Jatropha Genome Database
- JcCB0019791.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0019791.10 + phase: 0
(431 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 447 e-126
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 434 e-122
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 429 e-120
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 348 5e-96
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 331 5e-91
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 316 2e-86
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 238 8e-63
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 237 1e-62
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 235 4e-62
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 233 2e-61
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 231 6e-61
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 231 8e-61
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 229 3e-60
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 229 3e-60
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 227 9e-60
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 226 2e-59
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 226 2e-59
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 226 3e-59
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 224 1e-58
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 211 1e-54
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 201 8e-52
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 84 1e-16
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 81 2e-15
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 81 2e-15
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 80 3e-15
AT3G48550.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 1e-13
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 66 6e-11
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 65 6e-11
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 64 2e-10
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 63 3e-10
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 63 5e-10
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 58 1e-08
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 447 bits (1149), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/424 (57%), Positives = 276/424 (65%), Gaps = 41/424 (9%)
Query: 29 NGLTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 88
N T KRKR+PAGTPDPDAEVVSLSPRTLLESDRY+CEICNQGFQRDQNLQMHRRRHKVP
Sbjct: 39 NTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVP 98
Query: 89 WKLLKRETQ-EVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK 147
WKLLKR+ EVKKRVYVCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQWVCE+CSK
Sbjct: 99 WKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSK 158
Query: 148 GYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRRTQPE-------LQAL 200
GYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C+ RR E +
Sbjct: 159 GYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPPRPPQTAVTV 218
Query: 201 QXXXXXXXXXXXXXXXDANFSIT-------PLQGLPIPKPSDQPVFLXXXXXXXXXXXXX 253
+ N+ T PL+G PI + +
Sbjct: 219 PACSSRTASTVSTPSSETNYGGTVAVTTPQPLEGRPIHQRISSSILTNSSNNLNLELQLL 278
Query: 254 XXXXXXXXXXXXPSSTTRMLQNPDQERY----PTNLKLSIGSSDRTIEKNNDGNKEKNMA 309
+ + ++ P TNL LSI S NN
Sbjct: 279 PLSSNQNPNQ---ENQQQKVKEPSHHHNHNHDTTNLNLSIAPSSSYQHYNNFD------- 328
Query: 310 NDSTGEEAARLKEI-ANEQ-MKLAMAEKAYAEEARQQAKRQLEMAELEFANAKRIRQQSQ 367
R+KEI A+EQ MK+AM EKAYAEEA+++AKRQ E+AE EFANAK+IRQ++Q
Sbjct: 329 ---------RIKEIMASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQ 379
Query: 368 AELEKAQVLREQATKKISSTIMQITCQACKQHFXXXXXXXXXXXDETSLAMSYMSSATTE 427
AELE+A+ L+EQ+ KKISSTIMQ+TCQ CK F DETSL +SYMSSA T+
Sbjct: 380 AELERAKFLKEQSMKKISSTIMQVTCQTCKGQF-QAVAVPAATADETSLVVSYMSSANTD 438
