Jatropha Genome Database

JcCB0026001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0026001.10 + phase: 0 
         (372 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21400.1 | Symbols:  | 2-oxoisovalerate dehydrogenase, putati...   613   e-176
AT5G09300.1 | Symbols:  | 2-oxoisovalerate dehydrogenase, putati...   605   e-173
AT5G09300.2 | Symbols:  | 2-oxoisovalerate dehydrogenase, putati...   604   e-173
AT5G34780.1 | Symbols:  | dehydrogenase E1 component family prot...   335   4e-92
AT1G59900.1 | Symbols: AT-E1 ALPHA | AT-E1 ALPHA; oxidoreductase...   155   4e-38
AT1G24180.1 | Symbols: IAR4 | IAR4; oxidoreductase, acting on th...   144   7e-35
AT1G01090.1 | Symbols: PDH-E1 ALPHA | PDH-E1 ALPHA (PYRUVATE DEH...   129   3e-30

>AT1G21400.1 | Symbols:  | 2-oxoisovalerate dehydrogenase, putative
           / 3-methyl-2-oxobutanoate dehydrogenase, putative /
           branched-chain alpha-keto acid dehydrogenase E1 alpha
           subunit, putative | chr1:7493492-7496240 FORWARD
          Length = 472

 Score =  613 bits (1582), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 283/375 (75%), Positives = 323/375 (86%), Gaps = 8/375 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENNDFD--------EMYREMVTLQMMDTIFYEAQR 52
           M+FI +S+ +R+PCYR+LD+DG +  ++DF          MY +M TLQ+MD IFYEAQR
Sbjct: 93  MKFIPESSSRRIPCYRVLDEDGRIIPDSDFIPVSEKLAVRMYEQMATLQVMDHIFYEAQR 152

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGRISFY+TS GEEAINIASAAAL PDDVVLPQYREPGVLLWRGFTLEEF NQCFGNKAD
Sbjct: 153 QGRISFYLTSVGEEAINIASAAALSPDDVVLPQYREPGVLLWRGFTLEEFANQCFGNKAD 212

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
           YGKGRQMPIHYGS + NYFT+SSPIATQLPQA GV YSLKMDKK+AC V +IGDGGTSEG
Sbjct: 213 YGKGRQMPIHYGSNRLNYFTISSPIATQLPQAAGVGYSLKMDKKNACTVTFIGDGGTSEG 272

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHA LNFAAVMEAPV+FICRNNGWAISTHISEQFRSDGIVVKGQAYGI+SIRVDGNDAL
Sbjct: 273 DFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDAL 332

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           AVY  + +ARE+A+ EQRP+L+E +TYRVGHHSTSDDSTKYR  +EI+YWKM RNPVNRF
Sbjct: 333 AVYSAVRSAREMAVTEQRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRF 392

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
           RKWVE NGWWS+ DES++RS+ RKQLL+AIQ AEK EK PL +LF+DVYD+ P +L EQE
Sbjct: 393 RKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDVYDVKPKNLEEQE 452

Query: 353 KQLRETINRHPHDYP 367
             L+E + + P DYP
Sbjct: 453 LGLKELVKKQPQDYP 467


>AT5G09300.1 | Symbols:  | 2-oxoisovalerate dehydrogenase, putative
           / 3-methyl-2-oxobutanoate dehydrogenase, putative /
           branched-chain alpha-keto acid dehydrogenase E1 alpha
           subunit, putative | chr5:2884282-2886797 REVERSE
          Length = 472

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 278/380 (73%), Positives = 327/380 (86%), Gaps = 8/380 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENNDFDE--------MYREMVTLQMMDTIFYEAQR 52
           ++FIS+S+++RVPCYR+LDD+G+L  N+ F +        +Y +MVTLQ+MD IFYEAQR
Sbjct: 93  IQFISESDKERVPCYRVLDDNGQLITNSQFVQVSEEVAVKIYSDMVTLQIMDNIFYEAQR 152

