Jatropha Genome Database
- JcCB0011311.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0011311.20 - phase: 0 /partial
(310 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 537 e-153
AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 537 e-153
AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 534 e-152
AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING PR... 456 e-129
AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide bindin... 86 2e-17
AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5); nu... 86 3e-17
AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of osmotic... 83 2e-16
AT5G13480.1 | Symbols: FY | FY; protein binding | chr5:4326638-4... 82 6e-16
AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta... 79 4e-15
AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta... 79 4e-15
AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta... 79 4e-15
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 77 1e-14
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 77 2e-14
AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739... 77 2e-14
AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin ... 76 2e-14
AT2G43770.1 | Symbols: | transducin family protein / WD-40 repe... 76 3e-14
AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta... 75 5e-14
AT1G79990.5 | Symbols: | protein binding / structural molecule ... 75 5e-14
AT1G79990.3 | Symbols: | protein binding / structural molecule ... 75 6e-14
AT1G79990.1 | Symbols: | protein binding / structural molecule ... 75 6e-14
AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS... 73 2e-13
AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic regu... 72 5e-13
AT2G33340.2 | Symbols: | nucleotide binding / ubiquitin-protein... 70 1e-12
AT2G33340.1 | Symbols: | nucleotide binding / ubiquitin-protein... 70 1e-12
AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIV... 70 2e-12
AT1G10580.1 | Symbols: | transducin family protein / WD-40 repe... 67 1e-11
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 67 1e-11
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide bi... 65 5e-11
AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR ACTIV... 65 7e-11
AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein | chr2:... 64 2e-10
AT3G18140.1 | Symbols: | transducin family protein / WD-40 repe... 63 2e-10
AT1G04510.1 | Symbols: | transducin family protein / WD-40 repe... 63 2e-10
AT1G71840.1 | Symbols: | transducin family protein / WD-40 repe... 63 2e-10
AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 2e-10
AT1G15470.1 | Symbols: | transducin family protein / WD-40 repe... 63 3e-10
AT2G05720.1 | Symbols: | transducin family protein / WD-40 repe... 63 3e-10
AT1G04510.2 | Symbols: | transducin family protein / WD-40 repe... 62 3e-10
AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | MSI2 (MULTICOP... 62 6e-10
AT5G23430.2 | Symbols: | transducin family protein / WD-40 repe... 62 6e-10
AT5G23430.1 | Symbols: | transducin family protein / WD-40 repe... 62 6e-10
AT2G22040.1 | Symbols: | transducin family protein / WD-40 repe... 60 1e-09
AT5G43920.1 | Symbols: | transducin family protein / WD-40 repe... 59 3e-09
AT1G73720.1 | Symbols: | transducin family protein / WD-40 repe... 58 7e-09
AT3G20740.1 | Symbols: FIE, FIS3, FIE1 | FIE (FERTILIZATION-INDE... 58 7e-09
AT3G27640.1 | Symbols: | transducin family protein / WD-40 repe... 58 8e-09
AT2G47410.1 | Symbols: | nucleotide binding | chr2:19449133-194... 57 1e-08
AT2G26060.2 | Symbols: emb1345 | emb1345 (embryo defective 1345)... 57 2e-08
AT4G29730.1 | Symbols: NFC5, MSI5 | NFC5 (Nucleosome/chromatin a... 57 2e-08
AT3G15470.1 | Symbols: | WD-40 repeat family protein | chr3:521... 57 2e-08
AT1G52730.1 | Symbols: | transducin family protein / WD-40 repe... 57 2e-08
AT1G52730.2 | Symbols: | transducin family protein / WD-40 repe... 57 2e-08
AT2G26060.1 | Symbols: emb1345 | emb1345 (embryo defective 1345)... 56 2e-08
AT5G56130.1 | Symbols: | transducin family protein / WD-40 repe... 56 3e-08
AT2G21390.1 | Symbols: | coatomer protein complex, subunit alph... 56 3e-08
AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucle... 56 3e-08
AT5G53500.1 | Symbols: | WD-40 repeat family protein | chr5:217... 56 4e-08
AT2G19540.1 | Symbols: | transducin family protein / WD-40 repe... 56 4e-08
AT4G29830.1 | Symbols: VIP3 | VIP3 (vernalization independence 3... 55 4e-08
AT2G01330.1 | Symbols: | transducin family protein / WD-40 repe... 55 5e-08
AT2G46290.1 | Symbols: | eukaryotic translation initiation fact... 55 5e-08
AT4G28450.1 | Symbols: | nucleotide binding / protein binding |... 55 7e-08
AT2G34260.1 | Symbols: | transducin family protein / WD-40 repe... 54 9e-08
AT5G64730.1 | Symbols: | transducin family protein / WD-40 repe... 54 9e-08
AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | FV... 54 9e-08
AT5G50230.1 | Symbols: | nucleotide binding | chr5:20448632-204... 54 1e-07
AT3G15610.1 | Symbols: | transducin family protein / WD-40 repe... 54 1e-07
AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTO... 54 1e-07
AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTO... 54 1e-07
AT2G33340.3 | Symbols: | nucleotide binding / ubiquitin-protein... 54 2e-07
AT1G62020.1 | Symbols: | coatomer protein complex, subunit alph... 54 2e-07
AT3G50390.1 | Symbols: | transducin family protein / WD-40 repe... 53 2e-07
AT5G60940.1 | Symbols: | transducin family protein / WD-40 repe... 53 3e-07
AT3G18140.2 | Symbols: | transducin family protein / WD-40 repe... 52 3e-07
AT3G21540.1 | Symbols: | transducin family protein / WD-40 repe... 52 4e-07
AT5G54200.1 | Symbols: | WD-40 repeat family protein | chr5:219... 52 4e-07
AT5G49430.1 | Symbols: | transducin family protein / WD-40 repe... 52 4e-07
AT5G60940.2 | Symbols: | transducin family protein / WD-40 repe... 52 4e-07
AT4G04940.1 | Symbols: | transducin family protein / WD-40 repe... 52 4e-07
AT1G80670.1 | Symbols: | transducin family protein / WD-40 repe... 52 4e-07
AT4G35050.1 | Symbols: MSI3, NFC3 | MSI3 (MULTICOPY SUPPRESSOR O... 52 5e-07
AT1G48870.1 | Symbols: | WD-40 repeat family protein | chr1:180... 52 5e-07
AT4G33260.1 | Symbols: CDC20.2 | CDC20.2; signal transducer | ch... 52 5e-07
AT4G33270.1 | Symbols: CDC20.1 | CDC20.1; signal transducer | ch... 52 7e-07
AT4G34380.1 | Symbols: | transducin family protein / WD-40 repe... 51 8e-07
AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4 pr... 51 9e-07
AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTI... 50 1e-06
AT5G64630.2 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIAT... 50 2e-06
AT5G64630.1 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIAT... 50 2e-06
AT3G44530.1 | Symbols: HIRA | HIRA (Arabidopsis homolog of histo... 50 2e-06
AT1G15440.2 | Symbols: | transducin family protein / WD-40 repe... 50 2e-06
AT3G18950.1 | Symbols: | transducin family protein / WD-40 repe... 50 2e-06
AT1G15440.1 | Symbols: | transducin family protein / WD-40 repe... 50 2e-06
AT5G42010.1 | Symbols: | WD-40 repeat family protein | chr5:168... 50 2e-06
AT3G18860.2 | Symbols: | transducin family protein / WD-40 repe... 50 3e-06
AT3G18860.1 | Symbols: | transducin family protein / WD-40 repe... 50 3e-06
AT4G32551.1 | Symbols: LUG, RON2 | LUG (LEUNIG); protein binding... 49 3e-06
AT5G02430.1 | Symbols: | WD-40 repeat family protein | chr5:526... 49 3e-06
AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUP... 49 4e-06
AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1... 49 4e-06
AT2G37670.1 | Symbols: | WD-40 repeat family protein | chr2:157... 49 4e-06
AT5G26900.1 | Symbols: | WD-40 repeat family protein | chr5:946... 49 5e-06
AT1G49450.1 | Symbols: | transducin family protein / WD-40 repe... 49 5e-06
AT1G64610.2 | Symbols: | WD-40 repeat family protein | chr1:239... 49 5e-06
AT1G64610.1 | Symbols: | WD-40 repeat family protein | chr1:239... 49 5e-06
AT5G24320.1 | Symbols: | WD-40 repeat family protein | chr5:828... 48 6e-06
AT5G56190.2 | Symbols: | WD-40 repeat family protein | chr5:227... 48 7e-06
AT5G56190.1 | Symbols: | WD-40 repeat family protein | chr5:227... 48 7e-06
AT2G26490.1 | Symbols: | transducin family protein / WD-40 repe... 48 8e-06
>AT4G34460.4 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16479266 REVERSE
Length = 372
Score = 537 bits (1384), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/311 (83%), Positives = 284/311 (91%), Gaps = 2/311 (0%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
VYSLDWT ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP GQSVACGGL
Sbjct: 63 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 122
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DSVCSIF+L+S D+DG +PVS+ML+GH+GYVS CQYVP+ED HLITSSGDQTC+LWD+T
Sbjct: 123 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 182
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
TGL+TSVFGGEFQSGHTADVLS+SI+GS+ F+SGSCDSTARLWDTR ASRAVRTFHGH
Sbjct: 183 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 242
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
EGDVN VKFFPDG RFGTGSDDGTCRL+DIRTGHQLQV YQ HGD E VTSIAFS+SG
Sbjct: 243 EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV-YQPHGDGENGPVTSIAFSVSG 301
Query: 241 RLLFAGY-SNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLK 299
RLLFAGY SN CYVWDTLL +VVL+LG Q+SH RISCLGLSADGSALCTGS+D+NLK
Sbjct: 302 RLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLK 361
Query: 300 IWAFGGHRKVI 310
IWAFGGHR+VI
Sbjct: 362 IWAFGGHRRVI 372
>AT4G34460.1 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16479266 REVERSE
Length = 377
Score = 537 bits (1383), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/311 (83%), Positives = 284/311 (91%), Gaps = 2/311 (0%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
VYSLDWT ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP GQSVACGGL
Sbjct: 68 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 127
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DSVCSIF+L+S D+DG +PVS+ML+GH+GYVS CQYVP+ED HLITSSGDQTC+LWD+T
Sbjct: 128 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
TGL+TSVFGGEFQSGHTADVLS+SI+GS+ F+SGSCDSTARLWDTR ASRAVRTFHGH
Sbjct: 188 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
EGDVN VKFFPDG RFGTGSDDGTCRL+DIRTGHQLQV YQ HGD E VTSIAFS+SG
Sbjct: 248 EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV-YQPHGDGENGPVTSIAFSVSG 306
Query: 241 RLLFAGY-SNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLK 299
RLLFAGY SN CYVWDTLL +VVL+LG Q+SH RISCLGLSADGSALCTGS+D+NLK
Sbjct: 307 RLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLK 366
Query: 300 IWAFGGHRKVI 310
IWAFGGHR+VI
Sbjct: 367 IWAFGGHRRVI 377
>AT4G34460.2 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477393-16478769 REVERSE
Length = 315
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/311 (83%), Positives = 284/311 (91%), Gaps = 2/311 (0%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
VYSLDWT ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP GQSVACGGL
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DSVCSIF+L+S D+DG +PVS+ML+GH+GYVS CQYVP+ED HLITSSGDQTC+LWD+T
Sbjct: 66 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
TGL+TSVFGGEFQSGHTADVLS+SI+GS+ F+SGSCDSTARLWDTR ASRAVRTFHGH
Sbjct: 126 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
EGDVN VKFFPDG RFGTGSDDGTCRL+DIRTGHQLQV YQ HGD E VTSIAFS+SG
Sbjct: 186 EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV-YQPHGDGENGPVTSIAFSVSG 244
Query: 241 RLLFAGY-SNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLK 299
RLLFAGY SN CYVWDTLL +VVL+LG Q+SH RISCLGLSADGSALCTGS+D+NLK
Sbjct: 245 RLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLK 304
Query: 300 IWAFGGHRKVI 310
IWAFGGHR+VI
Sbjct: 305 IWAFGGHRRVI 315
>AT4G34460.3 | Symbols: AGB1, ELK4, ATAGB1 | AGB1 (GTP BINDING
PROTEIN BETA 1); GTPase/ nucleotide binding / protein
binding | chr4:16477586-16479266 REVERSE
Length = 347
Score = 456 bits (1174), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/267 (83%), Positives = 240/267 (89%), Gaps = 2/267 (0%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
VYSLDWT ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSP GQSVACGGL
Sbjct: 68 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 127
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DSVCSIF+L+S D+DG +PVS+ML+GH+GYVS CQYVP+ED HLITSSGDQTC+LWD+T
Sbjct: 128 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
TGL+TSVFGGEFQSGHTADVLS+SI+GS+ F+SGSCDSTARLWDTR ASRAVRTFHGH
Sbjct: 188 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 247
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
EGDVN VKFFPDG RFGTGSDDGTCRL+DIRTGHQLQV YQ HGD E VTSIAFS+SG
Sbjct: 248 EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQV-YQPHGDGENGPVTSIAFSVSG 306
