Jatropha Genome Database

JcCB0025091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0025091.10 - phase: 0 
         (148 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63980.2 | Symbols:  | D111/G-patch domain-containing protein...   191   1e-49
AT1G63980.1 | Symbols:  | D111/G-patch domain-containing protein...   191   2e-49

>AT1G63980.2 | Symbols:  | D111/G-patch domain-containing protein |
           chr1:23740646-23743054 FORWARD
          Length = 389

 Score =  191 bits (485), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 109/148 (73%), Gaps = 8/148 (5%)

Query: 1   MAAPEAPVCYVGVARASPAFRLMKQMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGVEK 60
           MAAPEAPV YVG+ + S AF+LMK MGWEEGEGLGKDKQGIKGYVRV NKQDT+GVG++K
Sbjct: 1   MAAPEAPVKYVGICKDSAAFKLMKSMGWEEGEGLGKDKQGIKGYVRVTNKQDTSGVGLDK 60

Query: 61  PSNWAFDTTQFDSILKRLKVQAAHXXXXXXXXXXXXXXXXXXXSTGLQEP-----VVKAT 115
           P+ WAFDTTQFD+ILK+LKVQAA                     +   EP     V K T
Sbjct: 61  PNPWAFDTTQFDNILKKLKVQAAPTKTSKNDDDKEDESEDDAVKS---EPAKLKTVAKVT 117

Query: 116 RPQGRYKRRERGKLVQSYSSKDLEGILV 143
           RPQGRYKRRE+GKLV SYSSKDLEGILV
Sbjct: 118 RPQGRYKRREKGKLVNSYSSKDLEGILV 145


>AT1G63980.1 | Symbols:  | D111/G-patch domain-containing protein |
           chr1:23740646-23743054 FORWARD
          Length = 391

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/148 (66%), Positives = 109/148 (73%), Gaps = 6/148 (4%)

Query: 1   MAAPEAPVCYVGVARASPAFRLMKQMGWEEGEGLGKDKQGIKGYVRVKNKQDTTGVGVEK 60
           MAAPEAPV YVG+ + S AF+LMK MGWEEGEGLGKDKQGIKGYVRV NKQDT+GVG++K
Sbjct: 1   MAAPEAPVKYVGICKDSAAFKLMKSMGWEEGEGLGKDKQGIKGYVRVTNKQDTSGVGLDK 60

Query: 61  PSNWAFDTTQFDSILKRLKVQAAHXXXXXXXXXXXXXXXXXXXSTGLQEP-----VVKAT 115
           P+ WAFDTTQFD+ILK+LKVQAA                    +    EP     V K T
Sbjct: 61  PNPWAFDTTQFDNILKKLKVQAAPTKTSKNDDDSDKEDESEDDAVK-SEPAKLKTVAKVT 119

Query: 116 RPQGRYKRRERGKLVQSYSSKDLEGILV 143
           RPQGRYKRRE+GKLV SYSSKDLEGILV
Sbjct: 120 RPQGRYKRREKGKLVNSYSSKDLEGILV 147