D +VY
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 511 IINGL 515
+I +
Sbjct: 615 LIGSM 619
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 159/373 (42%), Gaps = 24/373 (6%)
Query: 205 KFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESL 264
+ D+M+K +G++++ + + + +R+ ++IF + G SL
Sbjct: 175 RVFDYMVK-------KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 265 NVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
++++ LC+R V + +VKG P TYNTII + K ++ +L+ M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKP-EAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
+DG + T+ L++ + G++ DA K+FD + E+ + VY ++IS G++
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
A + L P TY LI K ++ A +++EM +G+ + + I
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 443 EPLCSFGPPHAAMMIYKRARKAG-------CKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
+ C G A MIY + G C S + RL R+ + L
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN----RLKRYDEAKQWLF---R 459
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
M E G Y +I+ C G +E A + E KG P+ + Y+ + K
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 556 VERAYKLFLKIKA 568
++ A KL ++A
Sbjct: 520 IKEARKLRANMEA 532
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 175/426 (41%), Gaps = 37/426 (8%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F++ +K+ + D S V L A K++ ID L++ R + G+ + + +L+IV +GL
Sbjct: 177 FDYMVKKGL-SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVA 296
R V K+ ++ G + + N ++ K+ +K + +N
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAM----------------------------------- 321
TY ++ K G++ +K+ + M
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
E G +P T+ +L+ G+ + G + A + + + K + V+N +I + G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
DEA Y + D+ T + S F + ++ +A + L M+ G+ ST + T+
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I+ C G A ++ G + + Y +++ + GK + M+ +G
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
D Y +I+G C ++ A+ + E KG + + Y+ + + L + K + A+
Sbjct: 536 DPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFG 595
Query: 562 LFLKIK 567
L+ ++K
Sbjct: 596 LYDEMK 601
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 36/220 (16%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+N ++ +K +D + + +G ++ T + +A R +R +A Q
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVC 312
E G T S L+ CK +V A F + K + N TYN +I + K G++
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQG--------------------------------- 339
+ +K+ M +G PD T+ SL+ G
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 340 --LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
L +AG+ ++A ++D + K Y ++ VY A+I + S
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT-PDCSTFDSLLQGLGRAGRIEDALKI 352
N +N ++ K G + ++E M G + P+ T+ +L+ L R ++A+++
Sbjct: 195 NTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 353 FDNLVEKDYVLETSV-YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
F++++ K+ + V +N MI+ F G+++ A K + N C+P++ Y+ L++ F
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
K K+ +A + DE+ G+ T T+ + C G AM + + + C+
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 472 AYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEES 531
Y ++L LS G+ L + ++ G + Y I+N LC G+LE AV +
Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
Query: 532 LHKGFCPSRLIYSKLYNKLLASNKVERAYKL---FLKI 566
+G P +++L +L S E ++ FL+I
Sbjct: 435 SERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI 472
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 3/312 (0%)
Query: 255 FGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVC 312
G +T N+L++ CK + A +K G N TY+T++ +
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 313 QMKKILEAMV-EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ ++ E M+ ++G +PD TF+ ++ G RAG +E A KI D + + Y+A+
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
++ F VG + EA + + + D YT L++ F + + +A+++L EM
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
T T + L S G A+ + + G ++ +Y+++L L G+ +
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
M E G + ++ LC G E V V+ L G P + + +
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 552 ASNKVERAYKLF 563
K+ ++L
Sbjct: 490 KERKLVHVFELL 501
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 117/274 (42%), Gaps = 2/274 (0%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML 214
++ + L+ + EA+ +F + K+ + P + ++NV++ + ++ K+L
Sbjct: 233 ITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV-TFNVMINGFCRAGEVERAKKIL 291
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
++ G N+ S + +G + ++ +A Q F ++ G DT L+ C C+
Sbjct: 292 DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 275 SHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
A +K + + TYN I+ G S G+ + ++L+ +G + ++
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
+L L G +E A+K + E+ + +N ++ G + ++ L
Sbjct: 412 RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLR 471
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
P ++ ++ + K RK+ E+LD ++
Sbjct: 472 IGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 160/331 (48%), Gaps = 17/331 (5%)
Query: 155 LSLDVVA-----KTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRAL---GKKKF 206
L+L+VV + L +G + +A+ +F + ++ P + ++Y+++L L G+
Sbjct: 301 LTLNVVGYNTLMQVLAKGKMVDKAIQVF-SRMVETGCRPNE-YTYSLLLNLLVAEGQLVR 358
Query: 207 IDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNV 266
+D ++++ + T+GI S + L + V +A ++F + F + +S
Sbjct: 359 LDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 267 LLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG 325
+L+ LC A + + K + + YNT+ + K+ Q+ + + E M +DG
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
+PD T++ L+ GR G +++A+ IF+ L D + YN++I+ GD+DEA
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
++ + +PD+ TY+ L+ F K +V A + +EML +G P+ T ++ L
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
G A+ +Y + ++ G Y +L
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 166/365 (45%), Gaps = 2/365 (0%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K+ +D ++Y +++R +G+ D + + ++ TEG+T+N+ + + L + +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTI 301
V KAIQ+F E G + + ++LL L + + K + + +Y +
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY--L 378
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
+ SK+G V + ++ M + ++ S+L+ L AG+ +A+++ + EK
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
V +T +YN + S + + + + + PDI TY LI++F + +V +A+
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+ +E+ P + S I L G A + +K ++ G + Y L+
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ + M +++EEM G ++ Y +++ L G+ AV + + +G P +
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 542 IYSKL 546
Y+ L
Sbjct: 619 TYTVL 623
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 83/407 (20%)
Query: 246 IQIFGNTEE----------FGFGCDTESLNVLLQC-LCKRSHVRAANSYFNAVKGKIPFN 294
I FGNTE+ + ++ + LLQ L R + +A + Y +G +
Sbjct: 178 IGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD 237
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
+ YN ++ +K + CQ + E M + D T+ +++ +GR G+ ++A+ +F+
Sbjct: 238 IFAYNMLLDALAKDEKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI--- 411
++ + L YN ++ +D+AI+ + ++ C P+ TY+ L++ +
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 412 KARKVADALEMLDEMLGQGI--------------------------VPSTG---TVTSFI 442
+ ++ +E+ + QGI P G + S +
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 443 EPLCSFGPPHAA----------------MM-------------------IYKRARKAGCK 467
E LC G A MM ++++ +K G
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ Y +L+ R G+ +NI+EE++ S D+ Y +IN L G ++ A +
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSN 572
+E KG P + YS L + +VE AY LF + +K + N
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 165/382 (43%), Gaps = 41/382 (10%)
Query: 188 PKDIHSYNVILRA-LGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
P D+ ++N+++ A ++K I M+ +L + G ++ T++ V + L RV +A+
Sbjct: 246 PNDV-TFNILISAYCNEQKLIQSMV-LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAG 304
++ E G D + N L++ C +R A +F + KG +P NV TYN +IAG
Sbjct: 304 EVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLP-NVETYNLLIAG 362
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ +G + M D + +TF++L++GL GR +D LKI + + + D
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD---- 418
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+V+ A I D Y +I F K + DALE L
Sbjct: 419 -TVHGARI----------------------------DPYNCVIYGFYKENRWEDALEFLL 449
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+M + + P + + LC G Y + G S+ L+ R S+ G
Sbjct: 450 KM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHG 507
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
K L + +M GY + +I G C ++ N + +E+ +G P Y+
Sbjct: 508 KIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYN 567
Query: 545 KLYNKLLASNKVERAYKLFLKI 566
L +L +++A+ LF ++
Sbjct: 568 PLLEELCVKGDIQKAWLLFSRM 589
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 43/351 (12%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTE-GITVNLETLSIVADGL 236
F WA P +Y + L + D + ++L ++ G+ + + G
Sbjct: 63 FRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGF 122
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFN 294
RA+ + + I + +FG + N +L L K + A +F + I +
Sbjct: 123 GRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGD 181
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V TY ++ G S ++ K+L+ M G P+ +++LL L + G++ A
Sbjct: 182 VYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA----- 236
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
R L+S +P+ T+ LISA+ +
Sbjct: 237 ----------------------------------RSLMSEMKEPNDVTFNILISAYCNEQ 262
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
K+ ++ +L++ G VP TVT +E LC+ G A+ + +R G K+ + A
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
L+ GK + + EM+ GY ++E Y +I G C++G L++A+
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 161/381 (42%), Gaps = 13/381 (3%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKML-RDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
I + +N IL L K+ ID + R + GI ++ T I+ GL R+
Sbjct: 143 IKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDG 201
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
++ + G + N LL LCK V A S + +K N T+N +I+ +
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP---NDVTFNILISAY 258
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
++ Q +LE GF PD T +++ L GR+ +AL++ + + K ++
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
N ++ + ++G + A +++ + P+++TY LI+ + + AL+ ++
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKA----GCKISLSAYKLLLMRLS 481
M I + T + I L G + I + + + G +I Y ++
Sbjct: 379 MKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI--DPYNCVIYGFY 436
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+ + L +M++ + ++ I LC G +++ ++ + +G PS +
Sbjct: 437 KENRWEDALEFLLKMEKLFPRAVDRSFKLI--SLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 542 IYSKLYNKLLASNKVERAYKL 562
+ L ++ K+E + +L
Sbjct: 495 VSHCLIHRYSQHGKIEESLEL 515
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 142/330 (43%), Gaps = 38/330 (11%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ + ++ L + + L++L + ++G V++ + + G ++ A + F
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKI 308
E G+ + E+ N+L+ C + +A FN +K I +N AT+NT+I G S
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDS---LLQGLGRAGRIEDAL-------KIFDNLVE 358
G+ KILE M++D T + D ++ G + R EDAL K+F V+
Sbjct: 402 GRTDDGLKILE-MMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 359 KDY--------------------------VLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ + V V + +I + G ++E+++ ++
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
+ P T+ +I F K KV + ++ +++M +G VP T + +E LC G
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 453 AAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
A +++ R + S + L+ LS+
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLMFCLSQ 610
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 125/292 (42%), Gaps = 8/292 (2%)
Query: 157 LDVVA-KTLYRGNLGGEAMVI---FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLK 212
+DVVA TL +G M + FF ++ +P ++ +YN+++ +D L
Sbjct: 316 VDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLP-NVETYNLLIAGYCDVGMLDSALD 374
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG--FGCDTESLNVLLQC 270
D++T+ I N T + + GL R ++I ++ G + N ++
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYG 434
Query: 271 LCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
K + A + ++ P V +I+ K G + +K + M+ +G P
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEK-GGMDDLKTAYDQMIGEGGVPSI 493
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
L+ + G+IE++L++ +++V + Y+ +S +NA+I F + IK+
Sbjct: 494 IVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVED 553
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
+ C PD ++Y L+ + A + M+ + IVP +S +
Sbjct: 554 MAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 108/250 (43%), Gaps = 18/250 (7%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G PD + F ++++G GRA I+ + + D + + V+N+++ + D+D A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIA 165
Query: 385 IKYY-RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
+++ R ++++ D+ TY L+ ++ D ++L M G+ P+ + +
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 444 PLC---SFGPPHAAMMIYKRARKAGCKISLSAY---KLLLMRLSRFGKCGMLLNIWEEMQ 497
LC G + M K I +SAY + L+ + KC L
Sbjct: 226 ALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL-------- 277
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVE 557
G+ D+ ++ LCN G++ A+ V+E KG + + L A K+
Sbjct: 278 --GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 558 RAYKLFLKIK 567
A + F++++
Sbjct: 336 VAQRFFIEME 345
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 169/376 (44%), Gaps = 14/376 (3%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
E + FF W + +I D ++ +++ LG+ ++ +L D+ +G+ + + +
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVV 190
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGK 290
+ + +A V ++++IF ++ G +S N L + + +R A YFN V
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
+ TYN ++ G+ ++ + E M G +PD +TF++++ G R ++++A
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
K+F + Y MI +++V +D+ ++ + + S+ +P+ TY+ L+
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS---FGPPHAAMMIYKRARKAGCK 467
A K+ +A +L M+ + I P ++ F++ L S G AA + K
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSI--FLKLLVSQSKAGDMAAATEVLKAMATLNVP 428
Query: 468 ISLSAYKLLL---MRLSRFGKCGMLLNIWEEMQ-----ESGYSSDMEVYEYIINGLCNIG 519
Y +L+ + S + + LL+ E + + + Y II LCN G
Sbjct: 429 AEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNG 488
Query: 520 QLENAVLVMEESLHKG 535
Q A ++ + + +G
Sbjct: 489 QTAKAEVLFRQLMKRG 504
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 198/476 (41%), Gaps = 55/476 (11%)
Query: 135 LQKLNGKSAIESALANTGVDLSLD---VVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDI 191
+ KLN I + GV D V+ ++ + + E++ IF +K + + I
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF--QKMKDLGVERTI 220
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
SYN + + + ++ + + +EG+ T +++ G + R+ A++ F +
Sbjct: 221 KSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFED 280
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQ 310
+ G D + N ++ C+ + A F +KG KI +V +Y T+I G+ + +
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV-LETSVYN 369
V +I E M G P+ +T+ +LL GL AG++ +A I N++ K + S++
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
++ + GD+ A + + + + N + Y LI KA A+++LD ++ +
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 430 GIV----------PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS---------- 469
I+ PS IE LC+ G A +++++ K G +
Sbjct: 461 EIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGH 518
Query: 470 ------------------------LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
+AY+LL+ G+ G + M E G+ D
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHK--GFCPSRLIYSKLYNKLLASNKVERA 559
++ +I L G+++ A VM + K G + + +K+ LL VE A
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 123/268 (45%), Gaps = 7/268 (2%)
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
G I + T+ +I ++ ++ + IL M E G D F L++ G+AG +++
Sbjct: 144 GLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQE 203
Query: 349 ALKIFDNLVEKDYVLETSV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
++KIF + KD +E ++ YN++ + G A +Y+ ++S +P TY +
Sbjct: 204 SVKIFQKM--KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLM 261
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ F + ++ AL ++M +GI P T + I C F A ++ +
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
S+ +Y ++ + L I+EEM+ SG + Y ++ GLC+ G++ A
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASN 554
+++ + K P + ++ KLL S
Sbjct: 382 ILKNMMAKHIAPKD---NSIFLKLLVSQ 406
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 186/471 (39%), Gaps = 85/471 (18%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
+FN + + + P H+YN++L ++ L+ D++T GI+ + T + + +G
Sbjct: 242 YFNKMVSEGVEPTR-HTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGF 300
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNV 295
R +++ +A ++F + G S +++ V F ++ I N
Sbjct: 301 CRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNA 360
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP-DCSTFDSLLQGLGRAGR--------- 345
TY+T++ G G++ + K IL+ M+ P D S F LL +AG
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK 420
Query: 346 -----------------IED---------ALKIFDNLVEKDYVL--------ETSVYNAM 371
IE+ A+K+ D L+EK+ +L E S YN +
Sbjct: 421 AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPI 480
Query: 372 ISNFISVGDLDEAIKYYRCLLS---------NNC--------DPDI-------------- 400
I + G +A +R L+ NN +PD
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVP 540
Query: 401 ---DTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA--M 455
+ Y LI +++ + DA LD M+ G VP + S IE L G A +
Sbjct: 541 RESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRV 600
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
M+ + G + ++ +L L G L + + ++G+++D++ +++ L
Sbjct: 601 MMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLD---SLLSVL 657
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
G+ A+ +++ L + Y K+ + LL + K AY + KI
Sbjct: 658 SEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKI 708
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 116/273 (42%), Gaps = 6/273 (2%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
N +++ LC A F + + + N +I G +K G +IL+ M
Sbjct: 478 NPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRR 537
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G + + ++ L++ G DA D++VE +V ++S++ ++I + G + A
Sbjct: 538 GVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 597
Query: 385 IKYYRCLLSNNC--DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
+ ++ N + ++D K++ A + V +AL +D + G T + S +
Sbjct: 598 SRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNG---HTADLDSLL 654
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
L G AA+ + + + S+Y +L L GK ++ ++ E G S
Sbjct: 655 SVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSS 714
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
+D + + +I L G + A V+ + KG
Sbjct: 715 TDWKSSDELIKSLNQEGNTKQAD-VLSRMIKKG 746
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL--ETSVYNAMISNFISVGDLDEAIK 386
D S ++L G A ++E AL+ F E+ ++ + + MI V L+ A
Sbjct: 116 DHSLVYNVLHG---AKKLEHALQFF-RWTERSGLIRHDRDTHMKMIKMLGEVSKLNHA-- 169
Query: 387 YYRCLLSNNCDP----DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
RC+L + + D D + LI ++ KA V +++++ +M G+ + + S
Sbjct: 170 --RCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLF 227
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
+ + G A + + G + + Y L+L + L +E+M+ G S
Sbjct: 228 KVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGIS 287
Query: 503 SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
D + +ING C +++ A + E PS + Y+ + LA ++V+ ++
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 563 FLKIKAARSNENARRF 578
F +++++ NA +
Sbjct: 348 FEEMRSSGIEPNATTY 363
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 164/367 (44%), Gaps = 15/367 (4%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
LK L L + G T + + + V + + +V A I + FG D S N L+
Sbjct: 41 LKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDG 100
Query: 271 LCKRSHVRAANSYFNAVKGKIPF----NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
C+ +R+A+ +++ F ++ ++N++ G+SK MK + E V G
Sbjct: 101 HCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK------MKMLDEVFVYMGV 154
Query: 327 -----TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
+P+ T+ + + ++G ++ ALK F ++ + +I + GDL
Sbjct: 155 MLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDL 214
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
+ A+ Y+ + ++ TYT LI F K ++ A EM M+ + P++ T+
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I+ G AM + G ++ ++AY +++ L GK I E+M++S
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
DM ++ ++N G+++ AV + + + +GF P + S + + + + ++ A
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 562 LFLKIKA 568
F KA
Sbjct: 395 YFCIEKA 401
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 149/368 (40%), Gaps = 31/368 (8%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+F + ++ +Y+ + K + LK ++ + ++ N+ T + + DG
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFN 294
+A + A+ ++ + + L+ CK+ + RA Y V+ ++ N
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
Y TII G+ + G K L M+ G D + + ++ GL G++++A +I +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT------------ 402
++ + D V + ++ M++ + G + A+ Y L+ +PD+
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Query: 403 ------------------YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
YT LI A K + + ++ G+VP TS+I
Sbjct: 388 QLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSD 504
LC G A + R + G + L AY L+ L+ G +++EM SG S D
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 505 MEVYEYII 512
V++ +I
Sbjct: 508 SAVFDLLI 515
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 4/246 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI +Y VI+ L + +++ D+ + ++ + + + ++ R+ A+ ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
E GF D +L+ ++ + K + A YF K N Y +I K G
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA----NDVMYTVLIDALCKEG 417
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+++++ + E G PD + S + GL + G + DA K+ +V++ +L+ Y
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+I S G + EA + + +L++ PD + LI A+ K +A A ++L +M +
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Query: 430 GIVPST 435
G+V +
Sbjct: 538 GLVTAV 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/255 (17%), Positives = 102/255 (40%), Gaps = 37/255 (14%)
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
+LK LV + Y S +N+++S +G + A + C+PD+ +Y LI
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 409 AFIKARKVADA-------------------------------LEMLDEM-LGQGIV---- 432
+ + A ++MLDE+ + G++
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC 159
Query: 433 -PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P+ T +++I+ C G A+ + ++ ++ + L+ + G + ++
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
+++EM+ S ++ Y +I+G C G+++ A + + P+ L+Y+ + +
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 552 ASNKVERAYKLFLKI 566
+ A K K+
Sbjct: 280 QRGDSDNAMKFLAKM 294
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 161/363 (44%), Gaps = 14/363 (3%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +Y IL A + + + + ++ G + L T +++ D + R ++ +I
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR--KIL 266
Query: 250 GNTEEF---GFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAG 304
G +E G D + + +L + +R A +F +K G P V TYN ++
Sbjct: 267 GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV-TYNALLQV 325
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ K G + +L+ M E+ D T++ L+ RAG ++A + + + +K +
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y +I + G DEA+K + + C P+ TY ++S K + + ++ML
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+M G P+ T + + + G +++ + G + + L+ S +G
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI---SAYG 502
Query: 485 KCGMLLN---IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
+CG ++ ++ EM +G+++ + Y ++N L G + V+ + KGF P+
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 542 IYS 544
YS
Sbjct: 563 SYS 565
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 173/425 (40%), Gaps = 18/425 (4%)
Query: 142 SAIESALANTGVDLSLDVVAKTLYRGNLGG-----------EAMVIFFNWAI---KQPMI 187
S +E L TG+ D V L R +L E V F W + +
Sbjct: 114 SIVEQPL--TGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGAL 171
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
D + +R LG++ K+L + + +++ + + R + KAI
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+F +E G + NV+L K R + ++ K + F+ T +T+++
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
++ G + + K+ + G+ P T+++LLQ G+AG +AL + + E ++
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN +++ ++ G EA + P+ TYT +I A+ KA K +AL++
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M G VP+T T + + L + + + + GC + + + +L G
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
+ ++ EM+ G+ D + + +I+ G +A + E GF Y+
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 546 LYNKL 550
L N L
Sbjct: 532 LLNAL 536
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 149/394 (37%), Gaps = 38/394 (9%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
P D +YN ++ A + F ++ + +G+ N T + V D +A + +A++
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGW 305
+F + +E G +T + N +L L K+S +K G P N AT+NT++A
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP-NRATWNTMLALC 466
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
G + ++ M GF PD TF++L+ GR G DA K++ + +
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF--------------- 410
+ YNA+++ GD + S P +Y+ ++ +
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 411 --------------------IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
K R +A + G P S +
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A I + R+ G L Y L+ R G+C I + +++S D+ Y
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYS 544
+I G C G ++ AV ++ E +G P Y+
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYN 740
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 165/396 (41%), Gaps = 38/396 (9%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNL 226
G G E + +++K+ + +YN +L LGKK + M+KML D+++ G + N
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Query: 227 ETLSIVADGLVRAQRVYKAI-QIFGNTEEFGFGCDTESLNVLLQCLCK-RSHVRAANSYF 284
T + + L + + K + ++F + GF D ++ N L+ + S V A+ Y
Sbjct: 457 ATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 285 NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ V TYN ++ ++ G + ++ M GF P +++ +LQ + G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 345 ------RIEDALK---IFDNLV------------------EKDYVL--------ETSVYN 369
RIE+ +K IF + + E+ + L + ++N
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+M+S F D+A + + PD+ TY L+ +++ + A E+L +
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
+ P + + I+ C G A+ + + G + + Y + + G +
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
++ E M ++ + ++ +++G C G+ A+
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 1/242 (0%)
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D + ++ LGR + A K+ D + ++Y+L+ Y ++ + G ++AI +
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 389 RCLLSNNCDPDIDTYTKLISAFIK-ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+ P + TY ++ F K R L +LDEM +G+ T ++ +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A + + G + Y LL + G L++ +EM+E+ +D
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 508 YEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
Y ++ G + A V+E KG P+ + Y+ + + + K + A KLF +K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 568 AA 569
A
Sbjct: 414 EA 415
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/273 (18%), Positives = 121/273 (44%), Gaps = 38/273 (13%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD---------GLVRAQR 241
+ +YN +L AL +K ++ D++++G + S++ G+ R +
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 242 VYKAIQIF--------------------GNTEEF------GFGCDTESLNVLLQCLCKRS 275
K QIF G+ F G+ D N +L + +
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 276 HVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
A +++ G P ++ TYN+++ + + G+ + ++IL+ + + PD ++
Sbjct: 646 MYDQAEGILESIREDGLSP-DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
+++++G R G +++A+++ + E+ YN +S + ++G E C+
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
N+C P+ T+ ++ + +A K ++A++ + ++
Sbjct: 765 NDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Query: 271 LCKR-SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD 329
LCK +H+ A N + + I NV TYN +I + G+ ++L M+E PD
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 330 CSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR 389
TF +L+ + ++ +A +I+ ++ T YN+MI F +D+A +
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 390 CLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
+ S C PD+ T++ LI+ + KA++V + +E+ EM +GIV +T T T+ I C G
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 450 PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
AA + G + +L L + I E++Q+S
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%)
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
+++ L + G +A +F + EK YN MI +F G +A + R ++
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
+PDI T++ LI+AF+K RKV++A E+ EML I P+T T S I+ C A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
+ GC + + L+ + + + I+ EM G ++ Y +I+G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNE 573
C +G L+ A ++ E + G P + + + L + ++ +A+ + ++ + +
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHH 253
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%)
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+ I +V I+ K G + + M E G P+ T++ ++ +GR
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
DA ++ +++EK + ++A+I+ F+ + EA + Y+ +L + P TY +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
F K +V DA MLD M +G P T ++ I C M I+ + G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ Y L+ + G ++ EM G + D + ++ GLC+ +L A +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 528 MEE 530
+E+
Sbjct: 243 LED 245
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 65/295 (22%)
Query: 71 NELKDQSNFDESYVLNELSNLLPFSANAAPTAHPYRNNQSNKLEESKVVADLFLLPEEKL 130
N + Q+ F E + N+L ++ H R + +++L L
Sbjct: 25 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL----------------L 68
Query: 131 RGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKD 190
R + +++N SAL N V A+ +Y+ L W+I P
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML---------RWSI----FPTT 115
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
I +YN ++ K+ +D +ML + ++G + ++ T S + +G +A+RV ++IF
Sbjct: 116 I-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 174
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQ 310
G I N TY T+I G+ ++G
Sbjct: 175 EMHRRG----------------------------------IVANTVTYTTLIHGFCQVGD 200
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE-KDYVLE 364
+ + +L M+ G PD TF +L GL + A I ++L + +D+ LE
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLE 255
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
YN +++ ++ G V +MK++ M+ED +PD TF++L+ G + G + +A + L+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+ + Y + I+ ++D A K ++ + N C + +YT+LI +A+K+
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
+AL +L +M P+ T T I+ LC G AM ++K+ ++G K Y +L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
+ E M E+G ++ Y +I G C + A+ ++ + L +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 538 PSRLIYSKL 546
P + Y+ L
Sbjct: 362 PDLITYNTL 370
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 3/241 (1%)
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
TP C +++LL L R G +E+ +++ ++E + +N +++ + +G + EA
Sbjct: 118 LTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+Y L+ CDPD TYT I+ + ++V A ++ EM G + + T I L
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
A+ + + + C ++ Y +L+ L G+ +N++++M ESG D
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLK 565
+Y +I C+ L+ A ++E L G P+ + Y+ L N V +A L K
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSK 354
Query: 566 I 566
+
Sbjct: 355 M 355
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 150/358 (41%), Gaps = 12/358 (3%)
Query: 163 TLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGI 222
+L+ NL + + F +W + P ++ SY ++ L ++ I + + + L +
Sbjct: 32 SLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQE-IPYEVPKITILMIKSC 90
Query: 223 TVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS 282
+ L +V R R G++ E + + N LL L + V
Sbjct: 91 NSVRDALFVV--DFCRTMRK-------GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKR 141
Query: 283 -YFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLG 341
Y ++ + ++ T+NT++ G+ K+G V + K+ + +++ G PD T+ S + G
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 342 RAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDID 401
R ++ A K+F + + Y +I +DEA+ + +NC P++
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 402 TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRA 461
TYT LI A + + ++A+ + +M GI P T I+ CS A + +
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 462 RKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ G ++ Y L+ + + + +M E D+ Y +I G C+ G
Sbjct: 322 LENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 346 IEDALKIFD--------NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
+ DAL + D + E Y L YN ++S+ G ++E + Y +L +
Sbjct: 93 VRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVS 152
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
PDI T+ L++ + K V +A + + ++ G P T TSFI C AA +
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
+K + GC + +Y L+ L K L++ +M++ ++ Y +I+ LC
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
GQ A+ + ++ G P +Y+ L + + ++ A
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 175/395 (44%), Gaps = 5/395 (1%)
Query: 180 WAIKQPMIPK----DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
W Q MI + D+H Y V+ + K+ K+L ++ + GI N+ +I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFN 294
L R ++ +A ++F ++ G + + + ++ CK +VR A + + ++ N
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V + T++ G+ K ++ + + MV+ G P+ ++ L+ G ++G + +A+ +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ + + Y +I+ + EA + ++ + + P TY LI + K
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ AL++ EM G+ P+ T ++ I+ C+ AAM +Y G + Y
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
L+ + L ++ +M E+G + + +++G G+L A+ +E+ +
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
C + + ++ L L + + RA + F +++
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSC 578
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 173/407 (42%), Gaps = 11/407 (2%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +++ Y + + L + ++ KM ++ G+ NL T S + DG + V +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGW 305
++ + L+ CK + A S F + VK + N+ YN +I G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K G + + +L M +PD T+ L+ GL ++ +A ++F + + +
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+ YN++I + ++++A+ + ++ +P+I T++ LI + R + A+ + E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M +GIVP T T+ I+ A+ +Y +AG + + L+ + G+
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
+ ++ ++E + + + +I GLC G + A + G P Y
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 546 LYNKLLASNKVERAYKLFLKIKAARS--------NENARRFWRANGW 584
+ L ++ + L+ ++ N+ RF++ANG+
Sbjct: 590 MLKGHLQEKRITDT--MMLQCDMIKTGILPNLLVNQLLARFYQANGY 634
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 127/293 (43%), Gaps = 5/293 (1%)
Query: 280 ANSYFNAVKG-KIP-FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
++ FNA++ + P F++ ++ +I + ++G ++ L E +PD S+L
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGL---FEEALWVSREMKCSPDSKACLSIL 171
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
GL R R + + ++ + V + +Y + G + K + S
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
P++ YT I + K+ +A +M + M G++P+ T ++ I+ C G A +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
YK A ++ + L+ + + +++ M + G ++ VY +I+G C
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
G + AV ++ E P Y+ L N L ++V A +LF K+K R
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 193/452 (42%), Gaps = 22/452 (4%)
Query: 113 LEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGE 172
+ E KV L L + G+F + S ++ L G++L+ + V L RG
Sbjct: 212 IRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNA 271
Query: 173 AMVIFF------------NW----AIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRD 216
A++ F W +K I DI ++ V + L K F+ +L
Sbjct: 272 AVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK 331
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
L+ GI+ + ++S V DG + + +AI++ F + + L +C
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI---HSFRLRPNIFVYSSFLSNICSTGD 388
Query: 277 VRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
+ A++ F + G +P + Y T+I G+ +G+ + + A+++ G P +T
Sbjct: 389 MLRASTIFQEIFELGLLP-DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
L+ R G I DA +F N+ + L+ YN ++ + L++ + + S
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
PD+ TY LI + + + +A E++ E++ +G VPST T I G A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
+++ K + LL + + + ++ ++ ++G D+ +Y +I+G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
C++G +E A ++ + +G P+ + L
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 120/277 (43%), Gaps = 3/277 (1%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ + I K G + + +L + G + D + S++ G + G+ E+A+K+
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + + VY++ +SN S GD+ A ++ + PD YT +I +
Sbjct: 365 HSFRLRPNIF---VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A + +L G PS T T I FG A +++ + G K+ + Y
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ + + + + +EM+ +G S D+ Y +I+ + G ++ A ++ E +
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+GF PS L ++ + + A+ L+ + R
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 187/456 (41%), Gaps = 31/456 (6%)
Query: 128 EKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWA------ 181
E +R V L K N ES + ++ + L+ L ++ FF W+
Sbjct: 84 ETIRNV-LVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGV 142
Query: 182 -IKQPMIPKDIH---SYNVILRAL-----------GKKKFIDFMLKMLRDLRTEGITVNL 226
I + IH S N+ RA+ G+++ + ++K L + R + L
Sbjct: 143 EHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRV--L 200
Query: 227 ETL-SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
ET+ SI+ D +R ++V A+++ ++FG LL+ + + + A +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 286 AV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRA 343
+ +G+ N A + I + G + ++L M G PD F + L +A
Sbjct: 261 HMLSRGR-HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKA 319
Query: 344 GRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTY 403
G +++A + L ++ +++I F VG +EAIK + S P+I Y
Sbjct: 320 GFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVY 376
Query: 404 TKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
+ +S + A + E+ G++P T+ I+ C+ G A + K
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 464 AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
+G SL+ +L+ SRFG +++ M+ G D+ Y +++G QL
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 524 AVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
+++E G P Y+ L + ++ ++ A
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
>AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24528423-24529988 REVERSE
Length = 521
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 192/453 (42%), Gaps = 33/453 (7%)
Query: 47 IPVSLSQFSTLDTELNTLGHKPSVNELKDQSNFDESYVLNELSNLLPFSANAAPTAHPYR 106
+P SL L + SVN L+ Q S L + LP S ++ + P R
Sbjct: 1 MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISS---KPLFSPLPPSRSSIFSTFPSR 57
Query: 107 --NNQSNKLEESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSL------- 157
++++N ES L ++ F ++L G ES + +LS
Sbjct: 58 FFSSETNAESES--------LDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNP 109
Query: 158 DVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL 217
D++ +TL G A + F W + + + G++K ML+++
Sbjct: 110 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS-- 167
Query: 218 RTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE-EFGFGCDTESLNVLLQCLCKRSH 276
+ +GI +TL D LVRA R + F E ++G D ESL ++++ LC++ H
Sbjct: 168 KYKGIAGG-KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGH 226
Query: 277 VRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
A +I + + +I+GW ++ + ++ M GF ++ +
Sbjct: 227 ASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMM 286
Query: 337 LQGLGRAGRIEDALKIFDN----LVEKDY---VLETSVYNAMISNFISVGDLDEAIKYYR 389
L + + R +D K+ L+E ++ T +N +I+N + +EA+ +
Sbjct: 287 LDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFG 346
Query: 390 CLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM--LGQGIVPSTGTVTSFIEPLCS 447
+ C PD +TY LI + +A ++ + EM+D+M G G + + F++ LC
Sbjct: 347 RMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCG 406
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL 480
AM ++K + GCK + Y LL+ ++
Sbjct: 407 IERLEHAMSVFKSMKANGCKPGIKTYDLLMGKM 439
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 161/371 (43%), Gaps = 17/371 (4%)
Query: 195 NVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE 254
+V+L L K ID L + ++ +G++ +L SIV GL + + A+ ++ +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 255 FGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKIGQVCQ 313
++ + LL LC++ + A S ++ + ++ YN +I G++K G + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV--YNAM 371
++ + ++E G TP +TF+SL+ G + I +A KI D V K Y L SV Y +
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD--VIKLYGLAPSVVSYTTL 544
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE------ 425
+ + + G+ + R + + P TY+ + + K + +L E
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 426 ------MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
M +GI P T + I+ LC A + + + S + Y +L+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
L +G + +QE S Y +I C G E AV + + LH+GF S
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 540 RLIYSKLYNKL 550
YS + N+L
Sbjct: 725 IRDYSAVINRL 735
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 174/409 (42%), Gaps = 16/409 (3%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF +K ++P ++S+N+++ L I L++ D+ G+ + T +I+A G
Sbjct: 244 FFCTVLKCGLVPS-VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFN 294
+ A ++ + + G D + +LL C+ ++ + +G +
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 362
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
+ + +++G K G++ + + M DG +PD + ++ GL + G+ + AL ++D