Query: 241 RLLFAGY-SNGDCYVWDTLLAQVVLNL 266
RLLFAGY SN CYVWDTLL + L
Sbjct: 307 RLLFAGYASNNTCYVWDTLLGEFSCRL 333
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 18/232 (7%)
Query: 78 NLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHT 137
+L + L GH G V S + P E ++++S D ++W+ T +T T
Sbjct: 54 DLVCCRTLQGHTGKVYSLDWTP-ERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMT 112
Query: 138 ADVLSISINGSSSRMFVSGSCDSTARLW------DTRVASRAVRTFHGHEGDVNAVKFFP 191
+ S NG S G DS ++ D R GH G V+ ++ P
Sbjct: 113 C---AFSPNGQS---VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVP 166
Query: 192 DGN-RFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLF-AGYSN 249
+ + T S D TC L+D+ TG + V+ + V S++ S S F +G +
Sbjct: 167 NEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 226
Query: 250 GDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+WDT A + + HEG ++ + DG TGS D +++
Sbjct: 227 STARLWDTRAASRAVRT---FHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLY 275
>AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide binding |
chr2:17304319-17306855 REVERSE
Length = 554
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 30/262 (11%)
Query: 48 FSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLIT 107
FSP +A D ++ DG L + GH ++ + P +L T
Sbjct: 306 FSPVDDCLATASADRTAKLWKT------DGTL--LQTFEGHLDRLARVAFHP-SGKYLGT 356
Query: 108 SSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSC--DSTARLW 165
+S D+T LWDI TG + Q GH+ V I+ + ++ SC DS AR+W
Sbjct: 357 TSYDKTWRLWDINTGAELLL-----QEGHSRSVYGIAFQQDGA---LAASCGLDSLARVW 408
Query: 166 DTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGD 225
D R R++ F GH V +V F P+G +G +D CR++D+R L + H +
Sbjct: 409 DLRTG-RSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI-IPAHAN 466
Query: 226 NEVPHVTSIAFSI-SGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSA 284
V+ + + G L + +W +V +L HE +++ L ++A
Sbjct: 467 ----LVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLA----GHESKVASLDITA 518
Query: 285 DGSALCTGSYDTNLKIWAFGGH 306
D S + T S+D +K+W G+
Sbjct: 519 DSSCIATVSHDRTIKLWTSSGN 540
>AT5G25150.1 | Symbols: TAF5 | TAF5 (TBP-ASSOCIATED FACTOR 5);
nucleotide binding / transcription regulator |
chr5:8677117-8682058 FORWARD
Length = 669
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 84 MLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSI 143
+L GH G V S + P D +++SS D T LW + GH V
Sbjct: 413 LLLGHSGPVYSATFSPPGD-FVLSSSADTTIRLWSTKLNANLVCY-----KGHNYPVWDA 466
Query: 144 SINGSSSRMFVSGSCDSTARLWDT-RVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
+ F S S D TAR+W R+ + +R GH DV+ V++ P+ N TGS D
Sbjct: 467 QFS-PFGHYFASCSHDRTARIWSMDRI--QPLRIMAGHLSDVDCVQWHPNCNYIATGSSD 523
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQV 262
T RL+D++TG ++++ V S+A S GR + +G +G +WD A+
Sbjct: 524 KTVRLWDVQTGECVRIFIGHRS-----MVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 578
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ L H + L S +GS L +GS D +K+W
Sbjct: 579 ITPL----MGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 15/226 (6%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
VYS ++ + ++S+S D + +W+ + K V FSP G A
Sbjct: 421 VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSH 480
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D I+++ DR L ++++GH V Q+ P+ + ++ T S D+T LWD+
Sbjct: 481 DRTARIWSM----DRIQPL---RIMAGHLSDVDCVQWHPNCN-YIATGSSDKTVRLWDVQ 532
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
TG +F GH + VLS++++ R SG D T +WD A R + GH
Sbjct: 533 TGECVRIF-----IGHRSMVLSLAMS-PDGRYMASGDEDGTIMMWDLSTA-RCITPLMGH 585
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDN 226
V ++ + +G+ +GS D T +L+D+ + +L +++G++
Sbjct: 586 NSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNS 631
>AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of
osmotically responsive genes 15) |
chr5:26857268-26860974 FORWARD
Length = 613
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 41/273 (15%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V T ++ G +A G D I+ LN G L + LS HKG + S ++ D
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTLN------GELIST--LSKHKGPIFSLKWNKKGD 378
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+L+T S D+T V+WD+ F EF SG T DV + ++ F + S DS
Sbjct: 379 -YLLTGSVDRTAVVWDVKAEEWKQQF--EFHSGPTLDV-----DWRNNVSFATSSTDSMI 430
Query: 163 RLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVY 219
L +R +TF GH+G+VN VK+ P G+ + SDD T ++++I+ H L+ +
Sbjct: 431 YLCKIG-ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREH 489
Query: 220 YQQHGDNEVPHVTSIAFSISG--------RLLFAGYS-NGDCYVWDTLLAQVVLNLGSLQ 270
++ + +I +S +G +L A S + +WD L +++ +
Sbjct: 490 TKE--------IYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSF---- 537
Query: 271 NSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
N H + L S +G + +GS D ++ IW+
Sbjct: 538 NGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI 570
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
++SL W + + +++ S D +VW+ + + + + S A
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSST 426
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DS+ + + G +K +GH+G V+ ++ P + L + S D T +W+I
Sbjct: 427 DSMIYLCKI-------GETRPAKTFTGHQGEVNCVKWDP-TGSLLASCSDDSTAKIWNI- 477
Query: 121 TGLRTSVFGGEFQSGHTADVLSI--------SINGSSSRMFVSGSCDSTARLWDTRVASR 172
+ S F + + HT ++ +I + N + S S DST +LWD + +
Sbjct: 478 ---KQSTFVHDLRE-HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELG-K 532
Query: 173 AVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEV 228
+ +F+GH V ++ F P+G +GS D + ++ I+ G ++ Y G EV
Sbjct: 533 MLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEV 588
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 167 TRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI--------RTGHQLQV 218
+ + + VR GH +V A + P + +GS D T R++ I TG +
Sbjct: 251 SHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINA 310
Query: 219 YYQQHG----DNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHE 274
+H + + VT++ ++ G LL G +G +W TL +++ L + H+
Sbjct: 311 LILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTL----SKHK 365
Query: 275 GRISCLGLSADGSALCTGSYDTNLKIW 301
G I L + G L TGS D +W
Sbjct: 366 GPIFSLKWNKKGDYLLTGSVDRTAVVW 392
>AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 647
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 125/297 (42%), Gaps = 24/297 (8%)
Query: 6 WTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 65
WT R+++ SQ G +WN + ++ + + +S + G
Sbjct: 131 WTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLK 190
Query: 66 IFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 125
+ N N+ +K + HK + + D + S D T +WD T +
Sbjct: 191 YWQNNM-----NNVKANK--TAHKESIRDLSFC-KTDLKFCSCSDDTTVKVWDFTKCVDE 242
Query: 126 SVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVN 185
S +GH DV S+ + + S + VSG D +LWDTR + R + + HGH+ V
Sbjct: 243 SSL-----TGHGWDVKSVDWHPTKS-LLVSGGKDQLVKLWDTR-SGRELCSLHGHKNIVL 295
Query: 186 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLF- 244
+VK+ +GN T S D +L+DIRT +LQ + D VTS+A+ F
Sbjct: 296 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKD-----VTSLAWHPCHEEYFV 350
Query: 245 AGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+G S+G W + + N+H+ + L G LC+GS D K W
Sbjct: 351 SGSSDGSICHWIVGHENPQI---EIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 404
>AT3G15980.3 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G + +WN T T + ++ V + F P Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMYIRVYNYNT-------MDKVKVFEAHSDYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TGLR-TSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G T +F GH+ V+ + N + F S S D T ++W+ T
Sbjct: 130 NGWACTQIF-----EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H+ VN V +F G++ TGSDD T +++D +T +Q D +V+++ F
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-----DGHTHNVSAVCFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>AT3G15980.2 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5412015-5418313 REVERSE
Length = 918
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G + +WN T T + ++ V + F P Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMYIRVYNYNT-------MDKVKVFEAHSDYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TGLR-TSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G T +F GH+ V+ + N + F S S D T ++W+ T
Sbjct: 130 NGWACTQIF-----EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H+ VN V +F G++ TGSDD T +++D +T +Q D +V+++ F
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-----DGHTHNVSAVCFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>AT3G15980.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr3:5411699-5418313 REVERSE
Length = 909
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G + +WN T T + ++ V + F P Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMYIRVYNYNT-------MDKVKVFEAHSDYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TGLR-TSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G T +F GH+ V+ + N + F S S D T ++W+ T
Sbjct: 130 NGWACTQIF-----EGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H+ VN V +F G++ TGSDD T +++D +T +Q D +V+++ F
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-----DGHTHNVSAVCFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 77 GNLPVSK------MLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 130
GN+P+ K L GH +S ++ D + L ++S D+T +LW T +
Sbjct: 25 GNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNL-LASASVDKTMILWSATNYSLIHRY-- 81
Query: 131 EFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFF 190
GH++ + ++ + S S S S D T R+WD R ++ GH V V F
Sbjct: 82 ---EGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 191 PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNG 250
P N +GS D T R+++++TG +++ +P ++S+ F+ G L+ + +G
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAH----SMP-ISSVHFNRDGSLIVSASHDG 192
Query: 251 DCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKI--WAFGGHRK 308
C +WD A+ L +L + +S S +G + + D+ LK+ +A G K
Sbjct: 193 SCKIWD---AKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK 249
Query: 309 V 309
V
Sbjct: 250 V 250
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 135/300 (45%), Gaps = 21/300 (7%)
Query: 4 LDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSV 63
+ ++++ N + SAS D +I+W+A H + + + A+S D
Sbjct: 49 VKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCT 108
Query: 64 CSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGL 123
I++ SP + K+L GH +V + P + +++ S D+T +W++ TG
Sbjct: 109 LRIWDARSPYE------CLKVLRGHTNFVFCVNFNPPSNL-IVSGSFDETIRIWEVKTGK 161
Query: 124 RTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGD 183
+ H+ + S+ N S + VS S D + ++WD + +
Sbjct: 162 CVRMI-----KAHSMPISSVHFNRDGS-LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA 215
Query: 184 VNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSIS-GRL 242
V+ KF P+G + D T +L + TG L+VY N+V +TS AFS++ G+
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH--TNKVFCITS-AFSVTNGKY 272
Query: 243 LFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSY-DTNLKIW 301
+ +G + Y+WD L A+ +L +SC + + S+ +G++ D ++IW
Sbjct: 273 IVSGSEDNCVYLWD-LQARNILQRLEGHTDAVISVSCHPVQNEISS--SGNHLDKTIRIW 329
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
Length = 473
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 133/339 (39%), Gaps = 59/339 (17%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQ-KTHAIKLPCAWVMTCAFSPTGQSVACGG 59
V ++ W+ + +VS S+ G + WN + + + W+ ++ P
Sbjct: 154 VLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVH------- 206
Query: 60 LDSVCSIFNLNSPTDRDGNLPVSKM--------LSGHKGYVSSCQYVPDEDTHLITSSGD 111
L S C F +S +DG+ + + LSGH V+ ++ D + T S D
Sbjct: 207 LSSPCRRFVTSS---KDGDARIWDITLKKSIICLSGHTLAVTCVKW--GGDGIIYTGSQD 261
Query: 112 QTCVLWDITTG-----------------------LRTSVF---GGEFQSGHTADVLSISI 145
T +W+ T G LRT F G ++
Sbjct: 262 CTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERY 321
Query: 146 N---GSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
N G S VSGS D T LW+ V+ + + GH+ VN V F PDG + S D
Sbjct: 322 NKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFD 381
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQV 262
+ RL++ TG + V+ G V +++S RLL +G + +W+ ++
Sbjct: 382 KSVRLWNGITGQFVTVFRGHVGP-----VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL 436
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+L H + + S DG + +G D LK+W
Sbjct: 437 KQDL----PGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 136/345 (39%), Gaps = 67/345 (19%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V + ++ + ++ S S D + +W+ T K WV+T A+SP G+ + G
Sbjct: 112 VLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSK 171
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHL-------ITSSGDQT 113
+N + G L S L+GHK +++ + P HL +TSS D
Sbjct: 172 SGEICCWN-----PKKGELEGSP-LTGHKKWITGISWEP---VHLSSPCRRFVTSSKDGD 222