Query: 428 GEGE 431
GE E
Sbjct: 439 GELE 442
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/425 (56%), Positives = 273/425 (64%), Gaps = 42/425 (9%)
Query: 29 NGLTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 88
N T KRKR+PAGTPDPDAEVVSLSPRTLLESDRY+CEICNQGFQRDQNLQMHRRRHKVP
Sbjct: 39 NTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVP 98
Query: 89 WKLLKRETQ-EVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSK 147
WKLLKR+ EVKKRVYVCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQWVCE+CSK
Sbjct: 99 WKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSK 158
Query: 148 GYAVQSDYKAHLKTCGTRGHSCDCGRVFS-RVESFIEHQDACTVRRTQPE-------LQA 199
GYAVQSDYKAHLKTCGTRGHSCDCG S RVESFIEHQD C+ RR E
Sbjct: 159 GYAVQSDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSARRVHREPPRPPQTAVT 218
Query: 200 LQXXXXXXXXXXXXXXXDANFSIT-------PLQGLPIPKPSDQPVFLXXXXXXXXXXXX 252
+ + N+ T PL+G PI + +
Sbjct: 219 VPACSSRTASTVSTPSSETNYGGTVAVTTPQPLEGRPIHQRISSSILTNSSNNLNLELQL 278
Query: 253 XXXXXXXXXXXXXPSSTTRMLQNPDQERY----PTNLKLSIGSSDRTIEKNNDGNKEKNM 308
+ + ++ P TNL LSI S NN
Sbjct: 279 LPLSSNQNPNQ---ENQQQKVKEPSHHHNHNHDTTNLNLSIAPSSSYQHYNNFD------ 329
Query: 309 ANDSTGEEAARLKEI-ANEQ-MKLAMAEKAYAEEARQQAKRQLEMAELEFANAKRIRQQS 366
R+KEI A+EQ MK+AM EKAYAEEA+++AKRQ E+AE EFANAK+IRQ++
Sbjct: 330 ----------RIKEIMASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKA 379
Query: 367 QAELEKAQVLREQATKKISSTIMQITCQACKQHFXXXXXXXXXXXDETSLAMSYMSSATT 426
QAELE+A+ L+EQ+ KKISSTIMQ+TCQ CK F DETSL +SYMSSA T
Sbjct: 380 QAELERAKFLKEQSMKKISSTIMQVTCQTCKGQF-QAVAVPAATADETSLVVSYMSSANT 438
Query: 427 EGEGE 431
+GE E
Sbjct: 439 DGELE 443
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/418 (55%), Positives = 275/418 (65%), Gaps = 61/418 (14%)
Query: 30 GLTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 89
+T KRKR+PAGTPDP+AEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW
Sbjct: 37 AVTQKRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 96
Query: 90 KLLKRET-QEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKG 148
KLLKRET +EV+KRVYVCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHKQW+CE+CSKG
Sbjct: 97 KLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKG 156
Query: 149 YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRRTQPELQAL-----QXX 203
YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD CTVRR+QP L
Sbjct: 157 YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRSQPSNHRLHEQQQHTT 216
Query: 204 XXXXXXXXXXXXXDANFSITP-LQGLPI-----PKPSDQPVFLXXXXXXXXXXXXXXXXX 257
+ + SI P L G P+ P QP L
Sbjct: 217 NATQTASTAENNENGDLSIGPILPGHPLQRRQSPPSEQQPSTL----------LYPFVTN 266
Query: 258 XXXXXXXXPSSTTRMLQNPDQERYPTNLKLSIGSSDRTIEKNNDGNKEKNMANDSTGEEA 317
PS +N E T+L LSIG+ D +K M+
Sbjct: 267 GSIELQLLPS------RNCADE---TSLSLSIGTMD-----------QKTMSE------- 299
Query: 318 ARLKEIANEQMKLAMAEKAYAEEARQQAKRQLEMAELEFANAKRIRQQSQAELEKAQVLR 377
+++ + E+ + ++ EEAR++ KRQ+E+AELEFA AKRIRQ ++AEL KA + R
Sbjct: 300 --VEKKSYEKGETSLER----EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFR 353
Query: 378 EQATKKISSTIMQITCQACKQHFXXXXXXXXX------XXDETSLAMSYMSSATTEGE 429
E+A+++IS+T+MQITC CKQHF + TSLA+SYMSSATTEGE
Sbjct: 354 EEASRRISATMMQITCHNCKQHFQAPAALVPPPPQTHCTDESTSLAVSYMSSATTEGE 411
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 348 bits (892), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 228/373 (61%), Gaps = 41/373 (10%)
Query: 80 MHRRRHKVPWKLLKRETQ-EVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK 138
MHRRRHKVPWKLLKR+ EVKKRVYVCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHK
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 139 QWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRRTQPE-- 196
QWVCE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD C+ RR E
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPP 120