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ +K + + + A++ G L EA L+S+ DI Y +I + K+
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ +ALE+ ++ GI PS T S I C A I + G S+ +Y
Sbjct: 483 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 542
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL-- 532
L+ + G + + EM+ G Y I GLC + EN V+ E +
Sbjct: 543 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 533 ----------HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARS 571
+G P ++ Y+ + L + A+ +FL+I +R+
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIMKSRN 650
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 169/371 (45%), Gaps = 2/371 (0%)
Query: 180 WAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRA 239
W + + + K+ H+Y+ ++ L +++ ++ + LR + I ++ + + + G +
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 240 QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATY 298
V A F + G S N+L+ LC + A + + K + + TY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
N + G+ +G + +++ M++ G +PD T+ LL G + G I+ L + +++
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 359 KDYVLETSV-YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+ + L + + + M+S G +DEA+ + + ++ PD+ Y+ +I K K
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
AL + DEM + I+P++ T + + LC G A + +G + + Y +++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
++ G L +++ + E+G + + + +I G C + A +++ G
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 538 PSRLIYSKLYN 548
PS + Y+ L +
Sbjct: 536 PSVVSYTTLMD 546
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 172/372 (46%), Gaps = 9/372 (2%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
++++L + + +D L +L+ ++ + + V+ ++ + V +++ + +
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKN 186
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVC 312
E + + ++ LC++ + A + + K I +V ++N+I++G+ K+G V
Sbjct: 187 EHTY-------STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVD 239
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
K +++ G P + + L+ GL G I +AL++ ++ + ++ YN +
Sbjct: 240 MAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI- 431
F +G + A + R +L PD+ TYT L+ + + L +L +ML +G
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
+ S + + LC G A+ ++ + + G L AY +++ L + GK M L
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
+++EM + + + ++ GLC G L A +++ + G ++Y+ + +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 552 ASNKVERAYKLF 563
S +E A +LF
Sbjct: 480 KSGCIEEALELF 491
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 4/326 (1%)
Query: 139 NGKSAIESALANTGVDLSLDVVAKTLYRGNL--GGEAMVIFFNWA-IKQPMIPKDIHSYN 195
N K +E L ++ + LD+V T+ + G + W + Q +P D YN
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 196 VILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEF 255
VI+R L + + D+ G+ ++ T + + L + + +A + G +
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 256 GFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVCQM 314
G D S V++Q LC V AN + ++ V +N +I G+ + G
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
+L M+ G P+ T ++L+ G + GR+ DA + + + +T+ YN ++
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
++G L A + Y +L C PDI TYT+L+ ++ A +L + GI
Sbjct: 485 ACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKR 460
+ P A ++YK+
Sbjct: 545 HVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 177/419 (42%), Gaps = 42/419 (10%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
IHS I+R L + +D L + + + G+ L T + + +GL +A + KA +
Sbjct: 123 IHS--SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIG 309
E G + S N L++ LC ++V A FN + K I N T N I+ + G
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 310 QVCQM-KKILEAMVE--DGFTP-DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ KK+LE +++ P D L+ + G + AL+++ + +K+ ++
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
VYN +I S G++ A + ++ +PD+ TY LISA K K +A ++
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAA--------------------MMIYKRARKAG 465
M G+ P + I+ LC G + A ++I R
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 466 CKISLSAYKLLL------------MRLSRFGKCGMLLNIW---EEMQESGYSSDMEVYEY 510
+LS L+L + + K G L++ W EM+ + D Y
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
++ C +G L A + +E L +G P + Y++L L ++++A L +I+A
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQAT 539
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 171/429 (39%), Gaps = 44/429 (10%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
I +IP I ++N +L L K +I+ ++R++R G + N + + + GL
Sbjct: 148 IYSGVIPGLI-THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHV--------------RAANSYFNAV 287
V KA+ +F ++G + + N+++ LC++ + AN+ + V
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIV 266
Query: 288 --------------------------KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAM 321
+ +P + YN II G G + + M
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
V+ G PD T+++L+ L + G+ ++A + + + Y +I GD+
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDV 386
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
+ A ++ +L ++ P++ + +I + + + AL +L+ ML G+ P+ T +
Sbjct: 387 NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
I G A + R + Y LLL G + +++EM G
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSR---LIYSKLYNKLLASNKVER 558
D+ Y ++ GLC G+L+ A ++ G LI +K Y +L +
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYL 566
Query: 559 AYKLFLKIK 567
YK +L +
Sbjct: 567 VYKKWLATR 575
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/424 (20%), Positives = 171/424 (40%), Gaps = 38/424 (8%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFID--FMLKMLRDLRTEGITVNLETLSIVADGLVRA 239
++Q D +Y++++++L + ID +L++ +++ + + ++++ ++ + G ++
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 240 QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATY 298
KA+Q+ G + G T +L ++ L A + F ++ I Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
N ++ G+ K G + + ++ M + G +PD T+ L+ AGR E A + +
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
D + V++ +++ F G+ + + + + S PD Y +I F K +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL- 477
A+ D ML +GI P T + I+ C G A +++ + GC + Y +++
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 478 ----------MR--LSRFGKCGMLLNI----------------------WEEMQESGYSS 503
M+ L + G+L N+ EEM+ G
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+Y +IN G E AV G PS L + L N + A+ +
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Query: 564 LKIK 567
+K
Sbjct: 643 QYMK 646
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 157/380 (41%), Gaps = 12/380 (3%)
Query: 194 YNVILRALGK--KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
Y++++ ALG+ K + F+L ++ T+ T + + R + KA+ +
Sbjct: 170 YSILIHALGRSEKLYEAFLL-------SQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAA---NSYFNAVKGKIPFNVATYNTIIAGWSKI 308
+ G+ D + ++++Q L + + + + Y + K+ +V N II G++K
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + ++L G + +T S++ L +GR +A +F+ L + T Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
NA++ ++ G L +A + PD TY+ LI A++ A + A +L EM
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ P++ + + G + K + G K Y +++ +F
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ ++ M G D + +I+ C G+ A + E +G P Y+ + N
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 549 KLLASNKVERAYKLFLKIKA 568
+ + +L K+K+
Sbjct: 523 SYGDQERWDDMKRLLGKMKS 542
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 195/471 (41%), Gaps = 35/471 (7%)
Query: 105 YRNNQSNKLE-ESKVVADLFL------LPEEKLRGVFLQKLNGKSA-------IESALAN 150
Y+ + +KLE + ++V D+ + P + L+ + + + G SA I SALA+
Sbjct: 257 YKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALAD 316
Query: 151 TGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFM 210
+G L EA +F ++Q I +YN +L+ K +
Sbjct: 317 SGRTL----------------EAEALFEE--LRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
M+ ++ G++ + T S++ D V A R A + E ++ + LL
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 271 LCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
R + +K G P + YN +I + K + + M+ +G P
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D T+++L+ + GR A ++F+ + + + + YN MI+++ D+ +
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ S P++ T+T L+ + K+ + DA+E L+EM G+ PS+ + I
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
G A+ ++ G K SL A L+ + + + M+E+G D+ Y
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
++ L + + + +V EE + G P R S L + L + RA
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/369 (16%), Positives = 153/369 (41%), Gaps = 6/369 (1%)
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
KQ + P +YN ++ A + I+ L ++ +R +G + S+V L R+ ++
Sbjct: 192 KQTLTPL---TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKI 248
Query: 243 YKA--IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYN 299
++++ E D + +N ++ K A + + AT
Sbjct: 249 DSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLV 308
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
+II+ + G+ + + + E + + G P +++LL+G + G ++DA + + ++
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ Y+ +I +++ G + A + + + + P+ +++L++ F +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
++L EM G+ P I+ F AM + R G + + L+
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
+ G+ + ++E M+ G Y +IN + + ++ ++ + +G P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 540 RLIYSKLYN 548
+ ++ L +
Sbjct: 549 VVTHTTLVD 557
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 101/247 (40%), Gaps = 7/247 (2%)
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
L+ LGR+ ++ +A L+ + L YNA+I D+++A+ + +
Sbjct: 173 LIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDG 227
Query: 396 CDPDIDTYTKLISAFIKARKVADA--LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
D Y+ +I + ++ K+ L + E+ + V I G P
Sbjct: 228 YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A+ + A+ G + ++ L+ G+ ++EE+++SG Y ++
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLK 347
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNE 573
G G L++A ++ E +G P YS L + + + + E A + +++A
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 574 NARRFWR 580
N+ F R
Sbjct: 408 NSFVFSR 414
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 168/376 (44%), Gaps = 7/376 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
++++++ K ++ ++ R++ G +V++ T + + +GL++ + Q++
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQV 311
G +T + N+L C S+ R + + ++ G P ++ TYNT+++ + + G++
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEP-DLVTYNTLVSSYCRRGRL 287
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+ + + M PD T+ SL++GL + GR+ +A + F +V++ + YN +
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I + G + ++ K +L N+ PD T ++ F++ ++ A+ + E+ +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRA-RKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
I LC G P AA + R + G + Y L+ LSR L
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL---Y 547
+ +++ D + Y +I LC IG+ A +M E P I L Y
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGY 527
Query: 548 NKLLASNKVERAYKLF 563
K L +K ER LF
Sbjct: 528 CKELDFDKAERLLSLF 543
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 154/408 (37%), Gaps = 85/408 (20%)
Query: 180 WAIKQPMIPKDIH----SYNVILRALGK----KKFIDFMLKMLRDLRTEGITVNLETLSI 231
W + M IH ++N++ ++ DF+ KM EG +L T +
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM----EEEGFEPDLVTYNT 276
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN-AVKGK 290
+ R R+ +A ++ D + L++ LCK VR A+ F+ V
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
I + +YNT+I + K G + Q KK+L M+ + PD T +++G R GR+ A+
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 351 -----------------------------------KIFDNLVEKD-YVLETSVYNAMISN 374
+ D ++E++ + + YN +I +
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
++EA+ L + N D TY LI + + +A ++ EM + P
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Query: 435 TGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWE 494
SFI ++Y ++ F K LL+++
Sbjct: 517 -----SFI----------CGALVYGYCKELD-----------------FDKAERLLSLF- 543
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK-GFCPSRL 541
M+ + D E Y ++ +C G L ++E + + GF P+RL
Sbjct: 544 AMEFRIF--DPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRL 589
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 2/252 (0%)
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
K P + +I SK +V + ++ A E + P FD L++G + G +E+
Sbjct: 128 KFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDP--VVFDMLVKGYLKLGLVEEG 185
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
++F +++ + + N +++ + + +++ + Y + P+ T+ L +
Sbjct: 186 FRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNV 245
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
F + + L++M +G P T + + C G A +YK +
Sbjct: 246 FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD 305
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
L Y L+ L + G+ + M + G D Y +I C G ++ + ++
Sbjct: 306 LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLH 365
Query: 530 ESLHKGFCPSRL 541
E L P R
Sbjct: 366 EMLGNSVVPDRF 377
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 5/328 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF W Q + Y+++++ + M +++ ++ +G T +++
Sbjct: 138 FFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC 197
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFN 294
A ++ F ++ F + S N +L L + + + + G P +
Sbjct: 198 GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTP-D 256
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V TYN ++ ++G+ ++ ++L+ MV+DGF+PD T++ LL L + AL + +
Sbjct: 257 VLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLN 316
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC-LLSNNCDPDIDTYTKLISAFIKA 413
++ E + +I G L EA KY+ + C PD+ YT +I+ +I
Sbjct: 317 HMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITGYISG 375
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
++ A EM EM +G +P+ T S I C G A + K GC + Y
Sbjct: 376 GELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVY 435
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGY 501
L+ L GK + ++M E G+
Sbjct: 436 STLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
Y+ ++ +++ G+ M ++++ M++DG+ TF+ L+ G AG D ++ F
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+Y YNA++ + + V Y +L + PD+ TY ++ A + K
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
+LDEM+ G P T + L + P AA+ + R+ G + + + L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
LSR GK +E + G + D+ Y +I G + G+LE A + +E KG
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
P+ Y+ + + K + A L ++++ N N
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
+YN I+ + Q + + E M+EDGFTPD T++ ++ R G+ + ++ D +
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
V+ + + YN ++ + + A+ + +P + +T LI +A K+
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+DE + G P T I S G A ++K + G ++ Y +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
+ GK + +EM+ G + + VY ++N L N G++ A V+++ + KG
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 178/444 (40%), Gaps = 72/444 (16%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+H+ N + L ID K+ +++ + G N+ T ++V + ++++A+ +F
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK----GKIPFNVATYNTIIAGWS 306
+ G + S N+++ CK +R A + + N TYN++I G+
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
K G++ ++I MV+ G + T+ +L+ GRAG ++AL++ D + K V+ T
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 367 VYNAMISNFISVGDLD-----------------------------------EAIKYYRCL 391
+YN+++ GD++ EA+++ R +
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
DI + L+ F++ +K+A A ++L ML QG+ + + I+ G
Sbjct: 423 SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKL 482
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG------------------MLLN-- 491
A+ IY K +L Y ++ LS+ G G LLN
Sbjct: 483 ERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNES 542
Query: 492 -----------IWEEMQESG--YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
I +MQ+ S + + +IN LC G E A V++ + +G P
Sbjct: 543 LKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVP 602
Query: 539 SRLIYSKLYNKLLASNKVERAYKL 562
+ Y L E+ +L
Sbjct: 603 DSITYGTLITSFSKHRSQEKVVEL 626
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D + +++R L + ++ ++ R + + + ++ + + VR +++ A QI
Sbjct: 395 DRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQIL 454
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
G+ G D S L+ K + RA Y +K N+ YN+I+ G SK
Sbjct: 455 GSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKR 514
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV- 367
G M EA+V D T+++LL + G +E+A I + ++D S+
Sbjct: 515 G----MAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLV 570
Query: 368 -YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
+N MI++ G ++A + + ++ PD TY LI++F K R +E+ D +
Sbjct: 571 TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
Query: 427 LGQGIVPSTGTVTSFIEPL 445
+ QG+ P S + PL
Sbjct: 631 ILQGVTPHEHIYLSIVRPL 649
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 150/360 (41%), Gaps = 38/360 (10%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+Y ++ A G+ D L++ ++ ++G+ VN + + L + A+ + +
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQV 311
D + ++++ LC+ +V+ A + + + K+ ++ +NT++ + + ++
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+IL +M+ G + D +F +L+ G + G++E AL+I+D +++ + +YN++
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
++ G A +++ DI TY L++ +K V +A ++L +M Q
Sbjct: 508 VNGLSKRGMAGAA----EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDG 563
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
S +SL + +++ L +FG
Sbjct: 564 EKS---------------------------------VSLVTFNIMINHLCKFGSYEKAKE 590
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLL 551
+ + M E G D Y +I E V + + + +G P IY + LL
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 112/281 (39%), Gaps = 3/281 (1%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
+++++ ++ G +++E +GF ++ + L I+ K++ +
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
YV + +N +I +F L EA+ + +L P++ ++ +I K +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 417 ADALEMLDE---MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
AL++L + M G + P+ T S I C G A I K+G + Y
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ R G L + +EM G + +Y I+ L G +E A+ V+ +
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
K R + + L + V+ A + +I + E+
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 125/260 (48%), Gaps = 1/260 (0%)
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ + ++L MV +G PD T D ++ L GR+++A + L EK +T YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 371 MISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
++ + DL ++ + + + PD+ ++T LI ++ + +A+ ++ ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G P + ++ C+ A+ +YK+ ++ G + Y L+ LS+ G+
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
+ M ++GY D Y ++NG+C G+ A+ ++EE +G P+ Y+ L +
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 550 LLASNKVERAYKLFLKIKAA 569
L + +++ +L+ +K++
Sbjct: 380 LCKARLMDKGMELYEMMKSS 399
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 181/438 (41%), Gaps = 19/438 (4%)
Query: 89 SNLLPFSANAAPTAHP--YRNNQSNKLEESKVVADLFLLPEEKLRGVFLQK--LNGKSAI 144
+NLL +P A P +RN + + +K+ + E LR F + KS
Sbjct: 13 ANLLVRKTTPSPPAPPRDFRNRTAVGGDSAKLPQNTQAPREPSLRNPFKSPNLSDAKSLF 72
Query: 145 ESALANTGVDLSLDVVAKTLYR-GNLG--GEAMVIFFNWAIKQPMIPKDIHSYNVILR-- 199
S A + + L L L G++ + + +F + QP ++ ++L
Sbjct: 73 NSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHA 132
Query: 200 ALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGC 259
I + ++L + G+ + T I L RV +A + E
Sbjct: 133 CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP 192
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
DT + N LL+ LCK + + + ++ F+V +++ I VC K + E
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD--FDVKP--DLVSFTILIDNVCNSKNLRE 248
Query: 320 AMV------EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
AM GF PDC ++++++G + +A+ ++ + E+ + YN +I
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
G ++EA Y + ++ +PD TYT L++ + + AL +L+EM +G P
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAP 368
Query: 434 STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+ T + + LC M +Y+ + +G K+ + Y L+ L + GK ++
Sbjct: 369 NDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Query: 494 EEMQESGYSSDMEVYEYI 511
+ +S SD Y +
Sbjct: 429 DYAVDSKSLSDASAYSTL 446
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 148/362 (40%), Gaps = 12/362 (3%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL--RTEGITVNLETLSIVAD 234
FN IP D+ +N +L++ G ++ +K+ + + T I+
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 235 GLVRA-----QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG 289
RA V++ + + N G D + ++ ++ LC+ V A +
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNN---GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 290 K-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED-GFTPDCSTFDSLLQGLGRAGRIE 347
K P + TYN ++ K + + + ++ M +D PD +F L+ + + +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
+A+ + L + + +YN ++ F ++ EA+ Y+ + +PD TY LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
KA +V +A L M+ G P T T TS + +C G A+ + + GC
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
+ Y LL L + + ++E M+ SG + Y ++ L G++ A V
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Query: 528 ME 529
+
Sbjct: 428 FD 429
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 9/280 (3%)
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG-FTPDCSTFDSLLQGLGRAGRIEDAL 350
PF+ + +I+G+ KIG+ E+ V+ G P+ T+ +L+ L + G++++
Sbjct: 168 PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVR 227
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+ L ++ + + Y+ I + G L +A+ R ++ + D+ +Y+ LI
Sbjct: 228 DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL 287
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
K V +AL +L +M+ +G+ P+ T T+ I LC G A +++ R G ++
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
Y L+ + R G ++ +M++ G + Y +INGLC G++ A +
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----D 402
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKL---FLKIK 567
+ KG + YS L + + ++ ++ FL+ K
Sbjct: 403 EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 152/349 (43%), Gaps = 7/349 (2%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
+D+ SY++++ L K+ ++ L +L + EG+ NL T + + GL + ++ +A +
Sbjct: 275 RDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSK 307
F G D L+ +C++ ++ A S ++ + I ++ TYNT+I G
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCM 394
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G+V + + V G D T+ +LL + I+ L+I +E ++ +
Sbjct: 395 AGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM 449
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
N ++ F+ +G EA YR + + PD TY +I + K ++ +ALEM +E L
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-L 508
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
+ V + I+ LC G A + + G + + + LL + G
Sbjct: 509 RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK 568
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+L + +++ + + I LC G E A+ V KG
Sbjct: 569 GILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL 617
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 167/417 (40%), Gaps = 42/417 (10%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
IK+ + P I +Y I+R L K ++ + + + GI V+ + DG+ R
Sbjct: 304 IKEGVEPNLI-TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG------------ 289
+ +A + G+ E+ G + N ++ LC V A+ V G
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSY 422
Query: 290 -------------------KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
KIP ++ N ++ + +G + + AM E TPD
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
+T+ ++++G + G+IE+AL++F+ L K V YN +I G LD A +
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIE 541
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
L DI T L+ + L ++ + G + I LC G
Sbjct: 542 LWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGS 601
Query: 451 PHAAMMIYKRARKAGCKISL--SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
AA+ +Y R+ G ++ + K L+ L +++N E S M+V
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSS-----MDVI 656
Query: 509 EY--IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+Y IINGLC G L A+ + + +G + + Y+ L N L + A +LF
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 36/338 (10%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ Y +I+ L K+ F+ L + ++ G+T+N T + + +GL + + +A+++F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSK 307
+ E G + +L+ LCK A +++ KG +P N+ YN+I+ G+ K
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP-NIIIYNSIVDGYCK 772
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+GQ +++ + TPD T S+++G + G +E+AL +F +K+ +
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE-MLDEM 426
+ +I F + G ++EA R +L + ++ KLI+ ++++ L E+
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVS------ESVVKLINRVDAELAESESIRGFLVEL 886
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
QG VP + I IY + G +Y+ RL
Sbjct: 887 CEQGRVPQAIKILDEISS-----------TIYPSGKNLG------SYQ----RLQFLNDV 925
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
EE+++ Y D ++ LC G+LE A
Sbjct: 926 N-----EEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 166/387 (42%), Gaps = 29/387 (7%)
Query: 132 GVFLQKLNGKSAIESALANTG-VDLSLDVVAKTLYRGNLGGEAMVIFF-NWAIKQPMIPK 189
GV + L + + SAL G VD D+V + + G E +F+ NW
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL---EDEGFEFDCVFYSNW--------- 248
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
IH Y +D +++ R++ +G+ ++ + SI+ DGL + V +A+ +
Sbjct: 249 -IHGY------FKGGALVDALMQD-REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKI 308
G + G + + +++ LCK + A FN + I + Y T+I G +
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + + +L M + G P T+++++ GL AGR+ +A + V K V + Y
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITY 415
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+ ++ ++I V ++D ++ R L D+ L+ AF+ +A + M
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ P T T + I+ C G A+ ++ RK+ ++ Y ++ L + G
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDT 534
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGL 515
+ E+ E G D+ +++ +
Sbjct: 535 ATEVLIELWEKGLYLDIHTSRTLLHSI 561
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 151/346 (43%), Gaps = 14/346 (4%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ--IFGN 251
YN I+ AL KK +D ++L +L +G+ +++ T + + A K I ++G
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS-IHANGGDKGILGLVYG- 576
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK---IPFNVATYNTIIAGWSKI 308
E+ LN + LCKR AA + ++ K + F T++ +
Sbjct: 577 LEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 636
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
+ E + + D + ++ GL + G + AL + + L T Y
Sbjct: 637 DAYLLVVNAGETTLS---SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 693
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N++I+ G L EA++ + L + P TY LI K DA ++LD M+
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL--LLMRLSRFGKC 486
+G+VP+ S ++ C G AM + +RK +++ A+ + ++ + G
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVV--SRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
L+++ E ++ S+D + ++I G C G++E A ++ E L
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 4/287 (1%)
Query: 170 GGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL 229
GG+ ++ + ++Q + N + L K+ + +++ +R +G+TV
Sbjct: 565 GGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP-- 622
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGC-DTESLNVLLQCLCKRSH-VRAANSYFNAV 287
S + LV R A + N E D +++ LCK V+A N A
Sbjct: 623 STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+ N TYN++I G + G + + ++ +++ G P T+ L+ L + G
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
DA K+ D++V K V +YN+++ + +G ++A++ + PD T + +I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
+ K + +AL + E + I I+ C+ G A
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 158/415 (38%), Gaps = 40/415 (9%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D+ +Y+ +L + K + ID +L++ R I ++L +I+ + +A ++
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
E DT + +++ CK + A FN ++ YN II K G
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKG 530
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ ++L + E G D T +LL + G + L + L + + + + N
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 370 AMISNFISVGDLDEAIKYY-----------------RCLLSN--NCDP------------ 398
I G + AI+ Y + L+ N + D
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 399 ---DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
D+ YT +I+ K + AL + +G+ +T T S I LC G A+
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN---IWEEMQESGYSSDMEVYEYII 512
++ G S Y +L+ L K G+ L+ + + M G ++ +Y I+
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLC---KEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 513 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+G C +GQ E+A+ V+ + P S + +E A +F + K
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 345 RIEDALKIFDNLVEKDYVL-ETSVYNAMISNF-ISVGDLDEAIKYYR-CLLSNNCDPDID 401
R EDA K + + K + T + +++I F I+ D + + R CL ++ P
Sbjct: 76 RYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSL 135
Query: 402 TYTKLISAFIKARKVADALEMLDEMLGQGI-VPSTGTVTS-FIEPLCSFGPPHAAMMIYK 459
T+ LI F++ ++ +A+E+L+ M + + P V S I C G P A+ ++
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 460 RARKAGCKI-SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
A +G + +L Y L+ L + GK + ++ +++ G+ D Y I+G
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 519 GQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
G L +A++ E + KG + YS L + L VE A L K+
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 174/393 (44%), Gaps = 12/393 (3%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+++ I D+ +YN ++ K ++ +L++ ++ G++ ++ + + + + R
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 242 VYKAIQIFGNTEEF-GFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNT 300
+A +I G ++ N+LL LCK H A F +K ++ + TYN
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNI 193
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+I G K +V + ++ + + G+TP+ T+ ++L+ + RIE L++F + ++
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCL----LSNNCDPDIDTYTKLISAFIKARKV 416
Y + A++S I G +EA Y C+ S DI +Y L++ + K +
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEA---YECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
++L+E+ +G+ P T T + L + G A + G + S+ L
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ L + G + ++ M+ D Y +++ LC G+L A ++ +KG
Sbjct: 371 IDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+ + + + + A K +KIKAA
Sbjct: 427 KIPSSARRAVLSGIRETVSYQAARKTHIKIKAA 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 258 GCDTESLNVLLQCLCK-RSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKK 316
G T+ LN+ + LCK R+ RA + ++ + +V TYNT+I G+++ + +
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
+ M E G PD +T++SL+ G + + L++FD ++ + YN ++S +
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF 129
Query: 377 SVGDLDEAIK-YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
+G EA K + + P IDTY L+ A K+ +A+E+ + + + P
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPEL 188
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEE 495
T I LC + + + +K+G + Y +L + + L ++ +
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 496 MQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
M++ GY+ D +++ L G+ E A M E + G
Sbjct: 249 MKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKK 316
FG D N+LL+ C ++ A S F + + +V T N ++ G+ + G V +
Sbjct: 174 FGVD--EFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATEL 231
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
MV+ GF P+ T+ + G + +AL++F+++ D+ + + +I
Sbjct: 232 FYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSG 291
Query: 377 SVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
+ +A + + + PD Y L+S+ +K V+ A++++ EM +GI P +
Sbjct: 292 VARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSV 351
Query: 437 TVTS-FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL-SRFGKCGMLLNIWE 494
T S FI + S + Y + K + + ++LM+L G+ + L++W+
Sbjct: 352 TFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWK 411
Query: 495 EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASN 554
M E GY E + LC + +A +++ +G C S +Y L L ++N
Sbjct: 412 YMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNN 471
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 169/379 (44%), Gaps = 8/379 (2%)
Query: 159 VVAKTLYRG--NLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRD 216
V L RG LG + F + Q + + +Y+ +L A K++ D +K+L +
Sbjct: 177 VTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE 236
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
+ +G NL + +++ G + R A+ +F GF + S N+LL+CLC
Sbjct: 237 IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR 296
Query: 277 VRAANSYFNAVKG--KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG--FTPDCST 332
ANS + G + P +V TYN +I + G+ Q ++L+ M + F ++
Sbjct: 297 WEEANSLLAEMDGGDRAP-SVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
++ ++ L + G+++ +K D ++ + YNA+ S + EA + L
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
+ D Y +I++ + A ++L EM G P T ++ I LC G
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFT 475
Query: 453 AAMMIYKRARKA-GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
AM + ++ CK ++ + +++ L + + + + ++E M E + Y +
Sbjct: 476 GAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAIL 535
Query: 512 INGLCNIGQLENAVLVMEE 530
+ G+ + +LE A V++E
Sbjct: 536 VEGIAHEDELELAKEVLDE 554
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 287 VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
V G NVA ++ K ++ + +++E MV G PD S + L+ L + G +
Sbjct: 98 VTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNV 157
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
A+++ + + + Y T YNA++ +G L++++++ L+ P+ TY+ L
Sbjct: 158 GYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFL 217
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ A K R +A+++LDE++ +G P+ + + C G AM +++ G
Sbjct: 218 LEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
K ++ +Y +LL L G+ ++ EM + + Y +IN L G+ E A+
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 527 VMEESLHKG---FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
V++E + KG F + Y+ + +L KV+ K ++ R N
Sbjct: 338 VLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 151/375 (40%), Gaps = 38/375 (10%)
Query: 214 LRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK 273
L L T G N+ + + L +A R+ KAI++ G D + L+ LCK
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 274 RSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
R +V A ++ P N TYN ++ G +G + Q + +E +++ G P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ LL+ + ++A+K+ D ++ K YN +++ F G D+A+ +R L
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
+ ++ +Y L+ + +A +L EM G PS T I L G
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 453 AAMMIYKRARKAG--CKISLSAYKLLLMRLSRFGKCGMLLNIWEEM-------------- 496
A+ + K K +++ ++Y ++ RL + GK +++ +EM
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 497 -----------QESGY----------SSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
QE+ Y + Y+ +I LC G A ++ E G
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Query: 536 FCPSRLIYSKLYNKL 550
F P YS L L
Sbjct: 454 FDPDAHTYSALIRGL 468
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 167/406 (41%), Gaps = 7/406 (1%)
Query: 166 RGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
RGN+G ++ ++ P + +YN ++R L ++ L+ + L +G+ N
Sbjct: 154 RGNVGYAMQLV---EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
T S + + + + +A+++ G + S NVLL CK A + F
Sbjct: 211 AFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFR 270
Query: 286 AVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ K NV +YN ++ G+ + +L M P T++ L+ L G
Sbjct: 271 ELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG 330
Query: 345 RIEDALKIFDNLVEKDYVLETSV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
R E AL++ + + ++ + YN +I+ G +D +K ++ C P+ T
Sbjct: 331 RTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT 390
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
Y + S KV +A ++ + + + S I LC G AA +
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 463 KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES-GYSSDMEVYEYIINGLCNIGQL 521
+ G Y L+ L G + + M+ES ++ + +I GLC I +
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 522 ENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+ A+ V E + K P+ Y+ L + +++E A ++ +++
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
PD+D+ + ++D+ L+ ++ G P+ T + LC A+ +
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
+ +G SAY L+ +L + G G + + E+M++ GY S+ Y ++ GLC
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 518 IGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+G L ++ +E + KG P+ YS L + A KL +I
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 95/221 (42%)
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
+ D+ ++LV + + ++ + L +AI+ ++S+ PD YT
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
L++ K V A++++++M G +T T + + LC G + ++ +R + G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
+ Y LL + + + +E+ G ++ Y ++ G C G+ ++A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 526 LVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
+ E KGF + + Y+ L L + E A L ++
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 174/414 (42%), Gaps = 38/414 (9%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+YN ++ A G L++ + + G+ +L T +IV ++ KA+ F
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK---IPFNVATYNTIIAGWSKIG 309
+ DT + N+++ CL K A FN+++ K +V T+ +I+ +S G
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 310 QVCQMKKILEAMV-----------------------------------EDGFTPDCSTFD 334
++ + + EAMV ++G PD ++
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
LL GR+ + A ++F + ++ YNA+I + S G L EA++ +R + +
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
P++ + L++A +++K + +L +GI +T S I + A
Sbjct: 455 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
+ +Y+ RK K + +L+ R K ++ +EM++ EVY ++
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 574
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
GQ+ A + + G P + Y+ + + AS K +A +LFL+++A
Sbjct: 575 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 12/375 (3%)
Query: 166 RGNLGGEAMVIFF---NWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGI 222
R N +A +FF W+ K D +Y+ ++ A G+ + + ++ D+ I
Sbjct: 155 RHNWVDQARGLFFEMQKWSCK-----PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAI 209
Query: 223 TVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS 282
+ T + + + + +A+++ + G G D + N++L A S
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 283 YFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT--PDCSTFDSLLQG 339
YF +KG K+ + T+N II SK+GQ Q + +M E PD TF S++
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 329
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
G IE+ +F+ +V + YNA++ + G A+ + N PD
Sbjct: 330 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ +YT L++++ ++R+ A E+ M + P+ T + I+ S G A+ I++
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ + G K ++ + LL SR K + + Q G + + Y I N
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 509
Query: 520 QLENAVLVMEESLHK 534
+LE A+ + +S+ K
Sbjct: 510 ELEKAI-ALYQSMRK 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 2/279 (0%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
YN +I ++ V Q + + M + PD T+D+L+ GRAG+ A+ + D+++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
S YN +I+ S G+ EA++ + + N PD+ T+ ++SA+ R+ +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK--RARKAGCKISLSAYKL 475
AL + M G + P T T I L G A+ ++ R ++A C+ + +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++ S G+ ++E M G ++ Y ++ G A+ V+ + G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
P + Y+ L N S + +A ++FL ++ R N
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 424
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 161/378 (42%), Gaps = 7/378 (1%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
+ +++ L + +A+ +F + K+ D+ ++ I+ K I+ +
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK-R 274
+ EG+ N+ + + + A+ + G+ ++ G D S LL + R
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 275 SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
+A + K + NV TYN +I + G + + +I M +DG P+ +
Sbjct: 405 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 464
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
+LL R+ + + + + L T+ YN+ I ++I+ +L++AI Y+ +
Sbjct: 465 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF---GPP 451
D T+T LIS + K +A+ L EM I P T V S + LC++ G
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-PLTKEVYSSV--LCAYSKQGQV 581
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A I+ + + AGC+ + AY +L + K G ++ EM+ +G D +
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 512 INGLCNIGQLENAVLVME 529
+ GQ N ++M+
Sbjct: 642 MRAFNKGGQPSNVFVLMD 659
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 167/415 (40%), Gaps = 40/415 (9%)
Query: 169 LGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLET 228
+ G A+ + + IKQ I D+ SY +L + G+ + ++ +R E N+ T
Sbjct: 370 MSGTALSVLGD--IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 427
Query: 229 LSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA-ANSYFNAV 287
+ + D + +A++IF E+ G + S+ LL C RS + ++ +A
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAA 486
Query: 288 KGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
+ + I N A YN+ I + ++ + + ++M + D TF L+ G R +
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+A+ + + L VY++++ + G + EA + + C+PD+ YT +
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK--- 463
+ A+ + K A E+ EM GI P + ++ + G P ++ R+
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 464 -----------AGC---------------------KISLSAYKLLLMRLSRFGKCGMLLN 491
+ C +S+ +L + GK ++
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
++ ++ SG +++ Y ++ L +G + V+E G PS +Y +
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 781
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 1/194 (0%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNL-VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
F L++ L R G IE + +F + ++K+Y +YN MI +D+A + +
Sbjct: 110 FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM 169
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+C PD +TY LI+A +A + A+ ++D+ML I PS T + I S G
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A+ + K+ G L + ++L + L+ +E M+ + D + I
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 512 INGLCNIGQLENAV 525
I L +GQ A+
Sbjct: 290 IYCLSKLGQSSQAL 303
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 174/414 (42%), Gaps = 38/414 (9%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+YN ++ A G L++ + + G+ +L T +IV ++ KA+ F