Query: 114 CVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRA 173
+WDIT L+ S+ SGHT V + G + +GS D T ++W+T +
Sbjct: 223 ARIWDIT--LKKSII---CLSGHTLAVTCVKWGGDG--IIYTGSQDCTIKMWET-TQGKL 274
Query: 174 VRTFHGHEGDVNAVKF-----------------FPDG------------------NRFGT 198
+R GH +N++ +P R +
Sbjct: 275 IRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVS 334
Query: 199 GSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 258
GSDD T L++ Q + H V + FS G+ + + + +W+ +
Sbjct: 335 GSDDFTMFLWEPSVSKQPKKRLTGHQQ----LVNHVYFSPDGKWIASASFDKSVRLWNGI 390
Query: 259 LAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
Q V ++ H G + + SAD L +GS D+ LKIW
Sbjct: 391 TGQFV----TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 168 RVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNE 227
R +R +T GH V V F PDG + +GS D T RL+D+ T L + G
Sbjct: 96 RPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPL---FTCKGHKN 152
Query: 228 VPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLG-----L 282
V ++A+S G+ L +G +G+ W+ ++ GS H+ I+ + L
Sbjct: 153 --WVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELE---GSPLTGHKKWITGISWEPVHL 207
Query: 283 SADGSALCTGSYDTNLKIWAFGGHRKVI 310
S+ T S D + +IW + +I
Sbjct: 208 SSPCRRFVTSSKDGDARIWDITLKKSII 235
>AT1G11160.1 | Symbols: | nucleotide binding | chr1:3733406-3739363
FORWARD
Length = 1021
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 87 GHKGYVSSCQYVPDEDTHLITSSGDQTCV-LWDITTGLRTSVFGGEFQSGHTADVLSISI 145
H G V+ C + + + L+ + GD V LW I G TS GHT+ V S++
Sbjct: 13 AHSGNVN-CLSIGKKTSRLLLTGGDDYKVNLWSI--GKTTSPMS---LCGHTSPVDSVAF 66
Query: 146 NGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTC 205
N S + ++G+ +LWD S+ VR F GH + +AV+F P G +GS D
Sbjct: 67 N-SEEVLVLAGASSGVIKLWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNL 124
Query: 206 RLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLN 265
R++D R +Q Y+ H +++I FS GR + +G + VWD +++
Sbjct: 125 RVWDTRKKGCIQT-YKGHTRG----ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 266 LGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
HEG I L L TGS D +K W
Sbjct: 180 F----KCHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 78 NLPVSKMLSGHKGYVSSCQYVPDEDTH-----LITSSGDQTCVLWDITTGLRTSVFGGEF 132
+L SKM+ G+ S+C V + H L + S D +WD G
Sbjct: 86 DLEESKMVRAFTGHRSNCSAV---EFHPFGEFLASGSSDTNLRVWDTRKK-------GCI 135
Query: 133 QS--GHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFF 190
Q+ GHT + +I + R VSG D+ ++WD A + + F HEG + ++ F
Sbjct: 136 QTYKGHTRGISTIEFS-PDGRWVVSGGLDNVVKVWDL-TAGKLLHEFKCHEGPIRSLDFH 193
Query: 191 PDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNG 250
P TGS D T + +D+ T + E V +IAF G+ LF G +G
Sbjct: 194 PLEFLLATGSADRTVKFWDLETFELIGTTRP-----EATGVRAIAFHPDGQTLFCGLDDG 248
Query: 251 -DCYVWDTLLAQVVLNLG 267
Y W+ ++ + +++G
Sbjct: 249 LKVYSWEPVICRDGVDMG 266
>AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin p80
subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1180
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 94 SCQYVPDEDTHLITSSGDQTCV-LWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRM 152
+C + + + L + GD V LW I G TS+ GHT+ V S++ + S+ +
Sbjct: 19 NCLSIGKKTSRLFITGGDDYKVNLWAI--GKPTSLMS---LCGHTSAVDSVAFD-SAEVL 72
Query: 153 FVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
++G+ +LWD A + VR F GH + +AV+F P G +GS D +++DIR
Sbjct: 73 VLAGASSGVIKLWDVEEA-KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 213 GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNS 272
+Q Y+ H +++I F+ GR + +G + VWD +++
Sbjct: 132 KGCIQT-YKGHSRG----ISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF----KF 182
Query: 273 HEGRISCLGLSADGSALCTGSYDTNLKIW 301
HEG I L L TGS D +K W
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 29/224 (12%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
+ +GH+ S+ ++ P + L + S D +WDI + GH+ + +
Sbjct: 94 RAFTGHRSNCSAVEFHPFGE-FLASGSSDANLKIWDIRKKGCIQTY-----KGHSRGIST 147
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
I R VSG D+ ++WD A + + F HEG + ++ F P TGS D
Sbjct: 148 IRFT-PDGRWVVSGGLDNVVKVWDL-TAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSAD 205
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDN--EVPHVTSIAFSISGRLLFAGYSNG-DCYVWDTLL 259
T + +D+ T ++ G E V SI F GR LF G + Y W+ ++
Sbjct: 206 RTVKFWDLET-------FELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVYSWEPVV 258
Query: 260 AQVVLNLGSLQNSHEGRISCLG--LSADGSALCTGSYDTNLKIW 301
+++G S LG ++G L Y ++ IW
Sbjct: 259 CHDGVDMG---------WSTLGDLCISEGKLLGCSYYQNSVGIW 293
>AT2G43770.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:18134272-18135303 REVERSE
Length = 343
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 84 MLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSI 143
+LSGH V + ++ P T + + S D+ LW + + + GH +L +
Sbjct: 48 LLSGHPSAVYTMKFNP-AGTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDL 102
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFG-TGSDD 202
S++ VS S D T R WD + ++ H VN+ G +GSDD
Sbjct: 103 HWTSDGSQI-VSASPDKTVRAWDVETG-KQIKKMAEHSSFVNSCCPTRRGPPLIISGSDD 160
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQV 262
GT +L+D+R +Q + ++ +T+++FS + +F G + D VWD +
Sbjct: 161 GTAKLWDMRQRGAIQTFPDKY------QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEA 214
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ L H+ I+ + LS DGS L T D L +W
Sbjct: 215 TMTL----EGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 116/272 (42%), Gaps = 25/272 (9%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V T F+P G +A G D ++ ++ G+ +L GHK + + D
Sbjct: 56 VYTMKFNPAGTLIASGSHDREIFLWRVH------GDCKNFMVLKGHKNAILDLHWTSD-G 108
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+ ++++S D+T WD+ TG + + H++ V S + +SGS D TA
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKM-----AEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 163 RLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ 222
+LWD R A++TF + + AV F ++ TG D +++D+R G + + +
Sbjct: 164 KLWDMRQRG-AIQTF-PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG-EATMTLEG 220
Query: 223 HGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQ-----VVLNLGSLQNSHEGRI 277
H D +T ++ S G L + VWD V + G N + +
Sbjct: 221 HQDT----ITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 278 SCLGLSADGSALCTGSYDTNLKIWAFGGHRKV 309
C S DG+ + GS D + IW R +
Sbjct: 277 KC-SWSPDGTKVTAGSSDRMVHIWDTTSRRTI 307
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
K ++ H +V+SC +I+ S D T LWD+ F ++Q + +
Sbjct: 132 KKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ------ITA 185
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
+S + ++ ++F +G D+ ++WD R A T GH+ + + PDG+ T D
Sbjct: 186 VSFSDAADKIF-TGGVDNDVKVWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMD 243
Query: 203 GTCRLFDIR---TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLL 259
++D+R ++ ++ H N ++ ++S G + AG S+ ++WDT
Sbjct: 244 NKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTS 303
Query: 260 AQVVLNL 266
+ + L
Sbjct: 304 RRTIYKL 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTC-AFSPTGQSVACGGLDSVCSIFNLNS 71
I+S S DG +W+ Q+ P + +T +FS + GG+D+ +++L
Sbjct: 154 IISGSDDGTAKLWDM--RQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDL-- 209
Query: 72 PTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLR----TSV 127
R G + L GH+ ++ PD ++L+T+ D +WD+ +
Sbjct: 210 ---RKGE--ATMTLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDMRPYAPQNRCVKI 263
Query: 128 FGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAV 187
F G Q ++L S + +++ +GS D +WDT + R + GH G VN
Sbjct: 264 FEGH-QHNFEKNLLKCSWSPDGTKV-TAGSSDRMVHIWDT-TSRRTIYKLPGHTGSVNEC 320
Query: 188 KFFPDGNRFGTGSDDGTCRLFDI 210
F P G+ S D L +I
Sbjct: 321 VFHPTEPIIGSCSSDKNIYLGEI 343
>AT1G52360.1 | Symbols: | coatomer protein complex, subunit beta 2
(beta prime), putative | chr1:19499282-19505397 FORWARD
Length = 926
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G L +WN T + ++ V + F Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMYIRVYNYNT-------MDKVKVFEAHSDYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TGLR-TSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G T +F GH+ V+ ++ N + F S S D T ++W+ T
Sbjct: 130 KGWACTQIF-----EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H+ VN V +F G++ TGSDD T +++D +T +Q + H N V+++ F
Sbjct: 184 HQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT-LEGHTHN----VSAVCFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 16/254 (6%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S + + + +V+ + D + V+N T K + ++ A PT V
Sbjct: 60 VRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D + ++ D + +++ GH YV + P + ++S D+T +W++
Sbjct: 120 DMLIKLW------DWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
+ + + D + G ++GS D TA++WD + S V+T GH
Sbjct: 174 SPDPNFTLDAHQKGVNCVDYFT----GGDKPYLITGSDDHTAKVWDYQTKS-CVQTLEGH 228
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
+V+AV F P+ TGS+DGT R++ H + + + V +I + S
Sbjct: 229 THNVSAVCFHPELPIIITGSEDGTVRIW-----HATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 241 RLLFAGYSNGDCYV 254
R + GY G V
Sbjct: 284 RRVVIGYDEGTIMV 297
>AT1G79990.5 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 912
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G L +WN T + + V + F Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMFIRVYNYNT-------MDKIKVFEAHADYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TG-LRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G L T +F GH+ V+ ++ N + F S S D T ++W+ T
Sbjct: 130 KGWLCTQIF-----EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H VN V +F G++ TGSDD T +++D +T +Q + H N V++++F
Sbjct: 184 HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT-LEGHTHN----VSAVSFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>AT1G79990.3 | Symbols: | protein binding / structural molecule |
chr1:30085910-30091949 FORWARD
Length = 920
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G L +WN T + + V + F Q V G
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGAD 77
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 78 DMFIRVYNYNT-------MDKIKVFEAHADYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 121 TG-LRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G L T +F GH+ V+ ++ N + F S S D T ++W+ T
Sbjct: 130 KGWLCTQIF-----EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 183
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H VN V +F G++ TGSDD T +++D +T +Q + H N V++++F
Sbjct: 184 HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT-LEGHTHN----VSAVSFH 238
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
>AT1G79990.1 | Symbols: | protein binding / structural molecule |
chr1:30084522-30091949 FORWARD
Length = 1135
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 22/258 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V S+D I+++ G L +WN T + + V + F Q V G
Sbjct: 233 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGAD 292
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D ++N N+ + K+ H Y+ C V ++++SS D LWD
Sbjct: 293 DMFIRVYNYNT-------MDKIKVFEAHADYI-RCVAVHPTLPYVLSSSDDMLIKLWDWE 344
Query: 121 TG-LRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHG 179
G L T +F GH+ V+ ++ N + F S S D T ++W+ T
Sbjct: 345 KGWLCTQIF-----EGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-TLDA 398
Query: 180 HEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
H VN V +F G++ TGSDD T +++D +T +Q + H N V++++F
Sbjct: 399 HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQT-LEGHTHN----VSAVSFH 453
Query: 238 ISGRLLFAGYSNGDCYVW 255
++ G +G +W
Sbjct: 454 PELPIIITGSEDGTVRIW 471
>AT4G15900.1 | Symbols: PRL1 | PRL1 (PLEIOTROPIC REGULATORY LOCUS
1); basal transcription repressor/ nucleotide binding /
protein binding | chr4:9023775-9027443 FORWARD
Length = 486
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
+++ GH G+V S + P + T S D+T +WD+ TG+ +GH V
Sbjct: 170 RVIQGHLGWVRSVAFDPSNE-WFCTGSADRTIKIWDVATGVLKLTL-----TGHIEQVRG 223
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
++++ + MF +G D + WD ++ +R++HGH V + P + TG D
Sbjct: 224 LAVSNRHTYMFSAGD-DKQVKCWDLE-QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRD 281
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQV 262
CR++DIRT ++Q++ DN V S+ + + G + WD +
Sbjct: 282 SVCRVWDIRT--KMQIFALSGHDNT---VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKT 336
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKI 300
+ L H+ + + L +A + S D K
Sbjct: 337 MSTL----THHKKSVRAMTLHPKENAFASASADNTKKF 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 116/301 (38%), Gaps = 57/301 (18%)
Query: 42 WVMTCAFSPTGQSVACGGLDSVCSIFN---------LNSPTDRDGNLPVS---------- 82
WV + AF P+ + G D I++ L ++ L VS
Sbjct: 178 WVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAG 237
Query: 83 -------------KMLSGHKGYVSSCQYV---PDEDTHLITSSGDQTCVLWDITTGLRTS 126
K++ + G++S + P D L+T D C +WDI T ++
