Jatropha Genome Database

JcCB0017171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0017171.10 + phase: 0 /TE
         (205 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24590.1 | Symbols:  | splicing factor, putative | chr2:10449...   156   1e-38
AT4G31580.2 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein b...   152   1e-37
AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein b...   152   1e-37
AT1G23860.2 | Symbols: SRZ-21, SRZ21 | RSZP21 (RS-CONTAINING ZIN...   143   6e-35
AT1G23860.1 | Symbols: SRZ-21, SRZ21, RSZP21 | RSZP21 (RS-CONTAI...   143   6e-35
AT1G23860.3 | Symbols: SRZ-21, SRZ21 | RSZP21 (RS-CONTAINING ZIN...   143   7e-35
AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding / ...    72   3e-13
AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding / ...    72   3e-13
AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding / ...    71   6e-13
AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid bind...    65   3e-11
AT4G02430.1 | Symbols:  | pre-mRNA splicing factor, putative / S...    64   4e-11
AT3G53500.2 | Symbols: RSZ32 | zinc knuckle (CCHC-type) family p...    64   5e-11
AT4G02430.2 | Symbols:  | pre-mRNA splicing factor, putative / S...    64   9e-11
AT1G60650.2 | Symbols:  | glycine-rich RNA-binding protein, puta...    59   2e-09
AT1G60650.1 | Symbols:  | glycine-rich RNA-binding protein, puta...    59   2e-09
AT1G09140.1 | Symbols:  | SF2/ASF-like splicing modulator (SRP30...    58   3e-09
AT1G09140.2 | Symbols:  | SF2/ASF-like splicing modulator (SRP30...    58   5e-09
AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein 34a...    57   8e-09
AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein 34a...    56   1e-08
AT3G10400.1 | Symbols:  | RNA recognition motif (RRM)-containing...    51   4e-07
AT2G46610.1 | Symbols:  | arginine/serine-rich splicing factor, ...    49   2e-06

>AT2G24590.1 | Symbols:  | splicing factor, putative |
           chr2:10449837-10450860 FORWARD
          Length = 196

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 82/111 (73%), Gaps = 6/111 (5%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           MSRVYVGNLD RVTERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDA DAI E+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHN------SXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVE SHN                      SDLKCYECGE GHFAREC
Sbjct: 61  KNGWRVEQSHNRGGGGGRGGGRGGGDGGRGRGGSDLKCYECGESGHFAREC 111


>AT4G31580.2 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein
           binding | chr4:15306983-15308064 FORWARD
          Length = 200

 Score =  152 bits (385), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 81/114 (71%), Gaps = 9/114 (7%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           MSRVYVGNLD RVTERELEDEFR FGV+RSVWVARRPPGYAF+DF+D RDA DAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN---------SXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVE SHN                         SDLKCYECGE GHFAREC
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFAREC 114


>AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein
           binding | chr4:15306983-15308064 FORWARD
          Length = 200

 Score =  152 bits (385), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 81/114 (71%), Gaps = 9/114 (7%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           MSRVYVGNLD RVTERELEDEFR FGV+RSVWVARRPPGYAF+DF+D RDA DAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN---------SXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVE SHN                         SDLKCYECGE GHFAREC
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFAREC 114


>AT1G23860.2 | Symbols: SRZ-21, SRZ21 | RSZP21 (RS-CONTAINING ZINC
           FINGER PROTEIN 21); protein binding |
           chr1:8428091-8429164 REVERSE
          Length = 187

 Score =  143 bits (361), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 72/105 (68%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           M+RVYVGNLD RVTERELEDEF+ FGV+R+VWVARRPPGYAF++FDD+RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVELSH                  D KCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHKD-KGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104


>AT1G23860.1 | Symbols: SRZ-21, SRZ21, RSZP21 | RSZP21
           (RS-CONTAINING ZINC FINGER PROTEIN 21); protein binding
           | chr1:8428091-8429164 REVERSE
          Length = 187

 Score =  143 bits (361), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 72/105 (68%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           M+RVYVGNLD RVTERELEDEF+ FGV+R+VWVARRPPGYAF++FDD+RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVELSH                  D KCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHKD-KGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104


