Jatropha Genome Database
- JcCB0018541.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0018541.10 + phase: 1 /partial
(178 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G46370.2 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT ... 229 5e-61
AT2G46370.1 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT ... 229 5e-61
AT2G46370.3 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT ... 229 7e-61
AT4G03400.1 | Symbols: DFL2, GH3-10 | DFL2 (DWARF IN LIGHT 2) | ... 176 5e-45
AT1G59500.1 | Symbols: GH3.4 | GH3.4; indole-3-acetic acid amido... 147 3e-36
AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | BRU6; in... 139 7e-34
AT5G13380.1 | Symbols: | auxin-responsive GH3 family protein | ... 137 4e-33
AT1G23160.1 | Symbols: | auxin-responsive GH3 family protein | ... 137 5e-33
AT2G23170.1 | Symbols: GH3.3 | GH3.3; indole-3-acetic acid amido... 136 8e-33
AT5G13360.2 | Symbols: | auxin-responsive GH3 family protein | ... 135 1e-32
AT5G13360.1 | Symbols: | auxin-responsive GH3 family protein | ... 135 1e-32
AT2G14960.1 | Symbols: GH3.1 | GH3.1 | chr2:6451659-6453670 REVERSE 134 4e-32
AT5G13370.1 | Symbols: | auxin-responsive GH3 family protein | ... 133 8e-32
AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | PBS3 (AVRPPHB ... 128 2e-30
AT5G54510.1 | Symbols: GH3.6, DFL1 | DFL1 (DWARF IN LIGHT 1); in... 127 3e-30
AT1G28130.1 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid ami... 124 2e-29
AT4G27260.1 | Symbols: GH3.5, WES1 | WES1; indole-3-acetic acid ... 124 2e-29
AT1G28130.2 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid ami... 124 4e-29
AT2G47750.1 | Symbols: GH3.9 | GH3.9 (PUTATIVE INDOLE-3-ACETIC A... 122 2e-28
AT5G13350.1 | Symbols: | auxin-responsive GH3 family protein | ... 121 2e-28
AT1G48660.1 | Symbols: | auxin-responsive GH3 family protein | ... 119 7e-28
AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein | ... 119 1e-27
AT5G51470.1 | Symbols: | auxin-responsive GH3 family protein | ... 119 1e-27
>AT2G46370.2 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT 1);
ATP binding / adenylyltransferase/ catalytic/
jasmonate-amino synthetase | chr2:19034342-19036369
FORWARD
Length = 575
Score = 229 bits (585), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDVVK++GF+N+TP+LKF+CR +L+L+INIDKN+E+DL L+V+ I
Sbjct: 398 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKI 457
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIGP 120
EV+DFSS +D+ST+PGHY IFWEI+ E +++L++CCNCLDR+F+DAGYVSSRK IG
Sbjct: 458 EVIDFSSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGYVSSRKCKTIGA 517
Query: 121 LELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPTXXXXXXXXXXXXXXXFFSNAF 178
LELRVV +GTF+KI +H+LGLG+ QFK PRCV P+ +FS AF
Sbjct: 518 LELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNAKVLQILCENVVSSYFSTAF 575
>AT2G46370.1 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT 1);
ATP binding / adenylyltransferase/ catalytic/
jasmonate-amino synthetase | chr2:19034342-19036369
FORWARD
Length = 575