Sbjct: 238 DDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDV-LLTGGRDSVCRVWDIRTKMQIF 296
Query: 127 VFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNA 186
SGH V S+ + ++ V+GS D+T + WD R + + T H+ V A
Sbjct: 297 AL-----SGHDNTVCSVFTRPTDPQV-VTGSHDTTIKFWDLRYG-KTMSTLTHHKKSVRA 349
Query: 187 VKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAG 246
+ P N F + S D T + F + G Q + ++A + G ++ G
Sbjct: 350 MTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTI----INAMAVNEDG-VMVTG 403
Query: 247 YSNGDCYVWD------TLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKI 300
NG + WD ++ ++ GSL++ E I GS L T D +K+
Sbjct: 404 GDNGSIWFWDWKSGHSFQQSETIVQPGSLES--EAGIYAACYDNTGSRLVTCEADKTIKM 461
Query: 301 W 301
W
Sbjct: 462 W 462
>AT3G16650.1 | Symbols: | PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) | chr3:5671133-5675106 FORWARD
Length = 479
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
++L GH G+V S + P + T S D+T +WD+ TG+ +GH V
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEW-FCTGSADRTIKIWDVATGVLKLTL-----TGHIGQVRG 217
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
++++ + MF +G D + WD ++ +R++HGH V + P + TG D
Sbjct: 218 LAVSNRHTYMFSAGD-DKQVKCWDLE-QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRD 275
Query: 203 GTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQV 262
CR++DIRT ++Q++ H + V S+ + + G + WD +
Sbjct: 276 SVCRVWDIRT--KMQIFVLPHDSD----VFSVLARPTDPQVITGSHDSTIKFWDLRYGK- 328
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLK 299
++ ++ N H+ + + L + + S D N+K
Sbjct: 329 --SMATITN-HKKTVRAMALHPKENDFVSASAD-NIK 361
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 42 WVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDE 101
WV + AF P+ + G D I+++ + G L ++ L+GH G V V +
Sbjct: 172 WVRSVAFDPSNEWFCTGSADRTIKIWDVAT-----GVLKLT--LTGHIGQVRGLA-VSNR 223
Query: 102 DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDST 161
T++ ++ D+ WD+ + GH V ++++ + + ++G DS
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSY-----HGHLHGVYCLALHPTLD-VVLTGGRDSV 277
Query: 162 ARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 216
R+WD R + H+ DV +V P + TGS D T + +D+R G +
Sbjct: 278 CRVWDIRTKMQIF--VLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSM 330
>AT2G33340.2 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 525
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 80/335 (23%)
Query: 25 WNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKM 84
+ L+S H P M S +A GG+D+ +F DR +S
Sbjct: 209 FTQLSSHPLHKTNKPGICSMDILHS--KDVIATGGVDATAVLF------DRPSGQILS-T 259
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSG-----HTAD 139
L+GH V+S ++V D D ++T+S D+T +W + G + G H+A+
Sbjct: 260 LTGHSKKVTSVKFVGDSDL-VLTASADKTVRIW-------RNPGDGNYACGYTLNDHSAE 311
Query: 140 VLSISINGSSSRMFVSGSCD---------------------------------------- 159
V +++++ +++ FVS S D
Sbjct: 312 VRAVTVH-PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGT 370
Query: 160 ----STARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 215
S ++WD + + + F GH G+V A+ F +G T ++DG RL+D+R
Sbjct: 371 GTSQSVVKIWDVKSQANVAK-FDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
Query: 216 LQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNL-GSLQN-SH 273
+ + + S+ F SG L G + D V+ T + NL +L + S
Sbjct: 429 FKSFLSADAN-------SVEFDPSGSYL--GIAASDIKVYQTASVKAEWNLIKTLPDLSG 479
Query: 274 EGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRK 308
G+ +C+ +D + GS D NL+I+ G K
Sbjct: 480 TGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEK 514
>AT2G33340.1 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 525
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 135/335 (40%), Gaps = 80/335 (23%)
Query: 25 WNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKM 84
+ L+S H P M S +A GG+D+ +F DR +S
Sbjct: 209 FTQLSSHPLHKTNKPGICSMDILHS--KDVIATGGVDATAVLF------DRPSGQILS-T 259
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSG-----HTAD 139
L+GH V+S ++V D D ++T+S D+T +W + G + G H+A+
Sbjct: 260 LTGHSKKVTSVKFVGDSDL-VLTASADKTVRIW-------RNPGDGNYACGYTLNDHSAE 311
Query: 140 VLSISINGSSSRMFVSGSCD---------------------------------------- 159
V +++++ +++ FVS S D
Sbjct: 312 VRAVTVH-PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGT 370
Query: 160 ----STARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 215
S ++WD + + + F GH G+V A+ F +G T ++DG RL+D+R
Sbjct: 371 GTSQSVVKIWDVKSQANVAK-FDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRN 428
Query: 216 LQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNL-GSLQN-SH 273
+ + + S+ F SG L G + D V+ T + NL +L + S
Sbjct: 429 FKSFLSADAN-------SVEFDPSGSYL--GIAASDIKVYQTASVKAEWNLIKTLPDLSG 479
Query: 274 EGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRK 308
G+ +C+ +D + GS D NL+I+ G K
Sbjct: 480 TGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEK 514
>AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 C); nucleotide binding |
chr3:6211109-6212371 REVERSE
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 40/315 (12%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPTGQSVACGGLDSVCSIF 67
IV+AS+D +I+W K++ + +V S GQ G D ++
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 68 NLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV 127
+L + ++ GH V S + D + ++++S D+T LW+ + ++
Sbjct: 91 DLATG-------ETTRRFVGHTKDVLSVAFSTD-NRQIVSASRDRTIKLWNTLGECKYTI 142
Query: 128 FGGEFQSGHTADVLSISINGSS-SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNA 186
G+ GH V + + ++ VS S D T ++W+ + + + GH G +N
Sbjct: 143 SEGD---GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ-NCKLRNSLVGHSGYLNT 198
Query: 187 VKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAG 246
V PDG+ +G DG L+D+ G +L Y + G + H S+ FS + L A
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLEAG--SIIH--SLCFSPNRYWLCAA 252
Query: 247 YSNGDCYVWD----TLLAQVVLNLGSLQNSHEGRI-----------SCLGLSADGSALCT 291
N +WD +++ + ++L S +EG + + L SADGS L +
Sbjct: 253 TENS-IRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFS 311
Query: 292 GSYDTNLKIWAFGGH 306
G D +++W G +
Sbjct: 312 GYTDGVVRVWGIGRY 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 13/234 (5%)
Query: 79 LPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 138
L + ++ H V++ D ++T+S D++ +LW +T ++ +GH+
Sbjct: 5 LVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSH 64
Query: 139 DVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGT 198
V + ++ S + +SGS D RLWD R F GH DV +V F D + +
Sbjct: 65 FVEDVVLS-SDGQFALSGSWDGELRLWDL-ATGETTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 199 GSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 258
S D T +L++ + Y GD V+ + FS + + ++ WD
Sbjct: 123 ASRDRTIKLWNTLGECK---YTISEGDGHKEWVSCVRFSPNTLVPTIVSAS-----WDKT 174
Query: 259 LAQVVLNLGSLQNS---HEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRKV 309
+ L L+NS H G ++ + +S DGS +G D + +W +K+
Sbjct: 175 VKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 51/260 (19%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLP--CAWVMTCAFSPTG--QSVA 56
V S+ ++++ +IVSAS+D + +WN L K + WV FSP ++
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIV 167
Query: 57 CGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSG-DQTCV 115
D ++NL N + L GH GY+++ P D L S G D +
Sbjct: 168 SASWDKTVKVWNLQ-------NCKLRNSLVGHSGYLNTVAVSP--DGSLCASGGKDGVIL 218
Query: 116 LWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVR 175
LWD+ G + ++G L S N R ++ + +++ R+WD + S++V
Sbjct: 219 LWDLAEGKKLY----SLEAGSIIHSLCFSPN----RYWLCAATENSIRIWD--LESKSVV 268
Query: 176 TFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIA 235
E +K + N G G TG+Q +V Y TS+
Sbjct: 269 -----EDLKVDLKSEAEKNEGGVG------------TGNQKKVIY----------CTSLN 301
Query: 236 FSISGRLLFAGYSNGDCYVW 255
+S G LF+GY++G VW
Sbjct: 302 WSADGSTLFSGYTDGVVRVW 321
>AT1G10580.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:3491560-3493665 REVERSE
Length = 573
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 134 SGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDG 193
SGHT V +I + +S D ++WD + + +RT+ GH V + F DG
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDG 338
Query: 194 NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGR-LLFAGYSNGDC 252
++F T D + +D TG + + ++P+V + + +L AG S+
Sbjct: 339 SKFLTAGYDKNIKYWDTETGQVISTF----STGKIPYVVKLNPDDDKQNILLAGMSDKKI 394
Query: 253 YVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFG 304
WD +V + H G ++ + + T S D +L++W FG
Sbjct: 395 VQWDINTGEVTQEY----DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 26/295 (8%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLPCAW-VMTCAFSPTGQSVACGGLDSVCSIFNLNS 71
++SA D ++ +W+ S K + A V FS G G D +
Sbjct: 298 LLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYW---- 353
Query: 72 PTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSG--DQTCVLWDITTGLRTSVFG 129
D + +S +G YV + PD+D I +G D+ V WDI TG T +
Sbjct: 354 --DTETGQVISTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEY- 408
Query: 130 GEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKF 189
H V +I+ ++R FV+ S D + R+W+ + H + ++
Sbjct: 409 ----DQHLGAVNTITF-VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISV 463
Query: 190 FPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSN 249
P+GN S D ++ R QL + G + + FS GR + +G
Sbjct: 464 HPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 523
Query: 250 GDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLS---ADGSALCTGSYDTNLKIW 301
G C+ WD +V L H G C+G + S + T +D +K W
Sbjct: 524 GKCWFWDWKSCKVFRTL----KCHNG--VCIGAEWHPLEQSKVATCGWDGLIKYW 572
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18413690-18415223 FORWARD
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
K L GH Y + P + +++ S D+T +WD+TTG V H+ V +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNM-IVSGSFDETVRIWDVTTGKCLKVL-----PAHSDPVTA 160
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEG-DVNAVKFFPDGNRFGTGSD 201
+ N S + VS S D R+WD+ V+T E V+ V+F P+G G+
Sbjct: 161 VDFNRDGS-LIVSSSYDGLCRIWDSGTG-HCVKTLIDDENPPVSFVRFSPNGKFILVGTL 218
Query: 202 DGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSIS-GRLLFAGYSNGDCYVWDTLLA 260
D T RL++I + L+ Y G + S AFS++ G+ + +G + ++W+
Sbjct: 219 DNTLRLWNISSAKFLKTYT---GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSK 275
Query: 261 QVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+++ L H + + + + +GS D ++IW
Sbjct: 276 KLLQKL----EGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 148 SSSRMFVSGSCDSTARLWDTRVA----SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDG 203
S R+ S S D T R + + V+ F GHE ++ V F D + SDD
Sbjct: 34 SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDK 93
Query: 204 TCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVV 263
T +L+D+ TG ++ + + F+ ++ +G + +WD + +
Sbjct: 94 TLKLWDVETGSLIKTLIGHTN-----YAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCL 148
Query: 264 LNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFG-GH 306
L + H ++ + + DGS + + SYD +IW G GH
Sbjct: 149 KVLPA----HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide
binding | chr1:6222325-6223901 FORWARD
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 41/316 (12%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPTGQSVACGGLDSVCSIF 67
IVSAS+D +I+W K + + +V S GQ G D ++
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 68 NLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV 127
+L + ++ GH V S + D + ++++S D+T LW+ + ++
Sbjct: 91 DLAAGVS-------TRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTI 142
Query: 128 -FGGEFQSGHTADVLSISINGSSSR-MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVN 185
GGE GH V + + ++ + VS S D T ++W+ + T GH G V+
Sbjct: 143 SEGGE---GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS-NCKLRSTLAGHTGYVS 198
Query: 186 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFA 245
V PDG+ +G DG L+D+ G +L Y N V H ++ FS + L A
Sbjct: 199 TVAVSPDGSLCASGGKDGVVLLWDLAEGKKL---YSLEA-NSVIH--ALCFSPNRYWLCA 252
Query: 246 GYSNGDCYVWDTLLAQVVLNLG-SLQNSHEGR------------ISC--LGLSADGSALC 290
+G +WD +V +L L+ E I C L SADGS L
Sbjct: 253 ATEHG-IKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF 311
Query: 291 TGSYDTNLKIWAFGGH 306
+G D +++W G +
Sbjct: 312 SGYTDGVIRVWGIGRY 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 12/234 (5%)
Query: 79 LPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 138
L + + H V++ D ++++S D++ +LW +T + +GH+
Sbjct: 5 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH 64
Query: 139 DVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGT 198
V + ++ S + +SGS D RLWD A + R F GH DV +V F D + +
Sbjct: 65 FVEDVVLS-SDGQFALSGSWDGELRLWDL-AAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 199 GSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS---ISGRLLFAGYSNGDCYVW 255
S D T +L++ T + + + G+ V+ + FS + ++ A + + VW
Sbjct: 123 ASRDRTIKLWN--TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-DKTVKVW 179
Query: 256 DTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRKV 309
