Jatropha Genome Database

JcCB0012061.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0012061.20 - phase: 2 /TE
         (1291 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   363   e-100
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   175   2e-43
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    83   1e-15
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    72   2e-12
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    69   2e-11

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  363 bits (933), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/477 (38%), Positives = 291/477 (61%), Gaps = 6/477 (1%)

Query: 764  CSLVVNEPTRYAEAQXFQPWRRAMKAELEMINKNEIWQLVDRRANRKVIGVKRVFKTKFN 823
            C     EP+ Y EA+ F  W  AM  E+  +     W++     N+K IG K V+K K+N
Sbjct: 79   CIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYN 138

Query: 824  SDGSICKHKARLVVKGYAQQYGVDYXETFAPVARYDTIKLLLTFAAHNSWQIHQLDVKSA 883
            SDG+I ++KARLV KGY QQ G+D+ ETF+PV +  ++KL+L  +A  ++ +HQLD+ +A
Sbjct: 139  SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198

Query: 884  FLNGFLNEEIFVEQPDDFLIPRKE----DQVYFLNKALYGLKQAPRAWYERMDNYLMQLG 939
            FLNG L+EEI+++ P  +   + +    + V +L K++YGLKQA R W+ +    L+  G
Sbjct: 199  FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258

Query: 940  FSRSQSEATLYVRNTDDEFLVVSIYVDDMLVTGSKLELIQKFKNEMEKVFEMTDLGIMKY 999
            F +S S+ T +++ T   FL V +YVDD+++  +    + + K++++  F++ DLG +KY
Sbjct: 259  FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318

Query: 1000 FLGMEVLQTNDGFFISQQKYISDILYRFKMQDCKPVSTPISTGLKLGKDENTEKVDTILY 1059
            FLG+E+ ++  G  I Q+KY  D+L    +  CKP S P+   +        + VD   Y
Sbjct: 319  FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378

Query: 1060 RSLIGSLLYLTASRPDILLAVSLLSRFMHLPRETHFTAAKRVLRYIKGTSTFGMFFAAIA 1119
            R LIG L+YL  +R DI  AV+ LS+F   PR  H  A  ++L YIKGT   G+F+++ A
Sbjct: 379  RRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQA 438

Query: 1120 GESLKLVGYCDSDWGGCIEDSRSTSGYLFSLGTSFFSWSSKKQETTAQSTAKAEYIATAS 1179
               L++  + D+ +  C +  RST+GY   LGTS  SW SKKQ+  ++S+A+AEY A + 
Sbjct: 439  EMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 496

Query: 1180 AVNQAIWLRKMLKDLQCEQTEATKIMCDNISAVSISKNPVFHGRTKHIKIKFHFIRE 1236
            A ++ +WL +  ++LQ   ++ T + CDN +A+ I+ N VFH RTKHI+   H +RE
Sbjct: 497  ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  175 bits (443), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 131/225 (58%), Gaps = 5/225 (2%)

Query: 963  IYVDDMLVTGSKLELIQKFKNEMEKVFEMTDLGIMKYFLGMEVLQTNDGFFISQQKYISD 1022
            +YVDD+L+TGS   L+     ++   F M DLG + YFLG+++     G F+SQ KY   
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1023 ILYRFKMQDCKPVSTPISTGLKLGKDENTEKV-DTILYRSLIGSLLYLTASRPDILLAVS 1081
            IL    M DCKP+STP+   LKL    +T K  D   +RS++G+L YLT +RPDI  AV+
Sbjct: 65   ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 122

Query: 1082 LLSRFMHLPRETHFTAAKRVLRYIKGTSTFGMFFAAIAGESLKLVGYCDSDWGGCIEDSR 1141
            ++ + MH P    F   KRVLRY+KGT   G++        L +  +CDSDW GC    R
Sbjct: 123  IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIH--KNSKLNVQAFCDSDWAGCTSTRR 180

Query: 1142 STSGYLFSLGTSFFSWSSKKQETTAQSTAKAEYIATASAVNQAIW 1186
            ST+G+   LG +  SWS+K+Q T ++S+ + EY A A    +  W
Sbjct: 181  STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 60/86 (69%)

Query: 783 WRRAMKAELEMINKNEIWQLVDRRANRKVIGVKRVFKTKFNSDGSICKHKARLVVKGYAQ 842
           W +AM+ EL+ +++N+ W LV    N+ ++G K VFKTK +SDG++ + KARLV KG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 843 QYGVDYXETFAPVARYDTIKLLLTFA 868
           + G+ + ET++PV R  TI+ +L  A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 599 NRTVIEMARCLLIEKQMPNQFXAEAVNTSVYLLNRLPTKALQDKTPYEAWYDHKPTIHHI 658
           NRT+IE  R +L E  +P  F A+A NT+V+++N+ P+ A+    P E W+   PT  ++
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 659 KIFGCICYYQVSKSKRSKLDNRAKKG 684
           + FGC+ Y    +    KL  RAKKG
Sbjct: 62  RRFGCVAYIHCDE---GKLKPRAKKG 84


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)

Query: 1067 LYLTASRPDILLAVSLLSRFMHLPRETHFTAAKRVLRYIKGTSTFGMFFAAIAGESLKLV 1126
            +YLT +RPD+  AV+ LS+F    R     A  +VL Y+KGT   G+F++A +   L+L 
Sbjct: 1    MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS--DLQLK 58

Query: 1127 GYCDSDWGGCIEDSRSTSGY 1146
             + DSDW  C +  RS +G+
Sbjct: 59   AFADSDWASCPDTRRSVTGF 78