>AT1G23860.3 | Symbols: SRZ-21, SRZ21 | RSZP21 (RS-CONTAINING ZINC
           FINGER PROTEIN 21); protein binding |
           chr1:8428091-8429164 REVERSE
          Length = 164

 Score =  143 bits (361), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/105 (68%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 1   MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
           M+RVYVGNLD RVTERELEDEF+ FGV+R+VWVARRPPGYAF++FDD+RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
           KNGWRVELSH                  D KCYECGE GHFAREC
Sbjct: 61  KNGWRVELSHKD-KGGRGGGGGRRGGIEDSKCYECGELGHFAREC 104


>AT1G02840.3 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
          nucleic acid binding / nucleotide binding |
          chr1:626918-629583 FORWARD
          Length = 303

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          VYVGNL   + ERE+ED F ++G +  +   V  RPPGYAF++FDD RDAEDAIH  DG 
Sbjct: 9  VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68

Query: 62 N----GWRVELSH 70
          +      RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81


>AT1G02840.1 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
          nucleic acid binding / nucleotide binding |
          chr1:626918-629583 FORWARD
          Length = 303

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          VYVGNL   + ERE+ED F ++G +  +   V  RPPGYAF++FDD RDAEDAIH  DG 
Sbjct: 9  VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68

Query: 62 N----GWRVELSH 70
          +      RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81


>AT1G02840.2 | Symbols: SR1, ATSRP34, SRP34 | SR1; RNA binding /
          nucleic acid binding / nucleotide binding |
          chr1:626918-628995 FORWARD
          Length = 285

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          VYVGNL   + ERE+ED F ++G +  +   V  RPPGYAF++FDD RDAEDAIH  DG 
Sbjct: 9  VYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGY 68

Query: 62 N----GWRVELSH 70
          +      RVEL+H
Sbjct: 69 DFDGHRLRVELAH 81


>AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid binding
           / nucleotide binding / zinc ion binding |
           chr2:15670372-15672331 REVERSE
          Length = 290

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 2   SRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
           +R+YVG L +R   R+LE  F R+G +R V + R    YAF++F D RDA+DA H LDG+
Sbjct: 11  TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFGDPRDADDARHYLDGR 67

Query: 62  --NGWR--VELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
             +G R  VE S  +               +  +C+ CG  GH+AR+C
Sbjct: 68  DFDGSRITVEFSRGAPRGSRDFDSRGPPPGA-GRCFNCGVDGHWARDC 114


>AT4G02430.1 | Symbols:  | pre-mRNA splicing factor, putative /
          SR1 protein, putative | chr4:1069186-1070543 FORWARD
          Length = 178

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 6/74 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + ERE+ED F ++G +  +   +  RPPGYAF++F+D RDA+DAI+  DG 
Sbjct: 9  IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68

Query: 62 N----GWRVELSHN 71
          +      RVEL+H 
Sbjct: 69 DFDGHHLRVELAHG 82


>AT3G53500.2 | Symbols: RSZ32 | zinc knuckle (CCHC-type) family
           protein | chr3:19834557-19836507 REVERSE
          Length = 284

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 2   SRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
           +R+YVG L +R   R+LE  F R+G +R V + R    YAF++F D RDA+DA + LDG+
Sbjct: 11  TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKR---DYAFVEFSDPRDADDARYYLDGR 67

Query: 62  --NGWR--VELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
             +G R  VE S  +               S  +C+ CG  GH+AR+C
Sbjct: 68  DFDGSRITVEASRGAPRGSRDNGSRGPPPGS-GRCFNCGVDGHWARDC 114


>AT4G02430.2 | Symbols:  | pre-mRNA splicing factor, putative /
          SR1 protein, putative | chr4:1069186-1071313 FORWARD
          Length = 278

 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 6/74 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + ERE+ED F ++G +  +   +  RPPGYAF++F+D RDA+DAI+  DG 
Sbjct: 9  IYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGY 68

Query: 62 N----GWRVELSHN 71
          +      RVEL+H 
Sbjct: 69 DFDGHHLRVELAHG 82


>AT1G60650.2 | Symbols:  | glycine-rich RNA-binding protein,
           putative | chr1:22340089-22342148 FORWARD
          Length = 292