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK---IPFNVATYNTIIAGWSKIG 309
+ DT + N+++ CL K A FN+++ K +V T+ +I+ +S G
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 310 QVCQMKKILEAMV-----------------------------------EDGFTPDCSTFD 334
++ + + EAMV ++G PD ++
Sbjct: 203 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
LL GR+ + A ++F + ++ YNA+I + S G L EA++ +R + +
Sbjct: 263 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 322
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAA 454
P++ + L++A +++K + +L +GI +T S I + A
Sbjct: 323 GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
+ +Y+ RK K + +L+ R K ++ +EM++ EVY ++
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 442
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
GQ+ A + + G P + Y+ + + AS K +A +LFL+++A
Sbjct: 443 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 12/375 (3%)
Query: 166 RGNLGGEAMVIFF---NWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGI 222
R N +A +FF W+ K D +Y+ ++ A G+ + + ++ D+ I
Sbjct: 23 RHNWVDQARGLFFEMQKWSCK-----PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAI 77
Query: 223 TVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS 282
+ T + + + + +A+++ + G G D + N++L A S
Sbjct: 78 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 137
Query: 283 YFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT--PDCSTFDSLLQG 339
YF +KG K+ + T+N II SK+GQ Q + +M E PD TF S++
Sbjct: 138 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 197
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
G IE+ +F+ +V + YNA++ + G A+ + N PD
Sbjct: 198 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 257
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ +YT L++++ ++R+ A E+ M + P+ T + I+ S G A+ I++
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 317
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ + G K ++ + LL SR K + + Q G + + Y I N
Sbjct: 318 QMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAA 377
Query: 520 QLENAVLVMEESLHK 534
+LE A+ + +S+ K
Sbjct: 378 ELEKAI-ALYQSMRK 391
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 2/279 (0%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
YN +I ++ V Q + + M + PD T+D+L+ GRAG+ A+ + D+++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
S YN +I+ S G+ EA++ + + N PD+ T+ ++SA+ R+ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK--RARKAGCKISLSAYKL 475
AL + M G + P T T I L G A+ ++ R ++A C+ + +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
++ S G+ ++E M G ++ Y ++ G A+ V+ + G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNEN 574
P + Y+ L N S + +A ++FL ++ R N
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 292
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 161/378 (42%), Gaps = 7/378 (1%)
Query: 156 SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLR 215
+ +++ L + +A+ +F + K+ D+ ++ I+ K I+ +
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 212
Query: 216 DLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK-R 274
+ EG+ N+ + + + A+ + G+ ++ G D S LL + R
Sbjct: 213 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272
Query: 275 SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
+A + K + NV TYN +I + G + + +I M +DG P+ +
Sbjct: 273 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 332
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
+LL R+ + + + + L T+ YN+ I ++I+ +L++AI Y+ +
Sbjct: 333 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 392
Query: 395 NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF---GPP 451
D T+T LIS + K +A+ L EM I P T V S + LC++ G
Sbjct: 393 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-PLTKEVYSSV--LCAYSKQGQV 449
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
A I+ + + AGC+ + AY +L + K G ++ EM+ +G D +
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 512 INGLCNIGQLENAVLVME 529
+ GQ N ++M+
Sbjct: 510 MRAFNKGGQPSNVFVLMD 527
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 167/415 (40%), Gaps = 40/415 (9%)
Query: 169 LGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLET 228
+ G A+ + + IKQ I D+ SY +L + G+ + ++ +R E N+ T
Sbjct: 238 MSGTALSVLGD--IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT 295
Query: 229 LSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA-ANSYFNAV 287
+ + D + +A++IF E+ G + S+ LL C RS + ++ +A
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVLSAA 354
Query: 288 KGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
+ + I N A YN+ I + ++ + + ++M + D TF L+ G R +
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+A+ + + L VY++++ + G + EA + + C+PD+ YT +
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK--- 463
+ A+ + K A E+ EM GI P + ++ + G P ++ R+
Sbjct: 475 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Query: 464 -----------AGC---------------------KISLSAYKLLLMRLSRFGKCGMLLN 491
+ C +S+ +L + GK ++
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 594
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
++ ++ SG +++ Y ++ L +G + V+E G PS +Y +
Sbjct: 595 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 649
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%)
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
++K+Y +YN MI +D+A + + +C PD +TY LI+A +A +
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A+ ++D+ML I PS T + I S G A+ + K+ G L + ++
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
L + L+ +E M+ + D + II L +GQ A+
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 171
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%)
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
+Q I D++ + +LR K D + + +R GI N E + V + RA +
Sbjct: 621 EQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPL 680
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTII 302
+ F +GF +T + NVLL K + N F K +V +YNTII
Sbjct: 681 DELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTII 740
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
A + K M ++ M DGF+ +++LL G+ ++E I + +
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+ YN MI+ + G +DE + L + PD+ +Y LI A+ V +A+ +
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 423 LDEMLGQGIVPSTGTVTSFIEPL 445
+ EM G+ I+P T T+ + L
Sbjct: 861 VKEMRGRNIIPDKVTYTNLVTAL 883
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 160/383 (41%), Gaps = 5/383 (1%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
K +N ++ A KK + K + G+ N+ T+ ++ + V +A
Sbjct: 208 KSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFA 267
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
F + +FG C++ +++ R + +A + ++ + + ++ +S+
Sbjct: 268 FSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQ 327
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G++ + IL +M GF+P+ +++L+ G G+ ++E A +F L + + Y
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSY 387
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+MI + + +EA YY+ L P+ LI+ K A++ +++M G
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
Query: 429 QGIVPST--GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
G S+ G + E + G + K + +++ +++ L+M + G
Sbjct: 448 IGCQYSSILGIILQAYEKV---GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMV 504
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
L + E + + + +Y +I GQL +AV + + + I S +
Sbjct: 505 DDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTM 564
Query: 547 YNKLLASNKVERAYKLFLKIKAA 569
+ + A KL+L +K++
Sbjct: 565 IDIYTVMGEFSEAEKLYLNLKSS 587
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 110/263 (41%), Gaps = 7/263 (2%)
Query: 256 GFGCDTES-LNVLLQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKIGQVCQ 313
G GC S L ++LQ K + + I N ++++++ + K G V
Sbjct: 447 GIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDD 506
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
+L + + L+ +G++ DA+KI+++ +E D + + + MI
Sbjct: 507 CLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMID 566
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA---LEMLDEMLGQG 430
+ +G+ EA K Y L S+ D ++ ++ ++KA + +A LE++DE +
Sbjct: 567 IYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ--KD 624
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
IVP + +Y R RK+G + Y ++ +R L
Sbjct: 625 IVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELS 684
Query: 491 NIWEEMQESGYSSDMEVYEYIIN 513
+EEM G++ + + +++
Sbjct: 685 GTFEEMIRYGFTPNTVTFNVLLD 707
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/381 (17%), Positives = 156/381 (40%), Gaps = 5/381 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+I +YN ++ GK ++ + L G+ + + + +G RA +A +
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
+ G+ ++ +L L+ K A + G + I+ + K+G
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVG 467
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
++ + +L+ + + ++F SL+ + G ++D L + +D E+ +Y+
Sbjct: 468 KIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYH 527
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+I + G L +A+K Y + ++ + ++ + +I + + ++A ++ +
Sbjct: 528 LLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSS 587
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM- 488
G+V + + G A + + + K + L L + KC +
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ--KDIVPDVYLFRDMLRIYQKCDLQ 645
Query: 489 --LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
L +++ +++SG + E+Y +IN L+ EE + GF P+ + ++ L
Sbjct: 646 DKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 547 YNKLLASNKVERAYKLFLKIK 567
+ + ++ +LFL K
Sbjct: 706 LDVYGKAKLFKKVNELFLLAK 726
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 3/224 (1%)
Query: 212 KMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCL 271
K L D+ EG ++ + DGL++ + V + +++F + G D + +VL++ L
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKAL 624
Query: 272 CKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD 329
CK A+ FN + KG P VATYN++I GW K G++ + + M ED PD
Sbjct: 625 CKACRTMEADILFNEMVSKGLKP-TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPD 683
Query: 330 CSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR 389
T+ SL+ GL +GR +A+ ++ + KD + A+I G EA+ Y+R
Sbjct: 684 VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFR 743
Query: 390 CLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP 433
+ +PD Y L+S+F+ + + + EM+ +G P
Sbjct: 744 EMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 158/396 (39%), Gaps = 44/396 (11%)
Query: 210 MLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQ 269
++K+L+D + I + ++LSIV + LV+A +V A+ + + + G N +++
Sbjct: 424 IVKLLKD-HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIE 482
Query: 270 CLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
+CK + +K + + T N I ++ +L+ M GF P
Sbjct: 483 GMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
L++ L GR DA K D++ + ++ A I I +D ++ +
Sbjct: 543 WIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF 602
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV---------- 438
R + +N PD+ Y LI A KA + +A + +EM+ +G+ P+ T
Sbjct: 603 RDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKE 662
Query: 439 -------------------------TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
TS I LC+ G P A+ + + C + +
Sbjct: 663 GEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITF 722
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ L + G G L + EM+E D VY +++ + + + E +H
Sbjct: 723 MALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVH 782
Query: 534 KGFCPSRLIYSKLYNKLLASN---KVERAYKLFLKI 566
KG R S N +LA N V+ AYK K+
Sbjct: 783 KG----RFPVSVDRNYMLAVNVTSDVDYAYKFLSKL 814
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 168/386 (43%), Gaps = 32/386 (8%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D H +++ + K +D +++ L I +N +T ++ G V+ R+ KA Q+F
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS-YFNAVKGKIPFNVATYNTIIAGWSKI 308
G D +VL+ LCK + A S Y + IP + ++ +S
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFS-- 364
Query: 309 GQVCQMKKILEAMVEDGFTPDCS-TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
+ ++ +I E ++ D + SL +G R + +A NL
Sbjct: 365 -EESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNL----------- 412
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCD---PDIDTYTKLISAFIKARKVADALEMLD 424
+ N+ S G + E +K LL ++ PD D+ + +I+ +KA KV A+ +L
Sbjct: 413 ----MGNYESDG-VSEIVK----LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH 463
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
+++ G++P + IE +C G ++ + + AG + S + L+
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAE-- 521
Query: 485 KCGML--LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
+C + L++ ++M+ G+ ++ +++ LC G+ +A +++ +GF +
Sbjct: 522 RCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVA 581
Query: 543 YSKLYNKLLASNKVERAYKLFLKIKA 568
+ + L+ + V+R +LF I A
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICA 607
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 176 IFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
+FFNWA KQ D+++YN + L + + N ++V D
Sbjct: 91 LFFNWASKQEGYRNDMYAYNAMASILSRAR------------------QNASLKALVVDV 132
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPF 293
L + F + FGF ++CL V A+S F+ V+ G
Sbjct: 133 LNS--------RCFMSPGAFGF---------FIRCLGNAGLVDEASSVFDRVREMGLCVP 175
Query: 294 NVATYNTIIAGWSK--IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
N TYN ++ SK V ++ L+ M + GF D T +LQ G+ E AL
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+F+ ++ + + L+ + ++ +F G +D+A + L + + TY LI F+
Sbjct: 236 VFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFV 294
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
K ++ A ++ ++M G+ I LC A+ +Y +++G
Sbjct: 295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 24/244 (9%)
Query: 318 LEAMVEDGFTPDC----STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS-VYNAMI 372
L+A+V D C F ++ LG AG +++A +FD + E + + YN ++
Sbjct: 125 LKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184
Query: 373 -----SNFISVGDLDEAIKYYRCLLSNNCDPDID--TYTKLISAFIKARKVADALEMLDE 425
SN SV ++ +K R +C D T T ++ + K AL + +E
Sbjct: 185 EAISKSNSSSVELVEARLKEMR-----DCGFHFDKFTLTPVLQVYCNTGKSERALSVFNE 239
Query: 426 MLGQGIVP---STGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
+L +G + ST V SF C +G A + + + +++ Y +L+ +
Sbjct: 240 ILSRGWLDEHISTILVVSF----CKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVK 295
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
+ ++E+M+ G ++D+ +Y+ +I GLC LE A+ + E G P R I
Sbjct: 296 ESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGI 355
Query: 543 YSKL 546
KL
Sbjct: 356 LGKL 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 108/246 (43%), Gaps = 14/246 (5%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M K++ ++N IL A K + +++ D +E V T S + DG V+ KA
Sbjct: 915 MPHKNLVTWNSILDAYAKSGDV-VSARLVFDEMSERDVV---TWSSMIDGYVKRGEYNKA 970
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS----YFNAVKGKIPFNVATYNTI 301
++IF G E V + C C +H+ A N + + +P V ++
Sbjct: 971 LEIFDQMMRMGSSKANEVTMVSVICAC--AHLGALNRGKTVHRYILDVHLPLTVILQTSL 1028
Query: 302 IAGWSKIGQVCQMKKIL-EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
I ++K G + + A V++ D +++++ GL G I ++L++F + E
Sbjct: 1029 IDMYAKCGSIGDAWSVFYRASVKE---TDALMWNAIIGGLASHGFIRESLQLFHKMRESK 1085
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
+ + +++ G + EA +++ L + +P + Y ++ +A V DA
Sbjct: 1086 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 1145
Query: 421 EMLDEM 426
+ + EM
Sbjct: 1146 DFISEM 1151
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 184/420 (43%), Gaps = 29/420 (6%)
Query: 117 KVVADLFLLPEEKLRGVFLQKLN-GKSAIESALANT-GVDLSLDVVAKTLY-RGNLGGEA 173
K++ D F P LQ+L+ G S + L N D + LY + L A
Sbjct: 41 KLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHA 100
Query: 174 MVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVA 233
+F + M +D+ + ++ + + ++ ++R +GI TL +
Sbjct: 101 RKVF------EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML 154
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF 293
G++ ++ + + F +GF CD +N +L CK HV A F+ ++ +
Sbjct: 155 SGVLEITQL-QCLHDFAVI--YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR--- 208
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ ++NT+I+G++ +G + ++ K+L M DG PD TF + L G +E +
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+V+ + ++ + A+I+ ++ G + + YR +L + D+ +T +IS ++
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEAS---YR-VLETIPNKDVVCWTVMISGLMRL 324
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ AL + EML G S+ + S + G ++ + G + A
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 474 KLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
L ++ + KCG L L I+E M E D+ + II+G L A+L+ EE
Sbjct: 385 NSL---ITMYAKCGHLDKSLVIFERMNE----RDLVSWNAIISGYAQNVDLCKALLLFEE 437
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/388 (18%), Positives = 160/388 (41%), Gaps = 30/388 (7%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL--SIVADGLVRAQRVY 243
M +D+ S+N ++ + +LK+L +R +G+ + +T S+ G + +
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIA 303
+ + + GF D L+ K A+ + K +V + +I+
Sbjct: 265 RMLHC--QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK---DVVCWTVMIS 319
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G ++G+ + + M++ G S++ + G + + ++ Y L
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+T N++I+ + G LD+++ + + D+ ++ +IS + + + AL +
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFE----RMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 424 DEMLGQGIVP-STGTVTSFIEPLCSFGPPHAAMMIY---KRARKAGCKISLSAYKLLLMR 479
+EM + + + TV S ++ S G +I+ R+ C + +A
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL------ 489
Query: 480 LSRFGKCGMLLNIWEEMQESGYSS----DMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
+ + KCG L E + + S D+ + +I G G+ + A+ + E LH G
Sbjct: 490 VDMYSKCGYL-----EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLF 563
P+ +I+ + + + V++ K+F
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIF 572
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 152/342 (44%), Gaps = 6/342 (1%)
Query: 228 TLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV 287
+L+I+ L+ + V KA + F +T GF + L ++CL + V A +N +
Sbjct: 115 SLNILFGALLDGKAV-KAAKSFLDTT--GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVL 171
Query: 288 KG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
K I +V T N+++ G K ++ + ++ + MVE F D L++ L G +
Sbjct: 172 KDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDV 229
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+ ++ +++ VY +IS F +G+ + +++ N P + Y K+
Sbjct: 230 SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKI 289
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
I +K +A + + +G P T+ I C G +A ++ K G
Sbjct: 290 IKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM 349
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ + AY +++ + G+ ++ + EM +GY M +I G C+ G+ + A
Sbjct: 350 RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFE 409
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+ + G P+ + Y+ L NKVE+ KL+ ++KA
Sbjct: 410 IFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 147/366 (40%), Gaps = 38/366 (10%)
Query: 198 LRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGF 257
++ L ++ ++ +++ L+ GI+ ++ T + V G ++A+++ + ++ E F
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 258 GCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKK 316
D+E + L++ LC V +K + Y +I+G+ +IG M +
Sbjct: 212 --DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 317 ILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
+L M+ P + +++GL + +A IF NL +K Y + VY MI F
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 377 SVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
G L A K + ++ P+ Y +I K +++ +EML G +
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 437 TVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
+ + I+ CS G A I+K M
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFK-----------------------------------NM 414
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKV 556
E+G + + Y +I G C ++E + + +E G PS + Y+ L L S+ V
Sbjct: 415 SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSV 474
Query: 557 ERAYKL 562
+ L
Sbjct: 475 ATSLNL 480
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 156/347 (44%), Gaps = 29/347 (8%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+++++++ K ID + ++R LR+ GI + T + + + R + +++
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV- 223
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQ 313
FG D S++ + + GKI N T+N+++ + + G+
Sbjct: 224 ---FGLDDVSVDEAKKMI-----------------GKIKPNATTFNSMMVSFYREGETEM 263
Query: 314 MKKILEAMVED-GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+++I M E+ G +P+ +++ L++ G + +A K+++ + + V + YN MI
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
S ++ +A + +R + + TY L++ + KA V L + EM +G
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 433 PSTGTVTSFIEPLCSFGPPH----AAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
T+ + +E LC AA ++ R+A S + Y+LL+ RL GK
Sbjct: 384 ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDR 443
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV---MEESL 532
LNI EM G+ E Y I+G +G E + L+ M ESL
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESL 490
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ +N+M+ +F G+ + + +R + C P++ +Y L+ A+ +++A ++ +
Sbjct: 246 TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWE 305
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM +G+V + I LCS A +++ G + + Y+ L+ + G
Sbjct: 306 EMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN--IGQ--LENAVLVMEESLHKGFCPSR 540
L ++ EM+ G+ +D E ++ GLC+ GQ +E A +V + F PSR
Sbjct: 366 DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSR 425
Query: 541 LIYSKLYNKLLASNKVERA 559
Y L +L K++RA
Sbjct: 426 NCYELLVKRLCEDGKMDRA 444
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 350 LKIFDNLVEKDYVLETS---VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
LK+F +L+ K Y S V++ +I + + ++D A+ R L S + I T L
Sbjct: 145 LKVFRSLI-KSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNAL 203
Query: 407 ISAFIKARKVADALEMLDEMLG-------------QGIVPSTGTVTSFIEPLCSFGPPHA 453
I+ + R ++ +M E+ G I P+ T S + G
Sbjct: 204 ITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEM 263
Query: 454 AMMIYKR-ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
I++ + GC ++ +Y +L+ G +WEEM+ G D+ Y +I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 513 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
GLC+ ++ A + + KG + L Y L N + V+ ++ ++K
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 173/417 (41%), Gaps = 21/417 (5%)
Query: 133 VFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWA-IKQPMIPKDI 191
++ Q+ + S + S L++T L+ + + L + FF ++ P
Sbjct: 53 LYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTS 112
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
+ N +L +G + +D ++ +++ G+ VN +T IV L A+ + K + F
Sbjct: 113 TTSNKMLAIIGNSRNMDLFWELAQEIGKRGL-VNDKTFRIVLKTLASARELKKCVNYFHL 171
Query: 252 TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQV 311
FG+ + E++N ++ LCK V A F +K I + TY T+I G+ +G +
Sbjct: 172 MNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDL 231
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK-DYVLETSVYNA 370
+ K+ M+++GF D +++ L + + ++A K+F +V K L+ Y
Sbjct: 232 IEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRV 291
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
MI G +D A K + + D T+ LI + R+V +A +++ +
Sbjct: 292 MIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN-- 349
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM-RLSRFGKCGML 489
P I+ L A ++++ + GC+ + Y +LL L R G+
Sbjct: 350 --PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGR---- 403
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
G + + G+ G+ +E +L +G R YSK
Sbjct: 404 ---------KGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKF 451
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 161/392 (41%), Gaps = 31/392 (7%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D YNV AL K ++ ++L++++ GI ++ + + DG +V A+ +
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
G D + NVL+ L + H + +K + P A N++I I
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI-----IE 501
Query: 310 QVCQMKKILEAMVEDGFT------PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
+C +K+ EA ED F+ P+ S ++G AG + A K F V +Y L
Sbjct: 502 GLCFARKVKEA--EDFFSSLEQKCPENKA--SFVKGYCEAGLSKKAYKAF---VRLEYPL 554
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
SVY + + G L++A + + + +P K+I AF K V +A +
Sbjct: 555 RKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLF 614
Query: 424 DEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
D M+ +G++P T T I C A +++ ++ G K + Y +LL R +
Sbjct: 615 DTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Query: 484 -----------GKCG--MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
G+ G + E +G D+ Y +I+ C + LE A + +
Sbjct: 675 DPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDR 734
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
+ G P + Y+ L + ++ A L
Sbjct: 735 MIDSGLEPDMVAYTTLISSYFRKGYIDMAVTL 766
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 166/419 (39%), Gaps = 50/419 (11%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
DI + N ++ + + I ++ + + L+ G+ N T +IV L R + +A +
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 250 GNTEE-FGFGC---------DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYN 299
E FG+ +TE L+ L R ++ A AV G
Sbjct: 240 IENESVFGYKTFINGLCVTGETEKAVALILELIDRKYL--AGDDLRAVLG---------- 287
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
++ G+ ++ + ++ M E GF D +++ + + +AL D ++ K
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ + + ++ + + EA++ ++ N D Y A K +V +A
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
E+L EM +GIVP T+ I+ C G A+ + G L Y +L+
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC---NIGQLENAVLVMEE------ 530
L+R G +L I+E M+ G + II GLC + + E+ +E+
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK 527
Query: 531 -SLHKGFCPSRL------------------IYSKLYNKLLASNKVERAYKLFLKIKAAR 570
S KG+C + L +Y KL+ L +E+A+ + K+ A R
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 3/246 (1%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET---SVYNAMISNFISVGDLDEAIKYYR 389
+ + + GL G E A+ + L+++ Y+ +V ++ F + + A
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 390 CLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
+ D+ +I + K + +AL LD+MLG+G+ + V+ ++ C
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 450 PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
A+ +K R + Y + LS+ G+ + +EM++ G D+ Y
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+I+G C G++ +A+ +++E + G P + Y+ L + L + E +++ ++KA
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 570 RSNENA 575
NA
Sbjct: 488 GPKPNA 493
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 267 LLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
++ CK ++VR A F+ + +G IP ++ TY +I + ++ ++ + + + E M +
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIP-DLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 325 GFTPDCSTFDSLLQGL--------------GRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
G PD T+ LL G G+ A ++ L+ Y
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTV 714
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+I + +L++A + + ++ + +PD+ YT LIS++ + + A+ ++ E+ +
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKY 774
Query: 431 IVPS 434
+PS
Sbjct: 775 NIPS 778
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 152/339 (44%), Gaps = 7/339 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ SY ++ + G+ + + R +++ G + T I+ V + +A ++F
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 250 G---NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+ ++ D + ++++ K + A F+++ GK +P + TYN++++
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ +V KI + M PD ++ L++ GRA R E+AL +F+ +++
Sbjct: 293 TSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN ++ F G +++A ++ + + PD+ +YT ++SA++ A + A +
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ G P+ T + I+ M +Y++ R +G K + + ++ R
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 469
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G L ++EM+ G D + +++ +LE A
Sbjct: 470 FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 6/278 (2%)
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
F+ + +I + K+G +++L + + G TP+ ++ +L++ GR G+ +A I
Sbjct: 137 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 196
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN---CDPDIDTYTKLISA 409
F + Y ++ F+ EA + + LL PD Y +I
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 256
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
+ KA A ++ M+G+G+ ST T S + S+ IY + +++ +
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPD 313
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ +Y LL+ R + L+++EEM ++G + Y +++ G +E A V +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
P Y+ + + + ++ +E A K F +IK
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
GF D T+ ++L G AGRI+ +F + EK +++T Y ++I S GD+D A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEP 444
++ + + N C+P + +YT + +V +A E+ EML + P+ T T +E
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
L + G A+ I+ + ++ G + +A +L+ + +FG+ + + M+E+G
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T++ + + G++ M + M E G D T+ SL+ + +G ++ A+++++ +
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 357 VEKDYVLETSV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+D E +V Y A + + G ++EA + Y+ +L + P+ TYT L+ +
Sbjct: 184 --RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATG 241
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
K +AL++ +M G+ P I FG
Sbjct: 242 KCEEALDIFFKMQEIGVQPDKAACNILIAKALKFG 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 173/416 (41%), Gaps = 21/416 (5%)
Query: 106 RNNQSNKLEESKVVADLFLLPEEKLRGVF--LQKLNGKSAIESALANTGVDLSLDVVAKT 163
R +Q KL +++ + D + + + ++ L+ N SA E L + GV ++ +
Sbjct: 37 RFSQKPKLVKTQTLPDPSVYTRDIVSNIYNILKYSNWDSAQEQ-LPHLGVRWDSHIINRV 95
Query: 164 LYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
L + + + +FFNWA + D +Y +L G+ I M + ++ +G+
Sbjct: 96 L-KAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVL 154
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS- 282
++ T + + + + V A++++ + G S ++ L V A
Sbjct: 155 IDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEV 214
Query: 283 YFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
Y ++ ++ N TY ++ G+ + I M E G PD + + L+ +
Sbjct: 215 YKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALK 274
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS--NNCDPDI 400
G ++ + E VL ++ + + G+ D+ ++ +S + C DI
Sbjct: 275 FGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDI 334
Query: 401 DTY-------------TKLISAFIKARKVADALE-MLDEMLGQGIVPSTGTVTSFIEPLC 446
D +++IS+ + ++ A++ +L++M + I + V++ IE C
Sbjct: 335 DETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNC 394
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYS 502
A + + + + G + SAY L+ R + ++ + +EM ++ +S
Sbjct: 395 DRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHS 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%)
Query: 402 TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRA 461
TYT ++ F +A ++ + M +G++ T T TS I + S G AM +++
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 462 RKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQL 521
R GC+ ++ +Y + L G+ +++EM S S + Y ++ L G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 522 ENAVLVMEESLHKGFCPSR 540
E A+ + + G P +
Sbjct: 244 EEALDIFFKMQEIGVQPDK 262
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 150/359 (41%), Gaps = 3/359 (0%)
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSI 231
EA+ +F + ++ D SY+ ++ L K + D + ++LR +R +
Sbjct: 64 EALSLFHQY--QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-K 290
+ +A V KAI +F F +SLN L+ L + A S+F+ K +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
+ N ++N +I G+ K+ + M+E P T++SL+ L R + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
+ +++++K + ++ G+ +EA K + C P + Y L+S
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
K ++ +A +L EM + I P + LC+ A + + GCK +
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ Y++++ R LN+ M S + + ++ GL G L++A V+E
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 1/301 (0%)
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTII 302
+A+ +F +E GF D S + L+ L K + A + V+ + + + + +I
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
+ K G V + + + + ++L+ L G +E A FD +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+ +N +I F+ D + A K + +L P + TY LI + + A +
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
L++M+ + I P+ T ++ LC G + A + GCK L Y +L+ L +
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 483 FGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLI 542
G+ + EM++ D+ +Y ++N LC ++ A V+ E KG P+
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 543 Y 543
Y
Sbjct: 364 Y 364
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 10/250 (4%)
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
S F L+Q G+AG ++ A+ +F + D V N +I+ + G+L++A ++
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC---S 447
P+ ++ LI F+ A ++ DEML + PS T S I LC
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 448 FGPPHAAM--MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
G + + MI KR R + + LL+ L G+ + +M+ G +
Sbjct: 237 MGKAKSLLEDMIKKRIRP-----NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLK 565
Y +++ L G+++ A L++ E + P +IY+ L N L +V AY++ +
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 566 IKAARSNENA 575
++ NA
Sbjct: 352 MQMKGCKPNA 361
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 109/267 (40%), Gaps = 4/267 (1%)
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
+D+R +V + +I+ G + A ++F E + N L+ LC+
Sbjct: 178 KDMRLRPNSV---SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 275 SHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
+ A S + +K +I N T+ ++ G G+ + KK++ M G P +
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
L+ LG+ GRI++A + + ++ + +YN ++++ + + EA + +
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
C P+ TY +I F + L +L+ ML P+ T + L G
Sbjct: 355 KGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDH 414
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRL 480
A + + K A++ LL L
Sbjct: 415 ACFVLEVMGKKNLSFGSGAWQNLLSDL 441
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 19/363 (5%)
Query: 167 GNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK-------KKFIDFMLKMLRDLRT 219
GNL +AM IF +K+ ++N +++ GK + +D ML R
Sbjct: 403 GNLD-QAMKIFEK--MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML------RD 453
Query: 220 EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRA 279
E + N T +I+ +++ +A I + +G D + N L + +
Sbjct: 454 EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 513
Query: 280 ANSYF--NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLL 337
A + K+ NV T TI+ G+ + G++ + + M E G P+ F+SL+
Sbjct: 514 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Query: 338 QGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD 397
+G ++ ++ D + E + ++ +++ + SVGD+ + Y +L D
Sbjct: 574 KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 633
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
PDI ++ L + +A + A ++L++M G+ P+ T I CS G AM +
Sbjct: 634 PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Query: 458 YKR-ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
YK+ G +L+ Y+ L+ + + ++M+ + + I +G
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWK 753
Query: 517 NIG 519
+IG
Sbjct: 754 SIG 756
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 2/266 (0%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+V + ++ G + G+ + I ++E+G P T+ +L+ L R L +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + +T ++NA+I+ G+LD+A+K + + + C P T+ LI + K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 414 RKVADALEMLDEML-GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
K+ ++ +LD ML + + P+ T ++ C+ A I + + G K +
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 473 YKLLLMRLSRFGK-CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEES 531
+ L +R G C I M + ++ I+NG C G++E A+
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 532 LHKGFCPSRLIYSKLYNKLLASNKVE 557
G P+ +++ L L N ++
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMD 583
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 152/339 (44%), Gaps = 7/339 (2%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ SY ++ + G+ + + R +++ G + T I+ V + +A ++F
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 250 G---NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+ ++ D + ++++ K + A F+++ GK +P + TYN++++
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 299
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ +V KI + M PD ++ L++ GRA R E+AL +F+ +++
Sbjct: 300 TSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
YN ++ F G +++A ++ + + PD+ +YT ++SA++ A + A +
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
+ G P+ T + I+ M +Y++ R +G K + + ++ R
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN 476
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
G L ++EM+ G D + +++ +LE A
Sbjct: 477 FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 8/279 (2%)
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
F+ + +I + K+G +++L + + G TP+ ++ +L++ GR G+ +A I
Sbjct: 144 FSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI 203
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN---CDPDIDTYTKLISA 409
F + Y ++ F+ EA + + LL PD Y +I
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYM 263
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM-MIYKRARKAGCKI 468
+ KA A ++ M+G+G+ ST T S L SF + + IY + +++ +
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQP 319
Query: 469 SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
+ +Y LL+ R + L+++EEM ++G + Y +++ G +E A V
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 529 EESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+ P Y+ + + + ++ +E A K F +IK
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 132/291 (45%), Gaps = 4/291 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y I+ A GK+K ++ +LR G T +L+T + + + +A IF
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIA--GWSKIGQV 311
G ES+N+LL LC + ++ + F ++ + ++ +++ G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQ-DMGFKISKSSILLMLDAFARAGNI 873
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
++KKI +M G+ P + +++ L + R+ DA + + E ++ +E +++N+M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+ + ++ D + ++ Y+ + +PD TY LI + + R+ + ++ +M G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSR 482
P T S I A +++ G K+ S Y +M++SR
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH-TMMKISR 1043
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 7/324 (2%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTII 302
A++IF E G + N ++ + A +A++ G +P ++ ++NT+I
Sbjct: 210 AVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVP-DLISFNTLI 267
Query: 303 AGWSKIGQVCQ--MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
K G + ++L+ + G PD T+++LL R ++ A+K+F+++
Sbjct: 268 NARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
+ YNAMIS + G EA + + L PD TY L+ AF + R
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK-AGCKISLSAYKLLLMR 479
E+ +M G T + I G A+ +YK + +G Y +L+
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
L + + + EM + G ++ Y +I G G+ E A L G P
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 540 RLIYSKLYNKLLASNKVERAYKLF 563
L YS + + LL N+ +A+ L+
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLY 531
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D +YN +L A + +D +K+ D+ +L T + + R +A ++F
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSK 307
E GF D + N LL + + + ++ K+ F + TYNTII + K
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KMGFGKDEMTYNTIIHMYGK 414
Query: 308 IGQV---CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
GQ+ Q+ K ++ + G PD T+ L+ LG+A R +A + +++
Sbjct: 415 QGQLDLALQLYKDMKGL--SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
Y+A+I + G +EA + C+L + PD Y+ ++ ++ + A +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 425 EMLGQGIVPS 434
+M+ G PS
Sbjct: 533 DMISDGHTPS 542
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 153/355 (43%), Gaps = 14/355 (3%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLR-TEGITVNLETLSIVADGLVRAQRVYKAIQ 247
KD +YN I+ GK+ +D L++ +D++ G + T +++ D L +A R +A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGW 305
+ + G ++ + L+ K A F+ + G P N+A Y+ ++
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA-YSVMLDVL 518
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ + + + M+ DG TP + ++ ++ GL + R +D K ++ E
Sbjct: 519 LRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL-----C 573
Query: 366 SVYNAMISNFISVGD-LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ IS+ + G+ D A + + ++N + + DT ++ ++ + + ++A E+L
Sbjct: 574 GMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELL- 632
Query: 425 EMLGQGIVPSTGTVT-SFIEPLCSFGPPHAAMMIY--KRARKAGCKISLSAYKLLLMRLS 481
E L + S +T + I C AA+ Y C S + Y+ LL
Sbjct: 633 EFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCV 692
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
++ +++ SG + V + ++ C +G E A V+ ++ KGF
Sbjct: 693 ANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGF 747
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 124/276 (44%), Gaps = 7/276 (2%)
Query: 168 NLGGEAMVIFFNWAI----KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGIT 223
NL G+A + +W + + +I +Y ++ A ++ + ++ L+ +G+
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
++ + + + RA Y A +IF + G D S N+++ + A +
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 284 FNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLG 341
F +K G P + ++ +++ +SK V + + I++ M E+G PD +S+L G
Sbjct: 392 FEEMKRLGIAP-TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 342 RAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDID 401
R G+ KI + + S YN +I+ + G L+ + + L N PD+
Sbjct: 451 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVV 510
Query: 402 TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
T+T I A+ + + LE+ +EM+ G P GT
Sbjct: 511 TWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 133/310 (42%), Gaps = 8/310 (2%)
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANS-YFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMK 315
F D N+L+ ++ + A S Y ++ + TY +I + G + + +
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 316 KILEAMVEDGFTPD---CSTFDSLLQGL-GRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
+L M +P + +++ ++GL R G E+A+ +F + T YN M
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I+ + + K Y + S+ C P+I TYT L++AF + A E+ +++ G+
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
P + +E G P+ A I+ + GC+ ++Y +++ R G
