Jatropha Genome Database

JcCB0028241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0028241.10 + phase: 0 
         (250 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13280.1 | Symbols: AOC4 | AOC4 (ALLENE OXIDE CYCLASE 4); all...   246   9e-66
AT3G25780.1 | Symbols: AOC3 | AOC3 (ALLENE OXIDE CYCLASE 3); all...   241   5e-64
AT3G25760.1 | Symbols: AOC1, ERD12 | AOC1 (ALLENE OXIDE CYCLASE ...   231   4e-61
AT3G25770.1 | Symbols: AOC2 | AOC2 (ALLENE OXIDE CYCLASE 2); all...   228   2e-60

>AT1G13280.1 | Symbols: AOC4 | AOC4 (ALLENE OXIDE CYCLASE 4);
           allene-oxide cyclase | chr1:4547624-4548552 FORWARD
          Length = 254

 Score =  246 bits (628), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 119/187 (63%), Positives = 143/187 (76%), Gaps = 2/187 (1%)

Query: 66  CKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQK-EVNSLGDLVPFSNKLYTGDLQ 124
           C S ++D S P+K QEL+VYE NE DR SPA L+L +K +   LGDLVPF+NKLYTGDL 
Sbjct: 68  CSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLT 127

Query: 125 KRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGGTGI 184
           KRIGITAG+C+LI+H  EKKGDR+EA YSFYFGDYGHI+VQG YLTYED++LA+TGG+G+
Sbjct: 128 KRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGV 187

Query: 185 FEGVSGQVKLRQLIFPFKLFYTFYLKGI-KDLPEELVGKXXXXXXXXXXXXXXKACQPHA 243
           FEG  GQVKLRQL++P KLFYTFYLKG+  DLP EL GK              +A QP A
Sbjct: 188 FEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGA 247

Query: 244 ALVNFTD 250
            + NFT+
Sbjct: 248 TIANFTN 254


>AT3G25780.1 | Symbols: AOC3 | AOC3 (ALLENE OXIDE CYCLASE 3);
           allene-oxide cyclase | chr3:9409362-9410409 FORWARD
          Length = 258

 Score =  241 bits (614), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 144/196 (73%), Gaps = 2/196 (1%)

Query: 57  FSVPKRSFSCKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVN-SLGDLVPFS 115
            +V +  F    + +++S PSK QEL+VYE+NE DR SPA L+L +K     LGDLVPF+
Sbjct: 63  LNVTRAFFWNWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFT 122

Query: 116 NKLYTGDLQKRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSY 175
           NKLYTGDL+KR+GITAG+C+LI+H  EK GDR+EA YSFYFGDYGH++VQG YLTYED++
Sbjct: 123 NKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTF 182

Query: 176 LAVTGGTGIFEGVSGQVKLRQLIFPFKLFYTFYLKGI-KDLPEELVGKXXXXXXXXXXXX 234
           LAVTGG+GIFEG  GQVKLRQL++P KLFYTFYLKG+  DLP EL G             
Sbjct: 183 LAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAP 242

Query: 235 XXKACQPHAALVNFTD 250
             KA +P   + NFT+
Sbjct: 243 EAKAMEPSGVISNFTN 258


>AT3G25760.1 | Symbols: AOC1, ERD12 | AOC1 (ALLENE OXIDE CYCLASE 1);
           allene-oxide cyclase | chr3:9403972-9405105 FORWARD
          Length = 254

 Score =  231 bits (588), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 138/192 (71%), Gaps = 1/192 (0%)

Query: 60  PKRSFSCKSQASDDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLY 119
           P R+ S     +++  PSK QEL VYEIN+ DR SP  L+ +      LGDLVPF+NKLY
Sbjct: 63  PTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLY 122

Query: 120 TGDLQKRIGITAGICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVT 179
           TGDL+KR+GITAG+C++IEH  EK GDR+EA YSFYFGDYGH++VQG YLTYEDS+LA+T
Sbjct: 123 TGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAIT 182

Query: 180 GGTGIFEGVSGQVKLRQLIFPFKLFYTFYLKGI-KDLPEELVGKXXXXXXXXXXXXXXKA 238
           GG GIFEG  GQVKL+QL++P KLFYTFYLKG+  DLP EL+G               KA
Sbjct: 183 GGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKA 242

Query: 239 CQPHAALVNFTD 250
            +P   + NFT+
Sbjct: 243 LKPSGVVSNFTN 254


>AT3G25770.1 | Symbols: AOC2 | AOC2 (ALLENE OXIDE CYCLASE 2);
           allene-oxide cyclase | chr3:9406975-9407839 FORWARD
          Length = 253

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/180 (60%), Positives = 134/180 (74%), Gaps = 1/180 (0%)

Query: 72  DDSTPSKFQELHVYEINERDRGSPAYLRLSQKEVNSLGDLVPFSNKLYTGDLQKRIGITA 131
           ++  PSK QEL VYEINE DR SP  L+ +   +  LGDLVPF+NKLYTGDL+KR+GITA
Sbjct: 74  ENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITA 133

Query: 132 GICILIEHKAEKKGDRYEAIYSFYFGDYGHIAVQGAYLTYEDSYLAVTGGTGIFEGVSGQ 191
           G+C++IEH  EKKG+R+EA YSFYFGDYGH++VQG YLTYEDS+LA+TGG GIFEG  GQ
Sbjct: 134 GLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQ 193

Query: 192 VKLRQLIFPFKLFYTFYLKGI-KDLPEELVGKXXXXXXXXXXXXXXKACQPHAALVNFTD 250
           VKL+QL++P KLFYTFYLKG+  DLP EL G               KA +P   + N+T+
Sbjct: 194 VKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253