Jatropha Genome Database

JcCB0027191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.20 - phase: 0 /short
         (43 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13270.1 | Symbols: MAP1C, MAP1B | MAP1C (METHIONINE AMINOPEP...    84   2e-17
AT3G25740.1 | Symbols: MAP1B, MAP1C | MAP1B (METHIONINE AMINOPEP...    74   2e-14
AT4G37040.1 | Symbols: MAP1D | MAP1D (METHIONINE AMINOPEPTIDASE ...    62   8e-11
AT2G45240.1 | Symbols: MAP1A | MAP1A (METHIONINE AMINOPEPTIDASE ...    57   3e-09

>AT1G13270.1 | Symbols: MAP1C, MAP1B | MAP1C (METHIONINE
           AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase
           | chr1:4544999-4547155 FORWARD
          Length = 369

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK 42
           +G+TEC+TWPDNWTTLTADG  AAQFEHTILITRTG+EILTK
Sbjct: 327 IGTTECVTWPDNWTTLTADGGVAAQFEHTILITRTGSEILTK 368


>AT3G25740.1 | Symbols: MAP1B, MAP1C | MAP1B (METHIONINE
           AMINOPEPTIDASE 1C); aminopeptidase/ metalloexopeptidase
           | chr3:9397806-9399653 FORWARD
          Length = 344

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/43 (76%), Positives = 37/43 (86%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTKS 43
           +G+TE +TWPD WT +TADG PAAQFEHTILIT TGAEILT S
Sbjct: 301 IGTTEFVTWPDKWTIVTADGGPAAQFEHTILITTTGAEILTIS 343


>AT4G37040.1 | Symbols: MAP1D | MAP1D (METHIONINE AMINOPEPTIDASE
           1D); aminopeptidase/ metalloexopeptidase |
           chr4:17455175-17457085 FORWARD
          Length = 350

 Score = 62.0 bits (149), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 1   MGSTECLTWPDNWTTLTADGSPAAQFEHTILITRTGAEILTK 42
           +GS   + W DNWT +T D S +AQFEHTILIT+ GAEILTK
Sbjct: 308 IGSRNPIMWDDNWTVVTEDASLSAQFEHTILITKDGAEILTK 349


>AT2G45240.1 | Symbols: MAP1A | MAP1A (METHIONINE AMINOPEPTIDASE
           1A); aminopeptidase/ metalloexopeptidase |
           chr2:18656059-18658906 FORWARD
          Length = 398

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/34 (67%), Positives = 28/34 (82%)

Query: 8   TWPDNWTTLTADGSPAAQFEHTILITRTGAEILT 41
           TWPD WT +TADG  +AQFEHT+L+T TG E+LT
Sbjct: 350 TWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLT 383