+ + L S H G +S + +S DGS +G D + +W +K+
Sbjct: 180 NLSNCK----LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 229
>AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 B); nucleotide binding |
chr1:17981977-17983268 REVERSE
Length = 326
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 40/315 (12%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPTGQSVACGGLDSVCSIF 67
IV++S+D +I+W K++ + +V S GQ G D ++
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 68 NLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV 127
+L + ++ GH V S + D + ++++S D+T LW+ + ++
Sbjct: 91 DLATGES-------TRRFVGHTKDVLSVAFSTD-NRQIVSASRDRTIKLWNTLGECKYTI 142
Query: 128 FGGEFQSGHTADVLSISINGSS-SRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNA 186
+ GH V + + ++ VS S D T ++W+ + + T GH G +N
Sbjct: 143 SEAD---GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ-NCKLRNTLAGHSGYLNT 198
Query: 187 VKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAG 246
V PDG+ +G DG L+D+ G +L Y + G + H S+ FS + L A
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKL--YSLEAG--SIIH--SLCFSPNRYWLCAA 252
Query: 247 YSNGDCYVWDTLLAQVVLNL------------GSLQNSHEGRI---SCLGLSADGSALCT 291
N +WD VV +L GS ++ ++ + L SADG+ L +
Sbjct: 253 TENS-IRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFS 311
Query: 292 GSYDTNLKIWAFGGH 306
G D +++W G +
Sbjct: 312 GYTDGVIRVWGIGRY 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 13/234 (5%)
Query: 79 LPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTA 138
L + + H V++ D ++TSS D++ +LW +T ++ +GH+
Sbjct: 5 LVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSH 64
Query: 139 DVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGT 198
V + ++ S + +SGS D RLWD + R F GH DV +V F D + +
Sbjct: 65 FVQDVVLS-SDGQFALSGSWDGELRLWDL-ATGESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 199 GSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTL 258
S D T +L++ + Y D V+ + FS + + ++ WD
Sbjct: 123 ASRDRTIKLWNTLGECK---YTISEADGHKEWVSCVRFSPNTLVPTIVSAS-----WDKT 174
Query: 259 LAQVVLNLGSLQNS---HEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRKV 309
+ L L+N+ H G ++ + +S DGS +G D + +W +K+
Sbjct: 175 VKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKL 228
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 51/260 (19%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLP--CAWVMTCAFSPTG--QSVA 56
V S+ ++++ +IVSAS+D + +WN L K + WV FSP ++
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIV 167
Query: 57 CGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSG-DQTCV 115
D ++NL N + L+GH GY+++ P D L S G D +
Sbjct: 168 SASWDKTVKVWNLQ-------NCKLRNTLAGHSGYLNTVAVSP--DGSLCASGGKDGVIL 218
Query: 116 LWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVR 175
LWD+ G + ++G L S N R ++ + +++ R+WD + S++V
Sbjct: 219 LWDLAEGKKLY----SLEAGSIIHSLCFSPN----RYWLCAATENSIRIWD--LESKSV- 267
Query: 176 TFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIA 235
+ D+ A DG+ TG G++ +V Y TS+
Sbjct: 268 -VEDLKVDLKAEAEKTDGS---TG------------IGNKTKVIY----------CTSLN 301
Query: 236 FSISGRLLFAGYSNGDCYVW 255
+S G LF+GY++G VW
Sbjct: 302 WSADGNTLFSGYTDGVIRVW 321
>AT2G32700.6 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 785
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 504 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 556
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 557 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 608
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 609 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 668
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 669 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 719
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 720 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 772
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 773 ASASHDKSVKIW 784
>AT2G32700.2 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 558
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 559 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 610
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 721
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 722 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 774
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 775 ASASHDKSVKIW 786
>AT2G32700.1 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 558
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 559 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 610
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 721
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 722 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 774
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 775 ASASHDKSVKIW 786
>AT2G32700.4 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 558
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 559 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 610
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 721
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 722 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 774
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 775 ASASHDKSVKIW 786
>AT2G32700.5 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 558
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 559 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 610
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 721
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 722 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 774
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 775 ASASHDKSVKIW 786
>AT2G32700.3 | Symbols: LUH | WD-40 repeat family protein |
chr2:13867235-13871844 FORWARD
Length = 787
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 77/312 (24%)
Query: 36 IKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSC 95
I+ + V+ C+FS G+ +A G D I+N+ + L V H ++
Sbjct: 506 IRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMET-------LQVESTPEEHAHIITDV 558
Query: 96 QYVPDEDTHLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSI--------- 143
++ P+ T L TSS D+T +WD + LRT SGH A V+SI
Sbjct: 559 RFRPNS-TQLATSSFDKTIKIWDASDPGYFLRTI-------SGHAAPVMSIDFHPKKTEL 610
Query: 144 ---------------------SINGSSSRM--------FVSGSCDSTARLWDTRVASRAV 174
++ G+S+++ F++ + ++T ++D ++ V
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRV 670
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG---HQLQVYYQQHGDNEVPHV 231
F GH +V++V + P+G + S+D +L+ + +G H+L N
Sbjct: 671 NIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSGDCIHEL--------SNSGNKF 721
Query: 232 TSIAF--SISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSAL 289
S+ F S L+ GY +W+T+ + + G HE IS L S +
Sbjct: 722 HSVVFHPSYPDLLVIGGYQ--AIELWNTMENKCMTVAG-----HECVISALAQSPSTGVV 774
Query: 290 CTGSYDTNLKIW 301
+ S+D ++KIW
Sbjct: 775 ASASHDKSVKIW 786
>AT3G18140.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6212743-6214567 REVERSE
Length = 305
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 25/225 (11%)
Query: 91 YVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSS 150
+V+ + PD+ H + ++ + L+D+ + V + HT +V+++ +
Sbjct: 37 HVNRLEITPDK--HYLAAACNPHIRLFDVNSNSPQPVMTYD---SHTNNVMAVGFQCDAK 91
Query: 151 RMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
M+ SGS D T ++WD R + + + VN V P+ +G +G R++D+
Sbjct: 92 WMY-SGSEDGTVKIWDLR--APGCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 211 RTGHQLQVYYQQHGDNEVPHVTSIAFSIS----GRLLFAGYSNGDCYVWDTLLAQVVLN- 265
R VP V + S++ G ++ A + G CYVW L + +
Sbjct: 149 RAN--------SCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTE 200
Query: 266 ---LGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHR 307
L LQ +H G I LS L T S D +KIW G +
Sbjct: 201 FEPLHKLQ-AHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFK 244
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 13 IVSASQDGRLIVWNALTSQKT-------HAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 65
+V+A+ G VW L ++T H ++ ++ C SP + +A D
Sbjct: 177 VVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVK 236
Query: 66 IFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 125
I+N+ DG + K+L+GH+ +V C + D + L+T+S D T LW + G
Sbjct: 237 IWNV------DG-FKLEKVLTGHQRWVWDCVFSVDGE-FLVTASSDMTARLWSMPAGKEV 288
Query: 126 SVFGGEFQS 134
V+ G ++
Sbjct: 289 KVYQGHHKA 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 113/300 (37%), Gaps = 22/300 (7%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 72
+ +AS D + W A T + I+ P + V +P +A + +F++NS
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLA-AACNPHIRLFDVNS- 65
Query: 73 TDRDGNLPVSKM-LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGE 131
N P M H V + + D + + S D T +WD LR E
Sbjct: 66 -----NSPQPVMTYDSHTNNVMAVGFQCDAKW-MYSGSEDGTVKIWD----LRAPGCQKE 115
Query: 132 FQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFP 191
++S + + + N + +SG + R+WD R S + + V ++
Sbjct: 116 YESVAAVNTVVLHPNQTE---LISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMW 172
Query: 192 DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVP--HVTSIAFSISGRLLFAGYSN 249
DG ++ GTC ++ + G Q ++ + H+ S + + L S+
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 250 GDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHRKV 309
+W+ L + H+ + S DG L T S D ++W+ ++V
Sbjct: 233 KTVKIWNV----DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEV 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 46/230 (20%)
Query: 13 IVSASQDGRLIVWN--ALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 70
+ S S+DG + +W+ A QK + A V T P + G
Sbjct: 93 MYSGSEDGTVKIWDLRAPGCQKEYE---SVAAVNTVVLHPNQTELISG------------ 137
Query: 71 SPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDT------------HLITSSGDQTCVLWD 118
D++GN+ V + + SC+ VP+ DT ++ ++ TC +W
Sbjct: 138 ---DQNGNIRVWDL----RANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWR 190
Query: 119 ITTGLRTSVFGGEFQ-----SGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRA 173
+ G +T EF+ H +L ++ +++ + S D T ++W+ +
Sbjct: 191 LLRGKQTMT---EFEPLHKLQAHNGHILKCLLS-PANKYLATASSDKTVKIWNVD-GFKL 245
Query: 174 VRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 223
+ GH+ V F DG T S D T RL+ + G +++VY H
Sbjct: 246 EKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
>AT1G04510.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:1226749-1230592 FORWARD
Length = 523
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 81/334 (24%)
Query: 22 LIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPV 81
L + L+S H P + M S +A GG+D+ +F DR +
Sbjct: 206 LEKFTQLSSHPLHKTNKPGIFSMDILHS--KDVIATGGIDTTAVLF------DRPSGQIL 257
Query: 82 SKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHT---- 137
S L+GH V+S ++V D D ++T+S D+T +W + G + S HT
Sbjct: 258 S-TLTGHSKKVTSIKFVGDTDL-VLTASSDKTVRIWGCSED-------GNYTSRHTLKDH 308
Query: 138 -ADVLSISINGSSSRMFVSGSCDST----------------------------------- 161
A+V +++++ ++++ FVS S DST
Sbjct: 309 SAEVRAVTVH-ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGL 367
Query: 162 ----------ARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIR 211
++WD + + + F GH G++ ++ F +G T + DG RL+D+R
Sbjct: 368 ILGTGTAQSIVKIWDVKSQANVAK-FGGHNGEITSISFSENGYFLATAALDG-VRLWDLR 425
Query: 212 TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLN-LGSLQ 270
+ + + P S+ F SG L G + D V+ + N + +L
Sbjct: 426 KLKNFRTF-------DFPDANSVEFDHSGSYL--GIAASDIRVFQAASVKAEWNPIKTLP 476
Query: 271 N-SHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+ S G+ + + D + GS D NL+I+
Sbjct: 477 DLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGL 510
>AT1G71840.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27022424-27024380 FORWARD
Length = 407
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 25/304 (8%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL 60
V L ++ + + S DG + +++A + + P A + + P G V G
Sbjct: 116 VSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSE 175
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
D CS++ N+ D++ L M SGH V+ + PD + T S D + ++W+
Sbjct: 176 D--CSLWMWNA--DKEAYL---NMFSGHNLNVTCGDFTPDGKL-ICTGSDDASLIVWNPK 227
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
T + G HT + + IN S+S + +SGS D + + + V + V + + H
Sbjct: 228 TCESIHIVKG--HPYHTEGLTCLDIN-SNSSLAISGSKDGSVHIVNI-VTGKVVSSLNSH 283
Query: 181 EGDVNAVKFFPDGNRF---GTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS 237
V VKF P TG D ++D++ H + +H + VTS+ +
Sbjct: 284 TDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ--HSTPRFICEHEEG----VTSLTWI 337
Query: 238 ISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTN 297
+ + L G +NG +WD+LL V + H+ + + +S + + + S D
Sbjct: 338 GTSKYLATGCANGTVSIWDSLLGNCV----HTYHGHQDAVQAISVSTNTDFIVSVSVDNT 393
Query: 298 LKIW 301
+++
Sbjct: 394 ARVF 397
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 134 SGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDG 193
