Jatropha Genome Database

JcCB0027191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0027191.10 - phase: 0 
         (258 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13280.1 | Symbols: AOC4 | AOC4 (ALLENE OXIDE CYCLASE 4); all...   263   8e-71
AT3G25780.1 | Symbols: AOC3 | AOC3 (ALLENE OXIDE CYCLASE 3); all...   262   2e-70
AT3G25770.1 | Symbols: AOC2 | AOC2 (ALLENE OXIDE CYCLASE 2); all...   236   1e-62
AT3G25760.1 | Symbols: AOC1, ERD12 | AOC1 (ALLENE OXIDE CYCLASE ...   236   1e-62

>AT1G13280.1 | Symbols: AOC4 | AOC4 (ALLENE OXIDE CYCLASE 4);
           allene-oxide cyclase | chr1:4547624-4548552 FORWARD
          Length = 254

 Score =  263 bits (672), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 153/208 (73%), Gaps = 6/208 (2%)

Query: 55  FSTRRCSPKSIVTTAFFSKLCSESPK--RKPAGKVQQLNVYEINERDRDSPAILKLSKKP 112
            STR  S  S  T  FF  +CS S     +P  K+Q+LNVYE NE DR+SPA+LKL KKP
Sbjct: 49  LSTRARSTTS-STGGFFRTICSSSSNDYSRPT-KIQELNVYEFNEGDRNSPAVLKLGKKP 106

Query: 113 E-LALGDLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHIS 171
           + L LGDLVPFTNKLY+GDL KR GITAGLCVLIQHVPEK GDR+EA+YSFYFGDYGHIS
Sbjct: 107 DQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHIS 166

Query: 172 VQGAYLTYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGI-PDLPAELLGX 230
           VQG YLTY+DTFLA+TGGSG+FEG YGQVKL+Q+V+P KLFYTFYLKG+  DLP EL G 
Sbjct: 167 VQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGK 226

Query: 231 XXXXXXXXXXXXXXXXXQPNATILNFTQ 258
                            QP ATI NFT 
Sbjct: 227 HVEPSKEVKPAAEAQATQPGATIANFTN 254


>AT3G25780.1 | Symbols: AOC3 | AOC3 (ALLENE OXIDE CYCLASE 3);
           allene-oxide cyclase | chr3:9409362-9410409 FORWARD
          Length = 258

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/195 (66%), Positives = 151/195 (77%), Gaps = 3/195 (1%)

Query: 66  VTTAFFSKLCSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKP-ELALGDLVPFTN 124
           VT AFF     ++   +P+ K+Q+LNVYE+NE DR+SPA+LKL KKP EL LGDLVPFTN
Sbjct: 65  VTRAFFWNWGKKTENSRPS-KIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTN 123

Query: 125 KLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYLTYQDTFL 184
           KLY+GDL+KR GITAGLCVLIQHVPEK+GDR+EA+YSFYFGDYGH+SVQG YLTY+DTFL
Sbjct: 124 KLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFL 183

Query: 185 AVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIP-DLPAELLGXXXXXXXXXXXXXX 243
           AVTGGSGIFEG YGQVKL+Q+V+P KLFYTFYLKG+  DLP EL G              
Sbjct: 184 AVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPE 243

Query: 244 XXXXQPNATILNFTQ 258
               +P+  I NFT 
Sbjct: 244 AKAMEPSGVISNFTN 258


>AT3G25770.1 | Symbols: AOC2 | AOC2 (ALLENE OXIDE CYCLASE 2);
           allene-oxide cyclase | chr3:9406975-9407839 FORWARD
          Length = 253

 Score =  236 bits (602), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/222 (54%), Positives = 150/222 (67%), Gaps = 7/222 (3%)

Query: 38  QNQSLSTQNFKFSIPQHFSTRRCSPKSIVTTAFFSKLCSESPKRKPAGKVQQLNVYEINE 97
           QN  +S+    FS P  F+ ++       + A       E+P+     KVQ+L+VYEINE
Sbjct: 38  QNLGISSNGSDFSYPSSFTAKK---NLTASRALSQNGNIENPR---PSKVQELSVYEINE 91

Query: 98  RDRDSPAILKLSKKPELALGDLVPFTNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYE 157
            DR SP ILK +      LGDLVPFTNKLY+GDL+KR GITAGLCV+I+HVPEK G+R+E
Sbjct: 92  LDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFE 151

Query: 158 ANYSFYFGDYGHISVQGAYLTYQDTFLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYL 217
           A YSFYFGDYGH+SVQG YLTY+D+FLA+TGG+GIFEG YGQVKLQQ+V+P KLFYTFYL
Sbjct: 152 ATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYL 211

Query: 218 KGIP-DLPAELLGXXXXXXXXXXXXXXXXXXQPNATILNFTQ 258
           KG+  DLP EL G                  +P+  I N+T 
Sbjct: 212 KGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253


>AT3G25760.1 | Symbols: AOC1, ERD12 | AOC1 (ALLENE OXIDE CYCLASE 1);
           allene-oxide cyclase | chr3:9403972-9405105 FORWARD
          Length = 254

 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 117/197 (59%), Positives = 143/197 (72%), Gaps = 2/197 (1%)

Query: 63  KSIVTTAFFSKLCSESPKRKPAGKVQQLNVYEINERDRDSPAILKLSKKPELALGDLVPF 122
           K +  T   S+    +   +P+ KVQ+L+VYEIN+ DR SP ILK +      LGDLVPF
Sbjct: 59  KKLTPTRALSQNLGNTENPRPS-KVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPF 117

Query: 123 TNKLYSGDLQKRFGITAGLCVLIQHVPEKNGDRYEANYSFYFGDYGHISVQGAYLTYQDT 182
           TNKLY+GDL+KR GITAGLCV+I+HVPEKNGDR+EA YSFYFGDYGH+SVQG YLTY+D+
Sbjct: 118 TNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDS 177

Query: 183 FLAVTGGSGIFEGVYGQVKLQQIVFPYKLFYTFYLKGIP-DLPAELLGXXXXXXXXXXXX 241
           FLA+TGG+GIFEG YGQVKLQQ+V+P KLFYTFYLKG+  DLP EL+G            
Sbjct: 178 FLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPA 237

Query: 242 XXXXXXQPNATILNFTQ 258
                 +P+  + NFT 
Sbjct: 238 PEAKALKPSGVVSNFTN 254