Score = 229 bits (585), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDVVK++GF+N+TP+LKF+CR +L+L+INIDKN+E+DL L+V+ I
Sbjct: 398 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKI 457
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIGP 120
EV+DFSS +D+ST+PGHY IFWEI+ E +++L++CCNCLDR+F+DAGYVSSRK IG
Sbjct: 458 EVIDFSSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGYVSSRKCKTIGA 517
Query: 121 LELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPTXXXXXXXXXXXXXXXFFSNAF 178
LELRVV +GTF+KI +H+LGLG+ QFK PRCV P+ +FS AF
Sbjct: 518 LELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNAKVLQILCENVVSSYFSTAF 575
>AT2G46370.3 | Symbols: JAR1, FIN219 | JAR1 (JASMONATE RESISTANT 1);
ATP binding / adenylyltransferase/ catalytic/
jasmonate-amino synthetase | chr2:19034579-19036369
FORWARD
Length = 496
Score = 229 bits (584), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDVVK++GF+N+TP+LKF+CR +L+L+INIDKN+E+DL L+V+ I
Sbjct: 319 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKI 378
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIGP 120
EV+DFSS +D+ST+PGHY IFWEI+ E +++L++CCNCLDR+F+DAGYVSSRK IG
Sbjct: 379 EVIDFSSYIDVSTDPGHYAIFWEISGETNEDVLQDCCNCLDRAFIDAGYVSSRKCKTIGA 438
Query: 121 LELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPTXXXXXXXXXXXXXXXFFSNAF 178
LELRVV +GTF+KI +H+LGLG+ QFK PRCV P+ +FS AF
Sbjct: 439 LELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVKPSNAKVLQILCENVVSSYFSTAF 496
>AT4G03400.1 | Symbols: DFL2, GH3-10 | DFL2 (DWARF IN LIGHT 2) |
chr4:1497675-1499729 REVERSE
Length = 591
Score = 176 bits (447), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXX-XXXXX 59
LYRYRLGDVV++ FH TP+L F+ R L+LTINIDKN+EKDL VD
Sbjct: 414 LYRYRLGDVVEVTSFHKGTPKLSFIYRRKLILTINIDKNTEKDLQRVVDKASQLLSRSTR 473
Query: 60 IEVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILKECCNCLDRSFLDAGYVSSRKINAIG 119
EVVDF+S D+ PGHYVI+WEI E D+ L+ECC +D +F+D GYV SR++N+IG
Sbjct: 474 AEVVDFTSHADVIARPGHYVIYWEIRGEADDKALEECCREMDTAFVDYGYVVSRRMNSIG 533
Query: 120 PLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
PLELRVV RGTF K+ + +G ++QFKTPRC
Sbjct: 534 PLELRVVERGTFGKVAERCVGKCGGLNQFKTPRCT 568
>AT1G59500.1 | Symbols: GH3.4 | GH3.4; indole-3-acetic acid amido
synthetase | chr1:21854493-21856614 REVERSE
Length = 597
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GD++++ GFHNS P+ KF+ R ++LL+I DK E DL AV+
Sbjct: 407 LYRYRVGDILRVTGFHNSAPQFKFIRRENVLLSIESDKTDEADLQKAVENASRLLAEQGT 466
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEI------NKEPTDEILKECCNCLDRSFLDAGYVSSR- 113
V++++S D T PGHYVI+WE+ N P+DE++ +CC ++ S L+A Y SR
Sbjct: 467 RVIEYTSYADTKTIPGHYVIYWELLSRDQSNALPSDEVMAKCCLEMEES-LNAVYRQSRV 525
Query: 114 KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPT 157
+IGPLE+RVV+ GTF++++D + G+ ++Q+K PRCV+ T
Sbjct: 526 SDKSIGPLEIRVVQNGTFEELMDFSISRGSSINQYKVPRCVSLT 569
>AT4G37390.1 | Symbols: YDK1, GH3.2, BRU6, GH3-2, AUR3 | BRU6;
indole-3-acetic acid amido synthetase |
chr4:17579722-17581768 FORWARD
Length = 603
Score = 139 bits (351), Expect = 7e-34, Method: Composition-based stats.
