Jatropha Genome Database

JcCB0011561.50
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0011561.50 - phase: 0 /partial/short
         (48 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06950.4 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    60   3e-10
AT5G06950.3 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    60   3e-10
AT5G06950.2 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    60   3e-10
AT5G06950.1 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding / tr...    60   3e-10
AT3G12250.5 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    57   3e-09
AT3G12250.4 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    57   3e-09
AT3G12250.3 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    57   3e-09
AT3G12250.2 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    57   3e-09
AT3G12250.1 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING ...    57   3e-09
AT5G10030.1 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING FA...    53   4e-08
AT1G22070.1 | Symbols: TGA3 | TGA3; DNA binding / calmodulin bin...    52   8e-08
AT5G06960.2 | Symbols: OBF5, TGA5 | OBF5 (OCS-ELEMENT BINDING FA...    52   1e-07
AT5G06960.1 | Symbols: OBF5, TGA5 | OBF5 (OCS-ELEMENT BINDING FA...    52   1e-07
AT5G65210.5 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT5G65210.4 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT5G65210.3 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT5G65210.1 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT5G65210.2 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT5G65210.6 | Symbols: TGA1 | TGA1; DNA binding / calmodulin bin...    50   2e-07
AT1G77920.1 | Symbols:  | bZIP family transcription factor | chr...    50   3e-07

>AT5G06950.4 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           ADNLR QTLQQM R+LTTRQSARALLAIHDYF
Sbjct: 283 ADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314


>AT5G06950.3 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           ADNLR QTLQQM R+LTTRQSARALLAIHDYF
Sbjct: 283 ADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314


>AT5G06950.2 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           ADNLR QTLQQM R+LTTRQSARALLAIHDYF
Sbjct: 283 ADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314


>AT5G06950.1 | Symbols: AHBP-1B, TGA2 | AHBP-1B; DNA binding /
           transcription activator/ transcription factor/
           transcription repressor | chr5:2152323-2154174 FORWARD
          Length = 330

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           ADNLR QTLQQM R+LTTRQSARALLAIHDYF
Sbjct: 283 ADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314


>AT3G12250.5 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906636-3908583 FORWARD
          Length = 303

 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QTLQQM R+LTTRQSARALLAIHDY
Sbjct: 256 ADNLRLQTLQQMLRVLTTRQSARALLAIHDY 286


>AT3G12250.4 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 355

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QTLQQM R+LTTRQSARALLAIHDY
Sbjct: 308 ADNLRLQTLQQMLRVLTTRQSARALLAIHDY 338


>AT3G12250.3 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906573-3908583 FORWARD
          Length = 324

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QTLQQM R+LTTRQSARALLAIHDY
Sbjct: 277 ADNLRLQTLQQMLRVLTTRQSARALLAIHDY 307


>AT3G12250.2 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 330

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QTLQQM R+LTTRQSARALLAIHDY
Sbjct: 283 ADNLRLQTLQQMLRVLTTRQSARALLAIHDY 313


>AT3G12250.1 | Symbols: TGA6, BZIP45 | TGA6 (TGACG MOTIF-BINDING
           FACTOR 6); DNA binding / transcription factor |
           chr3:3906351-3908583 FORWARD
          Length = 330

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QTLQQM R+LTTRQSARALLAIHDY
Sbjct: 283 ADNLRLQTLQQMLRVLTTRQSARALLAIHDY 313


>AT5G10030.1 | Symbols: TGA4, OBF4 | TGA4 (TGACG MOTIF-BINDING
           FACTOR 4); DNA binding / calmodulin binding /
           transcription factor | chr5:3137648-3139295 REVERSE
          Length = 364

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQMHRILTTRQ+AR LLA+ +YF
Sbjct: 315 ADHLRHETLQQMHRILTTRQAARGLLALGEYF 346


>AT1G22070.1 | Symbols: TGA3 | TGA3; DNA binding / calmodulin
           binding / protein binding / transcription factor |
           chr1:7789651-7791821 FORWARD
          Length = 384

 Score = 52.0 bits (123), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LRQQTLQQM +ILTTRQ+AR LLA+ +YF
Sbjct: 335 ADHLRQQTLQQMSKILTTRQAARGLLALGEYF 366


>AT5G06960.2 | Symbols: OBF5, TGA5 | OBF5 (OCS-ELEMENT BINDING
           FACTOR 5); DNA binding / protein binding / transcription
           factor | chr5:2155742-2157400 FORWARD
          Length = 330

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QT QQM R+LTTRQSARALLA+H+Y
Sbjct: 283 ADNLRLQTYQQMVRLLTTRQSARALLAVHNY 313


>AT5G06960.1 | Symbols: OBF5, TGA5 | OBF5 (OCS-ELEMENT BINDING
           FACTOR 5); DNA binding / protein binding / transcription
           factor | chr5:2155742-2157400 FORWARD
          Length = 330

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDY 31
           ADNLR QT QQM R+LTTRQSARALLA+H+Y
Sbjct: 283 ADNLRLQTYQQMVRLLTTRQSARALLAVHNY 313


>AT5G65210.5 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 319 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 350


>AT5G65210.4 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 319 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 350


>AT5G65210.3 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 319 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 350


>AT5G65210.1 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 319 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 350


>AT5G65210.2 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059031-26060749
           FORWARD
          Length = 368

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 319 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 350


>AT5G65210.6 | Symbols: TGA1 | TGA1; DNA binding / calmodulin
           binding / transcription factor | chr5:26059353-26060749
           FORWARD
          Length = 298

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 29/32 (90%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LR +TLQQM+RILTTRQ+AR LLA+ +YF
Sbjct: 249 ADHLRHETLQQMYRILTTRQAARGLLALGEYF 280


>AT1G77920.1 | Symbols:  | bZIP family transcription factor |
           chr1:29298959-29300607 FORWARD
          Length = 368

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 28/32 (87%)

Query: 1   ADNLRQQTLQQMHRILTTRQSARALLAIHDYF 32
           AD+LRQQTLQQM +ILTTRQSAR LLA+ +Y 
Sbjct: 319 ADHLRQQTLQQMAKILTTRQSARGLLALGEYL 350