Jatropha Genome Database
- JcCB0027041.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0027041.20 - phase: 0
(605 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32900.1 | Symbols: | starch synthase, putative | chr1:11920... 881 0.0
AT3G01180.1 | Symbols: AtSS2 | AtSS2 (starch synthase 2); transf... 347 1e-95
AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF SA... 339 2e-93
AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase, tr... 177 2e-44
AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch... 164 2e-40
>AT1G32900.1 | Symbols: | starch synthase, putative |
chr1:11920582-11923506 REVERSE
Length = 610
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/613 (69%), Positives = 495/613 (80%), Gaps = 11/613 (1%)
Query: 1 MATLTAA-QLVSRSS----HGSEA---KPQIGLRTQTMTYHGLRSLNMVDKLQMRKQSKA 52
MAT+TA+ VSR+S HG+ + QI L+ Q++T+ GLRS NMVD LQ R Q+K
Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQAKP 60
Query: 53 VATKAGKKVSATKNDRPSGNIICGQGMNLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARG 112
V+ K+ K+ S K +G I+C +GM++IF+GAEVGPWSKT PPA+AARG
Sbjct: 61 VSAKSSKRSSKVKT---AGKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARG 117
Query: 113 HRVMTVSPRYDQYRDAWDTSVLVQIKVGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVWG 172
HRVMT+ PRYDQY+DAWDT V+VQIKVGDK+E VRFFHCYKRGVDRVFVDHPIFL KV G
Sbjct: 118 HRVMTICPRYDQYKDAWDTCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVG 177
Query: 173 KTGSKIYGPRAGIDYKDNQMRFSLLCLAALEAPRILNLNSNKYFSGPYGEDVIFIANDWH 232
KTGSKIYGP G+DY DNQ+RFSLLC AALEAP++LNLNS+KYFSGPYGEDV+F+ANDWH
Sbjct: 178 KTGSKIYGPITGVDYNDNQLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWH 237
Query: 233 AAILPCYLKSIYKPMGIYQSAKVAFCIHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGY 292
A+LPCYLKS+Y+ G+Y +AKV FCIHNIAYQGRFAF D+SLLNLP +K SFDF+DGY
Sbjct: 238 TALLPCYLKSMYQSRGVYMNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGY 297
Query: 293 NKPVKGRKINWMKAGILESDRVLTVSPYYAQELVSGEDRGVELDNIIRKTGITGIVNGMD 352
KPVKGRKINWMKA ILE+ RVLTVSPYYAQEL+SG DRGVEL +R ++GI+NGMD
Sbjct: 298 EKPVKGRKINWMKAAILEAHRVLTVSPYYAQELISGVDRGVELHKYLRMKTVSGIINGMD 357
Query: 353 VQEWNPATDKYIDINYDATTVMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSD 412
VQEWNP+TDKYIDI YD TTV DAKPL+KEALQA VGLPVDR++P+IGFIGRLEEQKGSD
Sbjct: 358 VQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSD 417
Query: 413 ILVAAISQLVQHNVQIVILGTGKKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSD 472
ILV AIS+ + NVQ+VILGTGKK E QI +LE +P KA GVAKFNVPLAHMI AG+D
Sbjct: 418 ILVEAISKFMGLNVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGAD 477
Query: 473 FMLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGAFHVECDXXXXXX 532
F+++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVK+GYTGF +G F+V+C+
Sbjct: 478 FIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDD 537
Query: 533 XXXXXXXXXXXXXXYGTVALREMILNCMAQDLSWKGPARLWEKMLLDLEAAGSEPGVEGE 592
YGT A++EM+ NCM QD SWKGPARLWEK+LL L AGSE G EGE
Sbjct: 538 VIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGE 597
Query: 593 EIAPLAKENLATP 605
EIAPLAKEN+ATP
Sbjct: 598 EIAPLAKENVATP 610
>AT3G01180.1 | Symbols: AtSS2 | AtSS2 (starch synthase 2);
transferase, transferring glycosyl groups |
chr3:62456-65678 REVERSE
Length = 792
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/506 (40%), Positives = 275/506 (54%), Gaps = 26/506 (5%)
Query: 79 MNLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRYDQYRDAWDTSVLVQIK 138
MN+I V AE P+SKT P ++A RGHRVM V PRY +Y +A D V + K
Sbjct: 301 MNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYK 360