Query: 197 -----LQALQXXXXXXXXXXXXXXXDANFSIT-------PLQGLPIPKPSDQPVFLXXXX 244
+ + N+ T PL+G PI + +
Sbjct: 121 RPPQTAVTVPACSSRTASTVSTPSSETNYGGTVAVTTPQPLEGRPIHQRISSSILTNSSN 180
Query: 245 XXXXXXXXXXXXXXXXXXXXXPSSTTRMLQNPDQERY----PTNLKLSIGSSDRTIEKNN 300
+ + ++ P TNL LSI S NN
Sbjct: 181 NLNLELQLLPLSSNQNPNQ---ENQQQKVKEPSHHHNHNHDTTNLNLSIAPSSSYQHYNN 237
Query: 301 DGNKEKNMANDSTGEEAARLKEI-ANEQ-MKLAMAEKAYAEEARQQAKRQLEMAELEFAN 358
R+KEI A+EQ MK+AM EKAYAEEA+++AKRQ E+AE EFAN
Sbjct: 238 FD----------------RIKEIMASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFAN 281
Query: 359 AKRIRQQSQAELEKAQVLREQATKKISSTIMQITCQACKQHFXXXXXXXXXXXDETSLAM 418
AK+IRQ++QAELE+A+ L+EQ+ KKISSTIMQ+TCQ CK F DETSL +
Sbjct: 282 AKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQF-QAVAVPAATADETSLVV 340
Query: 419 SYMSSATTEGEGE 431
SYMSSA T+GE E
Sbjct: 341 SYMSSANTDGELE 353
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 331 bits (849), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 189/368 (51%), Positives = 227/368 (61%), Gaps = 61/368 (16%)
Query: 80 MHRRRHKVPWKLLKRET-QEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHK 138
MHRRRHKVPWKLLKRET +EV+KRVYVCPEP+CLHH+PCHALGDLVGIKKHFRRKHSNHK
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 139 QWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRRTQPELQ 198
QW+CE+CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD CTVRR+QP
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTCTVRRSQPSNH 120
Query: 199 ALQXXXXXXXXXXXXXXX-----DANFSITP-LQGLPI-----PKPSDQPVFLXXXXXXX 247
L + + SI P L G P+ P QP L
Sbjct: 121 RLHEQQQHTTNATQTASTAENNENGDLSIGPILPGHPLQRRQSPPSEQQPSTL------- 173
Query: 248 XXXXXXXXXXXXXXXXXXPSSTTRMLQNPDQERYPTNLKLSIGSSDRTIEKNNDGNKEKN 307
PS +N E T+L LSIG+ D +K
Sbjct: 174 ---LYPFVTNGSIELQLLPS------RNCADE---TSLSLSIGTMD-----------QKT 210
Query: 308 MANDSTGEEAARLKEIANEQMKLAMAEKAYAEEARQQAKRQLEMAELEFANAKRIRQQSQ 367
M+ +++ + E+ + ++ EEAR++ KRQ+E+AELEFA AKRIRQ ++
Sbjct: 211 MSE---------VEKKSYEKGETSLER----EEARRETKRQIEIAELEFAEAKRIRQHAR 257
Query: 368 AELEKAQVLREQATKKISSTIMQITCQACKQHFXXXXXXXXX------XXDETSLAMSYM 421
AEL KA + RE+A+++IS+T+MQITC CKQHF + TSLA+SYM
Sbjct: 258 AELHKAHLFREEASRRISATMMQITCHNCKQHFQAPAALVPPPPQTHCTDESTSLAVSYM 317
Query: 422 SSATTEGE 429
SSATTEGE
Sbjct: 318 SSATTEGE 325
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 140/154 (90%), Positives = 148/154 (96%), Gaps = 2/154 (1%)
Query: 44 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRET--QEVKK 101
DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR+ +EV+K
Sbjct: 20 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79
Query: 102 RVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKT 161
RVYVCPEP+CLHHDPCHALGDLVGIKKHFRRKHS HKQWVCE+CSKGYAVQSDYKAHLKT
Sbjct: 80 RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139
Query: 162 CGTRGHSCDCGRVFSRVESFIEHQDACTVRRTQP 195
CG+RGHSCDCGRVFSRVESFIEHQD CT+R+ QP
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTCTIRQPQP 173
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 21/147 (14%)
Query: 285 LKLSIGSSDRTIEKNNDGNKEKNMANDSTGEEAARLKEIANEQMKLAMAEKAYAEEARQQ 344
L+LSIG + + + ++ +E ++ + EEA + AEE RQ+
Sbjct: 237 LQLSIGMARTSAQARHNEKRETSLTKERANEEARK------------------AEETRQE 278
Query: 345 AKRQLEMAELEFANAKRIRQQSQAELEKAQVLREQATKKISSTIMQITCQACKQHFXXXX 404
AKRQ+EMAE +F AKRIR++++ ELEKA V+RE+A K+I++T+M+ITC +CKQ F
Sbjct: 279 AKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITCHSCKQLFQLPV 338
Query: 405 XXXXXXXDETSLAMSYMSSATTEGEGE 431
+SL MSY+SSATTEGE E
Sbjct: 339 TADEST---SSLVMSYVSSATTEGECE 362
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 125/157 (79%), Gaps = 1/157 (0%)
Query: 32 TNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL 91
K+KR G PDPDAEV++LSP+TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL
