Jatropha Genome Database

JcCB0014891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0014891.10 - phase: 0 /partial
         (273 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23320.2 | Symbols: WRKY15 | WRKY15; calmodulin binding / tra...    76   2e-14
AT2G23320.1 | Symbols: WRKY15 | WRKY15; calmodulin binding / tra...    76   2e-14
AT4G24240.1 | Symbols: WRKY7, ATWRKY7 | WRKY7; calmodulin bindin...    74   8e-14
AT2G24570.1 | Symbols: WRKY17, ATWRKY17 | WRKY17; calmodulin bin...    65   4e-11
AT4G31550.1 | Symbols: WRKY11, ATWRKY11 | WRKY11; calmodulin bin...    65   5e-11
AT4G31550.2 | Symbols: WRKY11, ATWRKY11 | WRKY11; calmodulin bin...    65   5e-11

>AT2G23320.2 | Symbols: WRKY15 | WRKY15; calmodulin binding /
           transcription factor | chr2:9924998-9925991 FORWARD
          Length = 262

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 7/103 (6%)

Query: 1   MAVELMMSYRNENFISKM--EESVVQEAA-SGLESVNKLIRLLSQKNQEKDQXXXXXXXX 57
           MAVELM      N+IS +  +   VQEAA SGL+S+   I L+S+ +   DQ        
Sbjct: 1   MAVELM----TRNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASA 56

Query: 58  XXXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
                 +++      AD AVSKFK+VISLL RTRTGHARFRRA
Sbjct: 57  SASAAADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRA 99


>AT2G23320.1 | Symbols: WRKY15 | WRKY15; calmodulin binding /
           transcription factor | chr2:9924998-9926154 FORWARD
          Length = 317

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 7/103 (6%)

Query: 1   MAVELMMSYRNENFISKM--EESVVQEAA-SGLESVNKLIRLLSQKNQEKDQXXXXXXXX 57
           MAVELM      N+IS +  +   VQEAA SGL+S+   I L+S+ +   DQ        
Sbjct: 1   MAVELM----TRNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSASA 56

Query: 58  XXXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
                 +++      AD AVSKFK+VISLL RTRTGHARFRRA
Sbjct: 57  SASAAADLESARNTTADAAVSKFKRVISLLDRTRTGHARFRRA 99


>AT4G24240.1 | Symbols: WRKY7, ATWRKY7 | WRKY7; calmodulin binding /
           transcription factor | chr4:12571930-12573446 FORWARD
          Length = 353

 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 31/114 (27%)

Query: 1   MAVELMMSYRNENF-----------ISKMEESVVQEAAS-GLESVNKLIRLLSQKNQ--E 46
           M VELMMS  +               +KME++ ++EAAS G+  V + ++L+ Q  Q  E
Sbjct: 1   MTVELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFLKLIGQSQQPTE 60

Query: 47  KDQXXXXXXXXXXXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
           K Q                  +  AV DVAV+ FKKVISLLGR+RTGHARFRRA
Sbjct: 61  KSQT-----------------EITAVTDVAVNSFKKVISLLGRSRTGHARFRRA 97


>AT2G24570.1 | Symbols: WRKY17, ATWRKY17 | WRKY17; calmodulin
           binding / transcription factor | chr2:10437676-10439222
           REVERSE
          Length = 321

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 29/102 (28%)

Query: 1   MAVELMMSYRNENFISKME-ESVVQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXX 58
           M V++M        + KME ++ +QEAAS GL+S+  LIR+LS + +E++          
Sbjct: 1   MTVDIMR-------LPKMEDQTAIQEAASQGLKSMEHLIRVLSNRPEERN---------- 43

Query: 59  XXXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
                   +DC  + D  VSKFKKVISLL   R+GHARFRR 
Sbjct: 44  --------VDCSEITDFTVSKFKKVISLL--NRSGHARFRRG 75


>AT4G31550.1 | Symbols: WRKY11, ATWRKY11 | WRKY11; calmodulin
           binding / transcription factor | chr4:15290065-15291458
           REVERSE
          Length = 325

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 26/101 (25%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXX 59
           MAV+LM       F    +++ +QEAAS GL+S+  LIR+LS + +++            
Sbjct: 1   MAVDLM------RFPKIDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQH----------- 43

Query: 60  XXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
                 ++DC  + D  VSKFK VISLL   RTGHARFRR 
Sbjct: 44  ------NVDCSEITDFTVSKFKTVISLL--NRTGHARFRRG 76


>AT4G31550.2 | Symbols: WRKY11, ATWRKY11 | WRKY11; calmodulin
           binding / transcription factor | chr4:15290065-15291458
           REVERSE
          Length = 324

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 26/101 (25%)

Query: 1   MAVELMMSYRNENFISKMEESVVQEAAS-GLESVNKLIRLLSQKNQEKDQXXXXXXXXXX 59
           MAV+LM       F    +++ +QEAAS GL+S+  LIR+LS + +++            
Sbjct: 1   MAVDLM------RFPKIDDQTAIQEAASQGLQSMEHLIRVLSNRPEQQH----------- 43

Query: 60  XXMDNMDMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRA 100
                 ++DC  + D  VSKFK VISLL   RTGHARFRR 
Sbjct: 44  ------NVDCSEITDFTVSKFKTVISLL--NRTGHARFRRG 76