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK---LYN 548
++EEM+ G + M+ + +++ + +++E G P + + LY
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 549 KLLASNKVER 558
+L K+E+
Sbjct: 451 RLGQFTKMEK 460
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 148/354 (41%), Gaps = 11/354 (3%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGI---TVNLETLSIVADGLV-RAQRVYKAIQI 248
+Y ++++A I+ +L +++ + T+ + + +GL+ R +AI +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSK 307
F + TE+ N+++ K S + + ++ + N+ TY ++ +++
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + ++I E + EDG PD +++L++ RAG A +IF + + +
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
YN M+ + G +A + + P + ++ L+SA+ KAR V ++ EM
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ P T + S + G I C +S Y +L ++ +GK G
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL---INIYGKAG 488
Query: 488 MLLNIWE---EMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
L I E E++E + D+ + I + V EE + G P
Sbjct: 489 FLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAP 542
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 36/269 (13%)
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVED-GFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
V ++N +++ + ++ + K + + E G TPD T++++++ L R G ++D L IF
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ L + + + +N ++ F E + + + S N P+I +Y + +
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+K DAL ++D M +GI P T + I +AY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALI----------------------------TAY 308
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
++ L KC + EM+E G + D Y +I LC G L+ AV V EE++
Sbjct: 309 RVD-NNLEEVMKC------YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKL 562
+Y + +L+ + K++ A +L
Sbjct: 362 HKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 15/306 (4%)
Query: 189 KDIHS-YNVILRALGK-KKF--IDFML---KMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+ +H Y+ +R L + KKF ID +L K D+++E + + L + G+ A+
Sbjct: 84 RQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS-GM--AEH 140
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYN 299
+K +F E +S N LL + A F + K I ++ TYN
Sbjct: 141 AHK---LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+I + G + + I E + ++GF PD +F++LL+ R + +I+D + K
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
+ YN+ + +A+ + + PD+ TY LI+A+ + +
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
++ +EM +G+ P T T I LC G A+ + + A K + YK ++ R
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVER 377
Query: 480 LSRFGK 485
L GK
Sbjct: 378 LMGAGK 383
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 190 DIHSYNVILRAL---GKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
DI S + ++R + G + K+ ++ +++ + + V ++++ +A+
Sbjct: 118 DIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAM 177
Query: 247 QIFGN-TEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAG 304
+ F E+ G D + N +++ LC++ + S F + K ++ ++NT++
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE 237
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + + +I + M +P+ +++S ++GL R + DAL + D + + +
Sbjct: 238 FYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
YNA+I+ + +L+E +K Y + PD TY LI K + A+E+ +
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE 357
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
E + ++ +E L G A + K +
Sbjct: 358 EAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 160/385 (41%), Gaps = 2/385 (0%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML-RDLRTEGITVNLETLSIVADG 235
FF+WA +QP +++ I + L K + M+ L R + E +L + G
Sbjct: 132 FFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVG 191
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
A R A+Q FGN G D+ +VLL L + + + F+ + +
Sbjct: 192 YAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCA 251
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
T++ ++ + K G++ + + L A++ + S L+ L + ++A K+ D
Sbjct: 252 VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDE 311
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS-NNCDPDIDTYTKLISAFIKAR 414
+ V YN I I G L+ + + + C+ ++ Y ++ +K
Sbjct: 312 IKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKEN 371
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
+ ++L EM+ +G+ P+ T+ + + C G A+ +Y+ + G + +Y
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
L+ L ++ + + G+ + + + N LC G+ + A ++ + +
Sbjct: 432 YLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAER 491
Query: 535 GFCPSRLIYSKLYNKLLASNKVERA 559
P R+ K+ + L KVE A
Sbjct: 492 DLLPKRIAGCKIISALCDVGKVEDA 516
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 155/409 (37%), Gaps = 71/409 (17%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ YN ++ L K+ +D + +L ++ G++ N +T++ +A V +A++++
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
+ E GF S N L+ LC V A ++ +KG I
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQA---YDVLKGAI------------------ 454
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ G TF +L L G+ + A ++ E+D + +
Sbjct: 455 -------------DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGC 501
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+IS VG +++A+ + D +T LI I + A +++ M +
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 430 GIVPSTGTVTSFIEPLCSF------------------------------------GPPHA 453
G P+ + I+ +C G P
Sbjct: 562 GYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A ++Y + G ++++ L+L + K L+ + +++E G + +Y+ +I
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIV 680
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
GLC +L++A+ +EE +G PS Y KL K + A L
Sbjct: 681 GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL 729
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 2/266 (0%)
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
+ ++ G++ G+ + M G D + LL L + IFD +
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 359 KDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+ +V + ++ ++ F G LDEA Y R LL N+ L+ A RK +
Sbjct: 246 RGFVCAVT-HSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG-PPHAAMMIYKRARKAGCKISLSAYKLLL 477
A ++LDE+ G V +I L G + A + K + GC++ + Y ++
Sbjct: 305 ATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
+L + + +I EM G S + + + C G ++ A+ + GF
Sbjct: 365 FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLF 563
P+ + Y+ L + L A+ VE+AY +
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVL 450
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 170/450 (37%), Gaps = 94/450 (20%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGN-LGGEAMVIFFN---W-------------AIKQPM 186
I + AN V+ + DV+ + RG+ LGG+ N W A ++ +
Sbjct: 434 IHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDL 493
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDL-RTEGITVNLETLSIVADGLVRAQRVYKA 245
+PK I +I K D + M+ +L G+ + + + + G + R A
Sbjct: 494 LPKRIAGCKIISALCDVGKVEDAL--MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIA 551
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF---NVATYNTII 302
++ +E G+ ++QC+C+ N + +K ++ V YN I
Sbjct: 552 AKLIIRMQEKGYTPTRSLYRNVIQCVCEMES-GEKNFFTTLLKFQLSLWEHKVQAYNLFI 610
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
G G+ + + + M DG TP ++ +LQ + +I DAL F +L E+
Sbjct: 611 EGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKT 670
Query: 363 LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEM 422
+ +Y MI VG KA K+ DA+
Sbjct: 671 -KKRLYQVMI-----VG------------------------------LCKANKLDDAMHF 694
Query: 423 LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM---- 478
L+EM G+G+ PS I+ LC+ A+ + RK+G +I+ +LL
Sbjct: 695 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 754
Query: 479 ----------------RLSRFGKCGMLLNIW-------------EEMQESGYSSDMEVYE 509
++ G L+ ++ +E+ E Y DM Y
Sbjct: 755 SKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYN 814
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPS 539
++ + + Q E+A ++E +G+ P+
Sbjct: 815 MLLRMIV-MNQAEDAYEMVERIARRGYVPN 843
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 272 CKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
CK+ RA F K + ++T+N +++ + + + +L + E G T DC
Sbjct: 446 CKKQ--RAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
+ +L+ ++G+++ ++F + + A+I G + +A Y L
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG--IVPSTGTVTSFIEPLCSFG 449
S N PD + LISA ++ V A ++L EM + I P ++ + ++ C+ G
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 450 PPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
A +Y+ K G + + Y + + S+ G +I+++M+E + D +
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+I+ + L+ A +++++ +G + YS L + ++A +L+ KIK+
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 570 R 570
+
Sbjct: 744 K 744
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/333 (18%), Positives = 131/333 (39%), Gaps = 36/333 (10%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+++ + D Y ++ + K +D M ++ + G+ NL T + DG RA +
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTI 301
V KA +G + + +V+ FNA +
Sbjct: 553 VAKAFGAYG--------------------ILRSKNVKPDRVVFNA--------------L 578
Query: 302 IAGWSKIGQVCQMKKILEAMVEDG--FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
I+ + G V + +L M + PD + +L++ AG++E A +++ + +
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
VY +++ GD D A Y+ + + PD ++ LI A+ + +A
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
+L + QGI T + +S + C+ A+ +Y++ + + ++S L+
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYII 512
L + + +E++ G + Y ++
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 164/394 (41%), Gaps = 39/394 (9%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGN 251
++YN ++ GK I + + + EGI T + + I I+GN
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTM-------------IHIYGN 345
Query: 252 TEEFG----------FGC--DTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVAT 297
+ G C DT + N+L+ K + + A +YF +K G P + +
Sbjct: 346 NGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKP-DPVS 404
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
Y T++ +S V + + ++ M +D D T +L + A +E + F
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF- 463
Query: 358 EKDYV---LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+V + + Y+A I + G L EA + + C N I+ Y +I A+ ++
Sbjct: 464 ---HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE-YNVMIKAYGISK 519
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
A E+ + M+ G+ P T + ++ L S PH ++ R+ G Y
Sbjct: 520 SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
++ + G+ M +++EM E D+ VY +IN + G ++ A+ +E
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEA 639
Query: 535 GFCPSRLIYS---KLYNKLLASNKVERAYKLFLK 565
G + +IY+ KLY K+ ++ E Y+ L+
Sbjct: 640 GIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 127/300 (42%), Gaps = 9/300 (3%)
Query: 134 FLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHS 193
L+ L+ +E AL+ LS + + + + E V F W + ++
Sbjct: 131 ILEALDSIEDVEDALSPWAERLS-NKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIH 189
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN++LR LGK ++ + ++ +GI T + D + A+ G
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 249
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYF-------NAVKGKIPFNVATYNTIIAGWS 306
+ G D + ++LQ K + A +F N + + TYNT+I +
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
K GQ+ + + + M+E+G P TF++++ G G++ + + + + +T
Sbjct: 310 KSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTR 368
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
YN +IS D++ A Y++ + + PD +Y L+ AF V +A ++ EM
Sbjct: 369 TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 15/286 (5%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN------LETLSIVADG 235
+K + D SY +L A + ++ ++ ++ + + ++ L + + A+
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
L ++ +K + GN G+ + ++ +R ++ A F + V
Sbjct: 453 LEKSWSWFKRFHVAGNMSSEGYSANIDAYG-------ERGYLSEAERVFICCQEVNKRTV 505
Query: 296 ATYNTIIAGWSKIGQVCQMK-KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
YN +I + I + C+ ++ E+M+ G TPD T+++L+Q L A +
Sbjct: 506 IEYNVMIKAYG-ISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ E YV + Y A+IS+F+ +G L+ A + Y+ ++ N +PD+ Y LI+AF
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
V A+ ++ M GI ++ S I+ G A IY++
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRK 670
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 15/296 (5%)
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTI 301
KA ++F + +G D + N L+Q L Y ++ G + + Y +
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS-DCIPYCAV 581
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I+ + K+GQ+ +++ + MVE PD + L+ G ++ A+ + + E
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCD----PDIDTYTKLISAFIKARKVA 417
+ +YN++I + VG LDEA YR LL +C+ PD+ T +I+ + + V
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSF---GPPHAAMMIYKRARKAGCKISLSAYK 474
A + D M +G +F LC + G A I K+ R+ +Y
Sbjct: 701 KAEAIFDSMKQRG----EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYN 756
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+L + G+ + ++EM SG D ++ + L +G + AV +EE
Sbjct: 757 SVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 38/278 (13%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ D +YN +++ L L +R G + V V+ ++ A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK-GKIPFNVATYNTIIAGW 305
+++ E+ D VL+ +V+ A SY A+K IP N YN++I +
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 306 SKIGQVCQMKKILEAMVE--------DGFTPDC---------------STFDSLLQG--- 339
+K+G + + + I +++ D +T +C + FDS+ Q
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA 715
Query: 340 -----------LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
+ GR E+A +I + E + + YN+++ F G EA++ +
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
+ ++S+ PD T+ L + +K A+ ++E+
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 153/355 (43%), Gaps = 5/355 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K+ I D+ +YN ++ GK K +++++ G+ N + S + V +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNT 300
+A+ +F +E D + N+++ + V+ A+ F ++ K I NV +YNT
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
I+ + + + + M + T++++++ G+ E A + + +
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 361 YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
Y+ +IS + G LD A ++ L S+ + D Y +I A+ + + A
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 421 EMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL 480
+L E+ +P +T L G A ++++A ++G +S + ++
Sbjct: 491 RLLHELKLPDNIPRETAITI----LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLY 546
Query: 481 SRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
SR + ++ ++E+M+ +GY D V ++N + E A V E +G
Sbjct: 547 SRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 166/390 (42%), Gaps = 7/390 (1%)
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
++Q + D ++Y+ ++ + GK+ D L L+ + + ++ +L S + + R
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYN 299
KAI IF + G D + N ++ K R A + G +P N +Y+
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP-NTVSYS 299
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+++ + + + + + M E D +T + ++ G+ +++A ++F +L +
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
D YN ++ + EAI +R + + + ++ TY +I + K + A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
++ EM +GI P+ T ++ I G A ++++ R +G +I Y+ +++
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
R G G + E++ D E I L G+ E A V ++ G
Sbjct: 480 YERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 540 RLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
++ + N + + ++F K++ A
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 127/290 (43%), Gaps = 11/290 (3%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+ AL T ++ +DV + ++ EA +F W++++ I ++ SYN ILR G+
Sbjct: 324 VNCALDLTTCNIMIDVYGQL----DMVKEADRLF--WSLRKMDIEPNVVSYNTILRVYGE 377
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ + + R ++ + I N+ T + + + KA + + G + +
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 437
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
+ ++ K + A + F ++ + + Y T+I + ++G + K++L +
Sbjct: 438 YSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK 497
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
PD ++ + L +AGR E+A +F E V + SV+ MI+ +
Sbjct: 498 ----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYV 553
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
I+ + + + PD + +++A+ K R+ A + EM +G V
Sbjct: 554 NVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCV 603
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/317 (17%), Positives = 130/317 (41%), Gaps = 35/317 (11%)
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+ K +V YN ++ + Q + + M + PD T+ +L+ G+ G +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
AL + + + +Y+ +I + D +AI + L + PD+ Y +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
+ + KA+ +A ++ EM G++P+T + ++ + A+ ++ ++ C
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 468 ISLSAYKLLL------------------MR--------------LSRFGKC---GMLLNI 492
+ L+ +++ +R L +G+ G +++
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
+ MQ ++ Y +I + E A +++E +G P+ + YS + +
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 553 SNKVERAYKLFLKIKAA 569
+ K++RA LF K++++
Sbjct: 448 AGKLDRAATLFQKLRSS 464
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
NV YNT++ G+ K G + + + + M ++ PD TF+ L+ G R+ + + AL +F
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ EK +N +I F+S G ++E +K ++ C T L+ +
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCRE 311
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+V DA ++ ++L + ++PS S +E LC AM + + K G A
Sbjct: 312 GRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIAC 371
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L+ L + G+ E+M +G D + ++ LC+ +A + +
Sbjct: 372 TTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASS 431
Query: 534 KGFCPSRLIYSKL 546
KG+ P Y L
Sbjct: 432 KGYEPDETTYHVL 444
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 153/392 (39%), Gaps = 11/392 (2%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLR------TEGITVNLETLSI 231
FNWA D S+ + R+L D + ++L + + GI E I
Sbjct: 100 FNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPI 159
Query: 232 ---VADGLVRAQRVYKAIQIFGNTEEFGFG-CDTESLNVLLQCLCKRSHVRAANSYFNAV 287
D RA+++ A+ F + G + N ++ K + A ++ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 288 -KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
K + +V T+N +I G+ + + + M E G P+ +F++L++G +G+I
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
E+ +K+ ++E + ++ G +D+A LL+ P Y L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ K A+EM++E+ +G P T+ +E L G A ++ AG
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ LLL L + GY D Y +++G G+ + +
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
++ E L K P Y++L + L + K R
Sbjct: 460 LVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 117/268 (43%), Gaps = 36/268 (13%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEK-DYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
F S + RA +++ AL FD + D VYN +++ ++ GD+D+A+++Y+ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
PD+ T+ LI+ + ++ K AL++ EM +G P+ + + I S G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK----CGMLLNI--------------- 492
+ + + GC+ S + ++L+ L R G+ CG++L++
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 493 ----------------WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
EE+ + G + ++ GL G+ E A ME+ ++ G
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFL 564
P + ++ L L +S+ A +L L
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRL 427
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 159/376 (42%), Gaps = 5/376 (1%)
Query: 177 FFNW-AIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADG 235
F+ W ++++P + + +V+ LG+++ D++L +L +L + ++ + G
Sbjct: 224 FYEWMSLQEPSLASP-RACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISG 282
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK--RSHVRAANSYFNAVKGKIPF 293
L +QR A +++ ++ D + +L+ L K RS + + + +
Sbjct: 283 LSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKW 342
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+ + ++ + G + I M + G + +++L+ ++ IE+ +F
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ +K + YN ++ + D R + +P++ +YT LISA+ +
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 414 RKVAD-ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
+K++D A + M G+ PS+ + T+ I G A ++ K G K S+
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y +L R G G L+ IW+ M Y +++G G A V+ E
Sbjct: 523 YTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Query: 533 HKGFCPSRLIYSKLYN 548
G PS + Y+ L N
Sbjct: 583 KMGLQPSVMTYNMLMN 598
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 125/305 (40%), Gaps = 2/305 (0%)
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTII 302
+A+ I E+ G +T N L+ K +H+ F ++ K + + ATYN ++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED-ALKIFDNLVEKDY 361
+++ Q ++ +L M + G P+ ++ L+ GR ++ D A F + +
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
+ Y A+I + G ++A + + P ++TYT ++ AF ++ +E
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+ ML + I + T + ++ G A + K G + S+ Y +L+ +
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRL 541
R G+ L + +EM D Y +I + + A + + G P
Sbjct: 602 RGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPR 661
Query: 542 IYSKL 546
Y KL
Sbjct: 662 SYEKL 666
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 160/404 (39%), Gaps = 23/404 (5%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI-Q 247
+D+ YN + L + D ++ + + + T +I+ L +A R K + +
Sbjct: 271 RDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWE 330
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWS 306
IF E G + L++ C A ++ K I N YNT++ ++
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK--DYVLE 364
K + +++ + M + G P +T++ L+ R + + I + L+ + D LE
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPD----IVETLLREMEDLGLE 446
Query: 365 TSV--YNAMISNFISVGDL-DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
+V Y +IS + + D A + + P +YT LI A+ + A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+EM +GI PS T TS ++ G M I+K + K + Y L L
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL---LD 563
Query: 482 RFGKCGMLL---NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
F K G+ + ++ E + G + Y ++N GQ +++E P
Sbjct: 564 GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKP 623
Query: 539 SRLIYSKLYNKLLASNKVERAY---KLFLK---IKAARSNENAR 576
+ YS + + +RA+ K+ +K + RS E R
Sbjct: 624 DSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLR 667
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 11/264 (4%)
Query: 330 CSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR 389
CS +LL GR + L + NL +K+ + +YNA IS + D+A + Y
Sbjct: 241 CSVLFTLL---GRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYE 297
Query: 390 CLLSNNCDPDIDTYTKLISAFIKA-RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ N PD T LI+ KA R + E+ ++M +G+ S ++ C
Sbjct: 298 AMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 449 GPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
G A++I K G + + Y L+ ++ + ++ EM++ G Y
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKV-ERAYKLFLKIK 567
+++ Q + ++ E G P+ Y+ L + + K+ + A FL++K
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 568 AARSNENARRF------WRANGWH 585
++ + + +GWH
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWH 501
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 166/397 (41%), Gaps = 11/397 (2%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFML-KMLRDLRTEGITVNLETLSIVADG 235
FF W KQ D +++ ++ + K + + +++ L+ G + ++ +
Sbjct: 58 FFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEI 117
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPF 293
R KAI+++ FGF +T ++N+++ K + V A F ++ + F
Sbjct: 118 FWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSF 177
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++A + G G + +K +L+ M+ +GF P+ F +L+ R G + +A ++
Sbjct: 178 DIALSHFCSRGGR--GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
++ + +V++ ++S F G+ +A+ + ++ C P++ TYT LI F+
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
V +A +L ++ +G+ P I G A ++ K +
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+L L GK ++ I + G D+ + N IG A+ V+ +
Sbjct: 356 ASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSY 412
Query: 534 KGF---CPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
K F C + +Y + A + YK+ +K K
Sbjct: 413 KDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEK 449
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 146/352 (41%), Gaps = 6/352 (1%)
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
+L+ + EG N E + R V +A Q+ G G ++L+
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 273 KRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
+ + A FN + G P N+ TY ++I G+ +G V + +L + +G PD
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSP-NLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
+ ++ R GR E+A K+F +L ++ V + + +++S+ G D +
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ D D+ T L + F K + AL++L M + T T ++ LC G
Sbjct: 378 I---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
P AA+ +YK K + + ++ L GK +++++ Y D+ Y
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
I GL ++E A + + G P+R Y + + L + E+ K+
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 136/299 (45%), Gaps = 7/299 (2%)
Query: 151 TGVDLSLDVVAKTLYRGNLGGEAM--VIFFNWAIKQPMIPKDIHSYNVILRALGKKKFID 208
+G+ +S++V + + GE V FN I+ P ++ +Y +++ +D
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSP-NLVTYTSLIKGFVDLGMVD 299
Query: 209 FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLL 268
+L +++EG+ ++ +++ R R +A ++F + E+ D + +L
Sbjct: 300 EAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 269 QCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
LC + + F++ T N + +SKIG K+L M F
Sbjct: 360 SSLCLSGKFDLVPRITHGIG--TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
DC T+ L L R G A+K++ ++++ L+ ++A+I + I +G + A+ +
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 389 -RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
RC+L D+ +YT I ++A+++ +A + +M GI P+ T + I LC
Sbjct: 478 KRCILEKY-PLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 166/384 (43%), Gaps = 9/384 (2%)
Query: 154 DLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKM 213
D++L RG+L G +V+ I + P + ILR + + ++
Sbjct: 178 DIALSHFCSRGGRGDLVGVKIVL--KRMIGEGFYPNR-ERFGQILRLCCRTGCVSEAFQV 234
Query: 214 LRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK 273
+ + GI+V++ S++ G R+ KA+ +F + G + + L++
Sbjct: 235 VGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVD 294
Query: 274 RSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCS 331
V A + + V+ G P ++ N +I ++++G+ + +K+ ++ + PD
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAP-DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQY 353
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
TF S+L L +G+ + +I + + D+ L T N + + F +G A+K +
Sbjct: 354 TFASILSSLCLSGKFDLVPRI-THGIGTDFDLVTG--NLLSNCFSKIGYNSYALKVLSIM 410
Query: 392 LSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
+ D TYT +SA + A++M ++ + ++ I+ L G
Sbjct: 411 SYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKY 470
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
+ A+ ++KR + + +Y + + L R + ++ +M+E G + Y I
Sbjct: 471 NTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTI 530
Query: 512 INGLCNIGQLENAVLVMEESLHKG 535
I+GLC + E ++ E + +G
Sbjct: 531 ISGLCKEKETEKVRKILRECIQEG 554
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 162/395 (41%), Gaps = 7/395 (1%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F + + P P+ ++N ++ GK ++ + ++ G+ ++ T + +
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFN 294
+ +A + EE G DT++ N+LL + AA Y+ ++ G P +
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP-D 409
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
T+ ++ + V +++ ++ M + D + ++Q G + A +F+
Sbjct: 410 TVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEA--IKYYRCLLSNNCDPDIDTYTKLISAFIK 412
+ D VL ++ A+I + G EA + Y + +S + D+ Y +I A+ K
Sbjct: 470 RF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRN-DVLEYNVMIKAYGK 527
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSA 472
A+ AL + M QG P T S + L A I +GCK
Sbjct: 528 AKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKT 587
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
Y ++ R G ++++E M+++G + VY +ING G +E A+
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME 647
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G + ++ + L +E A +++ K+K
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 23/317 (7%)
Query: 228 TLSIVAD-----GL-VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAAN 281
TL+ V D GL V A+ V+ +G G D NV+++ K A
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVF-----YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKAL 535
Query: 282 SYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
S F +K G P + TYN++ + + V + ++IL M++ G P C T+ +++
Sbjct: 536 SLFKGMKNQGTWP-DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
R G + DA+ +++ + + VY ++I+ F G ++EAI+Y+R + + +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
T LI A+ K + +A + D+M P S + G A I+
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN 714
Query: 460 RARKAG-CKISLSAYKLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIINGL 515
R+ G C + A + L + GML + + EEM+ESG SD + ++
Sbjct: 715 ALREKGTCDVISFATMMYL-----YKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 516 CNIGQLENAVLVMEESL 532
GQL + E L
Sbjct: 770 AADGQLSECCELFHEML 786
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/387 (17%), Positives = 151/387 (39%), Gaps = 36/387 (9%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+P D ++N ++ G + +L+ + +GI+ + +T +I+ A + A+
Sbjct: 336 VPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAAL 395
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGW 305
+ + + G DT + +L LC+R V + + + I + + I+ +
Sbjct: 396 EYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 306 SKIGQVCQMKKILEAMVED-----------------------------------GFTPDC 330
G V Q K + E D G D
Sbjct: 456 VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDV 515
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
++ +++ G+A E AL +F + + + YN++ V +DEA +
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+L + C P TY +I+++++ ++DA+++ + M G+ P+ S I G
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A+ ++ + G + + L+ S+ G ++++M++S D+
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFC 537
+++ ++G + A + KG C
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGTC 722
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 178/440 (40%), Gaps = 38/440 (8%)
Query: 155 LSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML 214
L +V+ K + L +A+ +F +K D +YN + + L +D ++L
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLF--KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 215 RDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR 274
++ G +T + + VR + A+ ++ E+ G + L+ +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 275 SHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTF 333
V A YF ++ + N ++I +SK+G + + +++ + M + PD +
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 334 DSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
+S+L G + +A IF+ L EK + + M+ + +G LDEAI+ +
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEML-------------------GQGIVPS 434
+ D ++ ++++ + ++++ E+ EML +G VPS
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 435 TG-----TVTSFIEPLCS---FGPPHAAMMIYKRARKAGCKISLS-------AYKLLLMR 479
T + +PL + +AM +Y A ++ +++ AY ++
Sbjct: 813 EAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYT 872
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
S G M L + MQE G D+ Y++ G +E V PS
Sbjct: 873 YSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPS 932
Query: 540 RLIYSKLYNKLLASNKVERA 559
+ ++ + + +++N+ + A
Sbjct: 933 QSLFKAVRDAYVSANRQDLA 952
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FFNW + + P + YNV +++L + + +M ++ +G+ ++ T S +
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN----------- 285
R KAI+ F + G D + + +L K V S +
Sbjct: 232 KRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDA 291
Query: 286 ---AVKGK----------------------IPFNVATYNTIIAGWSKIGQVCQMKKILEA 320
+V GK + NV YNT++ + G+ + +
Sbjct: 292 IAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 321 MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGD 380
M+E G TP+ T +L++ G+A DAL++++ + K + ++ +YN +++ +G
Sbjct: 352 MLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGL 411
Query: 381 LDEAIKYYRCLL-SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+EA + + + S C PD +YT +++ + K A+E+ +EML G+
Sbjct: 412 EEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 287 VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
VK + + TY+TII + + + E M + G PD T+ ++L ++G++
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY-YRCLLSNNCDPDIDTYTK 405
E+ L +++ V + + ++ + F GD D I+Y + + S + P++ Y
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD-GIRYVLQEMKSMDVKPNVVVYNT 331
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
L+ A +A K A + +EML G+ P+ T+T+ ++ IY +AR A
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVK-------------IYGKARWAR 378
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
L +WEEM+ + D +Y ++N +IG E A
Sbjct: 379 DA----------------------LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE 416
Query: 526 LVMEESLHKGFC-PSRLIYSKLYNKLLASNKVERAYKLF 563
+ + C P Y+ + N + K E+A +LF
Sbjct: 417 RLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELF 455
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 114/294 (38%), Gaps = 37/294 (12%)
Query: 278 RAANSYFNAVKGK--IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDS 335
+ +++FN VK K P YN + Q ++++ MV+DG D T+ +
Sbjct: 167 QKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYST 226
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
++ R A++ F+ + + + + Y+A++ + G ++E + Y ++
Sbjct: 227 IITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATG 286
Query: 396 CDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
PD A A +L +M G+ G
Sbjct: 287 WKPD-----------------AIAFSVLGKMFGEA------------------GDYDGIR 311
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
+ + + K ++ Y LL + R GK G+ +++ EM E+G + + + ++
Sbjct: 312 YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY 371
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
+A+ + EE K + ++Y+ L N E A +LF +K +
Sbjct: 372 GKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKES 425
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 8/273 (2%)
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQ 313
EF +G +SL C +R+H A Y KG P +YN II G K G +
Sbjct: 307 EFAYGHMIDSL-----CRYRRNHGAARIVYIMKSKGLKP-RRTSYNAIIHGLCKDGGCMR 360
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
++LE E F P T+ L++ L + A + + ++ K+ T +YN +
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML-GQGIV 432
+ + E + +L +C PD T +I+ K +V DA+++LD+M+ G+
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA 480
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG-CKISLSAYKLLLMRLSRFGKCGMLLN 491
P T+ + + L + G A+ + R K + AY ++ L + K ++
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 492 IWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
++ +++++ ++D Y II+GLC +++ A
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMA 573
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 139/340 (40%), Gaps = 6/340 (1%)
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
++++G+ + + + GL + +A Q+ EF F + +L++ LCK
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 277 V-RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDS 335
+A N ++ + YN + G + ++ +L +M++ PD T ++
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETSV-YNAMISNFISVGDLDEAIKYY-RCLLS 393
++ GL + GR++DA+K+ D+++ + +V N ++ ++ G +EA+ R +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
N P + Y +I K K +A+ + ++ + + T I+ LC
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
A + + Y L L + G + ++ +SG ++ Y +I
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIA 632
Query: 514 GLCNIGQLENAVLVMEESLHKGFCPSRL---IYSKLYNKL 550
G A ++EE G P + I KL++ +
Sbjct: 633 ECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSM 672
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 194 YNVILRAL----GKKKFIDFMLKMLR-DLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
YN+ LR L + ++ ++ ML+ D R + T+N V +GL + RV A+++
Sbjct: 415 YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN-----TVINGLCKMGRVDDAMKV 469
Query: 249 FGNTEEFGF-GCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGW 305
+ F D +LN ++ L + A N V + KI V YN +I G
Sbjct: 470 LDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGL 529
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
K+ + + + + + T D +T+ ++ GL +++ A K +D+++ +
Sbjct: 530 FKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDA 589
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
VY A + G L +A + L + P++ Y +I+ ++ +A ++L+E
Sbjct: 590 FVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEE 649
Query: 426 MLGQGIVPSTGT 437
M G P T
Sbjct: 650 MRKNGQAPDAVT 661
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 11/332 (3%)
Query: 208 DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVL 267
D L++L L G + LS V L A R +A + F GF D + NV+
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 268 L-QCLCKRSHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
+ + L RS V + K F ++ YN ++ I +V K++ M
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
G PD TF +L+ G +E A K+FD + + + +I F+ + D++
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 385 IKYYRCL---LSNNCDPDID--TYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
K + L + N D + + L+ + + D E+ + M V
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
I+ LC + H A I + G K ++Y ++ L + G C + EE E
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 500 GYSSDMEVYEYIINGLC---NIGQLENAVLVM 528
+ Y+ ++ LC + G+ N + +M
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELM 403
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 111/271 (40%), Gaps = 13/271 (4%)
Query: 306 SKIGQVCQMKKILEA------MVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV-- 357
S I +C + EA + GF PD T + ++ L + L + L+
Sbjct: 95 SVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGF 154
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+K++V + YN +++ ++ + +A K + + PD+ T+T LI + + R++
Sbjct: 155 KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELE 214
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR-----ARKAGCKISLSA 472
A ++ DEM GI P++ T++ I + K + + +A
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA 274
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
+ L+ + R G + I E M + Y ++I+ LC + A ++
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 533 HKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
KG P R Y+ + + L RAY+L
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL 365
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ + ++L MV +G PD T D ++ L GR+++A + L EK +T YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 371 MISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
++ + DL ++ + + + PD+ ++T LI ++ + +A+ ++ ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
G P + ++ C+ A+ +YK+ ++ G + Y L+ LS+ G+
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 490 LNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ M ++GY D Y ++NG+C G
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 117/282 (41%), Gaps = 12/282 (4%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL--RTEGITVNLETLSIVAD 234
FN IP D+ +N +L++ G ++ +K+ + + T I+
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 235 GLVRA-----QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG 289
RA V++ + + N G D + ++ ++ LC+ V A +
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNN---GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 290 K-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED-GFTPDCSTFDSLLQGLGRAGRIE 347
K P + TYN ++ K + + + ++ M +D PD +F L+ + + +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
+A+ + L + + +YN ++ F ++ EA+ Y+ + +PD TY LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 408 SAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
KA +V +A L M+ G P T T TS + +C G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 342 RAGRIEDALKIFDNLVEKDYV-LETSVYNAMISNFISVGDLDEAIKYYRCLLSN--NCDP 398
++ + DA +F+++ + L+ +N+++ ++ S+ +++ +K ++ +L + N P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 399 DIDTYTKLISAFIKA--RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
T+ L+S +A +++ +L+ M+ G+ P T + LC G A
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES-GYSSDMEVYEYIINGL 515
+ K + Y LL L + ++ +EM++ D+ + +I+ +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
CN L A+ ++ + + GF P +Y+ + +K A ++ K+K
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 157/389 (40%), Gaps = 14/389 (3%)
Query: 170 GGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML-RDLRTEGITVNLET 228
G MV+ F W I++ + D H+Y ++++AL + + + K+L R L +E +
Sbjct: 196 GRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFY 255
Query: 229 LSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNV----LLQCLCKRSHVRAANSY- 283
L+ + +GL Q A + + D L + +++ LC + A S
Sbjct: 256 LNFI-EGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 284 FNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRA 343
+ K I +V Y+ II G K + + + M++ +C S+LQ +
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 344 GRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTY 403
G +A +F E + L+ YN +G ++EAI+ +R + PD+ Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 404 TKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
T LI K +DA +++ EM G G P L + G A K
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 464 AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
G K + + +++ L G+ +E ++ +D ++ G C G L++
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDH 550
Query: 524 AVLVMEESLHKGFCPSRLIYSKLYNKLLA 552
A E + F + +Y L+ L A
Sbjct: 551 A---FERFIRLEFPLPKSVYFTLFTSLCA 576
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 16/288 (5%)
Query: 267 LLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG 325
L+ C+ ++VR A +F V KI ++ TY +I + ++ + Q + E M
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
PD T+ LL + L + + D + + Y MI+ + + DL +
Sbjct: 666 VKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVY 718
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
++ + PD+ TYT L+ K + EM + P T I+
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
C G A I+ + ++G + Y L+ + G I++ M ESG D+
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL-YNKLLA 552
Y +I G C G + AV +++E L KG P++ S + Y KL A
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKA 879
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 120/282 (42%), Gaps = 50/282 (17%)
Query: 159 VVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLR 218