Identities = 65/164 (39%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GD++++ GFHNS P+ KF+ R ++LL++ DK E +L AV+
Sbjct: 413 LYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSVESDKTDEAELQKAVENASRLFAEQGT 472
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEI------NKEPTDEILKECCNCLDRSFLDAGYVSSRK 114
V++++S + T PGHYVI+WE+ N ++E++ +CC ++ S L++ Y SR
Sbjct: 473 RVIEYTSYAETKTIPGHYVIYWELLGRDQSNALMSEEVMAKCCLEMEES-LNSVYRQSRV 531
Query: 115 IN-AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPT 157
+ +IGPLE+RVVR GTF++++D+ + G ++Q+K PRCV+ T
Sbjct: 532 ADKSIGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCVSFT 575
>AT5G13380.1 | Symbols: | auxin-responsive GH3 family protein |
chr5:4289912-4292355 FORWARD
Length = 624
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 9/163 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDV+++ GFHN+ P+ FV R +++L+I++ K E+DL AV +
Sbjct: 430 LYRYRLGDVLRVTGFHNNAPQFYFVGRQNVVLSIDLSKTYEEDLLKAVKNASLLLEPHDL 489
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK-------EPTDEILKECCNCLDRSFLDAGYVSSR 113
++DF+S VDLS+ PGHYV++WE+ +P +L+ECC ++ S LD+ Y R
Sbjct: 490 MLMDFTSRVDLSSLPGHYVLYWELGNKFKNAKLDPKSNVLEECCLTVEES-LDSIYREGR 548
Query: 114 KINA-IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
K + IGPLE++VV+ G F ++++ +L G+ VSQ+KTPR V
Sbjct: 549 KNDKIIGPLEIKVVKPGAFDELMNFFLSRGSSVSQYKTPRSVT 591
>AT1G23160.1 | Symbols: | auxin-responsive GH3 family protein |
chr1:8209232-8211325 FORWARD
Length = 578
Score = 137 bits (344), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 104/166 (62%), Gaps = 13/166 (7%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYR R+GD++ + GFHN P+ +F+ R +++L+I++DK +E DL AV+ +
Sbjct: 394 LYRIRVGDILVVTGFHNKAPQFRFIRRDNVVLSIDLDKTNEDDLFKAVNNAKLTLDSSHL 453
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTD-----------EILKECCNCLDRSFLDAGY 109
++DF+S D+ST PGHYV++WE+ + D E ECC ++ S LD+ Y
Sbjct: 454 MLIDFTSYADISTIPGHYVVYWEVKNKNEDKKSKKHIELKEETFSECCLLMEDS-LDSVY 512
Query: 110 VSSR-KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
R K ++GPLE++VVR+GTF ++D+++ G + Q+KTPRC+
Sbjct: 513 KICRFKEESVGPLEIKVVRQGTFDSLMDYFISQGASIGQYKTPRCI 558
>AT2G23170.1 | Symbols: GH3.3 | GH3.3; indole-3-acetic acid amido
synthetase | chr2:9864125-9866502 REVERSE
Length = 595
Score = 136 bits (342), Expect = 8e-33, Method: Composition-based stats.
Identities = 65/163 (39%), Positives = 104/163 (63%), Gaps = 7/163 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
L RYR+GD++++ GF+NS P+ KFV R ++LL+I DK E +L AV+
Sbjct: 406 LNRYRVGDILQVTGFYNSAPQFKFVRRKNVLLSIESDKTDEAELQSAVENASLLLGEQGT 465
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEI-----NKEPTDEILKECCNCLDRSFLDAGYVSSRKI 115
V++++S + T PGHYVI+WE+ P DE++ CC ++ S L++ Y SR
Sbjct: 466 RVIEYTSYAETKTIPGHYVIYWELLVKDQTNPPNDEVMARCCLEMEES-LNSVYRQSRVA 524
Query: 116 N-AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPT 157
+ +IGPLE+RVV+ GTF++++D+ + G ++Q+K PRCV+ T
Sbjct: 525 DKSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVSFT 567
>AT5G13360.2 | Symbols: | auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD
Length = 594
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 9/163 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDV+++ GF+N+ P+ FV R ++L+I++DK ++DL AV +
Sbjct: 400 LYRYRLGDVLRVTGFYNNAPQFHFVGRQKVVLSIDMDKTYDEDLLKAVTNASLLLEPHDL 459