Query: 139 VGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVWGKTGSKIYGPRAGIDYKDNQMRFSLLC 198
V + V +FH + GVD VF+D P F + IYG + D R L C
Sbjct: 361 VAGQDMEVMYFHAFIDGVDFVFIDSPEFRH-----LSNNIYGG----NRLDILKRMVLFC 411
Query: 199 LAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPMGIYQSAKVAFC 258
AA+E P + Y G ++ FIANDWH A+LP YLK+ Y+ GI + +
Sbjct: 412 KAAVEVPWYVPCGGVCYGDG----NLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLV 467
Query: 259 IHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGYNKPVKGRKINWMKAGILESDRVLTVS 318
IHNIA+QGR DFS ++LP Y SF D PV G N AG+ +DRVLTVS
Sbjct: 468 IHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYD----PVGGEHFNIFAAGLKAADRVLTVS 523
Query: 319 PYYAQELVSGEDRGVELDNIIRKTG--ITGIVNGMDVQEWNPATDKYID----INYDATT 372
Y+ E+ + E G L NII + GIVNG+D QEWNP D Y+ NY
Sbjct: 524 HGYSWEVKTLEG-GWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLEN 582
Query: 373 VMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLVQHNVQIVILG 432
+ KP K ALQ E+GLPV ++PLIGFIGRL+ QKG D++ A+ ++ +VQ+V+LG
Sbjct: 583 LHIGKPQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLG 642
Query: 433 TGKKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDFMLIPSRFEPCGLIQLHAMR 492
TG+ E+ +RQ+E Y DKARG F+V AH I AG+D +L+PSRFEPCGL QL+AM
Sbjct: 643 TGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMN 702
Query: 493 YGTVPIVASTGGLVDTVKEGYTGFQMGAFHVECDXXXXXXXXXXXXXXXXXXXXYGTVAL 552
YGT+P+V + GGL DTV++ + + D Y +
Sbjct: 703 YGTIPVVHAVGGLRDTVQQ-FDPYSETGLGWTFDSAEAGKLIHALGNCLLTYREYKE-SW 760
Query: 553 REMILNCMAQDLSWKGPARLWEKMLL 578
+ M QDLSW A +E++L+
Sbjct: 761 EGLQRRGMTQDLSWDNAAEKYEEVLV 786
>AT5G24300.1 | Symbols: SSI1, SSI, ATSS1 | SSI1 (SUPPRESSOR OF
SALICYLIC ACID INSENSITIVITY 1); starch synthase/
transferase, transferring glycosyl groups |
chr5:8266934-8270860 FORWARD
Length = 652
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/448 (43%), Positives = 268/448 (59%), Gaps = 35/448 (7%)
Query: 80 NLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRY-------DQYRDAWDTS 132
NL+FV +E P+SKT P A+A RGHRVM +SPRY Y A D
Sbjct: 143 NLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARAKDLG 202
Query: 133 VLVQIKVGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVWGKTGSKIYGPRAGIDYKDNQM 192
+ V + + V F+H Y+ GVD VFVDH K + + G+ YG G + DNQ
Sbjct: 203 IRVTVNCFGGSQEVSFYHEYRDGVDWVFVDH-----KSYHRPGNP-YGDSKGA-FGDNQF 255
Query: 193 RFSLLCLAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPMGIYQS 252
RF+LLC AA EAP +L L F+ YGE +F+ NDWHA ++P L + Y+P G+Y+
Sbjct: 256 RFTLLCHAACEAPLVLPLGG---FT--YGEKSLFLVNDWHAGLVPILLAAKYRPYGVYKD 310
Query: 253 AKVAFCIHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGYNKPV--------KGRKINWM 304
A+ IHN+A+QG + ++ L LP ++ G+ G+ P G +N +
Sbjct: 311 ARSILIIHNLAHQGVEPAATYTNLGLPSEWYGAV----GWVFPTWARTHALDTGEAVNVL 366
Query: 305 KAGILESDRVLTVSPYYAQELVSGEDRGVELDNII--RKTGITGIVNGMDVQEWNPATDK 362
K I+ SDR++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP+TD+
Sbjct: 367 KGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDE 425
Query: 363 YIDINYDATTVMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLV 422
+I +Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A L+
Sbjct: 426 HIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLM 484
Query: 423 QHNVQIVILGTGKKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDFMLIPSRFEP 482
++Q V+LG+G +E +R +E Y DK RG FNVP++H I AG D +L+PSRFEP
Sbjct: 485 VDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEP 544
Query: 483 CGLIQLHAMRYGTVPIVASTGGLVDTVK 510
CGL QL+AMRYGT+P+V TGGL DTV+
Sbjct: 545 CGLNQLYAMRYGTIPVVHGTGGLRDTVE 572
