Jatropha Genome Database

JcCB0016381.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0016381.30 + phase: 0 
         (94 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20280.1 | Symbols: ATSPS1F | ATSPS1F (sucrose phosphate synt...   160   1e-40
AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2 | ATSPS2F (SUCROSE PH...   160   1e-40
AT1G04920.1 | Symbols: ATSPS3F | ATSPS3F (sucrose phosphate synt...   120   1e-28
AT4G10120.2 | Symbols: ATSPS4F | ATSPS4F; transferase, transferr...   104   1e-23
AT4G10120.1 | Symbols: ATSPS4F | ATSPS4F; sucrose-phosphate synt...   104   1e-23

>AT5G20280.1 | Symbols: ATSPS1F | ATSPS1F (sucrose phosphate
          synthase 1F); sucrose-phosphate synthase/ transferase,
          transferring glycosyl groups | chr5:6844994-6849997
          REVERSE
          Length = 1043

 Score =  160 bits (406), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 2/93 (2%)

Query: 1  MAGNDWINSYLDAILDVDPGIDNAK--LSLLLRERGRFSPTRYFVEEVITGFDETDLHRS 58
          MAGNDW+NSYL+AILDV  G+D+A+   SLLLRERGRF+P+RYFVEEVITG+DETDLHRS
Sbjct: 1  MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHRS 60

Query: 59 WLRAAAMRSTQERNTRLENMCWRIWNLARKKKQ 91
          W++A A RS QERNTRLENMCWRIWNLAR+KKQ
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARQKKQ 93


>AT5G11110.1 | Symbols: SPS1, ATSPS2F, KNS2 | ATSPS2F (SUCROSE
           PHOSPHATE SYNTHASE 2F); sucrose-phosphate synthase |
           chr5:3536426-3540901 FORWARD
          Length = 1047

 Score =  160 bits (405), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 76/100 (76%), Positives = 84/100 (84%), Gaps = 8/100 (8%)

Query: 1   MAGNDWINSYLDAILDVDPGIDNAKL--------SLLLRERGRFSPTRYFVEEVITGFDE 52
           M GNDW+NSYL+AIL  +PGI N+K         SLLLRERG FSPTRYFVEEVITGFDE
Sbjct: 1   MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60

Query: 53  TDLHRSWLRAAAMRSTQERNTRLENMCWRIWNLARKKKQV 92
           TDLHRSW++AAA RS QERNTRLEN+CWRIWNLAR+KKQV
Sbjct: 61  TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQV 100


>AT1G04920.1 | Symbols: ATSPS3F | ATSPS3F (sucrose phosphate
          synthase 3F); sucrose-phosphate synthase/ transferase,
          transferring glycosyl groups | chr1:1391674-1395756
          REVERSE
          Length = 1062

 Score =  120 bits (302), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 78/99 (78%), Gaps = 7/99 (7%)

Query: 1  MAGNDWINSYLDAILDVDP-GID----NAKLSLLLRER-GR-FSPTRYFVEEVITGFDET 53
          MAGN+WIN YL+AILD    GI+      + S+ LRE  G+ F+PT+YFVEEV+TG DET
Sbjct: 1  MAGNEWINGYLEAILDSQAQGIEETQQKPQASVNLREGDGQYFNPTKYFVEEVVTGVDET 60

Query: 54 DLHRSWLRAAAMRSTQERNTRLENMCWRIWNLARKKKQV 92
          DLHR+WL+  A R+++ERN+RLENMCWRIW+L RKKKQ+
Sbjct: 61 DLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQL 99


>AT4G10120.2 | Symbols: ATSPS4F | ATSPS4F; transferase, transferring
           glycosyl groups | chr4:6315033-6319785 FORWARD
          Length = 1050

 Score =  104 bits (259), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 25/118 (21%)

Query: 1   MAGNDWINSYLDAILDVDPGI-----DNAKLSLLL--------------------RERGR 35
           MA NDWINSYL+AILDV          N+K+   L                     +   
Sbjct: 1   MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60

Query: 36  FSPTRYFVEEVITGFDETDLHRSWLRAAAMRSTQERNTRLENMCWRIWNLARKKKQVC 93
           FSP +YFVEEV+  FDE+DL+++W++  A R+T+ER+ RLEN+CWRIW+LARKKKQ+ 
Sbjct: 61  FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIV 118


>AT4G10120.1 | Symbols: ATSPS4F | ATSPS4F; sucrose-phosphate
           synthase/ transferase, transferring glycosyl groups |
           chr4:6315033-6319785 FORWARD
          Length = 1050

 Score =  104 bits (259), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 25/118 (21%)

Query: 1   MAGNDWINSYLDAILDVDPGI-----DNAKLSLLL--------------------RERGR 35
           MA NDWINSYL+AILDV          N+K+   L                     +   
Sbjct: 1   MARNDWINSYLEAILDVGTSKKKRFESNSKIVQKLGDINSKDHQEKVFGDMNGKDHQEKV 60

Query: 36  FSPTRYFVEEVITGFDETDLHRSWLRAAAMRSTQERNTRLENMCWRIWNLARKKKQVC 93
           FSP +YFVEEV+  FDE+DL+++W++  A R+T+ER+ RLEN+CWRIW+LARKKKQ+ 
Sbjct: 61  FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIV 118