Sbjct: 30 VGKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 89
Query: 92 LKRETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAV 151
+R T+EV+K+VYVCP C+HHDP ALGDL GIKKHF RKH K+W CEKCSK YAV
Sbjct: 90 RQRSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCEKCSKKYAV 148
Query: 152 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
QSD+KAH K CGT+ + CDCG +FSR +SFI H+ C
Sbjct: 149 QSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFC 185
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
Query: 32 TNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL 91
T K+KR G PDP++EV++LSP+TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL
Sbjct: 32 TGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 91
Query: 92 LKRETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAV 151
++ +EVKK+VYVCPE SC+HHDP ALGDL GIKKHF RKH K+W C+KCSK YAV
Sbjct: 92 RQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAV 150
Query: 152 QSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
QSD+KAH K CGT+ + CDCG +FSR +SFI H+ C
Sbjct: 151 QSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFC 187
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K++R G P+PDAEVV+LSP+TL+ ++R++C++CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 54 KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQ 113
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
+ T+EVK++VY+CPEP+C+HHDP ALGDL GIKKH+ RKH K+W CEKCSK YAVQS
Sbjct: 114 KSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHG-EKKWKCEKCSKRYAVQS 172
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGT+ + CDCG +FSR +S+I H+ C
Sbjct: 173 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFC 207
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 101/155 (65%), Positives = 126/155 (81%), Gaps = 1/155 (0%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR G PDP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
R ++EV+KRVYVCPE SC+HH P ALGDL GIKKHF RKH K+W CEKC+K YAVQS
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHG-EKKWKCEKCAKRYAVQS 159
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 194
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 125/156 (80%), Gaps = 2/156 (1%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR GTPDPDA+V++LSP TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 94 RETQEV-KKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 152
R QEV KK+VY+CP +C+HHD ALGDL GIKKH+ RKH K+W CEKCSK YAVQ
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGE-KKWKCEKCSKKYAVQ 171
Query: 153 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
SD+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 172 SDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFC 207
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 128/155 (82%), Gaps = 1/155 (0%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR TP+ DAEV++LSP+TL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 52 KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 111
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
+ T+EVK++VY+CPEPSC+HHDP ALGDL GIKKH+ RKH K+W C+KCSK YAVQS
Sbjct: 112 KSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHG-EKKWKCDKCSKRYAVQS 170
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGT+ + CDCG +FSR +SFI H+ C
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFC 205
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 128/155 (82%), Gaps = 1/155 (0%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K++R G P+PDAEV++LSP+T++ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 53 KKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 112
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
+ +EV+++VY+CPEPSC+HHDP ALGDL GIKKH+ RKH K+W C+KCSK YAVQS
Sbjct: 113 KSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHG-EKKWKCDKCSKRYAVQS 171