++ T R N +A +F + +K+ + D+ +Y+V+L + D L M R++
Sbjct: 640 IMINTYCRLNEPKQAYALFED--MKRRDVKPDVVTYSVLLNS-------DPELDMKREME 690
Query: 219 TEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVR 278
+ ++ +I+ + + K +F + + D + VLL+ +R+ R
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 279 AANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ 338
++ + +V Y +I KIG + + K+I + M+E G PD + + +L+
Sbjct: 751 EMKAF------DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 339 GLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDP 398
+ G +++A IFD ++E + P
Sbjct: 805 CCCKMGYLKEAKMIFDRMIE-----------------------------------SGVKP 829
Query: 399 DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
D+ YT LI+ + V A++++ EML +GI P+ ++++
Sbjct: 830 DVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 16/259 (6%)
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
L T+ I +L T +I+ + R +A +F + + D + +VLL +
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDM 685
Query: 277 VRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
R ++ IP +V Y +I + + + ++ + + M PD T+ L
Sbjct: 686 KREMEAF-----DVIP-DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 337 LQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC 396
L+ + +K FD V+ D Y +I +GDL EA + + ++ +
Sbjct: 740 LKNKPERN-LSREMKAFD--VKPD----VFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV 792
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
DPD YT LI+ K + +A + D M+ G+ P T+ I C G A+
Sbjct: 793 DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVK 852
Query: 457 IYKRARKAG---CKISLSA 472
+ K + G K SLSA
Sbjct: 853 LVKEMLEKGIKPTKASLSA 871
>AT5G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5213290-5215296 FORWARD
Length = 668
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 16/316 (5%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+E + + V+ D+V + R ++ ++FF W + + D +YN + R LGK
Sbjct: 240 VEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGK 299
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+KF+D ++ ++R+ G V +ET V+ + + + +A+ +F E + S
Sbjct: 300 EKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLF----EIAMAGSSSS 355
Query: 264 LNVLLQCLC------KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSK----IGQVCQ 313
N C C + + + + AVK A ++++ K + +V Q
Sbjct: 356 NNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQ 415
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
++L+ M G+ P + L R G+ ++A + D + L+ +++
Sbjct: 416 SNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVE 475
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDID-TYTKLISAFIKARKVADALEMLDEMLGQG-I 431
+ G+LDEA+ + ++ N D ++ KL+ A+ +V DA ++L + + +
Sbjct: 476 GYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQL 535
Query: 432 VPSTGTVTSFIEPLCS 447
P T S + L +
Sbjct: 536 KPRHSTYKSLVTNLLT 551
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 108/235 (45%), Gaps = 12/235 (5%)
Query: 197 ILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFG 256
+L++L ++ ++L++++ G + + S++A L R + +A + E G
Sbjct: 403 VLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSG 462
Query: 257 FGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYN--TIIAGWSKIGQVCQM 314
D +++ L++ C ++ A F + G + A Y+ ++ + QV
Sbjct: 463 NNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDA 522
Query: 315 KKILEAMV-EDGFTPDCSTFDSLLQGL-----GRAGRIEDALKIFDNLVEKDYVLETSVY 368
K+L A V ++ P ST+ SL+ L R G E+AL + + KD+ +
Sbjct: 523 YKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLP--IMKDHGFPPFI- 579
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+ +S F S G EA+ + + + SNN P I ++ +K+ + ++A ++L
Sbjct: 580 DPFMSYFSSTGKSTEALGFLKAMTSNNF-PYISVVLRVFETMMKSARHSEAQDLL 633
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 162/382 (42%), Gaps = 19/382 (4%)
Query: 90 NLLPFSANAAPTAHPYRNNQSNKL----EESKVVADLFLLPEEKLRGVFLQKLNGKSAIE 145
NL +SA + R + KL + V+ D FL P+ + I
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 146 SALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIK--QPMIPKDIHSYNVILRALGK 203
S + G+ L V L GE ++A K + M +D+ ++N +L A +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGE-----LDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+ +++++++ EGI+ L T +I+ G + + A+ + E FG D +
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 264 LNVLLQCLCKRSHVRAANSYFNA--VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAM 321
++ L A F + G +P N T + ++ S + + Q ++
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVP-NAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
V+ GF D +SL+ + G++EDA K+FD++ KD +N+MI+ + G
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYC 434
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP-STGTVTS 440
+A + + + N P+I T+ +IS +IK +A+++ M G V +T T
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 441 FIEPLCSFGPPHAAMMIYKRAR 462
I G A+ ++++ +
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQ 516
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 13/338 (3%)
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG 289
S + G + R+ A FG E +T+ L++ +C C + A F++++
Sbjct: 90 SCIDSGSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGC----IADARKVFDSMRE 143
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
+ N+ T++ +I +S+ + ++ K+ M++DG PD F +LQG G +E
Sbjct: 144 R---NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
I +++ V N++++ + G+LD A K++R + + D+ + ++ A
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLA 256
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
+ + K +A+E++ EM +GI P T I G AAM + ++ G
Sbjct: 257 YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITAD 316
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
+ + ++ L G L+++ +M +G + ++ + + V
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++ GF L+ + L + K+E A K+F +K
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 22/333 (6%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
++ T + + G +A KA ++F ++ + + N ++ K A F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 285 NAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
++ GK+ N AT+N IIAG+ + G+ + ++ M F P+ T SLL
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
+ +I ++ ++ +V NA+ + GD I+Y R + DI T
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD----IEYSRTIFLGMETKDIIT 592
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRAR 462
+ LI ++ AL + ++M QGI P+ GT++S I H M +
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII-------LAHGLMGNVDEGK 645
Query: 463 KAGCKIS-----LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCN 517
K I+ + A + + +G+ L + +QE S+ ++E + G C
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG-CR 704
Query: 518 I-GQLENAVLVMEE--SLHKGFCPSRLIYSKLY 547
I G ++ A+ E SL + I S++Y
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQIY 737
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 181/463 (39%), Gaps = 41/463 (8%)
Query: 144 IESALANTGV--DLSLDVVAKTLYRGNLGGEAMVI-FFNWAIKQPMIPKDIHSYNVILRA 200
IE +L G +S +VA+ + L ++ + FFNWA +QP D SY+ I ++
Sbjct: 32 IEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKS 91
Query: 201 LGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCD 260
L + M + + +++ I ++ + D LV ++ A + G
Sbjct: 92 LSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIH 151
Query: 261 TESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILE 319
+ N LL L A F ++ K + N + I + + + Q+ ++++
Sbjct: 152 PDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVD 211
Query: 320 AMVEDGFTPDCSTFDSL-LQGLGRAGRIEDALKIFD------------------------ 354
+ + + S L L L + R DA I +
Sbjct: 212 EVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVT 271
Query: 355 -NLVEKDYVLE----------TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTY 403
NL E+ VL+ +S Y A I + IS L EA + ++S D D
Sbjct: 272 GNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDIL 331
Query: 404 TKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
LI + + A A+E L M+ G +P+ T++ + LC + Y+
Sbjct: 332 DALIGS-VSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS 390
Query: 464 AGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
G L +Y L++ L + G+ +EM++ G + D+ +Y +I C +
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 524 AVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
A + +E +G + Y+ L KL + E + +LF K+
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 172/418 (41%), Gaps = 16/418 (3%)
Query: 169 LGGEAMVIFFNWAIKQPM-IPKDIHS--YNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
LG +A F W +++ ++IH N +L L D+ K+ +R +G+++N
Sbjct: 129 LGRKAQSAF--WVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLN 186
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVL-LQCLCKRSHVRAANSYF 284
+ R+ + +++ ++ + + +L L LCK S R ++++
Sbjct: 187 TLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCS--REMDAFY 244
Query: 285 -----NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQG 339
+ K F Y I + G + + + +L+ + G P S + + +
Sbjct: 245 ILEELRNIDCKPDF--MAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILD 302
Query: 340 LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
L A R+ +A ++ + +V + ++ + +A+I + +S D D A+++ ++S P
Sbjct: 303 LISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGS-VSAVDPDSAVEFLVYMVSTGKLPA 361
Query: 400 IDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
I T +KL + K ++ + + +G + + I LC G + +
Sbjct: 362 IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+K G +S Y L+ + +W+EM G ++ Y +I L G
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARR 577
+ E ++ + ++ L +G P IY L L K+E A ++F K RR
Sbjct: 482 EAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
+Y+ +I+ K G+V + L+ M ++G PD S +++L++ +A I A K++D +
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ + + YN +I G+ +E+++ + +L +PD Y LI K K+
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 417 ADALEMLDEMLGQGIVPSTGTVTS-FIEPLCSFG 449
A+E+ + + + T V S F+ LCS G
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNG 552
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 171/422 (40%), Gaps = 26/422 (6%)
Query: 151 TGVDLSLDVVAKTL--YRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFID 208
+ +DLS ++ L ++ + + FF+W+ + I SY + + L K +
Sbjct: 71 SSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKAR--- 127
Query: 209 FMLKMLRDLRT--EGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNV 266
+L D R E +N S + D L+ + + + ++
Sbjct: 128 ----LLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLV--------------FDL 169
Query: 267 LLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG 325
L+QC K ++ F + +V T NT+I SK + +I E ++
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
P+ T ++Q L + GR+++ + + D + K + V +++ + ++E++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+ LL N D Y+ ++ A K + A ++ DEML +G ++ T F+
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
C G A + ++G + L+ +RFG L E M G
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLK 565
+ ++ + I + A ++ +S+ KGF P YS L + N +++A KLF +
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 566 IK 567
++
Sbjct: 470 ME 471
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 128/312 (41%), Gaps = 39/312 (12%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+P I + +++ R L + + I+ + +L+ L + + V+ SIV + + A
Sbjct: 266 LPSVIVNTSLVFRVLEEMR-IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSAR 324
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAG 304
++F + GF ++ V ++ C++ V+ A + ++ G P++ T+N +I G
Sbjct: 325 KVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD-ETFNCLIGG 383
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+++ G + + E MV G P CS F+ +++ + + + A +I ++K +V
Sbjct: 384 FARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV-- 441
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
PD TY+ LI FI+ + AL++
Sbjct: 442 ---------------------------------PDEHTYSHLIRGFIEGNDIDQALKLFY 468
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM + + P S I LC+ G A K +K + + Y L+ + G
Sbjct: 469 EMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIG 528
Query: 485 KCGMLLNIWEEM 496
++ EM
Sbjct: 529 DKTNADRVYNEM 540
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 14/309 (4%)
Query: 124 LLPEEKLRGV--FLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWA 181
L E +L+ V L ++ GK + S + NT + V + L + E+M +
Sbjct: 244 LCKEGRLKEVVDLLDRICGKRCLPSVIVNTSL------VFRVLEEMRIE-ESMSLLKRLL 296
Query: 182 IKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQR 241
+K ++ D Y++++ A K+ + K+ ++ G + N ++
Sbjct: 297 MKNMVV--DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYN 299
V +A ++ EE G E+ N L+ + Y + +G +P + + +N
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP-SCSAFN 413
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
++ SKI V + +IL ++ GF PD T+ L++G I+ ALK+F + +
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR 473
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
V+ ++I + G ++ KY + + +P+ D Y LI AF K +A
Sbjct: 474 KMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNA 533
Query: 420 LEMLDEMLG 428
+ +EM+
Sbjct: 534 DRVYNEMIS 542
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 125/314 (39%), Gaps = 14/314 (4%)
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAM- 321
++ +++Q LCK ++ + + GK ++I S + +V + +I E+M
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGK-----RCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 322 -----VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFI 376
+ D + ++ + G + A K+FD ++++ + + VY +
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 377 SVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
GD+ EA + + + P +T+ LI F + LE + M+ +G++PS
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCS 410
Query: 437 TVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
++ + + A I ++ G Y L+ L ++ EM
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL---YNKLLAS 553
+ S EV+ +I GLC G++E ++ + P+ IY L + K+
Sbjct: 471 EYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDK 530
Query: 554 NKVERAYKLFLKIK 567
+R Y + ++
Sbjct: 531 TNADRVYNEMISVR 544
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 20/276 (7%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
++ +N++ G+S+ ++ + ++EDG PD TF SLL+ A +E+ ++
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL- 151
Query: 354 DNLVEKDYVLETSVY--NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+ + L+ +VY +I+ + D+D A RC+ +P + Y +I+ +
Sbjct: 152 -HCLSMKLGLDDNVYVCPTLINMYTECEDVDSA----RCVFDRIVEPCVVCYNAMITGYA 206
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG-CKISL 470
+ + +AL + EM G+ + P+ T+ S + G I+K A+K CK
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 471 SAYKLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLV 527
L+ M F KCG L ++I+E+M+ D + + +I N G+ E ++L+
Sbjct: 267 VNTALIDM----FAKCGSLDDAVSIFEKMR----YKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 528 MEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
E + P + + L N + +VE K F
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
N ++ +R+ A S F ++GK + N T ++++ + +G + K I + +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDE 383
F +L+ + G ++DA+ IF+ + KD T ++AMI + + G ++
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD----TQAWSAMIVAYANHGKAEK 314
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ-GIVPSTGTVTSFI 442
++ + + S N PD T+ L++A +V + + +M+ + GIVPS S +
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 443 EPLCSFG 449
+ L G
Sbjct: 375 DLLSRAG 381
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
+++ YNV ++ K K ++ K+ ++ GI + T + + + +A++
Sbjct: 173 REVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK------------------ 290
F FG D ++ ++ + +V A S ++ + +
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 291 ------------------IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
+ N+ YN +I + + Q K I + ++ +GFTP+ ST
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ +L++ GRA +DAL I+ + EK L +YN ++S +DEA + ++ +
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 393 S-NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
+ CDPD T++ LI+ + + +V++A L +M G P+ +TS I+
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 136/313 (43%), Gaps = 17/313 (5%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
NV ++ K + + F+ + +G P N AT+ TII+ + G + + E M
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEMLERGIKPDN-ATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
G PD T +++ GRAG ++ AL ++D + + ++ ++ +I + G+ D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
+ Y + + P++ Y +LI + +A++ A + +++ G P+ T + +
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 443 EPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQ----- 497
A+ IY+ ++ G +++ Y LL + I+++M+
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 498 -ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL---YNKLLAS 553
++ + Y +G + + E A+L M E+ GF P+ + + + Y K
Sbjct: 418 DPDSWTFSSLITVYACSG--RVSEAEAALLQMREA---GFEPTLFVLTSVIQCYGKAKQV 472
Query: 554 NKVERAYKLFLKI 566
+ V R + L++
Sbjct: 473 DDVVRTFDQVLEL 485
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 347 EDALKIFDNLVEK-DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
E A + +NL+E E +YN + F DL+++ K + +L PD T+T
Sbjct: 156 ETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTT 215
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
+IS + A+E ++M G P T+ + I+ G A+ +Y RAR
Sbjct: 216 IISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
+I + L+ G LNI+EEM+ G ++ +Y +I+ + + A
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 526 LVMEESLHKGFCPSRLIYSKL 546
++ ++ + GF P+ Y+ L
Sbjct: 336 IIYKDLITNGFTPNWSTYAAL 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 1/276 (0%)
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
V YN + + K + + +K+ + M+E G PD +TF +++ + G + A++ F+
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ + AMI + G++D A+ Y + D T++ LI + +
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
L + +EM G+ P+ I+ + P A +IYK G + S Y
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
L+ R L I+ EM+E G S + +Y +++ + ++ A + ++ +
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNC 414
Query: 535 GFC-PSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
C P +S L S +V A L+++ A
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREA 450
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
YN ++ ++G+ K + +DL T G T N T + + RA+ A+ I+ +
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG--KIPFNVATYNTIIAGWSKIGQV 311
E G N LL +V A F +K + T++++I ++ G+V
Sbjct: 378 EKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRV 437
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVE 358
+ + L M E GF P S++Q G+A +++D ++ FD ++E
Sbjct: 438 SEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 4/261 (1%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
++ +YN++LRA + +D + + +DL ++ ++ T + V D + + + +
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKI 308
D + NVL+ K+ F ++ + K + T+N++I + K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
+ + + + + M + + P T++ ++ G G + A +IF+ + E D VL+ S
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTL 386
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
NAM+ + G EA K + + PD TY L A+ KA ++ +M
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 429 QGIVPSTGTVTSFIEPLCSFG 449
GIVP+ F+E L FG
Sbjct: 447 DGIVPNK---RFFLEALEVFG 464
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 122/305 (40%), Gaps = 6/305 (1%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
F W KQ D Y+ ++ +GKK + + +++ G + + + +
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 238 RAQRVYKAIQIFGNTEEFGFGCD-----TESLNVLLQCLCKRSHVRAANSYFNAVK-GKI 291
+ KA++ + G + + N+LL+ + V N+ F + +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
+V T+N ++ + K G + +M+ +L M + PD TF+ L+ G+ E +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
F +L+ +N+MI N+ +D+A ++ + N P TY +I +
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
V+ A E+ +E+ V T+ + +E C G A ++ A S
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 472 AYKLL 476
YK L
Sbjct: 420 TYKFL 424
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 97/246 (39%), Gaps = 5/246 (2%)
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
+ PD + L+ +G+ G+ A+ +F + + SVYNA+I+ + D +A+
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 386 KYYRCLLSN-----NCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTS 440
+ R L C P++ TY L+ AF ++ KV + ++ + P T
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 441 FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG 500
++ G + R R CK + + +L+ + + + ++ + S
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ + +I ++ A V ++ + PS + Y + V RA
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 561 KLFLKI 566
++F ++
Sbjct: 369 EIFEEV 374
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 8/274 (2%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
F++A +QP S+ +++ LG+ ++ + + +L R+ G + E + +
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC-KRSHVRAANSYFNA--VKGKIPF 293
A+ K + F EF F + LN +L L R +++ A F + + G +P
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMP- 188
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N +YN ++ + + ++ M+E PD ++ L+QG R G++ A+++
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D+++ K +V + + +I G DE KY ++S P L+ F
Sbjct: 249 DDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
KV +A ++++ ++ G + T I +C+
Sbjct: 305 GKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 321 MVEDGFTPDCSTFDSLLQGL-GRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M+E FTP + +L L G ++ A ++F + + T YN ++ F
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 380 DLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVT 439
DL A + + +L + PD+D+Y LI F + +V A+E+LD+ML +G VP
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----R 260
Query: 440 SFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES 499
+ I LC G + G S L+ FGK ++ E + ++
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 500 GYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC-PSRLIYSKLYNK 549
G + + +E +I +CN + E L +E+++ + +R++ + NK
Sbjct: 321 GETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIENK 371
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 23/268 (8%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
P+ H ++ + + ++ ++ + R G+ N + +++ + A Q
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGW 305
+FG E D +S +L+Q C++ V A + + KG +P T+I G
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVP-----DRTLIGGL 266
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
G + KK LE M+ GF+P S + L++G G++E+A + + +++ L +
Sbjct: 267 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 326
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+ M+ I D E IK + L + +I T+++ I+ +K+ + + D+
Sbjct: 327 DTWE-MVIPLICNEDESEKIKLF---LEDAVKEEITGDTRIVDVGIENKKMPEIEQ--DD 380
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
+ + ST FG P A
Sbjct: 381 AAAETVDSST----------VKFGTPEA 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 401 DTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF-GPPHAAMMIYK 459
+ +T LI + +A+ L +ML P + ++ L S G A ++K
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+R G + +Y LL+ + ++ +M E D++ Y+ +I G C G
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
Q+ A+ ++++ L+KGF P R + L ++
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRTLIGGLCDQ 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKD----YVLETSVYNAMISNFISVGDLDEAIKYYRCL 391
L+ LGR GR + D+++ K Y L ++ +I + ++ + + +
Sbjct: 90 LILKLGR-GRY---FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM 145
Query: 392 LSNNCDPDIDTYTKLISAFIKARK-VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
L N P +++ + R + A E+ G++P+T + ++ C
Sbjct: 146 LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDD 205
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
A ++ + + + +YK+L+ R G+ + + ++M G+ D
Sbjct: 206 LSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RT 261
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
+I GLC+ G + +EE + KGF P + + L + KVE A
Sbjct: 262 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 9/259 (3%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVR-----AQRVYKAIQI 248
Y +++ G+ K D + +++R ++ E E L+R A R+ +AI+I
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFY---NLMRIYGNLAGRINRAIEI 154
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF-NAVKGKIPFNVATYNTIIAGWSK 307
+FG ++S N +L L + F +A K + + N +I G +
Sbjct: 155 LFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCE 214
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV 367
G + ++L+ + P+ TF L++G G+ E+A K+ + + ++ +T
Sbjct: 215 SGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTIT 274
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
+N +IS G ++E I + C+P+ TY +++ + ++ +A EM+ +M+
Sbjct: 275 FNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMI 334
Query: 428 GQGIVPSTGTVTSFIEPLC 446
G+ PS + + LC
Sbjct: 335 SWGMRPSFLSYKKMVLGLC 353
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 227 ETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
++ + + + LV A+ + +IF + + G D LN+L++ LC+ ++ AA +
Sbjct: 168 KSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDE 227
Query: 287 V-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR 345
+ K NV T++ +I G+ G+ + K+LE M ++ PD TF+ L+ GL + GR
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
+E+ + + + + K Y ++ + EA + ++S P +Y K
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPST 435
++ + + V + +L +M+ G VP T
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%)
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G++ + +IL M + G P +F+ +L L A ++ KIF + + ++
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N +I G+L+ A++ P++ T++ LI F K +A ++L+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ I P T T I L G + + +R + GC+ + Y+ +L L +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 489 LLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYN 548
+ +M G Y+ ++ GLC + V+ + ++ GF P L++ K+
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 549 KLLASN 554
+++ N
Sbjct: 386 CVVSKN 391
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 18/243 (7%)
Query: 348 DALKIFDNLVE--------------KDYVLETSVYNAMISNFISVGDLDEAIKYYRCL-L 392
+ LKIFDN+ + KDY S+Y MI+ F DE + R + L
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 393 SNNCDPDIDTYTKLISAFIK-ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPP 451
C + + L+ + A ++ A+E+L M G PS+ + + L S
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLF 183
Query: 452 HAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYI 511
I+ A K G +I +L+ L G L + +E + ++ + +
Sbjct: 184 DEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPL 243
Query: 512 INGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAA 569
I G CN G+ E A ++E + P + ++ L + L +VE L +K+K
Sbjct: 244 IRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGC 303
Query: 570 RSN 572
N
Sbjct: 304 EPN 306
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 178/436 (40%), Gaps = 54/436 (12%)
Query: 115 ESKVVA---DLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGG 171
+S++VA +++ +EKL V + + ++E L VDL LD V + + G
Sbjct: 613 DSEIVAIENEVYQFDDEKLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISG 672
Query: 172 EAMVIFFNWAIKQPMIPKDIHSYNVILRALGKK-KFIDF-----MLKMLRDLRTEGITVN 225
+ ++ F WA + I +L A+ + +D ++K + + + G+ +N
Sbjct: 673 KNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGV-LN 731
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
LE L+ + + + A +F TEEFGF + ++ + L+ LCKRS + A S
Sbjct: 732 LEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCE 791
Query: 286 A-VKGKIPFNVATYNTIIAGWSKIGQ------VCQMKKILEAMVEDGFTPDCST------ 332
+K + II + K G+ V ++ K E + F T
Sbjct: 792 KMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKND 851
Query: 333 ------------------------FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
F ++ L R ++DA + +++ K +V+
Sbjct: 852 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 911
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
N ++ GDLDEA + + + S PD+ TYT +IS + K + +A E+L E
Sbjct: 912 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 971
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL----MRLSRFG 484
+ S T + I C A+ + + G + + Y L+ ++ +
Sbjct: 972 KHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWE 1031
Query: 485 KCGMLLNIWEEMQESG 500
K +L +EEM++ G
Sbjct: 1032 KAEVL---FEEMKQKG 1044
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 112 KLEESKVVADLFLLPEEKLRGVFLQKLNGKS---AIESALANTGVDLSLDVVAKTLYRGN 168
KL +SK D+F EE F N K+ +E+ + +D + V K L G
Sbjct: 744 KLGKSKAAFDVFSKTEE-----FGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGV 798
Query: 169 LG-GEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFID--FMLKMLRDL-RTEG-IT 223
L GE M W K+ K +Y+V A K+K + F+ ++ L + +G IT
Sbjct: 799 LSEGEQMGNIITWFCKEG---KAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 855
Query: 224 VNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSY 283
E L G + + + I+ F + ++ LC+ +V+ A +
Sbjct: 856 FAQEML-----GDLSGEARRRGIKPFSD---------------VIHSLCRMRNVKDAKAL 895
Query: 284 FNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLG 341
+ KG P N A +N ++ SK G + + K++L+ M G PD T+ ++ G
Sbjct: 896 LLDMISKGPAPGN-AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 954
Query: 342 RAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDID 401
+ G +++A +I +K L Y+A+I + + + DEA+K + P+ D
Sbjct: 955 KGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 1014
Query: 402 TYTKLISAF-IKARKVADALEMLDEMLGQGI 431
Y KLI +F +KA A + +EM +G+
Sbjct: 1015 EYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 1045
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 148/315 (46%), Gaps = 27/315 (8%)
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYN 299
R+ +A Q+F E DT S N++L C + + A S+F+ ++PF + A++N
Sbjct: 22 RMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFD----RMPFKDAASWN 73
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
T+I G+++ G++ + +++ +M+E ++++++ G G +E A F +
Sbjct: 74 TMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGYIECGDLEKASHFFKVAPVR 129
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
V + AMI+ ++ ++ A ++ + N ++ T+ +IS +++ + D
Sbjct: 130 GVV----AWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSRPEDG 182
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR 479
L++ ML +GI P++ ++S + I++ K+ ++A L
Sbjct: 183 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSL--- 239
Query: 480 LSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPS 539
+S + KCG L + W ++ E D+ + +I+G G + A+ + E + P
Sbjct: 240 ISMYCKCGELGDAW-KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 298
Query: 540 RLIYSKLYNKLLASN 554
+ + + LLA N
Sbjct: 299 WITFVAV---LLACN 310
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
K + K++ ++N ++ + + LK+ R + EGI N LS G +
Sbjct: 155 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 214
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTII 302
QI + D +L L+ CK + A F +K K +V +N +I
Sbjct: 215 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK---DVVAWNAMI 271
Query: 303 AGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYV 362
+G+++ G + + M+++ PD TF ++L AG + + F+++V +DY
Sbjct: 272 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV-RDYK 330
Query: 363 LETSV--YNAMISNFISVGDLDEAIKYYRCL 391
+E Y M+ G L+EA+K R +
Sbjct: 331 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 361
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 171/426 (40%), Gaps = 46/426 (10%)
Query: 114 EESKVVADLFLLPEEKLRGVFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGG-E 172
+ SK+ A FL ++ Q S +E LA+ V L + + L R + +
Sbjct: 17 QPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQ 76
Query: 173 AMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIV 232
+ + FF WA + Y L + D + ++ R E VN++T+ IV
Sbjct: 77 SGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIV 136
Query: 233 ADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIP 292
+A +A+ + EF DT
Sbjct: 137 LTLCNQANLADEALWVLRKFPEFNVCADT------------------------------- 165
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
YN +I ++ G + +++ M G PD T+ S++ G AG+I+DA ++
Sbjct: 166 ---VAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN----CDPDIDTYTKLIS 408
+ + D VL + Y+ ++ GD++ A++ + + P+ TYT +I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM--MIYKRARKAGC 466
AF + R+V +AL +LD M +G +P+ T I+ + A+ +I K + G
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV 342
Query: 467 KIS--LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
+S S+ + L+R+ R+ + I+ M G D ++ LC + + +
Sbjct: 343 SLSECFSSATVSLIRMKRWEEAE---KIFRLMLVRGVRPDGLACSHVFRELCLLERYLDC 399
Query: 525 VLVMEE 530
L+ +E
Sbjct: 400 FLLYQE 405
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 19/293 (6%)
Query: 271 LCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
LC+ V A F+ ++ + NV T+ T+I G+ + +V +K+ E M E
Sbjct: 182 LCREGRVDEARLIFDEMRER---NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV--- 235
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
++ S+L G +GRIEDA + F+ + K + NAMI F VG++ +A + +
Sbjct: 236 -SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI----ACNAMIVGFGEVGEISKARRVFDL 290
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ D D T+ +I A+ + +AL++ +M QG+ PS ++ S + +
Sbjct: 291 ME----DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEY 510
++ A C+ Y ++ ++ + KCG L+ + + + S D+ ++
Sbjct: 347 LQYGRQVH--AHLVRCQFDDDVYVASVL-MTMYVKCGELVKA-KLVFDRFSSKDIIMWNS 402
Query: 511 IINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
II+G + G E A+ + E G P+++ + + K+E ++F
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 7/225 (3%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M +D ++ +++A +K F L + ++ +G+ + +L + +
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
Q+ + F D +VL+ K + A F+ K ++ +N+II+G+
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK---DIIMWNSIISGY 407
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ G + KI M G P+ T ++L AG++E+ L+IF+++ K V T
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 366 -SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
Y+ + G +D+A++ + S PD + L+ A
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMEL---IESMTIKPDATVWGALLGA 509
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 113/290 (38%), Gaps = 14/290 (4%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRD------LRTEGITVNLETLSI 231
F A + K+I Y +R L K +++ ++L + + EG + L
Sbjct: 58 FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 117
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKI 291
AQ+V F E S N LL F + GK+
Sbjct: 118 RVGMFENAQKV------FDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 292 PF--NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
+VA+YNT+I G G + +++ + G PD TF+ LL G+ E+
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+I+ +VEK+ + YNA + +E + + L N PD+ T+T +I
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
F+ K+ +A+ E+ G P S + +C G +A + K
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQVCQMKKI 317
D S N L++ LC + A + + + KG P ++ T+N ++ G+ + ++I
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI-TFNILLHESYTKGKFEEGEQI 234
Query: 318 LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
MVE D ++++ L GL + E+ + +FD L + + + AMI F+S
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
G LDEAI +Y+ + N C P + L+ A KA + A E+ E+ + ++
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAG---CKISL 470
+ ++ L A I + A+ CK+ L
Sbjct: 355 LQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKLRL 390
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 128/284 (45%), Gaps = 13/284 (4%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEA------MVEDGFTPDCSTFDSLLQGLGRAGRIE 347
N+A Y + + + +++ILE M ++GF ++ GR G E
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVA------RIINLYGRVGMFE 123
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKL 406
+A K+FD + E++ +NA+++ ++ D ++ L + +PD+ +Y L
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
I +A+ ++DE+ +G+ P T + + G I+ R +
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
K + +Y L+ L+ K +++++++++ + D+ + +I G + G+L+ A+
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT 303
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAAR 570
+E G P + +++ L + + +E AY+L +I A R
Sbjct: 304 WYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKR 347
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 87/202 (43%)
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
PD +++++L++GL G +A+ + D + K + +N ++ + G +E +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCS 447
+ ++ N DI +Y + K + + + D++ G + P T T+ I+ S
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 448 FGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV 507
G A+ YK K GC+ + LL + + G + +E+ D V
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 508 YEYIINGLCNIGQLENAVLVME 529
+ +++ L + + A ++E
Sbjct: 355 LQEVVDALVKGSKQDEAEEIVE 376
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 167/388 (43%), Gaps = 12/388 (3%)
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
SYN +++ L ++ I+ + ++ ++ +++T IV + L + A I
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
EE G + ++ L K+ V A F + G P +A Y +I +++ G+
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIA-YMIMINTYARNGR 632
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ + +++E +V+ P T+ L+ G + G +E + D ++E +Y A
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA----RKVADALEMLDEM 426
+I +F+ GD + + + N+ D Y L+S +A +K +E E
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK 752
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
L Q ++ T + S L ++G AM + + +K+ +L + ++ G+
Sbjct: 753 LLQRLI-RTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP-NLYLHNTIITGYCAAGRL 810
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
N E MQ+ G ++ Y ++ G +E+A+ + E + + P +++YS L
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTL 867
Query: 547 YNKLLASNKVERAYKLFLKIKAARSNEN 574
L + A L L+++ + N N
Sbjct: 868 LKGLCDFKRPLDALALMLEMQKSGINPN 895
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/546 (19%), Positives = 201/546 (36%), Gaps = 110/546 (20%)
Query: 131 RGVFLQKLNGKSAI-ESALA-----NTGVDLSLDVVAKTLYRGNLGGEAMV--IFFNWAI 182
R V + ++G S+I E+AL + G++L + + G+ V F+N +
Sbjct: 63 REVIRRVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRV 122
Query: 183 KQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
I D + ++ L K + D L + G + + S+V D L R
Sbjct: 123 IGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRF 182
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG--KIPFNVATYNT 300
+A F +E G G L + LC H+ A + + G ++P V Y +
Sbjct: 183 LEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKS 242
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+ + K G + + + + M DG+ D + L++ + + A++++ +VE+
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 361 YVLETSVYNAMISNFISVGDLDEA---------------IKYYRCLLSNNCDP------- 398
+ L+ ++N +I F+ +G LD+ + Y ++ + C
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 399 --------------DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT------- 437
++ YT LI F K + A+++L ML GIVP T
Sbjct: 363 RLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKM 422
Query: 438 -------------VTSFIEPLCSFGPP----------HAAMMIYKRARK---------AG 465
+ S ++ C PP ++ + ARK A
Sbjct: 423 LPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAV 482
Query: 466 CKISLSAYKLLLMRLSRFGK------------------CGMLLNIWEEM-------QESG 500
+L + + + LSR K C NI E++ QE
Sbjct: 483 VTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD 542
Query: 501 YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
+ D++ Y ++N LC + A +++ G P+ IYS + L +V A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 561 KLFLKI 566
+ F K+
Sbjct: 603 ETFAKM 608
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 197/473 (41%), Gaps = 52/473 (10%)
Query: 148 LANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFI 207
L T + S + V K L++ N+ E + N + +P D+ +Y +++ L KK
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENII-EDLASLVNIIQELDFVP-DVDTYLIVVNELCKKNDR 563
Query: 208 DFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVL 267
D ++ + G+ + S + L + RV +A + F E G D + ++
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 268 LQCLCKRSHVRAANSYFN-AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
+ + + AN VK + + TY +I+G+ K+G + + + L+ M+EDG
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIF----DNLVEKDYV----LETSVYNAM------- 371
+P+ + +L+ + G + + +F +N ++ D++ L + ++ AM
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQ 743
Query: 372 --------------------------ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
+ N+ S E I + + P++ +
Sbjct: 744 VIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK----KSIIPNLYLHNT 799
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
+I+ + A ++ +A L+ M +GIVP+ T T ++ G +A+ +++
Sbjct: 800 IITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTN 856
Query: 466 CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAV 525
C+ Y LL L F + L + EMQ+SG + + + YE ++ LC AV
Sbjct: 857 CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAV 916
Query: 526 LVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF-LKIKAARSNENARR 577
V+++ P + ++ L L K+ A LF + +++ RS N +
Sbjct: 917 KVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTK 969
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 148/377 (39%), Gaps = 40/377 (10%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I +++H Y ++ KK +D + +L + GI + T ++ L + + A+
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
I + + G G + ++ L K + + +A + V T A S
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVT----TALCS 489
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ + + +I E MV G TP +++S+++ L + IED + + + E D+V
Sbjct: 490 QRNYIAALSRI-EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV---- 544
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
PD+DTY +++ K A ++D M
Sbjct: 545 -------------------------------PDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
G+ P+ +S I L G A + + ++G + AY +++ +R G+
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ EE+ + Y +I+G +G +E +++ L G P+ ++Y+ L
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 547 YNKLLASNKVERAYKLF 563
L + ++ LF
Sbjct: 694 IGHFLKKGDFKFSFTLF 710
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 167/454 (36%), Gaps = 86/454 (18%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
++P I +Y V+L+ L K + + + +L+ + G +N + + + V+ +
Sbjct: 409 IVPDHI-TYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVE----- 462
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS----YFNAVKGKIPFNVATYNTI 301
+ G L V+ LC + + AA S N +PF +YN++
Sbjct: 463 -SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPF---SYNSV 518
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCST----------------------------- 332
I + + + ++ + E F PD T
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 333 ------FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