>AT4G18240.1 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase,
transferring glycosyl groups | chr4:10082221-10087044
FORWARD
Length = 1040
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 215/456 (47%), Gaps = 63/456 (13%)
Query: 78 GMNLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRYD--QY---RDAWDTS 132
G+ ++ + AE+ P +K A+ +GH V + P+YD QY RD
Sbjct: 541 GLYVVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALD 600
Query: 133 VLVQIKVGDKIETVRFFHCYKRGVDRVFVD--HPIFLEKVWGKTGSKIYGPRAGIDYKDN 190
+V+ K+ + + G+ F++ HP W + YG +D+
Sbjct: 601 TVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKF--FWR---GQFYGE------QDD 649
Query: 191 QMRFSLLCLAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPMGIY 250
RFS AALE L L S K D+I +DW A + +Y P G+
Sbjct: 650 FRRFSYFSRAALE----LLLQSGK------KPDIIH-CHDWQTAFVAPLYWDLYAPKGL- 697
Query: 251 QSAKVAFCIHNIAYQGRFAFS-------DFSLLNLPDQYKGSFDFIDGYNKPVKGRKINW 303
SA++ F HN YQG + S D + LN PD+ + G ++N
Sbjct: 698 DSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDH----------SSGDRVNP 747
Query: 304 MKAGILESDRVLTVSPYYAQELVSGED-RGVELDNIIRKTGITGIVNGMDVQEWNPATDK 362
+K I+ S+ V TVSP YAQE+ + E +G+ GI+NG+D WNPATD
Sbjct: 748 VKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDP 807
Query: 363 YIDINYDATTVMDAKPLLKEALQAEVGLP-VDRNIPLIGFIGRLEEQKGSDILVAAISQL 421
++ ++A + K K AL+ ++GL + PL+G I RL QKG ++ AI +
Sbjct: 808 FLKAQFNAKD-LQGKEENKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRT 866
Query: 422 VQHNVQIVILGTGK--------KGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDF 473
++ Q V+LG+ +G E+Q + D R + K++ L+H I A SD
Sbjct: 867 LELGGQFVLLGSSPVPHIQREFEGIEQQFKS-----HDHVRLLLKYDEALSHTIYAASDL 921
Query: 474 MLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 509
+IPS FEPCGL Q+ AMRYG++PI TGGL D+V
Sbjct: 922 FIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSV 957
>AT1G11720.1 | Symbols: ATSS3 | ATSS3 (starch synthase 3); starch
synthase/ transferase, transferring glycosyl groups |
chr1:3952511-3956840 FORWARD
Length = 1025
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 197/447 (44%), Gaps = 92/447 (20%)
Query: 79 MNLIFVGAEVGPWSKTXXXXXXXXXXPPAMAARGHRVMTVSPRYDQYRDAWDTSVLVQIK 138
++++ + E+ P +K A+ H V V P+YD + +
Sbjct: 577 LHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNF--------- 627
Query: 139 VGDKIETVRFFHCYKRGVDRVFVDHPIFLEKVW-GKT-GSKIY--GPRAGIDYK------ 188
++ ++F Y G + KVW GK G +Y P+ G+ +
Sbjct: 628 ----VKDLQFNRSYHWGGTEI---------KVWHGKVEGLSVYFLDPQNGLFQRGCVYGC 674
Query: 189 -DNQMRFSLLCLAALEAPRILNLNSNKYFSGPYGEDVIFIANDWHAAILPCYLKSIYKPM 247
D+ RF C AALE G + D++ +DW +A + K Y
Sbjct: 675 ADDAGRFGFFCHAALEF----------LLQGGFHPDILH-CHDWSSAPVSWLFKDHYTQY 723
Query: 248 GIYQSAKVAFCIHNIAYQGRFAFSDFSLLNLPDQYKGSFDFIDGYNKPVKGRKINWMKAG 307
G+ ++ ++ F IHN+ + N +
Sbjct: 724 GLIKT-RIVFTIHNLEFGA-----------------------------------NAIGKA 747
Query: 308 ILESDRVLTVSPYYAQELVSGEDRGVELDNIIRKTGITGIVNGMDVQEWNPATDKYIDIN 367
+ +D+ TVSP YA+E+ L GI+NG+D W+P D +I +
Sbjct: 748 MTFADKATTVSPTYAKEVAGNSVISAHL------YKFHGIINGIDPDIWDPYNDNFIPVP 801
Query: 368 YDATTVMDAKPLLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVAAISQLVQHNVQ 427
Y + V++ K KE LQ +GL + P++G I RL QKG ++ AI + ++ N Q
Sbjct: 802 YTSENVVEGKRAAKEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQ 860
Query: 428 IVILGTG-----KKGFEKQIRQLEVLYPDKARGVAKFNVPLAHMIIAGSDFMLIPSRFEP 482
+V+LG+ + F QL + D+AR V ++ PL+H+I AG+DF+L+PS FEP
Sbjct: 861 VVLLGSAPDPRIQNDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEP 920
Query: 483 CGLIQLHAMRYGTVPIVASTGGLVDTV 509
CGL QL AMRYG VP+V TGGL DTV
Sbjct: 921 CGLTQLIAMRYGAVPVVRKTGGLFDTV 947