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGR+SFY T+ GEEAINIASAAAL P DV+ PQYREPGVLLWRGFTL+EF NQCFGNK+D
Sbjct: 153 QGRLSFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSD 212

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
           YGKGRQMP+HYGS K NYFTVS+ IATQLP AVG AYSLKMDKKDACAV Y GDGGTSEG
Sbjct: 213 YGKGRQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDKKDACAVTYFGDGGTSEG 272

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHAALN AAVMEAPV+FICRNNGWAIST  S+QFRSDG+VVKG+AYGI+SIRVDGNDAL
Sbjct: 273 DFHAALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDAL 332

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           A+Y  +  ARE+AI EQRPIL+EALTYRVGHHSTSDDST+YR   EIE+W   RNP++RF
Sbjct: 333 AMYSAVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRF 392

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
           R W+E NGWWSD  ES++RS I+K++L+A++VAEKTEKP L ++F DVYD+PPS+LREQE
Sbjct: 393 RTWIESNGWWSDKTESDLRSRIKKEMLEALRVAEKTEKPNLQNMFSDVYDVPPSNLREQE 452

Query: 353 KQLRETINRHPHDYPSDVPL 372
             +R+TIN HP DYPSDVPL
Sbjct: 453 LLVRQTINSHPQDYPSDVPL 472


>AT5G09300.2 | Symbols:  | 2-oxoisovalerate dehydrogenase, putative
           / 3-methyl-2-oxobutanoate dehydrogenase, putative /
           branched-chain alpha-keto acid dehydrogenase E1 alpha
           subunit, putative | chr5:2884282-2886291 REVERSE
          Length = 401

 Score =  604 bits (1557), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 278/380 (73%), Positives = 327/380 (86%), Gaps = 8/380 (2%)

Query: 1   MRFISQSNEKRVPCYRLLDDDGELTENNDFDE--------MYREMVTLQMMDTIFYEAQR 52
           ++FIS+S+++RVPCYR+LDD+G+L  N+ F +        +Y +MVTLQ+MD IFYEAQR
Sbjct: 22  IQFISESDKERVPCYRVLDDNGQLITNSQFVQVSEEVAVKIYSDMVTLQIMDNIFYEAQR 81

Query: 53  QGRISFYVTSNGEEAINIASAAALGPDDVVLPQYREPGVLLWRGFTLEEFTNQCFGNKAD 112
           QGR+SFY T+ GEEAINIASAAAL P DV+ PQYREPGVLLWRGFTL+EF NQCFGNK+D
Sbjct: 82  QGRLSFYATAIGEEAINIASAAALTPQDVIFPQYREPGVLLWRGFTLQEFANQCFGNKSD 141

Query: 113 YGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGVAYSLKMDKKDACAVAYIGDGGTSEG 172
           YGKGRQMP+HYGS K NYFTVS+ IATQLP AVG AYSLKMDKKDACAV Y GDGGTSEG
Sbjct: 142 YGKGRQMPVHYGSNKLNYFTVSATIATQLPNAVGAAYSLKMDKKDACAVTYFGDGGTSEG 201

Query: 173 DFHAALNFAAVMEAPVIFICRNNGWAISTHISEQFRSDGIVVKGQAYGIQSIRVDGNDAL 232
           DFHAALN AAVMEAPV+FICRNNGWAIST  S+QFRSDG+VVKG+AYGI+SIRVDGNDAL
Sbjct: 202 DFHAALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDAL 261

Query: 233 AVYKTICAAREIAINEQRPILVEALTYRVGHHSTSDDSTKYRPVNEIEYWKMERNPVNRF 292
           A+Y  +  ARE+AI EQRPIL+EALTYRVGHHSTSDDST+YR   EIE+W   RNP++RF
Sbjct: 262 AMYSAVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRF 321

Query: 293 RKWVERNGWWSDADESEVRSSIRKQLLKAIQVAEKTEKPPLGDLFDDVYDLPPSDLREQE 352
           R W+E NGWWSD  ES++RS I+K++L+A++VAEKTEKP L ++F DVYD+PPS+LREQE
Sbjct: 322 RTWIESNGWWSDKTESDLRSRIKKEMLEALRVAEKTEKPNLQNMFSDVYDVPPSNLREQE 381