+ S++ LG+ GR+ +A + F ++E + Y MI+ + G +DEA +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLC 446
++ + P TYT LIS F+K + + LD+ML G+ P+ T+ I
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFL 698
Query: 447 SFGPPHAAMMIYKRARKAGCKISLSAYKLLL----------------------MRLSRFG 484
G + ++ + K AY LL L R
Sbjct: 699 KKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLI 758
Query: 485 KCGMLLNIWEEMQESGYSS-DMEV--------------YEYIINGLCNIGQLENAVLVME 529
+ L++I + G S MEV + II G C G+L+ A +E
Sbjct: 759 RTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLE 818
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+G P+ + Y+ L + + +E A LF
Sbjct: 819 SMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 140/356 (39%), Gaps = 31/356 (8%)
Query: 235 GLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF--NAVKGKIP 292
G ++ + K +F + G + + ++++ CK +V A F N I
Sbjct: 316 GFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDIS 375
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
NV Y +I G+ K G + + +L M+++G PD T+ LL+ L + ++ A+ I
Sbjct: 376 RNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVI 435
Query: 353 FDNLVEKDYVLETSVYNAM-----------------ISNFISVG------------DLDE 383
++++ + V + + +N +VG +
Sbjct: 436 LQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIA 495
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A+ +++ C P +Y +I + + D +++ + VP T +
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
LC AA I + G + +++ Y ++ L + G+ + +M ESG
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 504 DMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERA 559
D Y +IN G+++ A ++EE + PS Y+ L + + +E+
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 161/386 (41%), Gaps = 23/386 (5%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVA--------DGLV 237
M +D+ S+N ++ + +++ L M + E +V+L+ +IV+ L
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE--SVDLDHATIVSMLPVCGHLKDLE 235
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVAT 297
+ V+K + EE G E N L+ K + A F+ ++ + +V T
Sbjct: 236 MGRNVHKLV------EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR---DVIT 286
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
+ +I G+++ G V ++ M +G P+ T SL+ G A ++ D + V
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA 417
+ + + ++IS + +D + + + P ++ +I+ ++ V+
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVS 402
Query: 418 DALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
DAL + M + + P+ T+ S + + AM I+ K G SL A L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC 537
S+ G I+ +QE S D+ ++ +I+G G NA+ V E + G
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLF 563
P+ + ++ N S VE LF
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLF 548
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 97/225 (43%), Gaps = 5/225 (2%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
++ I+ + + + L + + +R E + N+ TL+ + + +A+ I
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTIIAGWSKIGQVC 312
+ GF ++ L+ K + +A+ FN ++ K +V + +I+G+ G
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
++ MV G TP+ TF S L +G +E+ L +F ++E L S + I
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 373 SNFIS-VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ + G LDEA Y + + +P + L++A + V
Sbjct: 568 VDLLGRAGRLDEA---YNLITTIPFEPTSTVWGALLAACVTHENV 609
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N+AT N+++ ++ + + Q I + + GF L+ + G +E A KIF
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ + EK + ++ A+IS + GD A++ + ++ + P+ T+T ++A +
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 414 RKVADALEMLDEML 427
V + L + ML
Sbjct: 539 GLVEEGLTLFRFML 552
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 114/290 (39%), Gaps = 35/290 (12%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETL----SIVADGL----- 236
M +D+ ++ ++ + ++ L++ R ++ EG+ N T+ S+ D L
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 237 -------VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG 289
VR Q+VY I I E+ + + CKR + F G
Sbjct: 339 KCLHGWAVR-QQVYSDIII-------------ETSLISMYAKCKR-----VDLCFRVFSG 379
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
++ ++ IIAG + V + + M + P+ +T +SLL + A
Sbjct: 380 ASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA 439
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+ I L + ++ ++ + G L+ A K + + + D+ + LIS
Sbjct: 440 MNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK 459
+ +AL++ EM+ G+ P+ T TS + G + +++
Sbjct: 500 YGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TYN++I G+ K +V K++L++M G +PD TF +L+ G +A R+++ ++IF +
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ V T Y +I F VGDLD A ++S PD T+ +++ +++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 417 ADALEMLDEM 426
A +L+++
Sbjct: 132 RKAFAILEDL 141
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 35/166 (21%)
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
T YN+MI F +D+A + + S C PD+ T++ LI+ + KA++V + +E+
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFG 484
EM +GIV +T T T+ I C G AA
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ----------------------------- 100
Query: 485 KCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
++ EM G + D + ++ GLC+ +L A ++E+
Sbjct: 101 ------DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 140
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 40/189 (21%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
W+I P I +YN ++ K+ +D +ML + ++G + ++ T S + +G
Sbjct: 1 MLRWSI----FPTTI-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 55
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVA 296
+A+RV ++IF G I N
Sbjct: 56 CKAKRVDNGMEIFCEMHRRG----------------------------------IVANTV 81
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T+I G+ ++G + + +L M+ G PD TF +L GL + A I ++L
Sbjct: 82 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Query: 357 VE-KDYVLE 364
+ +D+ LE
Sbjct: 142 QKSEDHHLE 150
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 157/391 (40%), Gaps = 51/391 (13%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHS---YNVILRA 200
+E L + LS + V + L + FF+W HS YN LR
Sbjct: 213 VERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRV 272
Query: 201 LGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCD 260
L + + ++ +++T G ++L+T V+ +++ + + ++++ + F
Sbjct: 273 LARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPS 332
Query: 261 TESLNVLLQCLCKRSH------VRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQM 314
+ ++LL+ L + R + Y + K + A Y+ I + +G+ +
Sbjct: 333 IQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKS---LSKAVYDGIHRSLTSVGRFDEA 389
Query: 315 KKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISN 374
++I +AM G+ PD T+ L+ GL +A R+E+A + D +
Sbjct: 390 EEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME----------------- 432
Query: 375 FISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPS 434
+ C PDI T+T LI K ++ AL ML +G
Sbjct: 433 ------------------AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDID 474
Query: 435 TGTVTSFIEPLCSFGP-PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIW 493
+ + I+ A++ + + + A K S YKLL+ +L + K L++
Sbjct: 475 SNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL 534
Query: 494 EEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
+ M++ Y + E ++ L G LE+A
Sbjct: 535 QMMKKQNYPAYAEAFD---GYLAKFGTLEDA 562
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/545 (18%), Positives = 204/545 (37%), Gaps = 119/545 (21%)
Query: 105 YRNNQSNKLEESKVVADLFLL--------PEEKLRGVFLQKLNGKSAIESALANTGVDLS 156
+ +N S+ L+ +V FL P+ L+ V + + +E L + L+
Sbjct: 31 FSSNLSSPLDSFAIVPSRFLWKFRTFSSKPDSMLQLVL--ENDWSKEVEEGLRKPDMSLT 88
Query: 157 LDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRD 216
+ L + E F +W ++ + Y+++LR L +++ + LR+
Sbjct: 89 HETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLRE 148
Query: 217 LRTEGITVNLETLSIV----------ADGLVRA---QRVYK-------AIQIFGNTEEFG 256
++ G ++ +T + AD + A +R+ K A ++ +
Sbjct: 149 MKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGD 208
Query: 257 FGCDTE----------SLNVLLQCLCK-RSHVRAANSYFNAVKGKI-----PFNVATYNT 300
+ C+ E S N +++ L + R H A ++F+ V G + TYN
Sbjct: 209 WSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNA 268
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKD 360
+ ++ V + +++ M G+ D T+ + + ++ + + +K+++ +++
Sbjct: 269 ALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGP 328
Query: 361 Y-------------------------------------VLETSVYNAMISNFISVGDLDE 383
+ L +VY+ + + SVG DE
Sbjct: 329 FKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDE 388
Query: 384 AIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
A + + + + +PD TY++L+ KA+++ +A +LD+M QG P T T I+
Sbjct: 389 AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQ 448
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSS 503
C + + L + M E G+
Sbjct: 449 GHC-----------------------------------KNNELDKALACFANMLEKGFDI 473
Query: 504 DMEVYEYIINGLCNIGQLENA-VLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKL 562
D + + +I+G + E A + +ME + P + Y L +KLL K E A L
Sbjct: 474 DSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDL 533
Query: 563 FLKIK 567
+K
Sbjct: 534 LQMMK 538
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 159/402 (39%), Gaps = 45/402 (11%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
Y ++ LGK + M ++ ++ + + V RA R+ AI +F +
Sbjct: 49 YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLH 108
Query: 254 EFGFGCDTESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQV 311
EF + S + LLQ + K S + AA F ++ + N ++ ++ +
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRS 168
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI----FDNLVEKDYVLETSV 367
++ + M G PD ++ L++G G++E+A + F + +K + V
Sbjct: 169 DLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVV 228
Query: 368 YNAMISNFISVGDLDEAIKYY------------RC------------------------- 390
Y ++ G++D+AI+ RC
Sbjct: 229 YRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTE 288
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
L P +D+Y+ + + + K+ + E+L M +G P+ + ++ LC G
Sbjct: 289 TLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGK 348
Query: 451 -PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM-QESGYSSDMEVY 508
A +I K + C ++ Y +L+ L GK + ++M ++ ++ E Y
Sbjct: 349 LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 509 EYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
+ +++GLC GQ A VMEE L K P Y + L
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 153/360 (42%), Gaps = 53/360 (14%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTES----LNVLLQCLCKRSHVRAANSYFNAV--KG 289
+V+ + A IF ++ +G + S LN+L++ LC+ + A+ F + +G
Sbjct: 126 MVKESELEAACHIF---RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMV----EDGFTPDCSTFDSLLQGLGRAGR 345
P + +Y ++ G+ G++ + +L +M + G D + LL L AG
Sbjct: 183 CYP-DRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE 241
Query: 346 IEDALKIFDNLVEKDY----------------------------VLETSV---------Y 368
++DA++I ++ K + ET + Y
Sbjct: 242 VDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+AM ++ G L E + + S +P Y + A +A K+ +A+ ++++ +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 429 QG-IVPSTGTVTSFIEPLCSFGPPHAAM-MIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
QG +P+ G I+ LC G A+ + K +++ C + Y+ L+ L R G+
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ EEM + +E Y +I GLC++ + AV+ +EE + + P ++ L
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 125/289 (43%), Gaps = 41/289 (14%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGKIP---FNVATYNTIIAGWSKIGQVCQMKKILEAM 321
++L Q L K+ + A F K + P N + Y T+I K +V +MK ++E M
Sbjct: 13 SLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERM 72
Query: 322 VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDL 381
ED S F S+++ RAGR+EDA+ +F +L E + V + ++ ++ + +L
Sbjct: 73 KEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESEL 132
Query: 382 DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
+ A +R C Y +++ I A +
Sbjct: 133 EAACHIFR----KYC------YGWEVNSRITA------------------------LNLL 158
Query: 442 IEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK----CGMLLNIWEEMQ 497
++ LC A +++ GC +Y++L+ GK +L +++ +
Sbjct: 159 MKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRIS 218
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+ G D+ VY +++ LC+ G++++A+ ++ + L KG + Y +
Sbjct: 219 QKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLC 272
M + +R + ++ +I+ GL +A + +A IF N G D ++ N++++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 273 KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
S RA Y ++ + + TYN++I G K ++ Q +K+ + CST
Sbjct: 59 -SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCST 108
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
F++L+ G +A R++D + +F + + V Y +I F VGD + A+ ++ ++
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEML 423
SN T+ ++ +++ A+ ML
Sbjct: 169 SNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHV-RAANSYFNAVKGKIPFNVATYNTIIAGWS 306
+F E DT N+++ LCK A N + N + + +V TYN +I +S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+G+ +K+ M+ G PD T++S++ GL + ++ A K+ + S
Sbjct: 60 SLGRA---EKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS---------CS 107
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
+N +I+ + + + + + + ++ TYT LI F + AL++ EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 427 LGQGIVPSTGTVTSFIEPLCS 447
+ G+ S+ T + LCS
Sbjct: 168 VSNGVYSSSITFRDILPQLCS 188
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 52/240 (21%)
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQ--GLGRAGRIED 348
+ + A YN II G K G+ + I ++ G PD T++ +++ LGRA
Sbjct: 10 MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAE---- 65
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
K++ ++ + V +T YN+MI L +A K +S +C T+ LI+
Sbjct: 66 --KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK-----VSKSCS----TFNTLIN 114
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKI 468
+ KA +V D + + EM +GIV + T T+ I G + A
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTA-------------- 160
Query: 469 SLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVM 528
L+I++EM +G S + I+ LC+ +L AV ++
Sbjct: 161 ---------------------LDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 161/343 (46%), Gaps = 28/343 (8%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
N+ + + + DG ++ R+ KA+++F E + S N +++ L +R + A + F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 285 NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ + +V ++ ++ G +K G+V + +++ + M E ++++++ G +
Sbjct: 195 ERMPRR---DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNN 247
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
RI++A ++F + E+D+ + +N MI+ FI ++++A + + N + ++T
Sbjct: 248 RIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEKN----VISWT 299
Query: 405 KLISAFIKARKVADALEMLDEMLGQGIV-PSTGTVTSFIEPLCSFGPPHAAMMIYKRARK 463
+I+ +++ ++ +AL + +ML G V P+ GT S + I++ K
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 464 A-GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGY--SSDMEVYEYIINGLCNIGQ 520
+ K + LL M + K G L+ +M ++G D+ + +I + G
Sbjct: 360 SVHQKNEIVTSALLNM----YSKSGELIAA-RKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 521 LENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+ A+ + + GF PS + Y L + VE+ + F
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 273 KRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
K +R A F+ V + NV T+ +++G+ + Q+ + + + M E +
Sbjct: 89 KLGDMREARELFDRVDSRK--NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----S 142
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+++++ G ++GRI+ AL++FD + E++ V +N+M+ + G +DEA+ + +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
D+ ++T ++ K KV +A + D M + I+ +T + +
Sbjct: 199 RR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 121/256 (47%), Gaps = 33/256 (12%)
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
Q+ ++ ++ P + L+ L + G+I +A K+FD L E+D V T V I
Sbjct: 29 QLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHV----I 84
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
+ +I +GD+ EA + + + S ++ T+T ++S ++++++++ A + EM + +V
Sbjct: 85 TGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV 141
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
+ + I+ G A+ ++ + S K L+ R G+ +N+
Sbjct: 142 ----SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQR----GRIDEAMNL 193
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFC-PSRLIYSKLYNKLL 551
+E M D+ + +++GL G+++ A + + C P R I S +N ++
Sbjct: 194 FERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFD-------CMPERNIIS--WNAMI 240
Query: 552 A----SNKVERAYKLF 563
+N+++ A +LF
Sbjct: 241 TGYAQNNRIDEADQLF 256
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 171/387 (44%), Gaps = 19/387 (4%)
Query: 159 VVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLR 218
V+A L + G ++ + I Q I +I +YN+I +A + + L+ + L
Sbjct: 136 VLAAQLRQAKYGA---LLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYK-LF 191
Query: 219 TEGITVN--LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSH 276
+ +N + T I+ GLV + KA++I + GF D + L+ K S
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 277 VRAANSYFNAVKGKIPFNV---ATYNTIIAGW-SKIGQVCQMKKILEAMVEDG-FTPDCS 331
+ +K K+ V Y ++ G+ K + M+ EA+ E+
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 332 TFDSLLQGLGRAGRIEDALKIFDNLVEKDY------VLETSVYNAMISNFISVGDLDEAI 385
++ +L+ L G+ ++ALK+FD V+K++ + +N M++ + + G +EA+
Sbjct: 312 AYNYVLEALSENGKFDEALKLFD-AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 386 KYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPL 445
+ +R + C PD ++ L++ +A+A ++ EM + + P T ++
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 446 CSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDM 505
G YK ++ + +L+ Y L +L + GK + + +M S D
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDD 489
Query: 506 EVYEYIINGLCNIGQLENAVLVMEESL 532
E Y++I+ L G+L+ + +++E L
Sbjct: 490 EAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 43/273 (15%)
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGK------IPFNVATYNTIIAGWSKIGQVCQMKKIL 318
N +L+ L + A F+AVK + + N+ T+N ++ G+ G+ + ++
Sbjct: 314 NYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVF 373
Query: 319 EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
M + +PD +F++L+ L + +A K++ + EK+ + Y ++
Sbjct: 374 RQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKE 433
Query: 379 GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
G +DE YY+ ++ +N P++ Y +L IKA K+ DA D
Sbjct: 434 GKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-------------- 479
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM-Q 497
MM+ K K+ AYK ++ LS G+ +L I +EM
Sbjct: 480 ----------------MMVSK------LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
Query: 498 ESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ E+ E++ L G+ + +MEE
Sbjct: 518 DDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG-FTPDCSTFDSLLQGLGRAGRIEDA 349
I N+ TYN I + + + + + +++ P +TF L++GL +E A
Sbjct: 161 IAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKA 220
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCL---LSNNCDPDIDTYTKL 406
++I +++ K +V++ VY+ ++ + D D +K Y+ L L D + Y +L
Sbjct: 221 MEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGV-VYGQL 279
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
+ + +A+E +E +G+ +
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGEN---------------------------------SKV 306
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG-----YSSDMEVYEYIINGLCNIGQL 521
++S AY +L LS GK L +++ +++ + ++ + ++NG C G+
Sbjct: 307 RMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 522 ENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
E A+ V + P L ++ L N+L + + A KL+
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 166/409 (40%), Gaps = 41/409 (10%)
Query: 185 PMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYK 244
P P+ I +N LR L + + + +R G ++ + + + + +++
Sbjct: 71 PSPPESI-VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
+++ G + CD + + A + F+ + + +V T+NT+I
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR---DVVTWNTMIER 186
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ + G V + K+ E M + PD +++ GR G + I++ L+E D ++
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMD 246
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNN-------------C--------------D 397
T + A+++ + G +D A +++R + N C
Sbjct: 247 THLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Query: 398 PDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
D+ +T +ISA++++ +AL + +EM GI P ++ S I + G A +
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 458 YKRARKAGCKISLSAYKLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIING 514
+ G + LS L ++ + KCG L +++E+M S + +IN
Sbjct: 367 HSCIHVNGLESELSINNAL---INMYAKCGGLDATRDVFEKMPRRNVVS----WSSMINA 419
Query: 515 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
L G+ +A+ + + P+ + + + S VE K+F
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 126/307 (41%), Gaps = 18/307 (5%)
Query: 163 TLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML------RD 216
+L G + +V F A + +I Y+ +R L K + ++ ++L RD
Sbjct: 46 SLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRD 105
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTE--SLNVLLQCLCKR 274
+ EG + +L A AQ+V++ + C S N LL
Sbjct: 106 MSKEGFAARIISLYGKAGMFENAQKVFEEMP--------NRDCKRSVLSFNALLSAYRLS 157
Query: 275 SHVRAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
FN + GK+ ++ +YNT+I + + + +L+ + G PD T
Sbjct: 158 KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVT 217
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
F++LL G+ E +I+ +VEK+ ++ YNA + + E + + L
Sbjct: 218 FNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELK 277
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPH 452
++ PD+ ++ +I I K+ +A E++ G P T + +C G
Sbjct: 278 ASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFE 337
Query: 453 AAMMIYK 459
+A+ ++K
Sbjct: 338 SAIELFK 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 136/324 (41%), Gaps = 55/324 (16%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEA------MVEDGFTPDCSTFDSLLQGLGRAGRIE 347
N+A Y+ + ++ +++ILE M ++GF ++ G+AG E
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAA------RIISLYGKAGMFE 126
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKL 406
+A K+F+ + +D +NA++S + D + + L + PDI +Y L
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF--GPPHAAMMIYKRARKA 464
I A + + +A+ +LDE+ +G+ P T + + L S+ G I+ + +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL--LSSYLKGQFELGEEIWAKMVEK 244
Query: 465 GCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESG------------------------ 500
I + Y L+ L+ K L+N++ E++ SG
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 501 -----------YSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNK 549
Y D + ++ +C G E+A+ + +E+ K + + +L ++
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 550 LLASNKVERAYKLFLKIKAARSNE 573
L+ +K E A ++ +K A++N+
Sbjct: 365 LVKGSKREEAEEI---VKIAKTND 385
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FN + I DI SYN +++AL +K + + +L ++ +G+ ++ T + +
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 237 VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNV 295
+ +I+ E D + N L L + + + F +K + +V
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
++N +I G G++ + + + +V+ G+ PD +TF LL + +AG E A+++F
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
K Y++ + ++ + +EA + + +N+
Sbjct: 346 TFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTND 385
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 12/247 (4%)
Query: 206 FIDFMLKMLRDLRTEGITVNLETLS------IVADGLVRAQRVYKAIQIFGNTEEFGFGC 259
+D L++ RDL I+ +++L+ +VA A+RVY I++ + +G
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVY--IEM---PKMYGIEP 185
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKIL 318
D E+ N +++ C+ ++ S ++ K I N +++ +I+G+ + ++ K+L
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 319 EAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
M + G ST++ +Q L + + ++A + D ++ T Y+ +I F +
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 379 GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
D +EA K ++ +++ C PD + Y LI K AL + E + + VPS +
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 439 TSFIEPL 445
S + L
Sbjct: 366 KSLVNGL 372
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 124/333 (37%), Gaps = 74/333 (22%)
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLL-QCLCKRSHVRAANSYFNAVK--GKIPFN 294
+A + ++++F + E+F +SLN LL CL + + A Y K G P +
Sbjct: 128 QANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP-D 186
Query: 295 VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
+ TYN +I + + G I+ M G P+ S+F GL
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF-----GL-------------- 227
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
MIS F + DE K + + + TY I + K +
Sbjct: 228 ----------------MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYK 474
K +A +LD ML G+ P+T T + I C+ A ++K GCK
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK------- 324
Query: 475 LLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
D E Y +I LC G E A+ + +ES+ K
Sbjct: 325 ----------------------------PDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+ PS I L N L +KVE A +L ++K
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVK 389
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 192 HSYNVILRALGKKKFIDFMLKMLRDL-----RTEGITVNLETLSIVADGLVRAQRVYKAI 246
H+Y+++L+A+ + K + L+M R+L R V L +I G R VY+
Sbjct: 177 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG--RINNVYETE 234
Query: 247 QIFGNTEEFG-FGCD-TESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
+I+ + G G + T SL V + C RS + A + Y V KI +I+
Sbjct: 235 RIWRVMKGDGHIGTEITYSLLVSIFVRCGRSEL-ALDVYDEMVNNKISLREDAMYAMISA 293
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+K + KI ++M++ G P+ ++L+ LG+AG++ K++ L + +
Sbjct: 294 CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPD 353
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNN-CDPDIDTYTKLISAFIKARKVADALEML 423
+NA+++ ++ ++ + + S N C + Y + + K A+++L
Sbjct: 354 EYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLL 413
Query: 424 DEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
EM G G+ ST + I A+++Y+ + CK + Y L L+R +
Sbjct: 414 YEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTY-LSLVRSCIW 472
Query: 484 GKCGMLLNIWEEMQE--SGYSSDMEVYEYIINGLC 516
G ++W+E+++ D+ +Y I+G+C
Sbjct: 473 G------SLWDEVEDILKKVEPDVSLYNAAIHGMC 501
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 134/361 (37%), Gaps = 39/361 (10%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
N ETLS L R +V A+++F + G + + N L CL + ++ A + F
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 285 N---------------------AVKG-----------------KIPFNVATYNTIIAGWS 306
VKG + F+V YNT I+
Sbjct: 166 EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG 225
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+I V + ++I M DG T+ L+ R GR E AL ++D +V L
Sbjct: 226 RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED 285
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
AMIS D A+K ++ +L P++ LI++ KA KV ++ +
Sbjct: 286 AMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVL 345
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG-CKISLSAYKLLLMRLSRFGK 485
G P T + + L + ++ R C ++ Y ++ + G
Sbjct: 346 KSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGY 405
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
+ + EM+ SG + Y +I+ + + A+LV E + P+ Y
Sbjct: 406 WEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLS 465
Query: 546 L 546
L
Sbjct: 466 L 466
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/410 (18%), Positives = 172/410 (41%), Gaps = 40/410 (9%)
Query: 171 GEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLS 230
GEA+++F + M ++ S++ ++ + +D + + R + + + L
Sbjct: 153 GEALLLF------EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLC 202
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGCD--TESLNVLLQCLCKRSHVRAANSYFNAV- 287
+ GL++ +R+ +A + G G + + N L+ +R V AA F+ +
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Query: 288 -----------KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
+ + NV ++N++I + K+G V + + + M + D +++++
Sbjct: 263 DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTM 318
Query: 337 LQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNC 396
+ G R+EDA +F + +D +N M+S + SVG+++ A Y+
Sbjct: 319 IDGYVHVSRMEDAFALFSEMPNRD----AHSWNMMVSGYASVGNVELARHYFE----KTP 370
Query: 397 DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM 456
+ ++ +I+A+ K + +A+++ M +G P T+TS + M
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
+++ K + + L+ SR G+ I++EM+ ++ + +I G
Sbjct: 431 MHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYA 486
Query: 517 NIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
G A+ + G PS + + + N + V+ A F+ +
Sbjct: 487 FHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM 536
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
++R+ + +A IF E +T + N ++ KR + A F+ + + +V
Sbjct: 50 MIRSGYIAEARDIFEKLE----ARNTVTWNTMISGYVKRREMNQARKLFDVMPKR---DV 102
Query: 296 ATYNTIIAGWSKIGQVC---QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKI 352
T+NT+I+G+ G + + +K+ + M + D ++++++ G + RI +AL +
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 353 FDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
F+ + E++ V ++AMI+ F G++D A+ +R + + P L++ IK
Sbjct: 159 FEKMPERNAV----SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIK 210
Query: 413 ARKVADALEMLDE 425
++++A +L +
Sbjct: 211 NERLSEAAWVLGQ 223
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 131/315 (41%), Gaps = 22/315 (6%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQ-RVYKAIQIFGNTEEFGFGCDTESLNVLLQ 269
L++L ++ G ++ + +++ L ++ + +I + + + D E+LN L+Q
Sbjct: 548 LRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQ 607
Query: 270 CLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTP 328
CK+ R + F+ V+ P + TY ++I + K + + + A D + P
Sbjct: 608 EYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLP 667
Query: 329 DCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYY 388
D + L L R G +E+ +++F+ + + ++ + +G A
Sbjct: 668 DLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVV 727
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSF 448
+ L C + + Y LI +K + A +LDEML + +PS G+ I LC
Sbjct: 728 KRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLC-- 785
Query: 449 GPPHAAMMIYKRARKAGCKISLS-------AYKLLLMRLSRFGKCGMLLNIWEEMQESGY 501
RA KAG +L+ + L+ LS GK N M +G
Sbjct: 786 -----------RANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGL 834
Query: 502 SSDMEVYEYIINGLC 516
SS ++Y + G C
Sbjct: 835 SSYNKIYNVMFQGYC 849
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/270 (18%), Positives = 116/270 (42%), Gaps = 28/270 (10%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
P + YN+++ + + K + K+L +++ G+ + T + + G + +++
Sbjct: 906 PGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLR 965
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSK 307
G + SL + LC V+ A + ++ K GW+
Sbjct: 966 YLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK-------------GWN- 1011
Query: 308 IGQVCQMKKILEAMVEDGFTPDCSTF--------------DSLLQGLGRAGRIEDALKIF 353
+G KI+E ++ G P F D++++ L G ++ A+ +
Sbjct: 1012 LGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLL 1071
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ +++ + +S Y+++I+ + LD+A+ ++ ++ P I T++ L+ F +A
Sbjct: 1072 NTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEA 1131
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIE 443
+V ++ ++ M+G G PS + I+
Sbjct: 1132 CQVLESERLIKSMVGLGESPSQEMFKTVID 1161
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/414 (18%), Positives = 165/414 (39%), Gaps = 36/414 (8%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D++SYN IL L +K +L +++ G+ ++L T I+ G +A++ +A +I
Sbjct: 392 DVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIV 451
Query: 250 GNTEEFGFGCD---------TESLNVL----LQCLCKRSH--VRAANSYFNAVKGKIPFN 294
FG+G +E+ +++ L KR + + +F+ + + +
Sbjct: 452 NKM--FGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLH 509
Query: 295 ------------------VATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSL 336
+ +N++I S+ G + ++L+ M G +F L
Sbjct: 510 TDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVL 569
Query: 337 LQGL-GRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
++ L + ++ + + + Y L+ N ++ + G + + ++ +
Sbjct: 570 MRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMH 629
Query: 396 CDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
D TYT LI F K + D L + +P L G +
Sbjct: 630 HPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVV 689
Query: 456 MIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL 515
+++R + A ++ + +L+ G + ++ + ++ G + EVY ++I GL
Sbjct: 690 QLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGL 749
Query: 516 CNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
C + A +++E L K PS L +L +NK A+ L +I ++
Sbjct: 750 CTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS 803
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 135/347 (38%), Gaps = 34/347 (9%)
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIAGWSKIGQ 310
E GF D + +L+ C ++ A Y + + KG P +V +YN I++G + G
Sbjct: 350 EHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKP-DVYSYNAILSGLFRKGL 408
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
IL+ M E+G STF ++ G +A + E+A +I + + + + V +
Sbjct: 409 WQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDP 468
Query: 371 MISNFISVGDLDEAIKYYR------------CLLSNN--CDPDIDTYTKLI--------- 407
+ F VG A++ R L N D+D Y + +
Sbjct: 469 LSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVL 528
Query: 408 ----SAFIKARKVAD---ALEMLDEMLGQGIVPSTGTVTSFIEPLC-SFGPPHAAMMIYK 459
S ++A + D AL +LDEM G S + + LC S ++ + +
Sbjct: 529 PEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLE 588
Query: 460 RARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIG 519
+ K ++ L+ + G I+ +M + + D Y +I C
Sbjct: 589 KWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKE 648
Query: 520 QLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
L + + V + + + P L+N L+ VE +LF ++
Sbjct: 649 TLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERV 695
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 2/259 (0%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
D ++N ++ L+ L + ++G+ N +L V L V KA+ ++
Sbjct: 943 DETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLW 1002
Query: 250 GNTEEFGFGCDTESLNV-LLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
E G+ + + +++ L + + A + V + Y+ II S
Sbjct: 1003 QVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVT-RNGMMAPNYDNIIKKLSDR 1061
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + +L M+++ P S++DS++ GL R +++ A+ +VE S +
Sbjct: 1062 GNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
+ ++ F + E+ + + ++ P + + +I F + A EM++ M
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 429 QGIVPSTGTVTSFIEPLCS 447
G T S I + S
Sbjct: 1182 CGYEVDFETHWSLISNMSS 1200
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 5/238 (2%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMV---EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFD 354
Y T++ G+ K G+V ++LEAM + PD T+ +++ AG ++ A ++
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 355 NLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKA 413
+ YN ++ + +D A R + + +PD+ +Y +I I
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR-ARKAGCKISLSA 472
A AL +EM +GI P+ + T+ ++ G P A ++ K+ L A
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 473 YKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ +L+ R G + M+E+G+ ++ Y + NG+ + +A+L+ +E
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 170/401 (42%), Gaps = 37/401 (9%)
Query: 190 DIHSYNVILR---ALGKKKFIDFMLKMLRDLRTEGITVNLETL-SIVA-----DGLVRAQ 240
D+ +YNV+++ +G+K+ I F+L+ + D +GI V + T+ S+VA L A+
Sbjct: 270 DVLTYNVMIKLCARVGRKELIVFVLERIID---KGIKVCMTTMHSLVAAYVGFGDLRTAE 326
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNT 300
R+ +A++ E+ C VL +C + + + + Y+
Sbjct: 327 RIVQAMR-----EKRRDLC-----KVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSA 376
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDG---------FTPDCSTFDSLLQGLGRAGRIEDALK 351
S+ G V KK+L V+ F PD + +L++G + GR+ D +
Sbjct: 377 R-DEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTAR 435
Query: 352 IFDNLVEKD---YVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
+ + + +D + Y ++S F++ G +D A + + + TY L+
Sbjct: 436 MLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLK 495
Query: 409 AFIKARKVADALEMLDEML-GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCK 467
+ K ++ A ++L EM GI P + I+ A+ + R G
Sbjct: 496 GYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
Query: 468 ISLSAYKLLLMRLSRFGKCGMLLNIWEEM-QESGYSSDMEVYEYIINGLCNIGQLENAVL 526
+ +Y L+ + G+ + +++EM + D+ + ++ G C +G +E+A
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
V+ GF P+ Y L N + + K A L+ +IK
Sbjct: 616 VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTE-GITVNLETLSIVADGLVRAQRVYKA 245
+P + +YNV+L+ K+ ID +LR++ + GI ++ + +I+ DG + A
Sbjct: 483 VPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGA 542
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNVATYNTIIA 303
+ F G S L++ + AN F+ + ++ ++ +N ++
Sbjct: 543 LAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
G+ ++G + ++++ M E+GF P+ +T+ SL G+ +A + DAL ++ + E+
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 10/252 (3%)
Query: 185 PMIPK----DIHSYNVILRALGKKKFIDFMLKMLRDLRTE---GITVNLETLSIVADGLV 237
P++PK D Y +++ K + +ML +R + + T + V V
Sbjct: 404 PLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFV 463
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV--KGKIPFNV 295
A + +A Q+ G + + NVLL+ CK+ + A + I +V
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
+YN II G I M G P ++ +L++ +G+ + A ++FD
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 356 LVEKDYV-LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
++ V ++ +N ++ + +G +++A + + N P++ TY L + +AR
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 415 KVADALEMLDEM 426
K DAL + E+
Sbjct: 644 KPGDALLLWKEI 655
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 29/309 (9%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY T+++ + G + + +++L M G + T++ LL+G + +I+ A + +
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 357 VEKDYVLETSV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
E D +E V YN +I I + D A+ ++ + + P +YT L+ AF +
Sbjct: 514 TE-DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 415 KVADALEMLDEMLGQGIVPSTGTVTS-FIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+ A + DEM+ V + +E C G A + R ++ G +++ Y
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQE----------SGYSSD-----MEVYEYIINGLCNI 518
L +S+ K G L +W+E++E S SSD ++ E +++ L +I
Sbjct: 633 GSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADI 692
Query: 519 ----GQLENAVLVMEESLHKGFCPSRLIYSKLY----NKLLASNKVERAYKLFLKIKAAR 570
+ A+ ++ G P++ Y K+Y +++ S +A ++ +++ R
Sbjct: 693 CVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQA-RIDRRVERKR 751
Query: 571 SNENARRFW 579
+ E A +FW
Sbjct: 752 AAE-AFKFW 759
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 24/278 (8%)
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR--IEDALKIFDNLVEK---- 359
+K GQ ++++M+ G+ P + + + L +G E+++K+F + +
Sbjct: 164 AKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRRVKRF 223
Query: 360 -DYVL------ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIK 412
D L +T+ +NA+++ ++GD D+ K + + +C+PD+ TY +I +
Sbjct: 224 GDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCAR 283
Query: 413 ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI---YKRARKAGCKIS 469
+ + +L+ ++ +GI T+ S + FG A I + R+ CK+
Sbjct: 284 VGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKV- 342
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQ--LENAVLV 527
L ++ + + +E+ ++SGYS+ EV E G+ ++ + L N+V
Sbjct: 343 LRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSE---EGVVDVFKKLLPNSVDP 399
Query: 528 MEES--LHKGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
E L K F P IY+ L + + +V ++
Sbjct: 400 SGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARML 437
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR---------AG 344
N TY T+I G + G ++I + MV DG PD T++ LL GL + AG
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
++ED +F +L K Y MIS F G +EA +R + + PD TY
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 405 KLISAFIKARKVADALEMLDEM 426
LI A ++ A + E++ EM
Sbjct: 135 TLIRAHLRDGDKAASAELIKEM 156
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 10/188 (5%)
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+++F + ++ V T Y +I GD D A + ++ ++S+ PDI TY L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 410 FIK---------ARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
K A KV D ++ + +G+ P+ T T+ I C G A ++++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 461 ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQ 520
++ G Y L+ R G + +EM+ ++ D Y + + L + G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GR 179
Query: 521 LENAVLVM 528
L+ L M
Sbjct: 180 LDKGFLEM 187
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
+++ R++ G+ N T + + GL +A A +IF G D + N+LL
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 271 LCKRSHVRAANSYFN-----------AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
LCK + A ++KG P NV TY T+I+G+ K G + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKP-NVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
M EDG PD T+++L++ R G + ++ + + + S Y ++++ + G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDG 178
Query: 380 DLDEAI 385
LD+
Sbjct: 179 RLDKGF 184
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
++ M + G + T+ +L+QGL +AG + A +IF +V + YN ++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 376 ISVGDLDEAIKYYR--------CLLS-NNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
G L++A+ + C LS P++ TYT +IS F K +A + +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
G +P +GT + I G A+ + K R S Y L+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 455 MMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIING 514
M +++ + G + Y L+ L + G C M I++EM G D+ Y +++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 515 LCNIGQLENAVLV--MEESLH-------KGFCPSRLIYSKLYNKLLASNKVERAYKLFLK 565
LC G+LE A++ +E+ KG P+ + Y+ + + E AY LF K
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 566 IK 567
+K
Sbjct: 121 MK 122
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 14/190 (7%)
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNA-VKGKIPFNVATYNTIIAG 304
+++F + G +T + L+Q L + A F V +P ++ TYN ++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 305 WSKIGQVCQMKKILEAMVEDGFT-----------PDCSTFDSLLQGLGRAGRIEDALKIF 353
K G++ K ++ VEDG+ P+ T+ +++ G + G E+A +F