+GH ++ +++ + + + + +G D A LW A GH+ V+ + F DG
Sbjct: 67 TGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAE-LPGHKDSVSCLAFSYDG 125
Query: 194 NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCY 253
+G DG ++FD +G V D + + + G ++ AG + +
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVL-----DGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 254 VWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+W+ + LN+ S H ++C + DG +CTGS D +L +W
Sbjct: 181 MWNAD-KEAYLNMFS---GHNLNVTCGDFTPDGKLICTGSDDASLIVW 224
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 5 DWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVC 64
D+T + I + S D LIVWN T + H +K G GL C
Sbjct: 204 DFTPDGKLICTGSDDASLIVWNPKTCESIHIVK--------------GHPYHTEGL--TC 247
Query: 65 SIFNLNSPT----DRDGNLPVSKMLSG--------HKGYVSSCQYVPDEDTHLITSSG-- 110
N NS +DG++ + +++G H V ++ P T + ++G
Sbjct: 248 LDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGM 307
Query: 111 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVA 170
D+ ++WD+ T F E + G V S++ G +S+ +G + T +WD+ +
Sbjct: 308 DKKLIIWDLQH--STPRFICEHEEG----VTSLTWIG-TSKYLATGCANGTVSIWDSLLG 360
Query: 171 SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFD 209
V T+HGH+ V A+ + + + S D T R+F+
Sbjct: 361 -NCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 35/264 (13%)
Query: 47 AFSPTGQS-VACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHL 105
A SPT + VA GG D ++ + GN + L GHK VS + D L
Sbjct: 77 ACSPTDATLVATGGGDDKAFLWKI-------GNGDWAAELPGHKDSVSCLAF--SYDGQL 127
Query: 106 ITSSG-DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARL 164
+ S G D ++D ++G V G G + + G + ++GS D + +
Sbjct: 128 LASGGLDGVVQIFDASSGTLKCVLDG---PGAGIEWVRWHPRG---HIVLAGSEDCSLWM 181
Query: 165 WDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVY----Y 220
W+ + + F GH +V F PDG TGSDD + +++ +T + + Y
Sbjct: 182 WNADKEAY-LNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY 240
Query: 221 QQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCL 280
G +T + + + L +G +G ++ + + +VV +L NSH + C+
Sbjct: 241 HTEG------LTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL----NSHTDSVECV 290
Query: 281 GLSADGSAL---CTGSYDTNLKIW 301
S + + TG D L IW
Sbjct: 291 KFSPSSATIPLAATGGMDKKLIIW 314
>AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region
(InterPro:IPR017986), WD40/YVTN repeat-like
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680);
BEST Arabidopsis thaliana protein match is: transducin
family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722
proteins in 748 species: Archae - 68; Bacteria - 7813;
Metazoa - 39755; Fungi - 16342; Plants - 8110; Viruses -
6; Other Eukaryotes - 12173 (source: NCBI BLink). |
chr5:2701448-2706910 FORWARD
Length = 839
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 85 LSGHKGYVSSCQYVPDEDTHLITS-SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSI 143
L GH + S + D L+ + + T LWD+ +GH ++ +S+
Sbjct: 55 LYGHSSGIDSVTF--DASEGLVAAGAASGTIKLWDLEEAKVVRTL-----TGHRSNCVSV 107
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDG 203
+ + F SGS D+ ++WD R + T+ GH VN ++F PDG +G +D
Sbjct: 108 NFH-PFGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHTRGVNVLRFTPDGRWIVSGGEDN 165
Query: 204 TCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVV 263
+++D+ G L + G + S+ F LL G ++ WD +++
Sbjct: 166 VVKVWDLTAGKLLHEFKSHEG-----KIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
Query: 264 LNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+ G+ + CL + DG ++ G ++ LKI+++
Sbjct: 221 GSGGTETTG----VRCLTFNPDGKSVLCGLQES-LKIFSW 255
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 77/204 (37%), Gaps = 42/204 (20%)
Query: 135 GHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGN 194
H+A V + I SSR+ V+G D LW + A+ + +GH +++V F
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-AILSLYGHSSGIDSVTFDASEG 72
Query: 195 RFGTGSDDGTCRLFDIR--------TGHQ---LQVYYQQHGD------------------ 225
G+ GT +L+D+ TGH+ + V + G+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 226 --------NEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRI 277
V + F+ GR + +G + VWD +++ SHEG+I
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF----KSHEGKI 188
Query: 278 SCLGLSADGSALCTGSYDTNLKIW 301
L L TGS D +K W
Sbjct: 189 QSLDFHPHEFLLATGSADKTVKFW 212
>AT1G15470.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5315838-5317696 FORWARD
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 12 RIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNS 71
R SAS D +WNALT + H+ + V CAFS + GG++ + IF+LN
Sbjct: 70 RAASASADFTAKIWNALTGDELHSFEHKHI-VRACAFSEDTHRLLTGGMEKILRIFDLNR 128
Query: 72 PTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDI-------TTGLR 124
P + P K + G + + +++ ++T L + + LWDI T +
Sbjct: 129 P-----DAP-PKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLETK 182
Query: 125 TSVFGGEF-QSGH---TAD-----------------------VLSISINGSSSRMFVSGS 157
+ V E Q G TAD V S S+ F++G
Sbjct: 183 SPVTSAEVSQDGRYITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGG 242
Query: 158 CDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
D +D + + GH G V+ V++ P G + +GS+DGT R++
Sbjct: 243 EDMWVHRFDFQTGEE-IGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>AT2G05720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:2147192-2148215 FORWARD
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 42/244 (17%)
Query: 46 CAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHL 105
C+ S G+ + L V ++ + T++ +L GHK +V+ + +D L
Sbjct: 69 CSLSRDGKILVTCSLSGVPKLWEVPQVTNK------IVVLKGHKEHVTDVVFSSVDDECL 122
Query: 106 ITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW 165
T+S D+T +W T G F S DS AR+W
Sbjct: 123 ATASTDRTEKIWK-TDGTLLQTFKA------------------------SSGFDSLARVW 157
Query: 166 DTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGD 225
D R A R + F GH V +V F P+G +G +D CR++D+R L +
Sbjct: 158 DLRTA-RNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAH--- 213
Query: 226 NEVPHVTSIAFSISGRLLFAGYSNG-DCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSA 284
V V+ + + R A S+ + +W +V +L HE +++ L ++
Sbjct: 214 --VNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLV----GHESKVASLDIAV 267
Query: 285 DGSA 288
D S+
Sbjct: 268 DSSS 271
>AT1G04510.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:1226749-1230592 FORWARD
Length = 523
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 81/334 (24%)
Query: 22 LIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPV 81
L + L+S H P + M S +A GG+D+ +F DR +
Sbjct: 206 LEKFTQLSSHPLHKTNKPGIFSMDILHS--KDVIATGGIDTTAVLF------DRPSGQIL 257
Query: 82 SKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHT---- 137
S L+GH V+S ++V D D ++T+S D+T +W + G + S HT
Sbjct: 258 S-TLTGHSKKVTSIKFVGDTDL-VLTASSDKTVRIWGCSED-------GNYTSRHTLKDH 308
Query: 138 -ADVLSISINGSSSRMFVSGSCDST----------------------------------- 161
A+V +++++ ++++ FVS S DST
Sbjct: 309 SAEVRAVTVH-ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGL 367
Query: 162 ----------ARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIR 211
++WD + + + F GH G++ ++ F +G T + DG RL+D+R
Sbjct: 368 ILGTGTAQSIVKIWDVKSQANVAK-FGGHNGEITSISFSENGYFLATAALDG-VRLWDLR 425
Query: 212 TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLN-LGSLQ 270
+ + + P S+ F SG L G + D V+ + N + +L
Sbjct: 426 KLKNFRTF-------DFPDANSVEFDHSGSYL--GIAASDIRVFQAASVKAEWNPIKTLP 476
Query: 271 N-SHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+ S G+ + + D + GS D NL+I+
Sbjct: 477 DLSGTGKSTSVKFGLDSKYIAVGSMDRNLRIFGL 510
>AT2G16780.1 | Symbols: MSI2, MSI02, NFC02, NFC2 | MSI2 (MULTICOPY
SUPPRESSOR OF IRA1 2) | chr2:7281615-7283583 REVERSE
Length = 415
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 10 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFN 68
N SA +DGRL++W+ T+Q H +K+ V +F+P + V A DS ++F+
Sbjct: 230 ENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFD 289
Query: 69 LNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITT------- 121
L R N P+ ++S H+G V ++ P+ +T L +S D+ ++WD+
Sbjct: 290 L-----RKLNAPL-HVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLE 343
Query: 122 -------GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW 165
G +F GH A + + N + + S + D++ ++W
Sbjct: 344 IELDAEDGPPELLFS---HGGHKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEF-QSGHTADVLSI 143
L GH + P ++ +L++ S DQ LWD++ + V F GH + + +
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGN-RFGTGSDD 202
S + + +F S D +WDTR ++ HE +VN + F P T S D
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRT-NQMQHQVKVHEREVNYLSFNPFNEWVLATASSD 282
Query: 203 GTCRLFDIR---------TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLF 244
T LFD+R + H+ +V+ + N H T +A S R L
Sbjct: 283 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDPN---HETVLASSGEDRRLM 330
>AT5G23430.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 836
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 113 TCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASR 172
T LWD+ +GH ++ +S+ + F SGS D+ ++WD R
Sbjct: 82 TIKLWDLEEAKIVRTL-----TGHRSNCISVDFH-PFGEFFASGSLDTNLKIWDIRKKG- 134
Query: 173 AVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVT 232
+ T+ GH VN ++F PDG +G +D +++D+ G L + G +
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-----QIQ 189
Query: 233 SIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTG 292
S+ F LL G ++ WD +++ + G + CL + DG + G
Sbjct: 190 SLDFHPHEFLLATGSADRTVKFWDLETFELIGSGG----PETAGVRCLSFNPDGKTVLCG 245
Query: 293 SYDTNLKIWAF 303
++ LKI+++
Sbjct: 246 LQES-LKIFSW 255
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 76/209 (36%), Gaps = 52/209 (24%)
Query: 135 GHTADVLSISINGSSSRMFVSGSCD----------------------------------- 159
H+A V + I SSR+ V+G D
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 160 -------STARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
T +LWD A + VRT GH + +V F P G F +GS D +++DIR
Sbjct: 74 VAAGAASGTIKLWDLEEA-KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 213 GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNS 272
+ Y V + F+ GR + +G + VWD +++ S
Sbjct: 133 KGCIHTY-----KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF----KS 183
Query: 273 HEGRISCLGLSADGSALCTGSYDTNLKIW 301
HEG+I L L TGS D +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>AT5G23430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 113 TCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASR 172
T LWD+ +GH ++ +S+ + F SGS D+ ++WD R
Sbjct: 82 TIKLWDLEEAKIVRTL-----TGHRSNCISVDFH-PFGEFFASGSLDTNLKIWDIRKKG- 134
Query: 173 AVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVT 232
+ T+ GH VN ++F PDG +G +D +++D+ G L + G +
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-----QIQ 189
Query: 233 SIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTG 292
S+ F LL G ++ WD +++ + G + CL + DG + G
Sbjct: 190 SLDFHPHEFLLATGSADRTVKFWDLETFELIGSGG----PETAGVRCLSFNPDGKTVLCG 245
Query: 293 SYDTNLKIWAF 303
++ LKI+++
Sbjct: 246 LQES-LKIFSW 255
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 76/209 (36%), Gaps = 52/209 (24%)
Query: 135 GHTADVLSISINGSSSRMFVSGSCD----------------------------------- 159
H+A V + I SSR+ V+G D
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
Query: 160 -------STARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
T +LWD A + VRT GH + +V F P G F +GS D +++DIR
Sbjct: 74 VAAGAASGTIKLWDLEEA-KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 213 GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNS 272
+ Y V + F+ GR + +G + VWD +++ S
Sbjct: 133 KGCIHTY-----KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF----KS 183
Query: 273 HEGRISCLGLSADGSALCTGSYDTNLKIW 301
HEG+I L L TGS D +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>AT2G22040.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:9374576-9376260 REVERSE
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 136 HTADVLSISINGSSSRMFVSGSCDSTARLWDTRV--ASRAVRTFHGHEGDVNAVKFFPDG 193
HT +V+++ + M+ SGS D + ++WD RV R R+ VN V P+
Sbjct: 83 HTKNVMAVGFQYTGHMMY-SGSEDGSVKIWDLRVRECQREFRSV----SPVNTVVLHPNQ 137
Query: 194 NRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCY 253
+G +G R++D+R + G + S+ G ++ A G CY
Sbjct: 138 TELISGDQNGNIRVWDLRADLCSCELVPEVGTP----IRSLTVMWDGTMVVAANDRGTCY 193
Query: 254 VWDTLLAQVVLN----LGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGHR 307
VW +L + + L LQ + + CL LS L T S D +KIW G +
Sbjct: 194 VWRSLCERQTMTEFEPLHKLQAHNSHILKCL-LSPGNKYLATASSDKTVKIWNLDGFK 250
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 13 IVSASQDGRLIVWNALTSQKT-------HAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 65
+V+A+ G VW +L ++T H ++ + ++ C SP + +A D
Sbjct: 183 VVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVK 242
Query: 66 IFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 125
I+NL DG + K+L+GH+ +V C + D + +L+T+S D T LW + G
Sbjct: 243 IWNL------DG-FKLEKVLTGHERWVWDCDFSMDGE-YLVTASSDTTARLWSMRAGKEE 294