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 2   SRVYVGNLDARVTERELEDEFRRFGVIR--SVWVAR---RPPGYAFIDFDDKRDAEDAIH 56
           SR++VG L   VTER+LE  F R+G I    + V R   RP G+ FI F D+R A+DAI 
Sbjct: 12  SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71

Query: 57  ELDGKNGWRVELSHNSX----------XXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
            + G+      +S N                          ++ +C++C  PGH+AR+C
Sbjct: 72  HMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWARDC 130


>AT1G60650.1 | Symbols:  | glycine-rich RNA-binding protein,
           putative | chr1:22340089-22342148 FORWARD
          Length = 292

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 2   SRVYVGNLDARVTERELEDEFRRFGVIR--SVWVAR---RPPGYAFIDFDDKRDAEDAIH 56
           SR++VG L   VTER+LE  F R+G I    + V R   RP G+ FI F D+R A+DAI 
Sbjct: 12  SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71

Query: 57  ELDGKNGWRVELSHNSX----------XXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
            + G+      +S N                          ++ +C++C  PGH+AR+C
Sbjct: 72  HMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGTEDECFKCRRPGHWARDC 130


>AT1G09140.1 | Symbols:  | SF2/ASF-like splicing modulator (SRP30)
          | chr1:2942887-2945818 REVERSE
          Length = 268

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + + E+ED F ++G I  +   +  RPPGYAF++F+D RDA+DAI+  DG 
Sbjct: 9  IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68

Query: 62 N----GWRVELSH 70
          +      RVE++H
Sbjct: 69 DFDGCRLRVEIAH 81


>AT1G09140.2 | Symbols:  | SF2/ASF-like splicing modulator (SRP30)
          | chr1:2943528-2945818 REVERSE
          Length = 256

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + + E+ED F ++G I  +   +  RPPGYAF++F+D RDA+DAI+  DG 
Sbjct: 9  IYVGNLPGDIRKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGY 68

Query: 62 N----GWRVELSH 70
          +      RVE++H
Sbjct: 69 DFDGCRLRVEIAH 81


>AT3G49430.2 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
          34a); RNA binding / nucleic acid binding / nucleotide
          binding | chr3:18332668-18334617 FORWARD
          Length = 297

 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + E E+ED F ++G I  +   V  RPP Y F++F+  RDAEDAI   DG 
Sbjct: 9  IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68

Query: 62 N----GWRVELSH 70
          N      RVEL+H
Sbjct: 69 NLDGCRLRVELAH 81


>AT3G49430.1 | Symbols: SRp34a | SRp34a (Ser/Arg-rich protein
          34a); RNA binding / nucleic acid binding / nucleotide
          binding | chr3:18332668-18334829 FORWARD
          Length = 300

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 6/73 (8%)

Query: 4  VYVGNLDARVTERELEDEFRRFGVIRSV--WVARRPPGYAFIDFDDKRDAEDAIHELDGK 61
          +YVGNL   + E E+ED F ++G I  +   V  RPP Y F++F+  RDAEDAI   DG 
Sbjct: 9  IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGY 68

Query: 62 N----GWRVELSH 70
          N      RVEL+H
Sbjct: 69 NLDGCRLRVELAH 81


>AT3G10400.1 | Symbols:  | RNA recognition motif (RRM)-containing
           protein | chr3:3232636-3233421 FORWARD
          Length = 261

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 2   SRVYVGNLDARVTERELEDEFRRFGVIRSVWV-----ARRPPGYAFIDFDDKRDAEDAIH 56
           S +YV NLD  +T  ++   F  FG +  V V      R+  G AF+ +  + DA  A  
Sbjct: 57  STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116

Query: 57  ELDGK--NGWRVELSHNSXXXXXXXXXXXXXXXSDLKCYECGEPGHFAREC 105
            +D K  NG ++ +S  +                  +CYECG+ GH + EC
Sbjct: 117 SMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYEC 167


>AT2G46610.1 | Symbols:  | arginine/serine-rich splicing factor,
          putative | chr2:19136769-19138492 REVERSE
          Length = 250

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)

Query: 1  MSRVYVGNLDARVTERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAEDAIHELDG 60
          M  VYVGN D      +LE  F +FG ++ V +     GYAF+ F+D+RDAEDAI   D 
Sbjct: 1  MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMK---SGYAFVYFEDERDAEDAIRRTDN 57