Sbjct: 61 LCKNGKL--EKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ E + ++ YN +I + GD + + + + S D TY +
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Query: 414 RKVADALEML 423
R LEML
Sbjct: 179 RLDKGFLEML 188
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
N T IV G R RV ++ +E + N L+ + +
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVL 318
Query: 285 NAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRA 343
+K + +V TY+T++ WS G + + ++ + MV+ G PD + L +G RA
Sbjct: 319 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Query: 344 GRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTY 403
+ A ++ + L+ + ++ +IS + S G +D+A++ + + P+I T+
Sbjct: 379 KEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 404 TKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
L+ +++ ++ A E+L M G G+ P T
Sbjct: 438 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 471
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 194 YNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTE 253
+N ++ A + ++ ++ L ++ G+ T + + G A + ++ ++
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 254 EFG---FGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKI 308
E G G + + NVL+Q CK+ V A ++ G P + TYNTI + +
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP-DTVTYNTIATCYVQK 236
Query: 309 GQVCQMK-KILEAMV-EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
G+ + + +++E MV ++ P+ T ++ G R GR+ D L+ + E
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
V+N++I+ F+ V D D + + N D+ TY+ +++A+ A + A ++ EM
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 427 LGQGIVP 433
+ G+ P
Sbjct: 357 VKAGVKP 363
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 29/341 (8%)
Query: 256 GFGCDT-ESLNVLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVC 312
G C T S L+ L +R A + F A G P ++ +Y T++A + Q
Sbjct: 39 GSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRP-SLISYTTLLAAMTVQKQYG 97
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ I+ + + G D F++++ +G +EDA++ + E TS YN +I
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 373 SNFISVGDLDEAIKYYRCLL-SNNCD--PDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+ G + + + +L N D P+I T+ L+ A+ K +KV +A E++ +M
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC 217
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAA-------MMIYKRARKAG--CKISLSAYKLLLMRL 480
G+ P T T + G A M++ ++A+ G C I + Y
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGY------- 270
Query: 481 SRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI---GQLENAVLVMEESLHKGFC 537
R G+ L M+E +++ V+ +ING + ++ + +M+E K
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKA-- 328
Query: 538 PSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+ YS + N ++ +E+A ++F ++ A +A +
Sbjct: 329 -DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 368
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 132/295 (44%), Gaps = 14/295 (4%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDL-----RTEGITVNLETLSIVADG-LVRAQ-RV 242
+I ++NV+++A KKK ++ ++++ + R + +T N V G VRA+ V
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTI 301
+ + + + G C +++ C+ VR + +K ++ N+ +N++
Sbjct: 247 VEKMVMKEKAKPNGRTC-----GIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I G+ ++ + ++L M E D T+ +++ AG +E A ++F +V+
Sbjct: 302 INGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV 361
Query: 362 VLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALE 421
+ Y+ + ++ + +A + L+ + P++ +T +IS + + DA+
Sbjct: 362 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMR 420
Query: 422 MLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+ ++M G+ P+ T + + P A + + R G K S + LL
Sbjct: 421 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 326 FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAI 385
+ P+ + L+ LG+ + E A ++F ++ + V+ VY A++S + G D A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 386 KYY-RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIE- 443
R S+NC PD+ TY+ LI +F++ ++L +M QGI P+T T F+E
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT---FVEM 262
Query: 444 ----------------------PLCSFGPPHAAMMI---YKRARKAGCKISLSAYKLLLM 478
L +FG M+ Y++ + +G + ++ + +LL
Sbjct: 263 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 322
Query: 479 RLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLEN 523
+ G + + E MQ+ YS + Y +I+ G L+
Sbjct: 323 SYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 112/271 (41%), Gaps = 30/271 (11%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVR----------A 239
D+H+Y++++++ + D + +L D+R +GI N T + L++ +
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEMESTLIQMLGEDDCKPDS 279
Query: 240 QRVYKAIQIFGNT----------EEF---GFGCDTESLNVLLQCLCKRSHVRAANSYFNA 286
+ ++ FG E+F G + + N+LL K + + ++
Sbjct: 280 WTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEY 339
Query: 287 V-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR 345
+ K + + TYN +I + + G + QM+ + M + P C T SL++ GRA +
Sbjct: 340 MQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASK 399
Query: 346 IEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTK 405
+ + + D L+ +N ++ + + E + PD TY
Sbjct: 400 ADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRT 459
Query: 406 LISAFIKARKVADALEMLDEMLGQGIVPSTG 436
++ A+ +++ + E+ G+V S G
Sbjct: 460 MVKAY----RISGMTTHVKEL--HGVVESVG 484
>AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:513607-515604 FORWARD
Length = 665
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/433 (18%), Positives = 176/433 (40%), Gaps = 53/433 (12%)
Query: 144 IESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGK 203
+E L + ++ DVV L + ++ ++FF W + D +YN + R LGK
Sbjct: 234 VEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGK 293
Query: 204 KKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTES 263
+KF+D M+ ++R+ G + +ET V+ + + + +A+++F EF +
Sbjct: 294 EKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELF----EFAMAGSISN 349
Query: 264 L------NVLLQCLCKRSHV------RAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQV 311
++LL+ + + R +Y G + +V + ++ + +
Sbjct: 350 TPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG--NGNVVPDVMLQH-VLKSLRSVDRF 406
Query: 312 CQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
Q ++L+AM E G+ P + GL R G+ ++A ++ + + L+ ++
Sbjct: 407 GQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASL 466
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDID-TYTKLISAFIKARKVADALEMLDEMLGQG 430
+ DL+EA + ++ ++ + KL+ A+ + + D ++ E++ Q
Sbjct: 467 VEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQN 526
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLL 490
P H+ I R LL+ +++R G L
Sbjct: 527 ----------------QLKPWHSTYKIMVR-------------NLLMKKVARDGGFEEAL 557
Query: 491 NIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKL 550
++ M+ G+ ++ + ++ L N G A ++ K F PS + +++ +
Sbjct: 558 SLLPMMRNHGFPPFVDPF---MDYLSNSGTSAEAFAFLKAVTSKKF-PSNSMVLRVFEAM 613
Query: 551 LASNKVERAYKLF 563
L S + A L
Sbjct: 614 LKSARHSEAQDLL 626
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 12/274 (4%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEG-ITVNLETLSIVADGLVRAQRVYK 244
M +++ ++ ++ K F + + +R EG + VN TL+++ R +
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
QI G D N L+ K ++ A + F +K K + ++N++I G
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK---DSVSWNSLITG 350
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ Q+ + ++ E M D ++ +++G G I +++F + EKD +
Sbjct: 351 LVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNI-- 404
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ AMIS F+S G +EA+ ++ +L P+ T++ ++SA + + L++
Sbjct: 405 --TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIY 458
++ IV S + C G + A I+
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 16/263 (6%)
Query: 278 RAANSYFNAVKGKIPF--NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDS 335
R +F+ +K ++ + +V Y ++ + ++G++ ++ M+E G PD +
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGT 228
Query: 336 LLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNN 395
+L R GR L + + E+ +L TSVYN M+S+ + I + ++
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 396 CDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAM 455
P+ TYT ++S++ K +AL+ EM G VP T +S I G A+
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 456 MIYKRARKAG-------CKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVY 508
+Y+ R G C LS Y + + K L+++ +M+ + +D +
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLY----YKTENYPKA---LSLFADMERNKIPADEVIR 401
Query: 509 EYIINGLCNIGQLENAVLVMEES 531
II +G +A + EE+
Sbjct: 402 GLIIRIYGKLGLFHDAQSMFEET 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 133/339 (39%), Gaps = 2/339 (0%)
Query: 232 VADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS-YFNAVKGK 290
V VR V KA I G + E++ L+ ++ ++ A Y A + K
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 291 IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDAL 350
P + ++I + + G + + E G P T L+ L G+ +A
Sbjct: 701 TP-GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 351 KIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAF 410
I +EK+ L+T YN +I + G L A + Y + ++ I TY +IS +
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 411 IKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISL 470
+ ++ A+E+ G+ T+ I G A+ ++ +K G K
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 471 SAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+Y +++ + + + + M+ +G +D+ Y +I Q A +
Sbjct: 880 PSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
KG S +S L + L+ + +E A + + K+ A
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEA 978
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 133/335 (39%), Gaps = 46/335 (13%)
Query: 228 TLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV 287
T+SI+ + L + +A I E DT N L++ + + ++ A+ + +
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM 800
Query: 288 KGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI 346
+P ++ TYNT+I+ + + Q+ + +I G D + +++ G+ G++
Sbjct: 801 HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKM 860
Query: 347 EDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+AL +F + +K T YN M+ + E + + + N D+ TY L
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTL 920
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
I + ++ + A+A + + + +GI S +S + L A MM + A + C
Sbjct: 921 IQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK-----AGMM--EEAERTYC 973
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVL 526
K+S E+G S D I+ G G E +L
Sbjct: 974 KMS----------------------------EAGISPDSACKRTILKGYMTCGDAEKGIL 1005
Query: 527 VMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYK 561
E ++I S + + S+ VE YK
Sbjct: 1006 FYE----------KMIRSSVEDDRFVSSVVEDLYK 1030
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+P I +YN ++ G+ +D +++ + R G+ ++ + + + + ++ +A+
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEAL 864
Query: 247 QIFGNTEEFGFGCDTESLNVLLQ-CLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIA 303
+F ++ G T S N++++ C R H + A++ G+ +++TY T+I
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLH-HEVDELLQAMERNGRCT-DLSTYLTLIQ 922
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
+++ Q + +K + + E G S F SLL L +AG +E+A + + + E
Sbjct: 923 VYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP 982
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
+++ ++ +++ GD ++ I +Y ++ ++ + D
Sbjct: 983 DSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 9/254 (3%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGL 236
FF+W Q + Y ++LR G+ I KM + E + V E ++ +
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKI----KMAEETFLEMLEVGCEPDAVACGTM 229
Query: 237 V----RAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS-HVRAANSYFNAVKGKI 291
+ R R + + +E T N +L L K+S H + + + V+ +
Sbjct: 230 LCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGV 289
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
P N TY +++ ++K G + K M GF P+ T+ S++ +AG E A+
Sbjct: 290 PPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIG 349
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+++++ + V M+S + + +A+ + + N D +I +
Sbjct: 350 LYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYG 409
Query: 412 KARKVADALEMLDE 425
K DA M +E
Sbjct: 410 KLGLFHDAQSMFEE 423
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 116/260 (44%), Gaps = 2/260 (0%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
I D YN +++A+ + + ++ + T G+ +++T + + R ++ KAI
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGW 305
+IF N G D + ++ K + A S F+ ++ K I +YN ++
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC 889
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ ++ ++L+AM +G D ST+ +L+Q + + +A K + EK L
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSH 949
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
S +++++S + G ++EA + Y + PD ++ ++ + ++
Sbjct: 950 SHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEK 1009
Query: 426 MLGQGIVPSTGTVTSFIEPL 445
M+ + V V+S +E L
Sbjct: 1010 MI-RSSVEDDRFVSSVVEDL 1028
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 140/374 (37%), Gaps = 54/374 (14%)
Query: 178 FNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLV 237
FN KQ +Y + + LG K D + + +EG+ ++ + +
Sbjct: 131 FNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYG 190
Query: 238 RAQRVYKAIQIFGNTEEFGFGC--DTESLNVLLQCLCKRSHVRAANSYFNAVKG------ 289
+++ + KA + C D + VL+ C CK F+ VK
Sbjct: 191 KSELLDKAFSTLEYMKSVS-DCKPDVFTFTVLISCCCKLGR-------FDLVKSIVLEMS 242
Query: 290 --KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDG---------------------- 325
+ + TYNTII G+ K G +M+ +L M+EDG
Sbjct: 243 YLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 326 --------------FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAM 371
PD +TF+ L+ G+AG + + D + ++ + L T YN +
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 372 ISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
I F G +++ +R + P+ TY L++A+ KA V +L +++ +
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDV 422
Query: 432 VPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN 491
V T I G +Y + + CK + ++ + G +
Sbjct: 423 VLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQE 482
Query: 492 IWEEMQESGYSSDM 505
+ ++M SG + D+
Sbjct: 483 LEKQMISSGENLDI 496
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 148/343 (43%), Gaps = 20/343 (5%)
Query: 192 HSYNVILRALGKK-KFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
+S+N ++R L + L + R ++ G+ + T + V + + + +
Sbjct: 93 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 152
Query: 251 NTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQ 310
+ + G D + L+ K V A F+ + + + ++N++I+G+S+ G
Sbjct: 153 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER---DTVSWNSMISGYSEAGY 209
Query: 311 VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNA 370
+ M E+GF PD T S+L G + + + + K L T + +
Sbjct: 210 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 269
Query: 371 MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQG 430
+IS + GDLD A + + ++ D +T +I+ + + K ++A ++ EM G
Sbjct: 270 LISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 325
Query: 431 IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRL-SRFGKCGML 489
+ P GT+++ + S G A+ + K+ ++SL + L +GKCG +
Sbjct: 326 VSPDAGTLSTVLSACGSVG----ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 381
Query: 490 ---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
L ++E M ++ + +I + G + A+L+ +
Sbjct: 382 EEALRVFEAMPVKNEAT----WNAMITAYAHQGHAKEALLLFD 420
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALK 351
PF +N++I+G++++GQ + M EDG PD TF +L+ G G ++
Sbjct: 160 PF---AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
I +LV++ + + V NA++ + GD+ +A R + D ++ +++ ++
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA----RNVFDMIPHKDYVSWNSMLTGYL 272
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
+ +AL++ M+ GI P ++S + + SF ++ + G + LS
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF---KHGRQLHGWVIRRGMEWELS 329
Query: 472 AYKLLLMRLSRFGKCGMLLNIWEEMQE 498
L++ S+ G+ G I+++M E
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLE 356
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 283 YFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
YF + + + T+ ++ IG V + I +V++GF D ++L+ +
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPD 399
G I A +FD + KDYV +N+M++ ++ G L EA+ +R ++ N +PD
Sbjct: 243 CGDIVKARNVFDMIPHKDYV----SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 128/332 (38%), Gaps = 72/332 (21%)
Query: 238 RAQRVYKAIQIFGNTEEFGFGCDTESLNVLL-QCLCKRSHVRAANSYFNAVKGKIPFNVA 296
RA + ++IQ F N E++ +SLN LL CL + + A Y
Sbjct: 123 RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYL------------ 170
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
+M K+ G PD T++ +++ L +G + I +
Sbjct: 171 ----------------EMPKMY------GIEPDLETYNRMIRVLCESGSTSSSYSIVAEM 208
Query: 357 VEKDYVLETSV-YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
E+ ++ T+ + MI F DE K R + + TY +I K +K
Sbjct: 209 -ERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
A+A ++D ++ + P++ T + I CS AM
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAM-------------------- 307
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKG 535
N++E M +GY D E Y +I+ LC G E A+++ ES+ K
Sbjct: 308 ---------------NLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
Query: 536 FCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
+ PS + L N L + +KV+ A +L +K
Sbjct: 353 WVPSFSVMKWLVNGLASRSKVDEAKELIAVVK 384
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 5/271 (1%)
Query: 156 SLDVVAKTLY-RGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRA-LGKKKFIDFMLKM 213
S V A LY R N+ ++ F N ++Q IP+ + S N +L A L K + +
Sbjct: 112 SFAVRAIILYGRANMLDRSIQTFRN--LEQYEIPRTVKSLNALLFACLMAKDYKEANRVY 169
Query: 214 LRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCK 273
L + GI +LET + + L + + I E S +++ K
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 274 RSHVRAANSYFNAV-KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
+ + + VATYN +I K + + K +++ ++ P+ T
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ L+ G +++A+ +F+ +V Y ++ Y +I GD + A+ R +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEML 423
N P L++ KV +A E++
Sbjct: 350 EKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/300 (18%), Positives = 123/300 (41%), Gaps = 8/300 (2%)
Query: 187 IPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAI 246
+ KD S+ +++ L + ++ R+++ +G+ ++ V + +
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGK 290
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
QI F + L+ CK + A + F+ +K K NV ++ ++ G+
Sbjct: 291 QIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK---NVVSWTAMVVGYG 347
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ G+ + KI M G PD T + +E+ + + + +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
V N++++ + GD+D++ + L + D ++T ++SA+ + + + +++ D+M
Sbjct: 408 VSNSLVTLYGKCGDIDDSTR----LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK-RARKAGCKISLSAYKLLLMRLSRFGK 485
+ G+ P T+T I G +K + G S+ Y ++ SR G+
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGR 523
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M K++ S+ ++ G+ + +K+ D++ GI + TL + +
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
Q G G N L+ K + + FN + + + ++ +++ +
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR---DAVSWTAMVSAY 447
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
++ G+ + ++ + MV+ G PD T ++ RAG +E + F L+ +Y +
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF-KLMTSEYGIVP 506
Query: 366 SV--YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
S+ Y+ MI F G L+EA+++ + PD +T L+SA
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSA 549
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 32/278 (11%)
Query: 261 TESLNVLLQCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
T S+ L++CL + V+ A + F +K +V YNTII ++G + + +L+
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 320 AMVEDGF--TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFIS 377
M GF PD T+ L+ R G ++T A+
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYG------------------MQTGCRKAIRRR--- 263
Query: 378 VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGT 437
+ EA + +R +L PD+ TY LI K ++ ALE+ ++M +G VP+ T
Sbjct: 264 ---MWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 438 VTSFIEPLCSFGPPHAAMMIYKRARKAGCKI-SLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
SFI A+ + + +K G + S Y L+ L + ++ EM
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 497 QESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
E+G + EY +C+ E ++E LHK
Sbjct: 381 VEAG----LVPREYTYKLVCDALSSEGLASTLDEELHK 414
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
G+ +V +T ++T ++ L G A+ + R ++ CK + AY ++ L R G
Sbjct: 159 GKNVV-TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFK 217
Query: 488 MLLNIWEEMQESG--YSSDMEVYEYIINGLCNIG-----------QLENAVLVMEESLHK 534
+ ++MQ G Y D Y +I+ C G ++ A + E L +
Sbjct: 218 KARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFR 277
Query: 535 GFCPSRLIYSKLYNKLLASNKVERAYKLF--LKIKAARSNE 573
GF P + Y+ L + +N++ RA +LF +K K N+
Sbjct: 278 GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
>AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4013166-4014630 REVERSE
Length = 367
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
+ +P+ + N II +++ Q+ ++ IL+ M E PD T++S+L LGRAG +
Sbjct: 170 ESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVN 229
Query: 348 DALKIFDNLVEKDYV-LETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKL 406
+ L + + E V + YN +++ D + Y ++ +PD+ +YT +
Sbjct: 230 EILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAV 289
Query: 407 ISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMI 457
I + ++ V ++L + DEM + I PS + I+ L G +A+ +
Sbjct: 290 IDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 209 FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLL 268
++ +L+++ + L ++ + +++ K + I +E+ D + N +L
Sbjct: 160 YLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVL 219
Query: 269 QCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
L + V + +K + N+ TYNT++ G K + I MV+ G
Sbjct: 220 DILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGI 279
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
PD ++ +++ LGR+G ++++L++FD + ++ VY A+I GD A++
Sbjct: 280 EPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQ 339
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYR-CL 391
+ +L++ R G + A + +L EK+ L SV+ +++ + D+ + + +R L
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 392 LSNNCDP-DIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ +P D Y L AFI +L E+ + + I
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 451 PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQES-GYSSDMEVYE 509
+MI K ++ CK + Y +L L R G +L + M+E S ++ Y
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 510 YIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
++NG+ + + +++ E + G P L Y+ + + L S V+ + +LF ++K
Sbjct: 253 TVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 159/396 (40%), Gaps = 59/396 (14%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
+++ D+R +G+ T+S V + Q G D LL
Sbjct: 259 IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNF 318
Query: 271 LCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
CK + A F+ + K +V T+N II+G+ + G V + + M + DC
Sbjct: 319 YCKVGLIEYAEMVFDRMFEK---DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 331 STFDSLLQGLGRA-----------------------------------GRIEDALKIFDN 355
T +L+ R G I DA K+FD+
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
VEKD +L +N +++ + G EA++ + + P++ T+ +I + ++ +
Sbjct: 436 TVEKDLIL----WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKL 475
V +A +M +M GI+P+ + T+ + + G A++ ++ +++G + + + +
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 476 LLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGL--CNIGQLENAVLVMEESLH 533
L C L ++ ++ YII L ++ +E +++ M
Sbjct: 552 AL------SACAHLASL---------HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAA 569
++ SKLY++L SN + AY L+ +K A
Sbjct: 597 DINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEA 632
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/386 (18%), Positives = 162/386 (41%), Gaps = 41/386 (10%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M KD+ ++N+I+ ++ ++ + M + +R E + + TL+ + R
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR------- 387
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
TE G + +QC C R + ++ +T++ +
Sbjct: 388 ------TENLKLGKE-------VQCYCIRHSFES--------------DIVLASTVMDMY 420
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+K G + KK+ ++ VE D +++LL +G +AL++F + +
Sbjct: 421 AKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
+N +I + + G +DEA + + S+ P++ ++T +++ ++ +A+ L +
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M G+ P+ ++T + H I+ + SL + + L+ + + K
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDM--YAK 594
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
CG +N E++ S S++ + +I+ G L+ A+ + G P + +
Sbjct: 595 CGD-INKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 546 LYNKLLASNKVERAYKLFLKIKAARS 571
+ + + + +A ++F I + RS
Sbjct: 654 VLSACNHAGDINQAIEIFTDIVSKRS 679
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 116/259 (44%), Gaps = 9/259 (3%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFG 250
I +N I+ + + ++ L + G++ ++ T + V A + +K I
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKGIDFLS 161
Query: 251 NT-EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
+T G C+ + L++ + + + F+ V K + +N ++ G++K G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK---DCVIWNVMLNGYAKCG 218
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ + K M D +P+ TFD +L I+ +++ +V E S+ N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+++S + G D+A K +R ++S D T+ +IS ++++ + ++L EM+
Sbjct: 279 SLLSMYSKCGRFDDASKLFR-MMSR---ADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 430 GIVPSTGTVTSFIEPLCSF 448
G++P T +S + + F
Sbjct: 335 GVLPDAITFSSLLPSVSKF 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 12/311 (3%)
Query: 133 VFLQKLNGKSAIESALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIH 192
V L+ G + +++ G+D + + VA +L + L E I + ++ KD
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCN-EFVASSLIKAYL--EYGKIDVPSKLFDRVLQKDCV 205
Query: 193 SYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNT 252
+NV+L K +D ++K +R + I+ N T V + +Q+ G
Sbjct: 206 IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265
Query: 253 EEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVC 312
G + N LL K A+ F + + T+N +I+G+ + G +
Sbjct: 266 VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA---DTVTWNCMISGYVQSGLME 322
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ M+ G PD TF SLL + + +E +I ++ L+ + +A+I
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDP-DIDTYTKLISAFIKARKVADALEMLDEMLGQGI 431
+ + A + + C+ D+ +T +IS ++ D+LEM ++ I
Sbjct: 383 DAYFKCRGVSMAQNIF-----SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 432 VPSTGTVTSFI 442
P+ T+ S +
Sbjct: 438 SPNEITLVSIL 448
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQC---LCKRSHVRAANSYFNAVKGKIPFNVATYNTI 301
AI IF G D S++ L L S +A + + +K + +V + +T+
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM--IKHSLASDVYSESTL 583
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDY 361
I ++K G + + + M E +++S++ G G+++D+L +F +VEK
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIV----SWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 362 VLETSV-YNAMISNFISVGDLDEAIKYYRCLLSN-NCDPDIDTYTKLISAFIKARKVADA 419
+ + + +IS+ VGD+DE ++++R + + P + Y ++ F +A ++ +A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 420 LEMLDEM 426
E + M
Sbjct: 700 YETVKSM 706
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 126/300 (42%), Gaps = 7/300 (2%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M +D +YN ++ L + + + +++ + + +G+ + TL+ + +++
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
Q+ T + GF + + LL K + + A YF + + NV +N ++ +
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE---NVVLWNVMLVAY 465
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ + +I M + P+ T+ S+L+ R G +E +I +++ ++ L
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
V + +I + +G LD A +L D+ ++T +I+ + + AL +
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWD----ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
ML +GI +T+ + I+ +A +G L L+ SR GK
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
Query: 180 WAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRA 239
W I KD+ S+ ++ + F D L R + GI + L+
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 240 QRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYN 299
Q + + QI GF D N L+ + + SY + + N+A +N
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE--ESYLAFEQTEAGDNIA-WN 661
Query: 300 TIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
+++G+ + G + ++ M +G + TF S ++ ++ ++ + +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
Y ET V NA+IS + G + +A K + + + N ++ ++ +I+A+ K ++A
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN---EV-SWNAIINAYSKHGFGSEA 777
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFG 449
L+ D+M+ + P+ T+ + G
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 126/306 (41%), Gaps = 10/306 (3%)
Query: 189 KDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQI 248
KD S+ ++ L K + +++ D+ GI S V + + + Q+
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 249 FGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKI 308
G + GF DT N L+ ++ +A F+ + + + TYNT+I G S+
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR---DAVTYNTLINGLSQC 367
Query: 309 GQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
G + ++ + M DG PD +T SL+ G + ++ + + +
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 369 NAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLG 428
A+++ + D++ A+ Y+ L + ++ + ++ A+ + ++ + +M
Sbjct: 428 GALLNLYAKCADIETALDYF---LETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 429 QGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGM 488
+ IVP+ T S ++ G I+ + K L+AY ++ + + K G
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVL-IDMYAKLGK 540
Query: 489 LLNIWE 494
L W+
Sbjct: 541 LDTAWD 546
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 156/383 (40%), Gaps = 20/383 (5%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M +D+ S+N I+ + L + + GI ++L T+ V G ++ +
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
+ + F + N LL K + +A + F + + +V +Y ++IAG+
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR---SVVSYTSMIAGY 372
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
++ G + K+ E M E+G +PD T ++L R +++ ++ + + E D +
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
V NA++ + G + EA + S DI ++ +I + K +AL + +
Sbjct: 433 FVSNALMDMYAKCGSMQEA----ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 426 MLGQG-IVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY----KLLLMRL 480
+L + P TV + P A++ + + R+ I + Y + +
Sbjct: 489 LLEEKRFSPDERTVACVL-------PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 481 SRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSR 540
+ KCG LL + + + S D+ + +I G G + A+ + + G
Sbjct: 542 DMYAKCGALL-LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 541 LIYSKLYNKLLASNKVERAYKLF 563
+ + L S V+ ++ F
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFF 623
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 129/307 (42%), Gaps = 11/307 (3%)
Query: 181 AIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQ 240
A+ + M + + SY ++ ++ +K+ ++ EGI+ ++ T++ V + R +
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNT 300
+ + ++ +E G D N L+ K ++ A F+ ++ K ++ ++NT
Sbjct: 412 LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK---DIISWNT 468
Query: 301 IIAGWSKIGQVCQMKKILEAMVEDG-FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEK 359
II G+SK + + ++E+ F+PD T +L + +I ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 360 DYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADA 419
Y + V N+++ + G A+ L + D+ ++T +I+ + +A
Sbjct: 529 GYFSDRHVANSLVDMYAKCG----ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 584
Query: 420 LEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKI--SLSAYKLLL 477
+ + ++M GI + S + G + R CKI ++ Y ++
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE-CKIEPTVEHYACIV 643
Query: 478 MRLSRFG 484
L+R G
Sbjct: 644 DMLARTG 650
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
A Q+ G GF D N ++ K ++ +A F+ + + +V ++N++I+G
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER---DVVSWNSMISG 207
Query: 305 WSKIGQVCQMKKILEAMVE-DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
+S+ G KK+ +AM+ F P+ T S+ Q G++ + L++ ++E +
Sbjct: 208 YSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQM 267
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
+ S+ NA+I + G LD Y R L + D TY +IS ++ V +A+ +
Sbjct: 268 DLSLCNAVIGFYAKCGSLD----YARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 424 DEMLGQGIVPSTGTVTSFIE 443
EM G+ ++ ++
Sbjct: 324 SEMESIGLSTWNAMISGLMQ 343
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 149/364 (40%), Gaps = 18/364 (4%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M D+ ++NV++ GK+ ++ ++R + TL V + +
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
+ + + G + + L+ K + AA F A++ K N +N +I G+
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK---NDVFWNAMIRGY 403
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ G+ ++ ++ M G+ D TF SLL + +E + +++K
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
V NA++ + G L++A R + CD D T+ +I ++++ ++A ++
Sbjct: 464 FVGNALVDMYAKCGALEDA----RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGK 485
M GIV + S ++ + ++ + K G L L + + K
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL---IDMYSK 576
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLC---NIGQLENAVLVMEESLHKGFCPSRLI 542
CG++ + +SS E +N L + LE AV++ +E L +G PS +
Sbjct: 577 CGIIKD-----ARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEIT 631
Query: 543 YSKL 546
++ +
Sbjct: 632 FATI 635
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVAD--GLVRAQRVYKA 245
PK I + ++ + F + LK +++R +G+ + T V ++ + R +A
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 246 IQ--IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIA 303
I IF + D + N L+ K ++ ++ F+ ++ + NV ++N++I
Sbjct: 754 IHSLIFHLAHDL----DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS--NVVSWNSLIN 807
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G++K G KI ++M + PD TF +L AG++ D KIF+ ++ + Y +
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ-YGI 866
Query: 364 ETSVYNA--MISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
E V + M+ G L EA + + + N PD ++ L+ A
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDF---IEAQNLKPDARLWSSLLGA 911
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 115/274 (41%), Gaps = 42/274 (15%)
Query: 213 MLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNV-LLQCL 271
+ +++ T G+ + T + + + + + + Q G + GF + E L + LL
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 272 CKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD-- 329
+ A + F+ + P ++ + +++G S+ G + K + M DG PD
Sbjct: 676 MNSRGMTEACALFSELSS--PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 330 --------CSTFDSLLQG-------------------------LGRAGRIEDALKIFDNL 356
CS SL +G + G ++ + ++FD +
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ V+ +N++I+ + G ++A+K + + ++ PD T+ +++A A KV
Sbjct: 794 RRRSNVVS---WNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 417 ADALEMLDEMLGQ-GIVPSTGTVTSFIEPLCSFG 449
+D ++ + M+GQ GI V ++ L +G
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/348 (17%), Positives = 147/348 (42%), Gaps = 23/348 (6%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESL--NVLLQCLCKRSHVRAANSYFNAVKGKIPF 293
L A R+ KA+ +++ G D+E N ++ K + V A F+ ++
Sbjct: 72 LALALRIGKAV----HSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK---- 123
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
+V +N++++ +S IG+ ++ + ++ E+ P+ TF +L R +E +I
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
++++ + A++ + + +A + + ++ DP+ +T L S ++KA
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV----DPNTVCWTCLFSGYVKA 239
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+A+ + + M +G P + I G A +++ + A+
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP----DVVAW 295
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+++ + G + + + M++S S +++ + + L+ ++V E++
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRFWRA 581
G + + S L + K+E A K+F ++ E FW A
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-----EKNDVFWNA 398
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 29/229 (12%)
Query: 218 RTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESL---NVLLQCLCKR 274
RT T+ T ++ L R ++++A ++F + CD++S+ N ++
Sbjct: 9 RTYSTTIPPPTANVRITHLSRIGKIHEARKLFDS-------CDSKSISSWNSMVAGYFAN 61
Query: 275 SHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFD 334
R A F+ + + N+ ++N +++G+ K G++ + +K+ + M E ++
Sbjct: 62 LMPRDARKLFDEMPDR---NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWT 114
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
+L++G G+++ A +F + EK+ V + M+ F+ G +D+A K Y +
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMPEKNKV----SWTVMLIGFLQDGRIDDACKLYEMI--- 167
Query: 395 NCDPDIDTY--TKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
PD D T +I K +V +A E+ DEM + ++ T VT +
Sbjct: 168 ---PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 134/303 (44%), Gaps = 30/303 (9%)
Query: 267 LLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGF 326
++ LCK V A F+ + + +V T+ T++ G+ + +V +KI + M E
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSER---SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 327 TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIK 386
++ S+L G + GRIEDA ++F+ + K + NAMIS G++ +A +
Sbjct: 235 V----SWTSMLMGYVQNGRIEDAEELFEVMPVKPVI----ACNAMISGLGQKGEIAKARR 286
Query: 387 YYRCLLSNNCDPDIDTYTKLISAFIKARK--VADALEMLDEMLGQGIVPSTGTVTSFIEP 444
+ + N D T K I R +AL++ M QG+ P+ T+ S +
Sbjct: 287 VFDSMKERN-DASWQTVIK-----IHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 445 LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLN---IWEEMQESGY 501
S H ++ A+ C+ + Y ++ ++ + KCG L+ I++
Sbjct: 341 CASLASLHHGKQVH--AQLVRCQFDVDVYVASVL-MTMYIKCGELVKSKLIFDRFP---- 393
Query: 502 SSDMEVYEYIINGLCNIGQLENAVLVM-EESLHKGFCPSRLIYSKLYNKLLASNKVERAY 560
S D+ ++ II+G + G E A+ V E L P+ + + + + VE
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 561 KLF 563
K++
Sbjct: 454 KIY 456
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 113/267 (42%), Gaps = 13/267 (4%)
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+K + ++ ++E+ D + + +L++ G+A A++ F+ + +
Sbjct: 78 AKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSA 137
Query: 366 SVYNAMIS------NFISVGDL-DEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVAD 418
+NA+++ NF V L DE + Y N PD +Y LI ++ +
Sbjct: 138 VSFNALLNACLHSKNFDKVPQLFDEIPQRY-----NKIIPDKISYGILIKSYCDSGTPEK 192
Query: 419 ALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM 478
A+E++ +M G+G+ +T T+ + L G A ++ K GC++ +AY + +M
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIM 252
Query: 479 RLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
+ + + EEM G D Y Y++ C G L+ A V E P
Sbjct: 253 SAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 539 SRLIYSKLYNKLLASNKVERAYKLFLK 565
+ + L L S E+ Y +F K
Sbjct: 312 NAATFRTLIFHLCYSRLYEQGYAIFKK 338
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 47/348 (13%)
Query: 198 LRALGKKKFIDFMLKMLRDL---RTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEE 254
L G+ FI+ +L+ + L R EG V + I+ G +A +A+ F N +
Sbjct: 81 LAGAGRLDFIEDLLEHQKTLPQGRREGFIVRI----IMLYG--KAGMTKQALDTFFNMDL 134
Query: 255 FGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYNTIIAGWSKIGQVC 312
+G +S N LQ L + + + K I + ++N I + ++G +
Sbjct: 135 YGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILD 194
Query: 313 QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ M + G TPD T+ +L+ L + R V+ ++N M+
Sbjct: 195 GAYMAMREMEKSGLTPDVVTYTTLISALYKHERC---------------VIGNGLWNLMV 239
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
C P++ T+ I + R+ DA ++L M +
Sbjct: 240 LK--------------------GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVE 279
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNI 492
P + T I+ P A +Y G K +L Y+ ++ L + G + +
Sbjct: 280 PDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTM 339
Query: 493 WEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSR 540
++ + +++ E ++ GL GQL+ A +M E +H+ P R
Sbjct: 340 CKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPPFR 386
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 368 YNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
+N I +F +G LD A R + + PD+ TYT LISA K + + + M+
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 428 GQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL--MRLSRFGK 485
+G P+ T I+ L + A + K + Y +++ L+RF
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 299
Query: 486 CGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSK 545
M ++ M GY ++++Y+ +I+ LC G + A + ++ + K + P+
Sbjct: 300 --MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 546 LYNKLLASNKVERA 559
L L+ ++++A
Sbjct: 358 LLKGLVKKGQLDQA 371
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 45/294 (15%)
Query: 228 TLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAV 287
T V VR V+ QI G FGF + L+Q + A F+ +
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 288 KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIE 347
K +V +N ++AG+ K+G++ + + +LE M + + ++ ++ G ++GR
Sbjct: 178 LVK---DVNVWNALLAGYGKVGEMDEARSLLEMM--PCWVRNEVSWTCVISGYAKSGRAS 232
Query: 348 DALKIFDNL----VEKDYV--------------LE-----------------TSVYNAMI 372
+A+++F + VE D V LE S+ NA+I
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 373 SNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIV 432
+ G++ +A+ + C+ N + T+T +I+ A+AL M + M+ G+
Sbjct: 293 DMYAKSGNITKALDVFECVNERN----VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGK 485
P+ T + + G ++ R K G ++ Y ++ L R GK
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGK 402
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 34/274 (12%)
Query: 177 FFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKML------RDLRTEGITVNLETLS 230
FNWA +QP + SY++ +R LG K M ++ R + E + ++
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYF 217
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGC--DTESLNVLLQCLCKRSHVRAANSYFNAV- 287
A L+RA +++ + N E C + ++L + L R + NSY N V
Sbjct: 218 TKAGKLIRAVNIFRHMVTSKNLE-----CRPTIRTYHILFKALLGRGN----NSYINHVY 268
Query: 288 ------------KGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAM-VEDGFTPDCSTFD 334
I +V N ++ G+ V +I M V P+ T+D
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 335 SLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSN 394
L+ GL GR +A ++ + K +V YN++++ F G++D+A+K ++ N
