Jatropha Genome Database
- JcCB0014511.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0014511.10 - phase: 1 /pseudo/partial
(305 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67560.1 | Symbols: | lipoxygenase family protein | chr1:253... 114 1e-25
AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion b... 112 3e-25
AT1G72520.1 | Symbols: | lipoxygenase, putative | chr1:27308611... 110 1e-24
AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lip... 102 3e-22
AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion b... 81 9e-16
AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase | chr1:20525798... 77 1e-14
>AT1G67560.1 | Symbols: | lipoxygenase family protein |
chr1:25319926-25324117 FORWARD
Length = 917
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 35/154 (22%)
Query: 20 NATTNWL--LAKAHVCSSDAGLHQLVHH-------------------------------- 45
+ATT+W+ LAKAHVCS+DAG+HQLV+H
Sbjct: 548 DATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPH 607
Query: 46 IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRD-GRFDMDALPADLNRRDY 104
+ LEINA+AR IN G IIE F P K M +S++ Y+ RFDM+ LPADL RR
Sbjct: 608 MRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGM 667
Query: 105 VKPDPTGTKGIRLTIEDYPCASDGLLIWSTIEIL 138
+ D + G+RL I+DYP A+DGLLIW I+ L
Sbjct: 668 AEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDL 701
>AT1G17420.1 | Symbols: LOX3 | LOX3; electron carrier/ iron ion
binding / lipoxygenase/ metal ion binding /
oxidoreductase, acting on single donors with
incorporation of molecular oxygen, incorporation of two
atoms of oxygen | chr1:5977512-5981384 FORWARD
Length = 919
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 93/173 (53%), Gaps = 36/173 (20%)
Query: 4 PSVNRNHPSKQLLTP-VNATTNWL--LAKAHVCSSDAGLHQLVHH--------------- 45
P H SK++LTP V+AT+NW+ LAKAHV S+DAG+HQLV+H
Sbjct: 534 PPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAA 593
Query: 46 -----------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG 88
+ LEINA AR I+A +IE F M +SA+ Y+
Sbjct: 594 HRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSS 653
Query: 89 -RFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIEILSR 140
RFDM+ LPADL RR PD T G++L IEDYP A+DGLL+WS I+ R
Sbjct: 654 WRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVR 706
>AT1G72520.1 | Symbols: | lipoxygenase, putative |
chr1:27308611-27312589 FORWARD
Length = 926
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 88/158 (55%), Gaps = 35/158 (22%)
Query: 18 PVNATTNWL--LAKAHVCSSDAGLHQLVHH------------------------------ 45
PV+AT+NW+ LAKAHV S+DAG+HQLV+H
Sbjct: 556 PVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLD 615
Query: 46 --IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDG-RFDMDALPADLNRR 102
+ LEINA AR I+A +IE F + + IS++ Y++ RFDM+ LPADL RR
Sbjct: 616 PHMRYTLEINAVARQTLISADGVIESCFTAGQYGLEISSAAYKNKWRFDMEGLPADLIRR 675
Query: 103 DYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIEILSR 140
PDPT G++L +EDYP A+DGLL+WS I+ R
Sbjct: 676 GMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVR 713
>AT3G45140.1 | Symbols: LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2);
lipoxygenase | chr3:16525437-16529233 FORWARD
Length = 896
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 37/172 (21%)
Query: 1 TRPPSVNRNHPSKQLLTP-VNATTNWL--LAKAHVCSSDAGLHQLVHH------------ 45
T PP++N+ KQ+ TP +AT+ WL LAK H S DAG HQL+ H
Sbjct: 508 TCPPNINKPQ-WKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYI 566
Query: 46 --------------------IGMRLEINAQARGFPINAG*IIEFSFAPAK*IMHISASVY 85
+EINA+AR +N G IIE F P K + +S++VY
Sbjct: 567 IAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVY 626
Query: 86 -RDGRFDMDALPADLNRRDYVKPDPTGTKGIRLTIEDYPCASDGLLIWSTIE 136
+ RFD + LPADL +R + D T G+RLTI DYP A+DGL++W I+
Sbjct: 627 GKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIK 678
>AT3G22400.1 | Symbols: LOX5 | LOX5; electron carrier/ iron ion
binding / lipoxygenase/ metal ion binding /
oxidoreductase, acting on single donors with
incorporation of molecular oxygen, incorporation of two
atoms of oxygen | chr3:7927011-7931167 FORWARD
Length = 886
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 32/144 (22%)
Query: 25 WLLAKAHVCSSDAGLHQLVHH--------------------------------IGMRLEI 52
W LAKA+ +D+G HQL+ H + I
Sbjct: 522 WQLAKAYAAVNDSGYHQLISHWLQTHAVIEPFIIASNRQLSVVHPIHKLLHPHFRDTMNI 581
Query: 53 NAQARGFPINAG*IIEFSFAPAK*IMHISASVYRDGRFDMDALPADLNRRDYVKPDPTGT 112
NA AR IN+ ++E + P++ M +S+S+Y++ F ALP DL +R DP
Sbjct: 582 NALARHVLINSDGVLERTVFPSRYAMEMSSSIYKNWVFTEQALPKDLLKRGVAVEDPNSD 641
Query: 113 KGIRLTIEDYPCASDGLLIWSTIE 136
G++L IEDYP A DGL IWS I+
Sbjct: 642 NGVKLLIEDYPFAVDGLEIWSAIK 665
>AT1G55020.1 | Symbols: LOX1 | LOX1; lipoxygenase |
chr1:20525798-20530143 FORWARD
Length = 859
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 67/149 (44%), Gaps = 33/149 (22%)
Query: 25 WLLAKAHVCSSDAGLHQLVHHIGMR--------------------------------LEI 52
W LAKA V +D+G HQL+ H + I
Sbjct: 499 WQLAKAFVGVNDSGNHQLISHWMQTHASIEPFVIATNRQLSVLHPVFKLLEPHFRDTMNI 558
Query: 53 NAQARGFPINAG*IIEFSFAPAK*IMHISASVYRD-GRFDMDALPADLNRRDYVKPDPTG 111
NA AR IN G I E + P+K M +S+ +Y++ F ALPA+L +R DP
Sbjct: 559 NALARQILINGGGIFEITVFPSKYAMEMSSFIYKNHWTFPDQALPAELKKRGMAVEDPEA 618
Query: 112 TKGIRLTIEDYPCASDGLLIWSTIEILSR 140
G+RL I+DYP A DGL +W IE R
Sbjct: 619 PHGLRLRIKDYPYAVDGLEVWYAIESWVR 647