Jatropha Genome Database

JcCB0019891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0019891.10 + phase: 1 /partial
         (584 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10490.1 | Symbols:  | unknown protein | chr1:3453589-3459925...   756   0.0  
AT3G57940.1 | Symbols:  | unknown protein | chr3:21449560-214558...   727   0.0  

>AT1G10490.1 | Symbols:  | unknown protein | chr1:3453589-3459925
            FORWARD
          Length = 1028

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/587 (64%), Positives = 445/587 (75%), Gaps = 11/587 (1%)

Query: 2    LFKKIELSESIRYASGDPIESWLNALLCLDVTNXXXXXXXXXXXXECNLYYVNRDTLFSY 61
            LFKKIELSESIRYASGDPIESWLN LLCLDV N            +C+LYYVNRDTLFSY
Sbjct: 449  LFKKIELSESIRYASGDPIESWLNGLLCLDVANCLPNPACHPLPSQCDLYYVNRDTLFSY 508

Query: 62   HKDSELFLQRMMALYVASHYKNSPNDLQLLADAPAHHLFVLLGPVDESKNQLPDILCVIQ 121
            HKDSELFLQRMMAL V+SHYKNSPNDLQLL+DAPAHHLFVLLGPVDESKNQLPDILCVIQ
Sbjct: 509  HKDSELFLQRMMALCVSSHYKNSPNDLQLLSDAPAHHLFVLLGPVDESKNQLPDILCVIQ 568

Query: 122  VCLEGQISRQSAIKSLSDGHQPFGDQIPWKFCEQFRDTGFPSLSGARIVRIATHPSAMRL 181
            VCLEGQISR+SA KSL +GH P GDQIPWKFCEQFRD  FP LSGARIVRIA HP+AM++
Sbjct: 569  VCLEGQISRKSAEKSLREGHSPHGDQIPWKFCEQFRDVVFPKLSGARIVRIAVHPNAMKM 628

Query: 182  GYGSTAVELLTRYYEGQFTPISEVDFENNVETPQVRIMEAAEKVSLLEENIKPRTDLPHL 241
            GYGS AVELLTRY+EGQ   ISE D E  VE   VR+ EAA KVSLLEE IKPR +LP L
Sbjct: 629  GYGSAAVELLTRYFEGQLASISEGDDELEVEPSPVRVTEAAAKVSLLEEQIKPRANLPPL 688

Query: 242  LVTLRERRPEKLHYLGVSFGLTLDLFRFWGKHKFAPFYIGQIPSTVTGEHTCMVLKP--L 299
            LV LR+RRPE+LHY+GVSFGLTLDLFRFW KHKFAPFYI QIPS VTGEHTCM+LKP  L
Sbjct: 689  LVPLRDRRPERLHYIGVSFGLTLDLFRFWRKHKFAPFYISQIPSAVTGEHTCMLLKPLTL 748

Query: 300  NNDDFEVSGSDEWGFFGPFYQAFRLRFSRLLESCFRAMEYKLAMSVLAPKINYADTDTKA 359
            +ND+FEV  SDE GFF PFY+ FR+RFS+LL   F+ M+YKLAMSVL PKIN+ + D   
Sbjct: 749  SNDEFEVDESDELGFFAPFYKDFRIRFSKLLSDKFKKMDYKLAMSVLNPKINFPEVDL-- 806

Query: 360  TSSTPEGFWKSLSFEITADDMQRLKAYTDNLADYRLILDSVSVLARLYFRGKLPVTLSYV 419
            T ++P+GF K L   ++  DM+R +AYT NL D+ L+ D    LA  YF+ KLPV+LSYV
Sbjct: 807  TGNSPDGFLKKLDGVLSPYDMERFRAYTANLVDFNLVYDICKTLAHHYFQEKLPVSLSYV 866

Query: 420  QASILLCIGLQKQDFTYIEGQLKLERTQILSLFMKAMRRFHKYLYGIASDEIQSTLPQLK 479
            QAS+LLC+GLQ+ DF+ IE Q++LER QI SL +K  ++ +KYL GIA+ E++STLP+LK
Sbjct: 867  QASVLLCLGLQESDFSSIERQMQLERGQIYSLLLKVGKKLYKYLNGIATKELESTLPRLK 926

Query: 480  ERVLEPLKISVEDDLNEAAKQVEDEMKTKTEA-LNPELLQQYAIVDRDGDFENAXXXXXX 538
            +RVLEP K+SV++DL E AK+VE++M+ + E  L+PELL Q+AI D++     A      
Sbjct: 927  DRVLEPHKVSVDEDLREGAKEVEEQMRARIEELLDPELLDQFAIGDKE-----AEALQKS 981

