Jatropha Genome Database

JcCB0012961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012961.10 - phase: 2 /pseudo/partial
         (359 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31180.2 | Symbols:  | aspartyl-tRNA synthetase, putative / a...   183   1e-46
AT4G31180.1 | Symbols:  | aspartyl-tRNA synthetase, putative / a...   183   1e-46
AT4G26870.1 | Symbols:  | aspartyl-tRNA synthetase, putative / a...   168   4e-42

>AT4G31180.2 | Symbols:  | aspartyl-tRNA synthetase, putative /
           aspartate--tRNA ligase, putative |
           chr4:15156696-15159362 FORWARD
          Length = 558

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 83/114 (72%), Positives = 99/114 (86%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGG++ F+L+YKGQPACLAQS QLHKQMAICGD  RVFEVG VF+AE+S+T RHLCEF
Sbjct: 284 SSEGGSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEF 343

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
           VG DVEMEI+KHYSE+MD+VD LF+ IF  LNE CK EL+AV +Q+PFEPLK +
Sbjct: 344 VGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKELQAVGKQYPFEPLKFL 397


>AT4G31180.1 | Symbols:  | aspartyl-tRNA synthetase, putative /
           aspartate--tRNA ligase, putative |
           chr4:15156696-15159362 FORWARD
          Length = 558

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 83/114 (72%), Positives = 99/114 (86%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGG++ F+L+YKGQPACLAQS QLHKQMAICGD  RVFEVG VF+AE+S+T RHLCEF
Sbjct: 284 SSEGGSAVFRLEYKGQPACLAQSPQLHKQMAICGDLRRVFEVGPVFRAEDSFTHRHLCEF 343

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
           VG DVEMEI+KHYSE+MD+VD LF+ IF  LNE CK EL+AV +Q+PFEPLK +
Sbjct: 344 VGLDVEMEIRKHYSEIMDLVDELFVFIFTSLNERCKKELQAVGKQYPFEPLKFL 397


>AT4G26870.1 | Symbols:  | aspartyl-tRNA synthetase, putative /
           aspartate--tRNA ligase, putative |
           chr4:13505381-13507619 FORWARD
          Length = 532

 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/114 (67%), Positives = 94/114 (82%)

Query: 197 ASEGGASAFKLDYKGQPACLAQSHQLHKQMAICGDKERVFEVGSVFKAEESYTPRHLCEF 256
           +SEGG++ F+LDYKGQPACLAQS QLHKQMAICGD  RVFEVG VF+AE+S+T RHLCEF
Sbjct: 258 SSEGGSAVFRLDYKGQPACLAQSPQLHKQMAICGDMRRVFEVGPVFRAEDSFTHRHLCEF 317

Query: 257 VGHDVEMEIKKHYSEVMDVVDRLFITIFDYLNEHCKNELEAVQRQHPFEPLKVI 310
           VG DVEMEI+ HYSE+MD+V  LF  IF  + E C  ELE+V++Q+PF+ LK +
Sbjct: 318 VGLDVEMEIRMHYSEIMDLVGELFPFIFTKIEERCPKELESVRKQYPFQSLKFL 371