Query: 126 SVFGGEFQS 134
V+ ++
Sbjct: 295 MVYQAHRKA 303
>AT5G43920.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:17673397-17675630 FORWARD
Length = 523
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 25/267 (9%)
Query: 48 FSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLIT 107
FS +G+ +A D I+ + D + + L H+ VS + PD DT L+T
Sbjct: 232 FSNSGKYLATASSDCTAIIWKVLD----DNKVELKHTLESHQNPVSFVSWSPD-DTKLLT 286
Query: 108 SSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDST--ARLW 165
+ LWD+ TG+ FG +G T V S + S+R+ V GS D +W
Sbjct: 287 CGNAEVLKLWDVDTGVLRHTFGNN-NTGFT--VSSCAWFPDSTRL-VCGSSDPERGIVMW 342
Query: 166 DTRVASRAVRTFHGHE-GDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHG 224
DT ++ + G V + PDG T D R+ ++ T + + +Q
Sbjct: 343 DT--DGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQ-- 398
Query: 225 DNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTL--LAQVVLNLGSLQNSHEGRISCLGL 282
+TS++ S G+ S + ++WD Q + G Q+ + R SC G
Sbjct: 399 -----PITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIR-SCFG- 451
Query: 283 SADGSALCTGSYDTNLKIWAFGGHRKV 309
D S + +GS D+ + IW + +
Sbjct: 452 GLDSSFIASGSEDSQVYIWNLKNTKPL 478
>AT1G73720.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:27725059-27729722 FORWARD
Length = 511
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 33 THAIKLPCAWVMTCA-FSPTGQSVACGGLDSVCSIFN-LNSPTDRDGNLPVSKMLSGHKG 90
TH IK CA FSP GQ +A +D +++ ++ +D + H
Sbjct: 205 THTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDD 264
Query: 91 YVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSS 150
V + D + L + S D +W I TG+ F H+ V S+S + S
Sbjct: 265 PVLCIDFSRDSEM-LASGSQDGKIKIWRIRTGVCIRRF-----DAHSQGVTSLSFSRDGS 318
Query: 151 RMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
++ +S S D TAR+ + + + ++ F GH VN F DG+R T S D T +++D
Sbjct: 319 QL-LSTSFDQTARIHGLK-SGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDS 376
Query: 211 RTGHQLQVY 219
+T LQ +
Sbjct: 377 KTTDCLQTF 385
>AT3G20740.1 | Symbols: FIE, FIS3, FIE1 | FIE
(FERTILIZATION-INDEPENDENT ENDOSPERM); nucleotide
binding / transcription factor/ transcription regulator
| chr3:7249064-7252254 REVERSE
Length = 369
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 109/279 (39%), Gaps = 47/279 (16%)
Query: 55 VACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTC 114
VA GG+ + + ++NS T + K L GH V+ + P + +IT+S D++
Sbjct: 101 VAAGGVKGIIRVIDVNSET-------IHKSLVGHGDSVNEIRTQPLKPQLVITASKDESV 153
Query: 115 VLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW--------- 165
LW++ TG+ +F G GH +VLS+ + S F S D+T ++W
Sbjct: 154 RLWNVETGICILIFAG--AGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEFWTYV 211
Query: 166 -------------DTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
T+ V T H V+ ++F G+ + S D L++
Sbjct: 212 EKSFTWTDDPSKFPTKFVQFPVFTASIHTNYVDCNRWF--GDFILSKSVDNEILLWE--- 266
Query: 213 GHQLQVYYQQHGDNE------VPH--VTSIAFSISGRL--LFAGYSNGDCYVWDTLLAQV 262
QL+ G ++ VP + I FS L + G G YVWD
Sbjct: 267 -PQLKENSPGEGASDVLLRYPVPMCDIWFIKFSCDLHLSSVAIGNQEGKVYVWDLKSCPP 325
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
VL N + I +S DGS + D + W
Sbjct: 326 VLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRW 364
>AT3G27640.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:10232307-10235467 FORWARD
Length = 535
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 50/238 (21%)
Query: 102 DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDST 161
D+ L+T+SGDQT +WD+ T V GHT V S+ + ++S + VSGS D
Sbjct: 140 DSCLLTASGDQTIKVWDVEENKCTGVL-----IGHTGTVKSMCSHPTNSDLLVSGSRDGC 194
Query: 162 ARLWDTRVA------------------------SRAVRTFHGHEGDVNAVKFFPDGNRFG 197
LWD R S+ +R + +V + D
Sbjct: 195 FALWDLRCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIA 254
Query: 198 T-GSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPH---------VTSIAFSISGRLLFAGY 247
T G+ D + +DIR +L+ + Q P + S++ SG L A
Sbjct: 255 TAGAPDSALKFWDIR---KLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASC 311
Query: 248 SNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCL----GLSADGSALCTGSYDTNLKIW 301
+ Y+++TL L+ G +Q+ RI +S DG + +GS D N IW
Sbjct: 312 KDNRIYLYNTLR----LDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIW 365
>AT2G47410.1 | Symbols: | nucleotide binding |
chr2:19449133-19456991 FORWARD
Length = 1520
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDG 203
+I S R ++GS D ++W A + + GHEGD+ + + + S+D
Sbjct: 242 AIFDRSGRYVITGSDDRLVKIWSMETA-LCLASCRGHEGDITDLAVSSNNALVASASNDF 300
Query: 204 TCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFS---ISGRLLFAGYSNGDCYVWDTLLA 260
R++ + G + V G VT+IAFS S L + +G C +WD +
Sbjct: 301 VIRVWRLPDGMPISVLRGHTG-----AVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYS 355
Query: 261 QVV----------LNLGSLQN-SHEGRISCLGLSADGSALCTGSYDTNLKIWA 302
Q + N GS N S +I C +A+G+ TGS D+N ++W+
Sbjct: 356 QWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWS 408
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSP 72
+++ S D + +W+ T+ + + + A S VA D V ++ L
Sbjct: 251 VITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLP-- 308
Query: 73 TDRDGNLPVSKMLSGHKGYVSSCQYVPDEDT--HLITSSGDQTCVLWD----------IT 120
DG +P+S +L GH G V++ + P + + L++SS D TC +WD
Sbjct: 309 ---DG-MPIS-VLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYV 363
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW--------DTRVASR 172
+ G + + +L + N + + +FV+GS DS AR+W D +
Sbjct: 364 PSPSDANTGSTSNASQSHQILCCAYNANGT-IFVTGSSDSNARVWSASKPNLDDAEQPTH 422
Query: 173 AVRTFHGHEGDVNAVKF 189
+ GHE DVN V+F
Sbjct: 423 ELDVLRGHENDVNYVQF 439
>AT2G26060.2 | Symbols: emb1345 | emb1345 (embryo defective 1345);
nucleotide binding | chr2:11102400-11105081 FORWARD
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 16/240 (6%)
Query: 74 DRDGNLPVSKMLSGHKGYVSSCQYVPDEDTH-------LITSSGDQTCVLWDITTGLRTS 126
+++ L + L GH V S + P +H L + SGD T +W+ ++ R+
Sbjct: 5 EKNLELVEIQKLEGHTDRVWSVAWNP-VSSHADGVSPILASCSGDNTVRIWEQSSLSRSW 63
Query: 127 VFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVN 185
+ HT V S + + S ++ + S D T +W + + T GHE +V
Sbjct: 64 TCKTVLEETHTRTVRSCAWS-PSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVK 122
Query: 186 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFA 245
+V + G+ T S D + ++++ G++ G + V + + + +LF+
Sbjct: 123 SVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQ--DVKMVQWHPTMDVLFS 180
Query: 246 GYSNGDCYVW----DTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ VW D Q V LG N H + + +A G + T S D LKIW
Sbjct: 181 CSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V +CA+SP+GQ +A D I+ + L GH+ V S +
Sbjct: 77 VRSCAWSPSGQLLATASFDGTTGIWK-----NYGSEFECISTLEGHENEVKSVSWNA-SG 130
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+ L T S D++ +W++ G +GHT DV + + + +F S S D+T
Sbjct: 131 SCLATCSRDKSVWIWEVLEGNEYDC--AAVLTGHTQDVKMVQWHPTMDVLF-SCSYDNTI 187
Query: 163 RLW---DTRVASRAVRTF----HGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
++W D + V+T +GH V ++ F G++ T SDD T +++
Sbjct: 188 KVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
>AT4G29730.1 | Symbols: NFC5, MSI5 | NFC5 (Nucleosome/chromatin
assembly factor group C 5) | chr4:14559255-14562522
REVERSE
Length = 487
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 55/253 (21%)
Query: 9 ERNRIVSASQDGRLI----------VWNALTSQKTHAI-----KLPCAWVM--------T 45
E NRI Q+ +++ +WN T +A+ P ++
Sbjct: 146 EVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFA 205
Query: 46 CAFSPTGQSVACGGLDSVCSIFNL-----------NSP----------TDRDGNLPVSK- 83
A PT V GG D ++N+ SP +D+ G V
Sbjct: 206 LAMCPTEPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPR 265
Query: 84 -MLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
+ +GHK V + P + D +LWD TG ++ + + H AD+
Sbjct: 266 GIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAM---KVEKAHDADLHC 322
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVAS-----RAVRTFHGHEGDVNAVKFFPDGNR-F 196
+ N + + ++GS D+T R++D R + V F GH V V++ PD + F
Sbjct: 323 VDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVF 382
Query: 197 GTGSDDGTCRLFD 209
G+ ++DG ++D
Sbjct: 383 GSSAEDGLLNIWD 395
>AT3G15470.1 | Symbols: | WD-40 repeat family protein |
chr3:5216630-5219868 REVERSE
Length = 883
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 104 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTAR 163
HL++SS D+T LW++++ VF H+ V I N R F+SGS D+ R
Sbjct: 526 HLLSSSMDKTVRLWNLSSQTCLKVFS------HSDYVTCIQFNPVDDRYFISGSLDAKVR 579
Query: 164 LWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 223
+W + R V ++ V + + PDG GS G+CR++ + ++LQ Q +
Sbjct: 580 VWS--IPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMYSA-SDNKLQQKSQIN 636
Query: 224 GDNEVPHVTSIAFSISGRLLFAGYS------NGDCYVWDTLLAQVVLNLGSLQNSHEGRI 277
N+ + I+G G S + D + +V L +N+ +I
Sbjct: 637 LQNKK--KKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTDLVNKLKGFRNT-SSQI 693
Query: 278 SCLGLSADGSALCTGSYDTNLKIWAF 303
S ++ADG + + S D+++ IW +
Sbjct: 694 SA-SITADGKYVVSASEDSHVYIWKY 718
>AT1G52730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:19642866-19644978 FORWARD
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 42/219 (19%)
Query: 24 VWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN----SPTDRD--- 76
+W+ALT H+ + V CAFS +S+ GG + + +F++N PT+ D
Sbjct: 87 LWDALTGDVLHSFEHKHI-VRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 77 GNLPVSKMLSGHKGYVSSCQYV---------------------P------DEDTHLITSS 109
G++ L + +SSC + P +D IT++
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTA 205
Query: 110 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRV 169
T WD + FG ++ S S+ S FV+G D R++D
Sbjct: 206 DGSTVKFWD------ANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYT 259
Query: 170 ASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
+ GH G V+ V+F P G + +GS+DGT R++
Sbjct: 260 GEE-IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>AT1G52730.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:19642866-19644978 FORWARD
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 42/219 (19%)
Query: 24 VWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN----SPTDRD--- 76
+W+ALT H+ + V CAFS +S+ GG + + +F++N PT+ D
Sbjct: 87 LWDALTGDVLHSFEHKHI-VRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSP 145
Query: 77 GNLPVSKMLSGHKGYVSSCQYV---------------------P------DEDTHLITSS 109
G++ L + +SSC + P +D IT++
Sbjct: 146 GSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTA 205
Query: 110 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRV 169
T WD + FG ++ S S+ S FV+G D R++D
Sbjct: 206 DGSTVKFWD------ANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYT 259
Query: 170 ASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
+ GH G V+ V+F P G + +GS+DGT R++
Sbjct: 260 GEE-IGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>AT2G26060.1 | Symbols: emb1345 | emb1345 (embryo defective 1345);
nucleotide binding | chr2:11102400-11105127 FORWARD
Length = 352
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 16/240 (6%)
Query: 74 DRDGNLPVSKMLSGHKGYVSSCQYVPDEDTH-------LITSSGDQTCVLWDITTGLRTS 126
+++ L + L GH V S + P +H L + SGD T +W+ ++ R+
Sbjct: 5 EKNLELVEIQKLEGHTDRVWSVAWNP-VSSHADGVSPILASCSGDNTVRIWEQSSLSRSW 63
Query: 127 VFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVN 185
+ HT V S + + S ++ + S D T +W + + T GHE +V
Sbjct: 64 TCKTVLEETHTRTVRSCAWS-PSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVK 122
Query: 186 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFA 245
+V + G+ T S D + ++++ G++ G + V + + + +LF+
Sbjct: 123 SVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQ--DVKMVQWHPTMDVLFS 180
Query: 246 GYSNGDCYVW----DTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ VW D Q V LG N H + + +A G + T S D LKIW
Sbjct: 181 CSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V +CA+SP+GQ +A D I+ + L GH+ V S +
Sbjct: 77 VRSCAWSPSGQLLATASFDGTTGIWK-----NYGSEFECISTLEGHENEVKSVSWNA-SG 130
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+ L T S D++ +W++ G +GHT DV + + + +F S S D+T
Sbjct: 131 SCLATCSRDKSVWIWEVLEGNEYDC--AAVLTGHTQDVKMVQWHPTMDVLF-SCSYDNTI 187
Query: 163 RLW---DTRVASRAVRTF----HGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
++W D + V+T +GH V ++ F G++ T SDD T +++
Sbjct: 188 KVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
>AT5G56130.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:22722755-22725065 REVERSE
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 14/220 (6%)
Query: 82 SKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVL 141
S+ GHK V S + + T L + S DQT +W+I + E + GHT V
Sbjct: 13 SREYQGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNIEPHGHSKAKDLELK-GHTDSVD 70
Query: 142 SISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSD 201
+ + S + + S D + RLWD R + + + ++N + + PDG G+
Sbjct: 71 QLCWDPKHSDLVATASGDKSVRLWDAR-SGKCTQQVELSGENIN-ITYKPDGTHVAVGNR 128