Query: 353 KQLRETINRHPHDYPSDVPL 372
             +R+TIN HP DYPSDVPL
Sbjct: 382 LLVRQTINSHPQDYPSDVPL 401


>AT5G34780.1 | Symbols:  | dehydrogenase E1 component family protein
           | chr5:12961682-12963892 REVERSE
          Length = 365

 Score =  335 bits (858), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 159/222 (71%), Positives = 189/222 (85%)

Query: 145 VGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAISTHIS 204
           +G++ +    +K+ACAV +IGDGGTSEGDFHA LNFAAVMEAPV+FICRNNGWAISTHIS
Sbjct: 15  IGLSKAKDCWEKNACAVTFIGDGGTSEGDFHAGLNFAAVMEAPVVFICRNNGWAISTHIS 74

Query: 205 EQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYRVGHH 264
           EQFRSDGIVVKGQAYGI+SIRVDGNDALAVY  +C+ARE+A+ EQRP+L+E + YRVGHH
Sbjct: 75  EQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVCSAREMAVTEQRPVLIEMMIYRVGHH 134

Query: 265 STSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKAIQV 324
           STSDDSTKYR  +EI+YWKM RN VNRFRK VE NGWWS+ DES++RS+ RKQLL+AIQ 
Sbjct: 135 STSDDSTKYRAADEIQYWKMSRNSVNRFRKSVEDNGWWSEEDESKLRSNARKQLLQAIQA 194

Query: 325 AEKTEKPPLGDLFDDVYDLPPSDLREQEKQLRETINRHPHDY 366
           AEK EK PL +LF+DVYD+ P +L E+E  L+E I + P DY
Sbjct: 195 AEKWEKQPLTELFNDVYDVKPKNLEEEELGLKELIEKQPQDY 236


>AT1G59900.1 | Symbols: AT-E1 ALPHA | AT-E1 ALPHA; oxidoreductase,
           acting on the aldehyde or oxo group of donors, disulfide
           as acceptor / pyruvate dehydrogenase
           (acetyl-transferring) | chr1:22051368-22053660 FORWARD
          Length = 389

 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 166/321 (51%), Gaps = 10/321 (3%)

Query: 25  TENNDFDEMYREMVTLQMM----DTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDD 80
           + + +  + +R M  ++ M    D+++     +G    Y   +G+EA+ I   AA+   D
Sbjct: 54  SSSQELLDFFRTMALMRRMEIAADSLYKAKLIRGFCHLY---DGQEAVAIGMEAAITKKD 110

Query: 81  VVLPQYREPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQ 140
            ++  YR+  + L RG +L E  ++  G +A   KG+   +H+  K+ +++     +  Q
Sbjct: 111 AIITAYRDHCIFLGRGGSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQ 170

Query: 141 LPQAVGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAIS 200
           +P   G+A++ K +K++A   A  GDG  ++G    ALN +A+ + P I +C NN + + 
Sbjct: 171 VPLGCGIAFAQKYNKEEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMG 230

Query: 201 THISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYR 260
           T      +S     +G    +  ++VDG DA AV +    A++ A+ E+ PI++E  TYR
Sbjct: 231 TAEWRAAKSPSYYKRGDY--VPGLKVDGMDAFAVKQACKFAKQHAL-EKGPIILEMDTYR 287

Query: 261 VGHHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLK 320
              HS SD  + YR  +EI   + ER+P+ R +K V  +   ++ +  ++   IRK++  
Sbjct: 288 YHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDD 347

Query: 321 AIQVAEKTEKPPLGDLFDDVY 341
           AI  A+    P   +LF +VY
Sbjct: 348 AIAKAKDCPMPEPSELFTNVY 368


>AT1G24180.1 | Symbols: IAR4 | IAR4; oxidoreductase, acting on the
           aldehyde or oxo group of donors, disulfide as acceptor /
           pyruvate dehydrogenase (acetyl-transferring) |
           chr1:8560777-8563382 REVERSE
          Length = 393

