Jatropha Genome Database

JcCB0022951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0022951.10 + phase: 0 /pseudo
         (370 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G13810.1 | Symbols: ALD1 | ALD1 (AGD2-LIKE DEFENSE RESPONSE P...   209   2e-54
AT4G33680.1 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2)...   196   2e-50

>AT2G13810.1 | Symbols: ALD1 | ALD1 (AGD2-LIKE DEFENSE RESPONSE
           PROTEIN1); catalytic/ pyridoxal phosphate binding /
           transaminase/ transferase, transferring nitrogenous
           groups | chr2:5768489-5772138 FORWARD
          Length = 456

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 96/147 (65%), Positives = 120/147 (81%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           +E LK+ YLFPEI+ RE EH++K P+ +LI LG GDTT+PIPE ITS M+  A+ LST++
Sbjct: 44  LEKLKNNYLFPEINRRELEHIEKHPNVQLISLGTGDTTEPIPEQITSHMSNFAHGLSTVE 103

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GY+GYG EQGN  LR AIAE FY+D+ +K  E+FVSDGAQ+DISRLQ+LLGSNVT+AVQD
Sbjct: 104 GYRGYGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLLGSNVTIAVQD 163

Query: 121 PSFPGYIDSSVIIGQAGKYEEETGNFQ 147
           P+FP YIDSSVIIGQ G + E+T  +Q
Sbjct: 164 PTFPAYIDSSVIIGQTGHFHEKTKKYQ 190



 Score =  194 bits (493), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 104/143 (72%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           +P  LLYSNGFP+I DF+RIV T FNGASNI QAGGLACLS+ G K + SV NYYKEN K
Sbjct: 298 IPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEIRSVNNYYKENRK 357

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           IL++   SLGLKVYGG NAPY+WVHF G  SWDVFNEILE T I+TVP          Y+
Sbjct: 358 ILMDTLVSLGLKVYGGVNAPYLWVHFKGSKSWDVFNEILENTHIITVPGSGFGPGGEEYL 417

Query: 348 RISAFGHRKSILEASARLTKLFN 370
           RIS FG R  I+EAS RL   FN
Sbjct: 418 RISGFGRRDHIVEASKRLQNFFN 440


>AT4G33680.1 | Symbols: AGD2 | AGD2 (ABERRANT GROWTH AND DEATH 2);
           L,L-diaminopimelate aminotransferase/ transaminase |
           chr4:16171847-16174630 REVERSE
          Length = 461

 Score =  196 bits (499), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 87/142 (61%), Positives = 110/142 (77%)

Query: 228 VPKRLLYSNGFPVIKDFNRIVCTCFNGASNIVQAGGLACLSNEGYKAVNSVVNYYKENAK 287
           +PK+LLYS+GFPV KDFNRI+CTCFNGASNI QAG LACL+ EG +A++ V+ +YKEN  
Sbjct: 319 IPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTN 378

Query: 288 ILVEAFQSLGLKVYGGKNAPYIWVHFPGMNSWDVFNEILEKTDIVTVPXXXXXXXXXXYI 347
           I+++ F SLG  VYGGKNAPY+WVHFP  +SWDVF EILEKT +VT P          ++
Sbjct: 379 IIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFV 438

Query: 348 RISAFGHRKSILEASARLTKLF 369
           R+SAFGHR++ILEA  R  +L+
Sbjct: 439 RVSAFGHRENILEACRRFKQLY 460



 Score =  191 bits (486), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 87/142 (61%), Positives = 113/142 (79%)

Query: 1   MESLKSGYLFPEISIREFEHMQKRPHARLIRLGIGDTTQPIPEIITSAMAEHAYALSTLQ 60
           M  L++GYLFPEI+ R   H+ K P A++I LGIGDTT+PIPE+ITSAMA+ A+ LST++
Sbjct: 65  MSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIE 124

Query: 61  GYKGYGAEQGNMDLRMAIAERFYKDMGIKGQEIFVSDGAQADISRLQMLLGSNVTVAVQD 120
           GY GYGAEQG   LR AIA+ FY  +GI   ++FVSDGA+ DISRLQ++ GSNVT+AVQD
Sbjct: 125 GYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGSNVTIAVQD 184

Query: 121 PSFPGYIDSSVIIGQAGKYEEE 142
           PS+P Y+DSSVI+GQ G++  +
Sbjct: 185 PSYPAYVDSSVIMGQTGQFNTD 206