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTD-------EILKECCNCLDRSFLDAGYVSSR 113
++DF+S VD S+ PGHYV++WE+ ++ D +L+ECC ++ S LDA Y R
Sbjct: 460 MLMDFTSRVDSSSYPGHYVLYWELGRKVKDAKLELDQNVLEECCFTIEES-LDAVYRKGR 518
Query: 114 KINA-IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
K + IGPLE++VV+ G F K+++ +L G+ VSQ+KTPR V
Sbjct: 519 KNDKNIGPLEIKVVKPGAFDKLMNFFLSRGSSVSQYKTPRSVT 561
>AT5G13360.1 | Symbols: | auxin-responsive GH3 family protein |
chr5:4283805-4286120 FORWARD
Length = 594
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 9/163 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYRLGDV+++ GF+N+ P+ FV R ++L+I++DK ++DL AV +
Sbjct: 400 LYRYRLGDVLRVTGFYNNAPQFHFVGRQKVVLSIDMDKTYDEDLLKAVTNASLLLEPHDL 459
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTD-------EILKECCNCLDRSFLDAGYVSSR 113
++DF+S VD S+ PGHYV++WE+ ++ D +L+ECC ++ S LDA Y R
Sbjct: 460 MLMDFTSRVDSSSYPGHYVLYWELGRKVKDAKLELDQNVLEECCFTIEES-LDAVYRKGR 518
Query: 114 KINA-IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
K + IGPLE++VV+ G F K+++ +L G+ VSQ+KTPR V
Sbjct: 519 KNDKNIGPLEIKVVKPGAFDKLMNFFLSRGSSVSQYKTPRSVT 561
>AT2G14960.1 | Symbols: GH3.1 | GH3.1 | chr2:6451659-6453670 REVERSE
Length = 590
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 103/161 (63%), Gaps = 8/161 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXX-X 59
L RYR+GD++++ GFHNS P+ FV R ++LL+I+ DK E +L AV+
Sbjct: 399 LCRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQKAVENASSILHEECG 458
Query: 60 IEVVDFSSLVDLSTEPGHYVIFWEI-----NKEPTDEILKECCNCLDRSFLDAGYVSSRK 114
V +++S D ST PGHYV++WE+ ++P+ E L CC ++ S L++ Y SR
Sbjct: 459 SRVAEYTSYADTSTIPGHYVLYWELLVRDGARQPSHETLTRCCLGMEES-LNSVYRQSRV 517
Query: 115 I-NAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
N++GPLE+RVVR GTF++++D+ + G ++Q+K PRCV
Sbjct: 518 ADNSVGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCV 558
>AT5G13370.1 | Symbols: | auxin-responsive GH3 family protein |
chr5:4286996-4289424 FORWARD
Length = 595
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GDV++ GF+N+ P FV R ++L+I++DK E DL AV +
Sbjct: 401 LYRYRVGDVLRATGFYNNAPHFCFVGRQKVVLSIDMDKTYEDDLLKAVTNAKLLLEPHDL 460
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK-------EPTDEILKECCNCLDRSFLDAGYVSSR 113
++DF+S VD S+ PGHYVI+WE+ EP ++++ECC ++ S LDA Y R
Sbjct: 461 MLMDFTSRVDSSSFPGHYVIYWELGSKVKDAKFEPNRDVMEECCFTVEES-LDAVYRKGR 519
Query: 114 KINA-IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVA 155
K + IGPLE++VV+ G F ++++ +L G+ VSQ+KTPR V
Sbjct: 520 KNDKNIGPLEIKVVKPGAFDELMNFFLSRGSSVSQYKTPRSVT 562
>AT5G13320.1 | Symbols: PBS3, GDG1, WIN3, GH3.12 | PBS3 (AVRPPHB
SUSCEPTIBLE 3) | chr5:4268902-4270896 FORWARD
Length = 575
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYR R+GD+V + GF+N+ P+ KFV R +++L+I+ DK +E+DL AV +
Sbjct: 391 LYRMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLFKAVSQAKLVLESSGL 450
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK-----------EPTDEILKECCNCLDRSFLDAGY 109
++ DF+S D ST PGHYV++ E++ E +E L CC ++ S LD Y
Sbjct: 451 DLKDFTSYADTSTFPGHYVVYLEVDTKEGEEKETAQFELDEEALSTCCLVMEES-LDNVY 509
Query: 110 VSSR-KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
R K +IGPLE+RVVR+GTF ++D ++ G Q+KTPRC+
Sbjct: 510 KRCRFKDGSIGPLEIRVVRQGTFDSLMDFFISQGASTGQYKTPRCI 555
>AT5G54510.1 | Symbols: GH3.6, DFL1 | DFL1 (DWARF IN LIGHT 1);
indole-3-acetic acid amido synthetase |
chr5:22131321-22133564 REVERSE