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIEN 388
Query: 395 NCDPDIDTYTKLISAFIKARKVADA---LEMLDE 425
D +Y L+ + K +A LEML E
Sbjct: 389 GRVVDFISYRTLVDESCRKGKYDEATRLLEMLRE 422
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 107/256 (41%), Gaps = 12/256 (4%)
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
A + FT + ++ ++ LG A ++ I + ++ ++ ++YN++I F G
Sbjct: 162 ASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAG 221
Query: 380 DLDEAIKYYRCLLSNN---CDPDIDTYTKLISA--------FIKARKVADALEMLDEMLG 428
L A+ +R ++++ C P I TY L A +I + + +M+
Sbjct: 222 KLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVD 281
Query: 429 QGIVPSTGTVTSFIEP-LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCG 487
GI P + ++ + S A + ++ + C+ + Y L+ L G+
Sbjct: 282 SGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTI 341
Query: 488 MLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLY 547
+ EM+ G+ + + Y ++N G++++AV + E + G + Y L
Sbjct: 342 NARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLV 401
Query: 548 NKLLASNKVERAYKLF 563
++ K + A +L
Sbjct: 402 DESCRKGKYDEATRLL 417
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 293 FNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGR-IEDALK 351
NV N+I++ K G++ K+ + M DG PD T+++LL G + A++
Sbjct: 164 INVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE 223
Query: 352 IFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFI 411
+ L +++ +Y +++ S G +EA + + + P+I Y+ L++++
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 412 KARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLS 471
A E++ EM G+VP+ +T+ ++ G + + AG +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 472 AYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENA 524
Y +L+ LS+ GK +I+++M+ G SD +I+ LC + + A
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 149/352 (42%), Gaps = 8/352 (2%)
Query: 191 IHSYNVILRALGKKKFIDFMLKMLRDLRTEG-ITVNLETLSIVADGLVRAQRVYKAIQIF 249
+ NVILR G ++++ ++ G I+V+ + I V A+ V KA++I+
Sbjct: 98 VQDLNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCI---KFVGAKNVSKALEIY 154
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVK--GKIPFNVATYNTIIAGWSK 307
+ + + N +L CL K + + F+ +K G P +V TYNT++AG K
Sbjct: 155 QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKP-DVVTYNTLLAGCIK 213
Query: 308 IGQ-VCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ + +++ + +G D + ++L GR E+A + + +
Sbjct: 214 VKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIY 273
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
Y+++++++ GD +A + + S P+ T L+ +IK + E+L E+
Sbjct: 274 HYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 427 LGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
G + ++ L G A I+ + G + A +++ L R +
Sbjct: 334 ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRF 393
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
+ + + + D+ + ++ C G++E+ + +M++ + P
Sbjct: 394 KEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSP 445
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 37/265 (13%)
Query: 185 PMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYK 244
P D+ +Y+ +L+A D + + +++ IT N T +IV G R R +
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 245 A-----------------------IQIFGNT-------------EEFGFGCDTESLNVLL 268
+ +FGN FG +T + N+L+
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILI 308
Query: 269 QCLCKRSHVRAANSYFNAVKG-KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFT 327
K+ +S ++ + P+ +TYN II ++ +G M+ + M +G
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368
Query: 328 PDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKY 387
D TF L+ G AG + + + T+ YNA+IS DL E +
Sbjct: 369 ADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERV 428
Query: 388 YRCLLSNNCDPDIDTYTKLISAFIK 412
Y + C D T+ ++ A+ K
Sbjct: 429 YIRMKERQCVCDSRTFEIMVEAYEK 453
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 142/357 (39%), Gaps = 19/357 (5%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQ 247
PK+ +Y +L LGK + K+ ++ EG+ +E + + R+ + A
Sbjct: 122 PKE-GTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 248 IFGNTEEFGFGC--DTESLNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAG 304
I + F C D + + LL+ S +S + + + I N T N +++G
Sbjct: 181 ILDKMKSFP-QCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 305 WSKIGQVCQMKKILEAM-VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
+ ++G+ QM+K+L M V PD T + +L G G+I+ ++
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 364 ETSVYNAMISNFIS---VGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADAL 420
ET +N +I ++ + ++Y R L TY +I AF V DA
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKL---EFPWTTSTYNNIIEAFA---DVGDAK 353
Query: 421 EM---LDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLL 477
M D+M +G+ T T I + G H + + A K + + Y ++
Sbjct: 354 NMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVI 413
Query: 478 MRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHK 534
++ + ++ M+E D +E ++ G + + + +E+ K
Sbjct: 414 SACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEG-MNDKIYYLEQERQK 469
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 310 QVCQMKKILEAMVEDGF-TPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVY 368
Q Q ++ + + E F P T+ LL LG++G+ A K+FD ++E+ +Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 369 NAMISNFISVGDLDEAIKYYRCLLS-NNCDPDIDTYTKLISAFIKARKVADALEMLDEML 427
A+++ + +D+A + S C PD+ TY+ L+ A + A + + EM
Sbjct: 163 TALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMD 222
Query: 428 GQGIVPSTGTVTSFIEPLCSFGP-PHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKC 486
+ I P+T T + G ++ CK + ++L GK
Sbjct: 223 ERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKI 282
Query: 487 GMLLNIWEEMQESGYSSDMEVYEYII 512
M+ + +E+ + G + + +I
Sbjct: 283 DMMESWYEKFRNFGIEPETRTFNILI 308
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 188 PKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITV------NLETLSIVADGLVRAQR 241
P ++ SY ++ L ++ + ++M R + +G+ V N+ ++S +G
Sbjct: 169 PNEV-SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 227
Query: 242 VYK---AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIP-FNVAT 297
+Y QI GFG D N LL+ K + A F ++P NV +
Sbjct: 228 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF----AEMPEVNVVS 283
Query: 298 YNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLV 357
+N +I G+ + + + + L M + GF P+ T S+L R+G +E +IF ++
Sbjct: 284 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 343
Query: 358 EKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKAR 414
+ S +NAM+S + + +EAI +R + N PD T + ++S+ + R
Sbjct: 344 QP----SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 396
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N ++ T+++ S++ + ++ +V+ G+ D +L + G I+ A + F
Sbjct: 484 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 543
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
D ++ K+ T ++N MI + G DEA+ YR ++S+ PD T+ +++A +
Sbjct: 544 DAVLRKN----TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHS 599
Query: 414 RKVADALEMLDEMLG-QGIVP 433
V LE+L M GI P
Sbjct: 600 GLVETGLEILSSMQRIHGIEP 620
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 157/349 (44%), Gaps = 26/349 (7%)
Query: 230 SIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKG 289
SI+A L R+ + ++ +F + G D V++ CL + +G
Sbjct: 301 SIIAS-LARSGDMEESFDMFWEMQNKGMHPD----GVVISCL-----INELGKMMLVPQG 350
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
K F+ N++++ + K + +K+ + E+G + ++++L+G G A + +
Sbjct: 351 K-AFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEG---NKEAWNTMLKGYG-AVLLGKS 405
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
L + +V+ L SV N++I + +GDL A + + C D ++ T+ +I++
Sbjct: 406 LHCY--VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-C----EADTNVITWNAMIAS 458
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
++ + A+ + D M+ + PS+ T+ + + + G MI++ + +++
Sbjct: 459 YVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN 518
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
LS L + + KCG L E+ ++G D + +I+G G +E+A+ + +
Sbjct: 519 LSLSAAL---IDMYAKCGHLEKS-RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 574
Query: 530 ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIKAARSNENARRF 578
+ P+ + L + + VE+ KLFLK+ N + +
Sbjct: 575 QMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY 623
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 7/239 (2%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
NV T+N +IA + Q + + + MV + F P T +LL G +E I
Sbjct: 448 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 507
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
+ E ++ + S+ A+I + G L+++ R L D + +IS +
Sbjct: 508 RYITETEHEMNLSLSAALIDMYAKCGHLEKS----RELFDAGNQKDAVCWNVMISGYGMH 563
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
V A+ + D+M + P+ T + + G ++ + + K +L Y
Sbjct: 564 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY 623
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESL 532
L+ LSR G L + +S D ++ +++ G+ E + + E ++
Sbjct: 624 SCLVDLLSRSGN---LEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV 679
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 20/277 (7%)
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
Q+ G + G ++ N ++ K + A F ++ K N+ +YNT + G
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK---NLVSYNTFLDGTC 450
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ Q K+L + E TF SLL G+ G I +I +V+
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
V NA+IS + G +D A + + + + N + ++T +I+ F K LE ++M
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRN----VISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 427 LGQGIVPSTGTVTSFIEP-----LCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLS 481
+ +G+ P+ T + + L S G H M Y+ + K + Y ++ L
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM-YEDHK---IKPKMEHYACMVDLLC 622
Query: 482 RFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNI 518
R G+L + +E + + +D+ V+ + G C +
Sbjct: 623 R---AGLLTDAFEFINTMPFQADVLVWRTFL-GACRV 655
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 184 QPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVY 243
+ + K++ SYN L + + K+L ++ + V+ T + + G+ +
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
Query: 244 KAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIA 303
K QI + G C+ N L+ K + A+ FN ++ + NV ++ ++I
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR---NVISWTSMIT 548
Query: 304 GWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G++K G ++ + M+E+G P+ T+ ++L G + + + F+++ E D+ +
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE-DHKI 607
Query: 364 ETSV--YNAMISNFISVGDLDEAIKY 387
+ + Y M+ G L +A ++
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEF 633
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 137/323 (42%), Gaps = 21/323 (6%)
Query: 146 SALANTGVDLSLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKK 205
S++++ GV+L +A + GNL W + M +++ S+NV++ K+
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDA-------WYVFGKMSERNLFSWNVLVGGYAKQG 174
Query: 206 FID-FMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESL 264
+ D M R L G+ ++ T V + + ++ + +G+ D + +
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV 234
Query: 265 NVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVED 324
N L+ K V++A F+ + + ++ ++N +I+G+ + G + ++ AM
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRR---DIISWNAMISGYFENGMCHEGLELFFAMRGL 291
Query: 325 GFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEA 384
PD T S++ G I ++ + ++ SV N++ +++ G EA
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 385 IKYYRCLLSNNCDPDIDTYTKLISAF---IKARKVADALEMLDEMLGQGIVPSTGTVTSF 441
K L S DI ++T +IS + K D M+D+ + P TV +
Sbjct: 352 EK----LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ---DSVKPDEITVAAV 404
Query: 442 IEPLCSFGPPHAAMMIYKRARKA 464
+ + G + ++K A KA
Sbjct: 405 LSACATLGDLDTGVELHKLAIKA 427
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 7/163 (4%)
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
+I + G G D N LL + + A S FN+ K +V ++N ++ G+S
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK----DVTSWNILLTGYS 574
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETS 366
+ GQ + ++ + MV+ PD TF SLL G ++ + L F + +
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 367 VYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
Y ++ G+L EA K+ + + PD + L++A
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGALLNA 674
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 8/270 (2%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIF 353
N T++ ++ G+S+ G+ + K+ M G P T +L +E+ ++
Sbjct: 286 NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLH 345
Query: 354 DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKA 413
L++ + A++ + G L +A K + CL + D+ +T LIS +++
Sbjct: 346 SFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ----ERDVALWTSLISGYVQN 401
Query: 414 RKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAY 473
+AL + M GI+P+ T+ S ++ S ++ K G + +
Sbjct: 402 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG 461
Query: 474 KLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
L + + KCG L + + + + D+ + +I+GL + GQ + A+ + EE L
Sbjct: 462 SAL---STMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 534 KGFCPSRLIYSKLYNKLLASNKVERAYKLF 563
+G P + + + + VER + F
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYF 547
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 211 LKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
L + R ++T GI N T++ V + Q+ G+T + GFG + + L
Sbjct: 408 LILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTM 467
Query: 271 LCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
K + N F K +V ++N +I+G S GQ + ++ E M+ +G PD
Sbjct: 468 YSKCGSLEDGNLVFRRTPNK---DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSV--YNAMISNFISVGDLDEAIKYY 388
TF +++ G +E F N++ L+ V Y M+ G L EA ++
Sbjct: 525 VTFVNIISACSHKGFVERGWFYF-NMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF- 582
Query: 389 RCLLSNNCDPDIDTYTKLISA 409
+ S N D + + L+SA
Sbjct: 583 --IESANIDHGLCLWRILLSA 601
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 123/297 (41%), Gaps = 4/297 (1%)
Query: 241 RVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKR--SHVRAANSYFNAVKGKIPFNVATY 298
R+ +AI++F F +LN LL L ++ S A + + +T+
Sbjct: 114 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTF 173
Query: 299 NTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGL--GRAGRIEDALKIFDNL 356
+I +IG+V +++ M +D D + LL + + D + ++L
Sbjct: 174 GILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDL 233
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ + Y ++ + G E + + + +PD+ YT ++ I
Sbjct: 234 RKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 293
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A ++ DE+L G+ P T +I LC A+ + K G + ++ Y +L
Sbjct: 294 PKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNIL 353
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLH 533
+ L + G +W+EM+ +G + + ++ +I+ + ++ A ++EE+ +
Sbjct: 354 IKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 410
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 126/320 (39%), Gaps = 39/320 (12%)
Query: 298 YNTIIAGWSKIGQVCQMKKILEAM-VEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
Y +I +K Q+ + +L + V + F S F ++ G +GRIE+A+++F +
Sbjct: 66 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 125
Query: 357 -----VEKDYVL-------------------------------ETSVYNAMISNFISVGD 380
V Y L E S + +I +G+
Sbjct: 126 PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGE 185
Query: 381 LDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVA--DALEMLDEMLGQGIVPSTGTV 438
+D A + R + ++ D Y++L+S+ K + + D + L+++ P
Sbjct: 186 VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDY 245
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
T + L G + + + + + L Y ++L + +++E+
Sbjct: 246 TVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLL 305
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
G + D+ Y INGLC +E A+ +M G P+ + Y+ L L+ + + R
Sbjct: 306 LGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSR 365
Query: 559 AYKLFLKIKAARSNENARRF 578
A L+ +++ N N+ F
Sbjct: 366 AKTLWKEMETNGVNRNSHTF 385
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 149/371 (40%), Gaps = 62/371 (16%)
Query: 248 IFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANS---YFNAVKGKIPFNVATYNTIIAG 304
+F NT F C N ++ + + + S YF +P NV +YN II
Sbjct: 172 VFSNTRPTVFTC-----NAIIAAMYRAKRYSESISLFQYFFKQSNIVP-NVVSYNQIINA 225
Query: 305 WSKIGQVCQMKKILEAMVEDG-FTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVL 363
G V + ++ ++ + F P T+ L +GL +AGRI DA + ++ K
Sbjct: 226 HCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAA 285
Query: 364 ETSVYNAMISNFISVGDLDEAIKY-----------------------------------Y 388
+++VYN +I ++ +GD D+A+++ Y
Sbjct: 286 DSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESY 345
Query: 389 RCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVP-----STGTVTSFIE 443
R LL T L+ F+K K +A + +EML P ++ TV +
Sbjct: 346 RSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVN 405
Query: 444 PLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMR----LSRFGKCGMLLNIWEEMQES 499
G A+ +K K G K++ + + + ++RF + GML E
Sbjct: 406 ECFKMGEFSEAINTFK---KVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEA-ERFFAE 461
Query: 500 GYS----SDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNK 555
G S +D + +I+ ++++AV +++ + ++++ +L+ + K
Sbjct: 462 GVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGK 521
Query: 556 VERAYKLFLKI 566
+ + ++ K+
Sbjct: 522 LTESAEVLTKM 532
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 168/437 (38%), Gaps = 83/437 (18%)
Query: 141 KSAIESALANTGVDL-SLDVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILR 199
K A +S +NT + + + + +YR E++ +F + KQ I ++ SYN I+
Sbjct: 166 KLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLF-QYFFKQSNIVPNVVSYNQIIN 224
Query: 200 ALGKKKFIDFMLKMLRD-LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFG 258
A + +D L++ R L + T + GLV+A R+ A + G
Sbjct: 225 AHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQA 284
Query: 259 CDTESLNVL-------------------LQCLC-----------------KRSHVRAANS 282
D+ N L L+ C K + A S
Sbjct: 285 ADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMES 344
Query: 283 YFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLG- 341
Y + + K + T N ++ + K G+ + + M+++ P+ + +S G+
Sbjct: 345 YRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMV 404
Query: 342 ----RAGRIEDALKIF----DNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLS 393
+ G +A+ F + K +V++ Y +++ F G L EA +++ +S
Sbjct: 405 NECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVS 464
Query: 394 NNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHA 453
+ D ++ +I A++KA ++ DA++MLD M V + + FG
Sbjct: 465 RSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM-----------VDVNLRVVADFG---- 509
Query: 454 AMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIIN 513
AR G L + GK + +M E D +Y+ ++
Sbjct: 510 -------ARVFG-------------ELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVR 549
Query: 514 GLCNIGQLENAVLVMEE 530
GLC+ L+ A ++ E
Sbjct: 550 GLCDGDALDQAKDIVGE 566
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 24/277 (8%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
TY ++ + ++GQ +++ ++++G D +++L G + +A +IF +
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ D V +N+MI F G +D+A + + N ++ +IS F++ +
Sbjct: 188 IGFDVV----AWNSMIMGFAKCGLIDQAQNLFDEMPQRNG----VSWNSMISGFVRNGRF 239
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYK---RARKAGCKISLSAY 473
DAL+M EM + + P T+ S + G I++ R R I ++A
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 474 KLLLMRLSRFGKCGML---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEE 530
+ + KCG + LN++ E + + +I GL N G E A+ + E
Sbjct: 300 ------IDMYCKCGCIEEGLNVF----ECAPKKQLSCWNSMILGLANNGFEERAMDLFSE 349
Query: 531 SLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
G P + + + S +V RA + F +K
Sbjct: 350 LERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/375 (18%), Positives = 144/375 (38%), Gaps = 29/375 (7%)
Query: 158 DVVAKTLYRGNLGGEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDL 217
+ + + R + A+ IF + P + +Y + +A G+ L RD
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR-------LGQARDG 145
Query: 218 RT-EGITV--NLETLSIVADGL----VRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQC 270
R G+ + LE S + + + V + +A +IF G D + N ++
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMG 201
Query: 271 LCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDC 330
K + A + F+ + + N ++N++I+G+ + G+ + M E PD
Sbjct: 202 FAKCGLIDQAQNLFDEMPQR---NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 331 STFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRC 390
T SLL G E I + +V + L + V A+I + G ++E + + C
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 391 LLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGP 450
+ + +I A+++ E+ G+ P + + + G
Sbjct: 319 APKKQ----LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 451 PHAAMMIYKRAR-KAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYE 509
H A ++ + K + S+ Y L++ L G G+L ++ D ++
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVL---GGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 510 YIINGLCNIGQLENA 524
+++ IG +E A
Sbjct: 432 SLLSACRKIGNVEMA 446
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 264 LNVLLQCLCKRSHVRAANSYFNAVKGK-IPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
N +++C + S+F+++K + I + TY ++ S + + K + ++
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 323 EDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLD 382
GF +++ GR+ DA K+FD + E++ V V+N MI F GD++
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVV----VWNLMIRGFCDSGDVE 185
Query: 383 EAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFI 442
+ ++ + + I ++ +IS+ K + +ALE+ EM+ QG P TV + +
Sbjct: 186 RGLHLFKQM----SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 443 EPLCSFGPPHAAMMIYKRARKAG 465
S G I+ A +G
Sbjct: 242 PISASLGVLDTGKWIHSTAESSG 264
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 314 MKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMIS 373
+++I M +GFT + + L + GR +AL++F + +K+ + + + A++
Sbjct: 184 LQEIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 374 NFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV-ADALEMLDEMLGQGIV 432
+ + G E +K + +L++ P+ TY+ LI K DA + L EM+G G+
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS 300
Query: 433 PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAG 465
P+ T T+ E G +A + + + G
Sbjct: 301 PNAATYTAVFEAFVREGKEESARELLQEMKGKG 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 42/200 (21%)
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK--IPFNVATYNTIIAG 304
+IF GF T + L K A F+ +K K +P +V + I+
Sbjct: 186 EIFHKMRTEGF---TNEAVKMFDALSKDGRTHEALELFSQIKDKNRMP-DVVAHTAIVEA 241
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRI-EDALKIFDNLVEKDYVL 363
++ GQ + K+ M+ G +P+ T+ L++GL G+ +DA K Y+L
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDA---------KKYLL 292
Query: 364 ETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEML 423
E ++ N P+ TYT + AF++ K A E+L
Sbjct: 293 E--------------------------MMGNGMSPNAATYTAVFEAFVREGKEESARELL 326
Query: 424 DEMLGQGIVPSTGTVTSFIE 443
EM G+G VP V +E
Sbjct: 327 QEMKGKGFVPDEKAVREALE 346
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 119/310 (38%), Gaps = 47/310 (15%)
Query: 294 NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPD----------CSTFDSLLQG---- 339
++ ++N +I G+ KIG+ + + + M +G PD CS L +G
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 340 ---------------------LGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISV 378
+ G I +A +IFDNL ++ V + MIS +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGYARC 336
Query: 379 GDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTV 438
G LD + R L + + D+ + +I ++A++ DAL + EM P T+
Sbjct: 337 GLLDVS----RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 439 TSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQE 498
+ G + I++ K ++++ L+ ++ G L+++ +Q
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ- 451
Query: 499 SGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLYNKLLASNKVER 558
+ + Y II GL G A+ E + G P + + L + ++
Sbjct: 452 ---TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 559 AYKLFLKIKA 568
F ++K+
Sbjct: 509 GRDYFSQMKS 518
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
G IP + N II ++K +V + ++ + M G P+ T+ L++G+ GR+
Sbjct: 218 GVIP-DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
L + + K V S Y +I + LDEA++ +L+N+ PD+ TY +++
Sbjct: 277 GLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLT 336
Query: 409 AFIKARKVADALEMLDE 425
+ + ++ALEM++E
Sbjct: 337 ELCRGGRGSEALEMVEE 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 206 FIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLN 265
++ + + + +++ G+ + L+++ + V +AI++F +G + + +
Sbjct: 203 YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYS 262
Query: 266 VLLQCLCKRSHVRAANSYFN--AVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVE 323
L++ +C++ V ++ VKG +P N + Y +I S ++ + +++ M+
Sbjct: 263 YLVKGVCEKGRVGQGLGFYKEMQVKGMVP-NGSCYMVLICSLSMERRLDEAVEVVYDMLA 321
Query: 324 DGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMI 372
+ +PD T++++L L R GR +AL++ + ++D V+ Y ++
Sbjct: 322 NSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 236 LVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNV 295
L+ A R+ + QI + + D LL K +H+ A F ++ + NV
Sbjct: 251 LLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM---VVRNV 307
Query: 296 ATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDN 355
++N +I G+++ G+ + ++ M+ + PD TF S+L + I + ++
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAM 367
Query: 356 LVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARK 415
+ +K SV N++IS++ G+L EA+ + + +PD+ ++T +I A
Sbjct: 368 VTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR----EPDLVSWTSVIGALASHGF 423
Query: 416 VADALEMLDEMLGQGIVPSTGTVTSFIEPL--CSFG 449
++L+M + ML Q + P T F+E L CS G
Sbjct: 424 AEESLQMFESML-QKLQPDKIT---FLEVLSACSHG 455
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 154/348 (44%), Gaps = 34/348 (9%)
Query: 225 NLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYF 284
N+ T + + G V+ +R+ +A +F + + S V+L LC A F
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELF 161
Query: 285 NAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAG 344
+ + + NV ++NT++ G + G + + K++ +AM + D +++++++G
Sbjct: 162 DEMPER---NVVSWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIKGYIEND 214
Query: 345 RIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYT 404
+E+A +F ++ EK+ V TS M+ + GD+ EA YR L + +I ++T
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTS----MVYGYCRYGDVREA---YR-LFCEMPERNIVSWT 266
Query: 405 KLISAFIKARKVADALEMLDEMLG--QGIVPSTGTVTSFIEPLCSFGPPHAAM--MIYKR 460
+IS F +AL + EM + P+ T+ S G + ++ +
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ 326
Query: 461 ARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQ 520
G + +L + + G++ + + E S D++ IIN G
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE---SFDLQSCNIIINRYLKNGD 383
Query: 521 LENAVLVME--ESLHKGFCPSRLIYSKLYNKLLASNKVERAYKLFLKI 566
LE A + E +SLH ++ ++ + + L + V RA+ LF K+
Sbjct: 384 LERAETLFERVKSLH-----DKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 22/293 (7%)
Query: 260 DTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILE 319
D +S N+++ K + A + F VK + ++ ++I G+ + G V + + +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSL--HDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 320 AMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVG 379
+ + D T+ ++ GL + +A + ++V S Y+ ++S+ +
Sbjct: 425 KLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 380 DLDEAIKYYRCLLSNNC---DPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPSTG 436
+LD+ K+ C+++ DPD+ L+S + K + DA E+ +M+ + V
Sbjct: 481 NLDQG-KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV---- 535
Query: 437 TVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEM 496
+ S I L G A+ ++K +G K + + +L S G L +++ M
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Query: 497 QESGYSSDMEVYEYI--INGLCNIGQLENAVLVMEESLHK-GFCPSRLIYSKL 546
+E+ YS + YI I+ L G+L+ A EE + F P +Y L
Sbjct: 596 KET-YSIQPGIDHYISMIDLLGRAGKLKEA----EEFISALPFTPDHTVYGAL 643
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 234 DGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRS-HVRAANSYFNAVK-GKI 291
DG + A V +A +F + D + V++ L + AA+ + V+ G
Sbjct: 408 DGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 292 PFNVATYNTIIAGWSKIGQVCQMKKI--LEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
P N +TY+ +++ + Q K I + A + PD +SL+ + G IEDA
Sbjct: 464 PLN-STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+IF +V+KD T +N+MI G D+A+ ++ +L + P+ T+ ++SA
Sbjct: 523 YEIFAKMVQKD----TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 410 FIKARKVADALEMLDEM 426
+ + LE+ M
Sbjct: 579 CSHSGLITRGLELFKAM 595
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 139/343 (40%), Gaps = 17/343 (4%)
Query: 242 VYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTI 301
+ K + I T + G D LL K ++ A F+ + K NV TYN +
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK---NVVTYNAM 324
Query: 302 IAGWSKIGQVC-----QMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
I+G+ ++ ++ + K+ M G P STF +L+ A +E +I +
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+ ++ + + +A+I + +G ++ ++ C S + DI ++T +I ++ ++
Sbjct: 385 CKNNFQSDEFIGSALIELYALMGSTEDGMQ---CFASTS-KQDIASWTSMIDCHVQNEQL 440
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
A ++ ++ I P TV+ + F + I A K+G S
Sbjct: 441 ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSS 500
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ ++ G + ++ E+Q + D+ Y +I+ L G A+ + E G
Sbjct: 501 ISMYAKSGNMPLANQVFIEVQ----NPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIK-AARSNENARRF 578
P++ + + V + K F +K R N N + F
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
>AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
+I + M E G P+ ++L GL + G +++A+K+F + +K + E +Y A++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
+++A + +R + +N P+ +Y L+ + DA+ EML G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
T ++ LC A + G +++ A K + + + F
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
G IP VA ++ G K G V + K+ M + G P+ + ++++ +A +IED
Sbjct: 129 GLIPNAVA----MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIED 184
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
A +IF + Y ++ + LD+A+ + +L + P++ T+ +L+
Sbjct: 185 AKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVD 244
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
A + + V A +D + +G + V F++ F P A I+K+
Sbjct: 245 ALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF-PSLAWEAIFKK 295
>AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 316 KILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNF 375
+I + M E G P+ ++L GL + G +++A+K+F + +K + E +Y A++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 376 ISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQGIVPST 435
+++A + +R + +N P+ +Y L+ + DA+ EML G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 436 GTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRF 483
T ++ LC A + G +++ A K + + + F
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 289 GKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIED 348
G IP VA ++ G K G V + K+ M + G P+ + ++++ +A +IED
Sbjct: 129 GLIPNAVA----MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIED 184
Query: 349 ALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLIS 408
A +IF + Y ++ + LD+A+ + +L + P++ T+ +L+
Sbjct: 185 AKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVD 244
Query: 409 AFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKR 460
A + + V A +D + +G + V F++ F P A I+K+
Sbjct: 245 ALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPF-PSLAWEAIFKK 295
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN-LETLSIVADGLVRAQRVYK 244
M +D+ ++N ++ + + D L + +R EG++ N + +S+++ L+ + +
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 245 AIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAG 304
+ GF D N L+ K + ++ FN + + N+ T+N ++A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR---NIITWNAMLAA 539
Query: 305 WSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLE 364
+ G ++ K++ M G + D +F L + +E+ ++ V+ + +
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 365 TSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLD 424
+ ++NA + G++ E +K +L + + + ++ LISA + +
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVK----MLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 425 EMLGQGIVPSTGTVTSFIEPLCSFG 449
EML GI P T S + CS G
Sbjct: 656 EMLEMGIKPGHVTFVSLLTA-CSHG 679
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 153/376 (40%), Gaps = 44/376 (11%)
Query: 167 GNLG-GEAMVIFFNWAIKQPMIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVN 225
G LG +AM +F + M +D S+N +L L K L+ R L E +
Sbjct: 166 GGLGVRDAMKLF------EKMSERDTVSWNSMLGGLVKAG----ELRDARRLFDEMPQRD 215
Query: 226 LETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFN 285
L + + + DG R + + KA ++F E +T S + ++ K + A F+
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 286 AVKGKIPF---NVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGR 342
K+P NV T+ IIAG+++ G + + ++++ MV G D + S+L
Sbjct: 272 ----KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 343 AGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDT 402
+G + ++I L + V NA++ + G+L +A + + D+ +
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVS 383
Query: 403 YTKLISAFIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMM------ 456
+ ++ +A+E+ M +GI P T FI LCS HA ++
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT---FIAVLCSCN--HAGLIDEGIDY 438
Query: 457 IYKRARKAGCKISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLC 516
Y + + Y L+ L R G+ + + + M ME I L
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP-------MEPNVVIWGALL 491
Query: 517 NIGQLENAVLVMEESL 532
++ N V + +E L
Sbjct: 492 GACRMHNEVDIAKEVL 507
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Query: 217 LRTEGITVNLETLSIVADGLVRAQRVYKAIQIFGNTEEFGFGCDT-ESLNVLLQCLCKRS 275
++ + ++ +T ++ L R ++ A F E G T SL V++ LC
Sbjct: 165 MKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNG 224
Query: 276 HVRAANSYFNA---VKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCST 332
+ A VKG + N+ T+ ++I K ++ +L+ M ++ D +
Sbjct: 225 EITRARELVEEMGLVKG-VKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDS 283
Query: 333 FDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLL 392
+ L+ G G++E+A ++ + +K +E+ +YN +++ + G +++ I+ Y +
Sbjct: 284 YKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMS 343
Query: 393 SNNCDPDIDTYTKLISAFIKARKVADALEMLDEM 426
S P+ DTY L++ KA KV +A+ L+E+
Sbjct: 344 SRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/377 (17%), Positives = 145/377 (38%), Gaps = 17/377 (4%)
Query: 190 DIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKAIQIF 249
+I YN ++ L + +R G+ ++ T +V RA I +
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 250 GNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIG 309
+ GF D ++ LL + A+ F+ + + +V T+ + +G++ G
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR---SVVTWTALFSGYTTSG 191
Query: 310 QVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLETSVYN 369
+ + + + MVE G PD +L G ++ I + E + + V
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 370 AMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDEMLGQ 429
+++ + G +++A R + + + DI T++ +I + + +E+ +ML +
Sbjct: 252 TLVNLYAKCGKMEKA----RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 430 GIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLMRLSRFGKCGML 489
+ P ++ F+ S G + +L L + + KCG +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL---IDMYAKCGAM 364
Query: 490 ---LNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKL 546
+++EM+E D+ + I+GL G ++ + V ++ G P + L
Sbjct: 365 ARGFEVFKEMKE----KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 547 YNKLLASNKVERAYKLF 563
+ + ++ + F
Sbjct: 421 LCGCVHAGLIQDGLRFF 437
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 9/271 (3%)
Query: 297 TYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNL 356
T ++++ + + ++C K+I +V GF ++L+ R G +E A ++ +
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
KD +E + A++ +I +GD+++A + L D D+ +T +I + +
Sbjct: 341 GTKDLKIEG--FTALLDGYIKLGDMNQAKNIFVSLK----DRDVVAWTAMIVGYEQHGSY 394
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+A+ + M+G G P++ T+ + + S I+ A K+G S+S L
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
++ + K G + + D + +I L G E A+ + E L +G
Sbjct: 455 ---ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLFLKIK 567
P + Y +++ + V + + F +K
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 122/300 (40%), Gaps = 53/300 (17%)
Query: 263 SLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWSKIGQVCQMKKILEAMV 322
S N +L KR + + +F+ + + + ++ T+I G+ IGQ + +++ MV
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQR---DSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 323 EDGFTP-----------------------------------DCSTFDSLLQGLGRAGRIE 347
++G P + S +SLL + G
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 348 DALKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLI 407
A +FD +V +D S +NAMI+ + VG +D A+ + + + DI T+ +I
Sbjct: 199 MAKFVFDRMVVRD----ISSWNAMIALHMQVGQMDLAMAQFEQM----AERDIVTWNSMI 250
Query: 408 SAFIKARKVADALEMLDEMLGQGIV-PSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGC 466
S F + AL++ +ML ++ P T+ S + + I+ G
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 310
Query: 467 KISLSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEV--YEYIINGLCNIGQLENA 524
IS L +S + +CG + +++ G + D+++ + +++G +G + A
Sbjct: 311 DISGIVLNAL---ISMYSRCGGVETARRLIEQRG-TKDLKIEGFTALLDGYIKLGDMNQA 366
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 247 QIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGWS 306
QI G+ + G N L+ K ++ +A+ F+ ++ + ++ ++I +
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR--CERDTVSWTSMIIALA 491
Query: 307 KIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET- 365
+ G + ++ E M+ +G PD T+ + AG + + FD + + D ++ T
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL 551
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
S Y M+ F G L EA ++ + +PD+ T+ L+SA
Sbjct: 552 SHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSA 592
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 152/387 (39%), Gaps = 24/387 (6%)
Query: 185 PMIPKDIHSYNVILRALGKKKFIDF--MLKMLRDLRTEGITVNLETLSIVADGLVRAQRV 242
P ++ HS+N IL K K + +L + +R V+ L V +
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 243 YKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPF-NVATYNTI 301
I I G + G D L++ + + +A F+ +IP N + +
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD----EIPVRNSVLWGVL 181
Query: 302 IAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLG-----RAGRIEDALKIFDNL 356
+ G+ K + ++ ++ M + G D T L++ G + G+ + I +
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 357 VEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKV 416
+++ L+ S+ I ++ LD A R L + D ++ +T LIS F K +
Sbjct: 242 IDQSDYLQASI----IDMYVKCRLLDNA----RKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 417 ADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLL 476
+A ++ +ML + I+P+ T+ + + S G ++ + G ++ +
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 477 LMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGF 536
+ +R G M +++ M E S + +IN G E A+ + +
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVIS----WSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 537 CPSRLIYSKLYNKLLASNKVERAYKLF 563
P+ + + L + S V+ +K F
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQF 436
>AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16811051-16812106 FORWARD
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 231 IVADGLVRAQRVYKAIQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGK 290
I+ L + R+ A+ + G+ G + + +L L ++ + A +++ K
Sbjct: 112 ILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSK 171
Query: 291 -IPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
+ +V YN + G++ +++ + EDG +PD ++D+L+ G RAG++E A
Sbjct: 172 SVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAA 231
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
+ I + E + S + +I+ + G +++ + D +++ L
Sbjct: 232 MAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGK 291
Query: 410 FIKARKVADALEMLDEMLGQGI 431
+K ++ +A+ ++ EM+ +G+
Sbjct: 292 LVKRKRYEEAMIVVKEMVMRGL 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 290 KIPFNVATYNTIIAGWSKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDA 349
K N A+Y++ + ++++L ++ GF+ + +D L+ L + GRI+DA
Sbjct: 78 KFLTNTASYSSYLE---------DLRRVL-PQIDGGFSRK-NAYDILISRLCKLGRIDDA 126
Query: 350 LKIFDNLVEKDYVLETSVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISA 409
L + ++ L S Y+ ++ + ++EA + + S + D+ Y +++
Sbjct: 127 LIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTS 186
Query: 410 FIKARKVADALEMLDEMLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKIS 469
++ A E++ ++ G P + + + + C G AAM I +R + G +
Sbjct: 187 HCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVL 246
Query: 470 LSAYKLLLMRLSRFGKCGMLLNIWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVME 529
S + ++ L G + L D E + ++ L + E A++V++
Sbjct: 247 YSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVK 306
Query: 530 ESLHKGF 536
E + +G
Sbjct: 307 EMVMRGL 313
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 165/390 (42%), Gaps = 26/390 (6%)
Query: 186 MIPKDIHSYNVILRALGKKKFIDFMLKMLRDLRTEGITVNLETLSIVADGLVRAQRVYKA 245
M +D SYN ++ K + ++ ++M + + +L T+S V + + A
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 246 IQIFGNTEEFGFGCDTESLNVLLQCLCKRSHVRAANSYFNAVKGKIPFNVATYNTIIAGW 305
I+ + GF ++ N+L+ K + A FN+++ K + ++N+II+G+
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK---DTVSWNSIISGY 383
Query: 306 SKIGQVCQMKKILEAMVEDGFTPDCSTFDSLLQGLGRAGRIEDALKIFDNLVEKDYVLET 365
+ G + + K+ + M+ D T+ L+ R ++ + N ++ ++
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 366 SVYNAMISNFISVGDLDEAIKYYRCLLSNNCDPDIDTYTKLISAFIKARKVADALEMLDE 425
SV NA+I + G++ +++K + S+ D T+ +ISA ++ A L++ +
Sbjct: 444 SVSNALIDMYAKCGEVGDSLK----IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 426 MLGQGIVPSTGTVTSFIEPLCSFGPPHAAMMIYKRARKAGCKISLSAYKLLLM----RLS 481
M +VP T + P+C A++ + ++ C + Y+ L +
Sbjct: 500 MRKSEVVPDMATFLVTL-PMC------ASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 482 RFGKCGMLLN---IWEEMQESGYSSDMEVYEYIINGLCNIGQLENAVLVMEESLHKGFCP 538
+ KCG L N ++E M D+ + +I G+ E A+ + G P
Sbjct: 553 MYSKCGCLENSSRVFERMSR----RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 539 SRLIYSKLYNKLLASNKVERAYKLFLKIKA 568
+++ + S V+ F K+K
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKT 638