 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 168/341 (49%), Gaps = 12/341 (3%)

Query: 25  TENNDFDEMYREMVTLQMM----DTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDD 80
           T + +    +R+M  ++ M    D+++     +G    Y   +G+EA+ +   AA+   D
Sbjct: 58  TSSEEILAFFRDMARMRRMEIAADSLYKAKLIRGFCHLY---DGQEALAVGMEAAITKKD 114

Query: 81  VVLPQYREPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQ 140
            ++  YR+    + RG  L +  ++  G K     G+   +H+  K  +++     +  Q
Sbjct: 115 AIITSYRDHCTFIGRGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQ 174

Query: 141 LPQAVGVAYSLKMDKKDACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAIS 200
           +P   G+A++ K +K +A   A  GDG  ++G    ALN +A+ + P I +C NN + + 
Sbjct: 175 IPLGCGLAFAQKYNKDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMG 234

Query: 201 THISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYR 260
           T      +S     +G    +  ++VDG DALAV +    A+E A+ +  PI++E  TYR
Sbjct: 235 TATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKEHAL-KNGPIILEMDTYR 291

Query: 261 VGHHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLK 320
              HS SD  + YR  +EI   +  R+P+ R RK +  +   ++ +  ++   IRK++  
Sbjct: 292 YHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKELKDMEKEIRKEVDD 351

Query: 321 AIQVAEKTEKPPLGDLFDDVY--DLPPSDLREQEKQLRETI 359
           A+  A+++  P   +LF ++Y  D          K+L+ T+
Sbjct: 352 AVAQAKESPIPDASELFTNMYVKDCGVESFGADRKELKVTL 392


>AT1G01090.1 | Symbols: PDH-E1 ALPHA | PDH-E1 ALPHA (PYRUVATE
           DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase
           (acetyl-transferring) | chr1:47705-49166 REVERSE
          Length = 428

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 15/323 (4%)

Query: 32  EMYREMVTLQ----MMDTIFYEAQRQGRISFYVTSNGEEAINIASAAALGPDDVVLPQYR 87
           E+Y +M+  +    M   ++Y  +  G +  Y   NG+EA++      L   D V+  YR
Sbjct: 86  ELYEDMILGRSFEDMCAQMYYRGKMFGFVHLY---NGQEAVSTGFIKLLTKSDSVVSTYR 142

Query: 88  EPGVLLWRGFTLEEFTNQCFGNKADYGKGRQMPIHYGSKKHNYFTVSSPIATQLPQAVGV 147
           +    L +G +     ++ FG      +G+   +H  SK+HN     + I   +P A G 
Sbjct: 143 DHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPVATGA 202

Query: 148 AYSLKMDKK------DACAVAYIGDGGTSEGDFHAALNFAAVMEAPVIFICRNNGWAIST 201
           A+S K  ++      D   VA+ GDG  + G F   LN AA+ + P+IF+  NN WAI  
Sbjct: 203 AFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLWAIGM 262

Query: 202 HISEQFRSDGIVVKGQAYGIQSIRVDGNDALAVYKTICAAREIAINEQRPILVEALTYRV 261
                     I  KG A+G+  + VDG D L V +    A   A   + P LVE  TYR 
Sbjct: 263 SHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECETYRF 322

Query: 262 GHHSTSDDSTKYRPVNEIEYWKMERNPVNRFRKWVERNGWWSDADESEVRSSIRKQLLKA 321
             HS +D         + +Y    R+P+   +K++  N    +A+   +   I + + +A
Sbjct: 323 RGHSLADPDELRDAAEKAKY--AARDPIAALKKYLIENKLAKEAELKSIEKKIDELVEEA 380

Query: 322 IQVAEKTEKPPLGDLFDDVYDLP 344
           ++ A+ + +P    L ++V+  P
Sbjct: 381 VEFADASPQPGRSQLLENVFADP 403