Length = 612
Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 98/159 (61%), Gaps = 6/159 (3%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GDV+ + GF N+ P+ F+CR +++L+I+ DK E +L AV
Sbjct: 420 LYRYRVGDVLSVAGFKNNAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDA 479
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEI----NKEPTDEILKECCNCLDRSFLDAGYVSSR-KI 115
+ +++S D S+ PGHYV+FWE+ N + ++CC ++ S L++ Y R
Sbjct: 480 SLSEYTSYADTSSIPGHYVLFWELCLNGNTPIPPSVFEDCCLTIEES-LNSVYRQGRVSD 538
Query: 116 NAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
+IGPLE+++V GTF K++D+ + LG ++Q+KTPRCV
Sbjct: 539 KSIGPLEIKMVESGTFDKLMDYAISLGASINQYKTPRCV 577
>AT1G28130.1 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido
synthetase | chr1:9825431-9827883 FORWARD
Length = 609
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 23/170 (13%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXX--X 58
LYRYR+GD++K+ GFHN P+ +FV R +++L+I+ DK SE+DL AV
Sbjct: 415 LYRYRVGDILKVTGFHNKAPQFRFVQRRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQHPS 474
Query: 59 XIEVVDFSSLVDLSTEPGHYVIFWEI-----NKEPT--DEILKECC----NCLDRSFLDA 107
+ + +++S D S+ PGHYV+FWE+ N P D+ +++CC +CLD
Sbjct: 475 SLLLTEYTSYADTSSIPGHYVLFWELKPRHSNDPPKLDDKTMEDCCSEVEDCLD------ 528
Query: 108 GYVSSRKIN---AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
YV R N +IGPLE+RVV GTF ++D + G+ ++Q+KTPRCV
Sbjct: 529 -YVYRRCRNRDKSIGPLEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCV 577
>AT4G27260.1 | Symbols: GH3.5, WES1 | WES1; indole-3-acetic acid
amido synthetase | chr4:13653704-13655892 FORWARD
Length = 612
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 10/161 (6%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
L RYR+GD++++ GF N P+ F+CR +++L+I+ DK E +L AV
Sbjct: 420 LCRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDA 479
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEI----NKEPTDEILKECCNCLDRSF---LDAGYVSSR 113
+ +++S D S+ PGHYV+FWE+ N + ++CC ++ SF G VS +
Sbjct: 480 SLSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESFNTVYRQGRVSDK 539
Query: 114 KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
+IGPLE+++V GTF K++D+ + LG ++Q+KTPRCV
Sbjct: 540 ---SIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCV 577
>AT1G28130.2 | Symbols: GH3.17 | GH3.17; indole-3-acetic acid amido
synthetase | chr1:9826379-9827883 FORWARD
Length = 466
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 23/170 (13%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXX--X 58
LYRYR+GD++K+ GFHN P+ +FV R +++L+I+ DK SE+DL AV
Sbjct: 272 LYRYRVGDILKVTGFHNKAPQFRFVQRRNVVLSIDTDKTSEEDLLNAVTQAKLNHLQHPS 331
Query: 59 XIEVVDFSSLVDLSTEPGHYVIFWEI-----NKEPT--DEILKECC----NCLDRSFLDA 107
+ + +++S D S+ PGHYV+FWE+ N P D+ +++CC +CLD
Sbjct: 332 SLLLTEYTSYADTSSIPGHYVLFWELKPRHSNDPPKLDDKTMEDCCSEVEDCLD------ 385
Query: 108 GYVSSRKIN---AIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
YV R N +IGPLE+RVV GTF ++D + G+ ++Q+KTPRCV
Sbjct: 386 -YVYRRCRNRDKSIGPLEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCV 434
>AT2G47750.1 | Symbols: GH3.9 | GH3.9 (PUTATIVE INDOLE-3-ACETIC
ACID-AMIDO SYNTHETASE GH3.9) | chr2:19560307-19562974
REVERSE
Length = 585
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 7/157 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GDV+++ GF+N P+ +F+CR +++L+I++DK +E+DLH ++