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGT+ + CDCG +FSR +S+I H+ C
Sbjct: 172 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFC 206
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
KRKR G PDP+AEV++LSP+TL+ ++R++CE+CN+GFQRDQNLQ+H+R H +PWKL +
Sbjct: 63 KRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQ 122
Query: 94 RETQE-VKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 152
R ++ V+K+VYVCPEP C+HH P ALGDL GIKKHF RKH K+W CEKCSK YAVQ
Sbjct: 123 RSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGE-KKWKCEKCSKKYAVQ 181
Query: 153 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
SD+KAH KTCGT+ + CDCG +FSR +SFI H+ C
Sbjct: 182 SDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFC 217
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 101/158 (63%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
Query: 32 TNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKL 91
T K++R G PDP++EV++LSP+TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL
Sbjct: 68 TQKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 127
Query: 92 LKRETQEV-KKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA 150
+R +EV +K+VYVCPE SC+HHDP ALGDL GIKKHF RKH K+W C+KCSK YA
Sbjct: 128 KQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGE-KKWKCDKCSKKYA 186
Query: 151 VQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
VQSD KAH KTCGT+ + CDCG +FSR +SFI H+ C
Sbjct: 187 VQSDCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFC 224
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 124/156 (79%), Gaps = 2/156 (1%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR G PDPDAEV++LSP+TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 94 RETQE-VKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 152
+ T+E KK+VYVCPE +C HH P ALGDL GIKKHF RKH K+W CEKCSK YAVQ
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKFYAVQ 171
Query: 153 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
SD+KAH K CGTR + CDCG +FSR ++FI H+ C
Sbjct: 172 SDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFC 207
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 124/155 (80%), Gaps = 1/155 (0%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR G PDP+AEV++LSP TL+ ++R++CE+C +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
R ++EV+KRVYVCPE +C+HH ALGDL GIKKHF RKH K+W CEKC+K YAVQS
Sbjct: 97 RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHG-EKKWTCEKCAKRYAVQS 155
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 190
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 124/156 (79%), Gaps = 2/156 (1%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
KRKR G PDPDAEV++LSP +L+ ++R++CE+CN+GF+RDQNLQ+HRR H +PWKL +
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 94 RETQE-VKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQ 152
R +E VKK+VY+CPE +C+HHDP ALGDL GIKKHF RKH K+W C+KCSK YAV
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHG-EKKWKCDKCSKKYAVM 157
Query: 153 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
SD+KAH K CGT+ + CDCG +FSR +SFI H+ C
Sbjct: 158 SDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFC 193
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 125/155 (80%), Gaps = 3/155 (1%)
Query: 34 KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 93
K+KR G +P+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 41 KKKRNLPG--NPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 98
Query: 94 RETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQS 153
R ++EV+KRVYVCPE SC+HH P ALGDL GIKKHF RKH K+W CEKC+K YAVQS
Sbjct: 99 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHG-EKKWKCEKCAKRYAVQS 157
Query: 154 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 188
D+KAH KTCGTR + CDCG +FSR +SFI H+ C