Query: 539  XXXXXXXXXXXXXXTKVEKHGKQESHKKGKRRKGD-HSPKSNKKSKS 584
                          T  +K       K  K+R  D HS  SNKK ++
Sbjct: 982  KISSSGLISIESTKTDNKKEKPSGFDKSAKKRGNDKHSSTSNKKRRA 1028


>AT3G57940.1 | Symbols:  | unknown protein | chr3:21449560-21455834
           FORWARD
          Length = 1028

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/528 (66%), Positives = 420/528 (79%), Gaps = 3/528 (0%)

Query: 2   LFKKIELSESIRYASGDPIESWLNALLCLDVTNXXXXXXXXXXXXECNLYYVNRDTLFSY 61
           LFKKIEL+ESIRY SGDPIESWLN LLCLDV              +C+LYYVNRDTLFSY
Sbjct: 447 LFKKIELTESIRYGSGDPIESWLNGLLCLDVATCLPNPACHPSPSQCDLYYVNRDTLFSY 506

Query: 62  HKDSELFLQRMMALYVASHYKNSPNDLQLLADAPAHHLFVLLGPVDESKNQLPDILCVIQ 121
           HKDSELFLQRMMAL V+SHYKNSPNDLQLLADAPAHHLFVLLGPVDES+N++PDILCVIQ
Sbjct: 507 HKDSELFLQRMMALCVSSHYKNSPNDLQLLADAPAHHLFVLLGPVDESQNKIPDILCVIQ 566

Query: 122 VCLEGQISRQSAIKSLSDGHQPFGDQIPWKFCEQFRDTGFPSLSGARIVRIATHPSAMRL 181
           VCLEG+IS  SA++SL DGH P+GDQIPWKFCEQFRDT FP  SGARIVRIA HP+AM++
Sbjct: 567 VCLEGKISENSALQSLRDGHSPYGDQIPWKFCEQFRDTEFPGFSGARIVRIAVHPNAMKM 626

Query: 182 GYGSTAVELLTRYYEGQFTPISEVDFENNVETPQVRIMEAAEKVSLLEENIKPRTDLPHL 241
           GYGS AVELLTRY+EGQ  PISE + + +VE   +++ EAAEKVS+LEE +KPRT+LP L
Sbjct: 627 GYGSAAVELLTRYFEGQIAPISEAEDKVDVEHAPIKVTEAAEKVSMLEEQVKPRTNLPPL 686

Query: 242 LVTLRERRPEKLHYLGVSFGLTLDLFRFWGKHKFAPFYIGQIPSTVTGEHTCMVLKPLNN 301
           LV L +RRPEKLHY+GVSFGLTLDLFRFW KH FAPFY+ QIPS VTGEHTCM+LKPL N
Sbjct: 687 LVPLHDRRPEKLHYIGVSFGLTLDLFRFWRKHNFAPFYVSQIPSAVTGEHTCMLLKPLKN 746

Query: 302 DDFEVSGSDEWGFFGPFYQAFRLRFSRLLESCFRAMEYKLAMSVLAPKINYADTDTKATS 361
           D+ EV+ SDE GFF PFY+ F++RFS+LL   F+ M+YKLAMSVL PKIN+A+ D+  +S
Sbjct: 747 DELEVNESDELGFFTPFYKDFKIRFSKLLSDKFKKMDYKLAMSVLNPKINFAEVDSSGSS 806

Query: 362 STPEGFWKSLSFEITADDMQRLKAYTDNLADYRLILDSVSVLARLYFRGKLPVTLSYVQA 421
           S   GF K+L+  ++  DM+RL+AYT+NL D+ L+ D    LA  YF  KLPV+LSYVQA
Sbjct: 807 SG--GFLKTLNGILSPYDMERLRAYTENLTDFNLVYDICKTLAHQYFEEKLPVSLSYVQA 864

Query: 422 SILLCIGLQKQDFTYIEGQLKLERTQILSLFMKAMRRFHKYLYGIASDEIQSTLPQLKER 481
           SILLC+GLQ+ DF+ IE Q++LER QI SL +K  R  +KYL G+A  EI+S LP+LKER
Sbjct: 865 SILLCLGLQETDFSSIERQMQLERGQIHSLLLKVARELYKYLNGVAGKEIKSALPRLKER 924

Query: 482 VLEPLKISVEDDLNEAAKQVEDEMKT-KTEALNPELLQQYAIVDRDGD 528
            L    +SV+DD+ E AKQVE++MK  K E L    LQQY I D++ +
Sbjct: 925 ELTAHNVSVDDDIREGAKQVEEQMKKEKIEGLMDSELQQYVIGDKEAE 972