Sbjct: 405 LYRYRIGDVLQVAGFYNGAPQFRFICRRNVVLSIDLDKTNEEDLHRSITLAKKKLGSNAF 464
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK--EPTDEILKECCNCLDRSFLDAGYVSSR-KINA 117
+ +++S D S+ PGHYV+FWEI EP L E C LD Y R K +
Sbjct: 465 -LAEYTSYADTSSVPGHYVLFWEIQGHLEPK---LMEECCVAVEEELDYIYRQCRTKERS 520
Query: 118 IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
IG LE+RVV+ GTF+K++D + G +Q+KTPRCV
Sbjct: 521 IGALEIRVVKPGTFEKLMDLIISQGGSFNQYKTPRCV 557
>AT5G13350.1 | Symbols: | auxin-responsive GH3 family protein |
chr5:4279884-4282287 FORWARD
Length = 587
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
LYRYR+GD++++ GF+N++P +FV R ++L++++ E+DL AV +
Sbjct: 401 LYRYRVGDLLRVTGFYNNSPHFRFVGRQKVVLSLHMANTYEEDLLKAVTNAKLLLEPHDL 460
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK-------EPTDEILKECCNCLDRSFLDAGYVSSR 113
+++F+S VD S+ GHYV++WE+ EP ++++ECC +++ +LD Y R
Sbjct: 461 MLMEFTSRVDSSSFVGHYVLYWELGSKVKDAKLEPNRDVMEECCFTVEK-YLDPLYRQER 519
Query: 114 KINA-IGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
+ + IGPLE++VV+ G F ++++ +L G+ VSQ+KTPR V
Sbjct: 520 RKDKNIGPLEIKVVKPGAFDELMNFFLSRGSSVSQYKTPRSV 561
>AT1G48660.1 | Symbols: | auxin-responsive GH3 family protein |
chr1:17995948-17997972 REVERSE
Length = 573
Score = 119 bits (299), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 101/162 (62%), Gaps = 9/162 (5%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
L+RY +GD++++ GF+N+TP+ +FV R +++L++N + +E+D+ +
Sbjct: 386 LHRYLIGDILQVTGFYNNTPQFRFVRRKNIVLSVNSEATTEQDILKGLASATLVLESSNS 445
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTDE-------ILKECCNCLDRSFLDAGYVSSR 113
+ F+ D+S+ PGHYV +WE+ + D+ +L+ECC L+ SF DA Y R
Sbjct: 446 MLTGFTCYADISSFPGHYVFYWELKAKDVDDVVELDENVLEECCYALEESF-DALYKRLR 504
Query: 114 -KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
K +IG LE++VV++GTF ++++++ G V+Q+KTP C+
Sbjct: 505 SKEGSIGALEIKVVQQGTFDSLMEYFISKGGSVAQYKTPMCI 546
>AT1G48670.1 | Symbols: | auxin-responsive GH3 family protein |
chr1:17998946-18001200 REVERSE
Length = 525
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 102/161 (63%), Gaps = 7/161 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
L+RY +GD++++ GF+N+TP+ +FV R +++L++ + +E+D+ A++ +
Sbjct: 338 LHRYLIGDILQVTGFYNNTPQFRFVHRKNVVLSVRSETTTEEDILKALNHVGLVLESSDL 397
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINK-------EPTDEILKECCNCLDRSFLDAGYVSSR 113
++ F+ D+ST PGHYV +WE+ E ++++ +CC+ L+ SF + +
Sbjct: 398 MLMGFTCYADISTFPGHYVFYWELKAKDVQDVFELEEKVMVKCCSLLEESFDEVYRKNRS 457
Query: 114 KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCV 154
K IGPLE+RVV++GTF ++++++ G ++Q+KTP C+
Sbjct: 458 KDECIGPLEIRVVQQGTFDSLMEYFISQGGSIAQYKTPICI 498
>AT5G51470.1 | Symbols: | auxin-responsive GH3 family protein |
chr5:20907287-20909340 FORWARD
Length = 581
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 102/164 (62%), Gaps = 7/164 (4%)
Query: 1 LYRYRLGDVVKIVGFHNSTPELKFVCRTSLLLTINIDKNSEKDLHLAVDXXXXXXXXXXI 60
L+RY++GD++ + GF+N+ P+ +FV R +L L+I+++ +++DL AV +
Sbjct: 392 LHRYKMGDILLVTGFYNNAPQFRFVRRGNLTLSIHLEITTDEDLLNAVTDAKMVLESSNL 451
Query: 61 EVVDFSSLVDLSTEPGHYVIFWEINKEPTDEILK-------ECCNCLDRSFLDAGYVSSR 113
++DF+S D+ST PGHYV++WE+ + ++I++ ECC ++ S ++ V
Sbjct: 452 MLMDFTSYADISTTPGHYVLYWELKAKYRNDIVEIDKNVLVECCYVVEESLNNSYRVYRS 511
Query: 114 KINAIGPLELRVVRRGTFQKILDHYLGLGTVVSQFKTPRCVAPT 157
K IG LE+R+V++GTF +++ ++ G +Q+KTP C+ T
Sbjct: 512 KGGLIGALEIRLVQQGTFDALMEFFITQGASSTQYKTPICIKST 555