Sbjct: 158 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFC 192
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 117/147 (79%), Gaps = 2/147 (1%)
Query: 45 PDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQ-EVKKRV 103
P+AEV+SLSP++L+ ++R+ CEICN+GFQR+QNLQ+H+R H +PWKL ++ + +VKK+V
Sbjct: 46 PNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKV 105
Query: 104 YVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCG 163
Y+CPE SC+HHDP ALGDL GIKKHF RKH K+W C+KCSK YAV SD+KAH K CG
Sbjct: 106 YICPEKSCVHHDPARALGDLTGIKKHFSRKHG-EKKWKCDKCSKKYAVISDWKAHNKICG 164
Query: 164 TRGHSCDCGRVFSRVESFIEHQDACTV 190
+R CDCG +FSR +SFI H+ C V
Sbjct: 165 SREFRCDCGTLFSRKDSFISHRSFCDV 191
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
Query: 58 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPC 117
+ ++R++C++CN+GFQR+QNLQ+HRR H +PWKL ++ T+EVK++VY+CPEP+C+HHDP
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 118 HALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 177
ALGDL GIKKH+ RKH K+W CEKCSK YAVQSD+KAH KTCGT+ + CDCG +FSR
Sbjct: 61 RALGDLTGIKKHYYRKHG-EKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 119
Query: 178 VESFIEHQDAC 188
+S+I H+ C
Sbjct: 120 RDSYITHRAFC 130
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 20/167 (11%)
Query: 33 NKRKRKPA-GTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK- 90
+K + KP+ G+ D ++ L LL + C+IC +GF+RD NL+MH R H +K
Sbjct: 190 DKHRSKPSSGSYD----ILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKT 245
Query: 91 ---LLKRETQE------VKKRVYVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHK 138
L+ +Q+ +KK Y CP+ C H+ L ++ K H++R H K
Sbjct: 246 REALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCP-K 304
Query: 139 QWVCEKCS-KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 184
++C +CS K ++V SD + H K CG C CG FSR + + H
Sbjct: 305 MYMCRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSH 351
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 43 PDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKR 102
P E++ L +L + C IC +GF+RD NL+MH R H +K + K+
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 103 V----------YVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC-SKG 148
V Y CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTKK 342
Query: 149 YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 184
++V +D K H K CG C CG FSR + H
Sbjct: 343 FSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGH 378
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 43 PDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKR 102
P E++ L +L + C IC +GF+RD NL+MH R H +K + K+
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 103 V----------YVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC-SKG 148
V Y CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTKK 342
Query: 149 YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 184
++V +D K H K CG C CG FSR + H
Sbjct: 343 FSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGH 378
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 43 PDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKR 102
P E++ L +L + C IC +GF+RD NL+MH R H +K + K+
Sbjct: 75 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 134
Query: 103 V----------YVCPEPSCL---HHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC-SKG 148
V Y CP C H L ++ +K H++R H + K + C +C +K
Sbjct: 135 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD-KSFTCSRCHTKK 193
Query: 149 YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 184
++V +D K H K CG C CG FSR + H
Sbjct: 194 FSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGH 229
>AT3G48550.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: nucleic acid
binding / transcription factor/ zinc ion binding
(TAIR:AT2G01940.3); Has 40 Blast hits to 40 proteins in
6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr3:17994048-17994595 FORWARD
Length = 158
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 59/81 (72%)
Query: 320 LKEIANEQMKLAMAEKAYAEEARQQAKRQLEMAELEFANAKRIRQQSQAELEKAQVLREQ 379
LK A EQ++LA EKAYAE R+ +R++EMA+ EFA A+ + Q+++ E+E+A+ L+E+
Sbjct: 76 LKWQAAEQIRLAAIEKAYAERVRELTRREMEMAQSEFARARVMWQKAREEVERAERLKER 135
Query: 380 ATKKISSTIMQITCQACKQHF 400
+ KI + ++ITC +C+Q F
Sbjct: 136 SMTKIDTACLEITCHSCRQRF 156
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 55 RTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRETQEVKKRVYVCPEP 109
+ L+ ++ C +C + F R N+QMH H K P L + + + C P
Sbjct: 209 QILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAP 268
Query: 110 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRG 166
C + H L D ++ H++RKH K ++C KC K +AV+ D++ H K CG
Sbjct: 269 GCRNNIDHPRAKPLKDFRTLQTHYKRKHGI-KPFMCRKCGKAFAVRGDWRTHEKNCGKLW 327
Query: 167 HSCDCGRVFSRVESFIEHQDA 187
+ C CG F S +H A
Sbjct: 328 Y-CICGSDFKHKRSLKDHIKA 347
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 55 RTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRETQEVKKRVYVCPEP 109
+ L+ ++ C +C + F R N+QMH H K P L + + + C P
Sbjct: 170 QILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAP 229
Query: 110 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRG 166
C + H L D ++ H++RKH + K + C C K +AV+ D++ H K CG
Sbjct: 230 GCKNNIDHPRAKPLKDFRTLQTHYKRKHGS-KPFACRMCGKAFAVKGDWRTHEKNCGKLW 288
Query: 167 HSCDCGRVFSRVESFIEHQDA 187
+ C CG F S +H A
Sbjct: 289 Y-CSCGSDFKHKRSLKDHVKA 308
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 30 GLTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPW 89
G+ N+ K P P+ ++ + + C +C + F R NLQMH H +
Sbjct: 120 GIENELSGKAYWIPAPEQILIGFT--------HFSCHVCFKTFNRYNNLQMHMWGHGSQY 171
Query: 90 KLLKRETQEVKKRV------YVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQW 140
+ + + R Y C E C + H L D ++ H++RKH HK +
Sbjct: 172 RKGPESLKGTQPRAMLGIPCYCCVE-GCRNHIDHPRSKPLKDFRTLQTHYKRKHG-HKPF 229
Query: 141 VCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDA 187
C C K AV+ D++ H K CG R C CG F S +H A
Sbjct: 230 SCRLCGKLLAVKGDWRTHEKNCGKRW-VCVCGSDFKHKRSLKDHVKA 275
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 55 RTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRETQEVKKRVYVCPEP 109
+ L+ ++ C +C + F R N+QMH H K P L + + K C P
Sbjct: 248 QILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAP 307
Query: 110 SC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRG 166
C + H L D ++ H++RKH + + C +C K +AV+ D++ H K CG
Sbjct: 308 GCKNNIDHPRARPLKDFRTLQTHYKRKHGV-RPFACRRCGKAFAVKGDWRTHEKNCGKLW 366
Query: 167 HSCDCGRVFSRVESFIEHQDA 187
+ C CG F S +H A
Sbjct: 367 Y-CSCGSDFKHKRSLKDHVKA 386
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 62 RYVCEICNQGFQRDQNLQMHRRRHKVPWK----LLKRETQE---VKKRVYVCPEPSC--- 111
++ C IC++ F R N+QMH H ++ LK Q ++ Y C E C
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAE-GCKNN 237
Query: 112 LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDC 171
++H L D ++ H++RKH + K + C KC K AV+ D++ H K CG + C C
Sbjct: 238 INHPRSKPLKDFRTLQTHYKRKHGS-KPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTC 295
Query: 172 GRVFSRVESFIEH 184
G F S +H
Sbjct: 296 GSDFKHKRSLKDH 308
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 49 VVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRH-----KVPWKL--LKRETQEVKK 101
+ SLS + L+ ++ C +CN+ F R N+QMH H K P L K + ++
Sbjct: 88 IPSLS-QILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRL 146
Query: 102 RVYVCPEPSC---LHHDPCHALGDLVGIKKHFRRKHSNHKQWVC-EKCSKGYAVQSDYKA 157
Y C E C + H L D ++ H++RKH K + C +KC K +AV+ D++
Sbjct: 147 PCYCCAE-GCKNNIDHPRSKPLKDFRTLQTHYKRKHGA-KPFRCRKKCEKTFAVRGDWRT 204
Query: 158 HLKTCGTRGHSCDCGRVFSRVESFIEHQDA 187
H K CG + C CG F S +H A
Sbjct: 205 HEKNCG-KLWFCVCGSDFKHKRSLKDHVRA 233