Query: 202 DGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQ 261
D + D+R + + +++ + E V IA+++ G F G V L+
Sbjct: 129 DDELTILDVR---KFKPLHRRKFNYE---VNEIAWNMPGDFFFLTTGLGTVEV----LSY 178
Query: 262 VVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
L +H C+ + G GS D+ + +W
Sbjct: 179 PSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLW 218
>AT2G21390.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr2:9152428-9156577 FORWARD
Length = 1218
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 37/260 (14%)
Query: 14 VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT 73
VS D ++ VWN T + + ++ T F + D I+N S T
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 74 DRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDI-------------- 119
+L+GH YV + P ED ++++S DQT +WDI
Sbjct: 127 -------CISVLTGHNHYVMCASFHPKEDL-VVSASLDQTVRVWDIGALKKKSASPADDL 178
Query: 120 --TTGLRTSVFGG------EFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWD-TRVA 170
+ + + +FGG GH V S + + + VSG+ D +LW
Sbjct: 179 MRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLP-LIVSGADDRQVKLWRMNETK 237
Query: 171 SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPH 230
+ V T GH +V++V F + + S+D + R++D +Q + ++H +
Sbjct: 238 AWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWI-- 295
Query: 231 VTSIAFSISGRLLFAGYSNG 250
+A LL AG+ NG
Sbjct: 296 ---LAVHPEINLLAAGHDNG 312
>AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504541-5509266 REVERSE
Length = 876
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 47 AFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLI 106
A P+ + C D +++ + + L +SK L G+ ++ +++ DE+ L
Sbjct: 317 AMLPSDHGLLCVTADQQFFFYSVVENVE-ETELVLSKRLVGYNEEIADMKFLGDEEQFLA 375
Query: 107 TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSIS--INGSSSRMFVSGSCDSTARL 164
++ + ++D+ T + V +GH VLS+ ++ S + + V+GS D T RL
Sbjct: 376 VATNLEEVRVYDVATMSCSYVL-----AGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRL 430
Query: 165 WDTRVASRAVRTFHGHEGDVNAVKFFPDG-NRFGTGSDDGTCRLFDI-----RTGHQLQV 218
W+ S + GH GD+ AV F + F +GS D T +++ + + + +
Sbjct: 431 WNATSKS-CIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINL 489
Query: 219 YYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTL-LAQVVLNLGSLQNSHEGRI 277
+ + S+A + + L+ G + +W L VV G H+ RI
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKG-----HKRRI 544
Query: 278 SCLGLSADGSALCTGSYDTNLKIWAF 303
+ S + T S D +KIWA
Sbjct: 545 FSVEFSTVDQCVMTASGDKTVKIWAI 570
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 49 SPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITS 108
S G +AC D + N+ TD V + G +++ PD D L ++
Sbjct: 28 SSDGSFIACACGD----VINIVDSTDS----SVKSTIEGESDTLTALALSPD-DKLLFSA 78
Query: 109 SGDQTCVLWDITT--GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWD 166
+ +WD+ T +R+ GH V+ ++ + S + +G+ D +WD
Sbjct: 79 GHSRQIRVWDLETLKCIRS-------WKGHEGPVMGMACHASGGLLATAGA-DRKVLVWD 130
Query: 167 TRVASRAVRTFHGHEGDVNAVKFFPDGNR--FGTGSDDGTCRLFDI---RTGHQLQVYYQ 221
F GH+G V+++ F PD N+ +GSDD T R++D+ T + +
Sbjct: 131 VD-GGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIME 189
Query: 222 QHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
+H VTSIA S G LF+ + +WD
Sbjct: 190 KH----FSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 13/218 (5%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGL-DSVCSIFNLN- 70
IV+ S+D + +WNA + ++ AF+ S G D +++L+
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDG 478
Query: 71 --SPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVF 128
++ NL +++ H ++S V D+ + T S D+T +W + +
Sbjct: 479 ISEDSEEPINLKTRSVVAAHDKDINSVA-VARNDSLVCTGSEDRTASIWRLPDLVHVVTL 537
Query: 129 GGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVK 188
GH + S+ + + + ++ S D T ++W S ++TF GH V
Sbjct: 538 -----KGHKRRIFSVEFS-TVDQCVMTASGDKTVKIWAISDGS-CLKTFEGHTSSVLRAS 590
Query: 189 FFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDN 226
F DG +F + DG +L+++ T + Y QH D
Sbjct: 591 FITDGTQFVSCGADGLLKLWNVNTSECIAT-YDQHEDK 627
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 57/273 (20%)
Query: 77 GNLPVSKMLSGHKGYVSSCQYVPDE--DTHLITSSGDQTCVLWDITTGLRTSVFGGEFQS 134
+ S +L+GHK V S + ++T S D+T LW+ T+ S G +
Sbjct: 389 ATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATS---KSCIG--VGT 443
Query: 135 GHTADVLSISINGSSSRMFVSGSCDSTARLW---------DTRVASRAVRTFHGHEGDVN 185
GH D+L+++ S FVSGS D T ++W + + + H+ D+N
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 186 AVKFFPDGNRFGTGSDDGTC---RLFDI-----RTGHQLQVYYQQH-----------GDN 226
+V + + TGS+D T RL D+ GH+ +++ + GD
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDK 563
Query: 227 EVP---------------HVTSI---AFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGS 268
V H +S+ +F G + ++G +W+ ++ + +
Sbjct: 564 TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECI----A 619
Query: 269 LQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ HE ++ L + + TG D + +W
Sbjct: 620 TYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
>AT5G53500.1 | Symbols: | WD-40 repeat family protein |
chr5:21726167-21728524 REVERSE
Length = 654
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 23/247 (9%)
Query: 61 DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDIT 120
DS C +F R P+ + GH G V + +D +L+++S D+T LW +
Sbjct: 303 DSACVVFP--PKVFRIMEKPLYE-FRGHTGEVLDISW--SKDNYLLSASMDKTVRLWKVG 357
Query: 121 TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGH 180
+ VF H + V S+ N + F+SGS D R+W+ ++ +V +
Sbjct: 358 SNDCLGVFA------HNSYVTSVQFNPVNENYFMSGSIDGKVRIWN--ISGCSVVDWADL 409
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISG 240
+ ++AV + PDG GS +G+CR F++ +G L++ Q H N+ S I+G
Sbjct: 410 KDIISAVCYRPDGQGGIIGSLNGSCRFFNM-SGEFLELDSQIHLHNK---KKSSNKRITG 465
Query: 241 RLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEG-----RISCLGLSADGSALCTGSYD 295
F V +L ++ ++G ++ L++DG + + D
Sbjct: 466 -FQFLPQEPTKVLVVSADSKVRILQGNNVVRKYKGVCKTRSLTSASLTSDGKHIVSACED 524
Query: 296 TNLKIWA 302
+N+ IW+
Sbjct: 525 SNVYIWS 531
>AT2G19540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:8461804-8464347 FORWARD
Length = 469
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 75 RDGNLPVSKM-----LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG 129
+DG PV SGHK + + P L++ LW+ +G +V
Sbjct: 204 KDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASG-SWAVDP 262
Query: 130 GEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKF 189
F +GHTA V + + + +F S S D + +WD R+ +F H DVN + +
Sbjct: 263 IPF-AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISW 321
Query: 190 FPDGNR-----FGTGSDDGTCRLFDIRT---GHQLQVYYQQHGDNEVPHVTSIAFSI-SG 240
NR +GSDDGT + D+R G + +++ H +TSI +S
Sbjct: 322 ----NRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHP----ITSIEWSAHEA 373
Query: 241 RLLFAGYSNGDCYVWDTLL 259
L + +WD L
Sbjct: 374 STLAVTSGDNQLTIWDLSL 392
>AT4G29830.1 | Symbols: VIP3 | VIP3 (vernalization independence 3);
nucleotide binding / protein binding |
chr4:14597728-14599157 FORWARD
Length = 321
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 107 TSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWD 166
+SS D ++D+ T +V ++V + + + V+G ++ +LWD
Sbjct: 77 SSSIDSFVRVFDVDTNATIAVL-----EAPPSEVWGMQFEPKGTILAVAGGSSASVKLWD 131
Query: 167 TRVASRAVRTFHGHEGD-------------VNAVKFFPDGNRFGTGSDDGTCRLFDIRTG 213
T + R + T D V +V + P+G R GS DGT +FD+
Sbjct: 132 T-ASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDV--- 187
Query: 214 HQLQVYYQQHGDNEVPHVTSIAFS-ISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNS 272
+ ++ +Q G N +P V S+ FS + R+LF+G +G + D A+ LGS+ +
Sbjct: 188 DRSKLLHQLEGHN-MP-VRSLVFSPVDPRVLFSGSDDGHVNMHD---AEGKTLLGSM-SG 241
Query: 273 HEGRISCLGLSADGSALCTGSYDTNLKIW 301
H + + S DG A+ TGS D +++W
Sbjct: 242 HTSWVLSVDASPDGGAIATGSSDRTVRLW 270
>AT2G01330.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:158417-160184 REVERSE
Length = 474
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V SP G+ GG D I++++ D NL +L H+G ++ +Y PD
Sbjct: 314 VAASVISPDGKEAIVGGQDGKLHIYSVSG----DNNLKEEAVLEKHRGALTVIRYSPDL- 368
Query: 103 THLITSSGDQTCVLWDITTG---LRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCD 159
T + ++ V+WD T L +F HTA + S++ + +++M +GS D
Sbjct: 369 TMFASGDANREAVVWDRETKQVKLNNMLF-------HTARINSLAWS-PNNKMVATGSID 420
Query: 160 STARLWDT-RVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIR 211
+ +++ + AS + + H G VNAV F D +G +D + RL+ I
Sbjct: 421 TCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSG-EDASVRLWHIE 472
>AT2G46290.1 | Symbols: | eukaryotic translation initiation factor
3 subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative | chr2:19005910-19007797 REVERSE
Length = 355
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 50 PTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSS 109
P Q++ GG D+ I++ + L S GHK ++S D D+H +T S
Sbjct: 185 PLNQTIVSGGEDAAIRIWDAETGK----LLKQSDEEVGHKEAITSLCKAAD-DSHFLTGS 239
Query: 110 GDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA------- 162
D+T LWD +RT + + V +++++ + + + G D++A
Sbjct: 240 HDKTAKLWD----MRTLTLIKTYTT--VVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHR 293
Query: 163 ------RLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRL 207
+ +DT + + GH G +NA+ F PDG F +G +DG RL
Sbjct: 294 AGKFEAKFYDT-ILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 75/281 (26%)
Query: 87 GHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQS------GHTA 138
GH G V C + + + LIT S DQT LWD+ +G L T FG +S H A
Sbjct: 77 GHSGAVWCCD-ISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLA 135
Query: 139 DVLSISINGSSS----------------------------------------RMFVSGSC 158
+ + G+SS + VSG
Sbjct: 136 VITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGE 195
Query: 159 DSTARLWDTRVASRAVRTFH--GHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQL 216
D+ R+WD ++ GH+ + ++ D + F TGS D T +L+D+RT +
Sbjct: 196 DAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLI 255
Query: 217 QVYYQQHGDNEVPHVTSIAFS-ISGRLLFAGYSNG-------------DCYVWDTLLAQV 262
+ Y V V ++A S + ++ G + + +DT+L +
Sbjct: 256 KTY------TTVVPVNAVAMSPLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQE- 308
Query: 263 VLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+G ++ H G I+ L S DG + +G D +++ F
Sbjct: 309 --EIGGVKG-HFGPINALAFSPDGKSFSSGGEDGYVRLHHF 346
>AT4G28450.1 | Symbols: | nucleotide binding / protein binding |
chr4:14061724-14064582 REVERSE
Length = 452
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 13 IVSASQDGRLIVWNALTSQKTHAIKLP--CAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 70
I SAS DG + +W+ ++S++T + P V S G + G D ++N+
Sbjct: 82 IFSASMDGDIRLWD-ISSRRT-VCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVP 139
Query: 71 SPTDRDGNLPVSKMLSGHKGYV-SSCQYVPDE--DTHLITSSGDQTCVLWDITTGLRTSV 127
P+ D ++ + YV + + D + L ++G Q DI R+
Sbjct: 140 RPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQL----DIWNHNRSQP 195
Query: 128 FGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAV 187
FQ G T V+S+ N + + + D + ++D R++S A + + N++
Sbjct: 196 VQS-FQWG-TDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTK--TNSI 251
Query: 188 KFFP-DGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAG 246
+ P + ++DG+C FD R + + ++ H V V I FS +GR G
Sbjct: 252 AWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDH----VSAVMDIDFSPTGREFVTG 307
Query: 247 YSNGDC--YVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ + ++ ++ + + +Q R+ C+ S D + + +GS DTNL++W
Sbjct: 308 SYDRSVRIFPYNGGHSREIYHTKRMQ-----RVFCVKYSCDATYVISGSDDTNLRLW 359
>AT2G34260.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:14465899-14468416 FORWARD
Length = 353
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 56/293 (19%)
Query: 48 FSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLIT 107
F P+ VA G +D ++ +S D +L + + HK + +++ D+ ++T
Sbjct: 14 FHPSTNLVAAGLIDGHLHLYRYDS----DSSLVRERKVRAHKESCRAVRFI-DDGQRIVT 68
Query: 108 SSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDT 167
+S D + + D+ TG + + ++ H D ++ IN + + + SG ++WDT
Sbjct: 69 ASADCSILATDVETGAQVA----HLENAH-EDAVNTLINVTETTI-ASGDDKGCVKIWDT 122
Query: 168 RVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNE 227
R S F+ HE ++ + F D + S DGT + ++RT Q +
Sbjct: 123 RQRS-CSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK-----VQSQSEFS 176
Query: 228 VPHVTSIAFSISGRLLFAGYSNGD--CYVW------------------DTLLAQ------ 261
+ S+ +GR + G NG Y W D LL
Sbjct: 177 EDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLI 236
Query: 262 ------VVLNLGSLQN-------SHEGRISCLGLSADGSALCTGSYDTNLKIW 301
++ +G L N SH+ I L LS D L + ++D+ LK+W
Sbjct: 237 TGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLW 289
>AT5G64730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:25873146-25875021 FORWARD
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 112/313 (35%), Gaps = 60/313 (19%)
Query: 28 LTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSG 87
L +++ H +K V+ F+ G G D ++N + + K
Sbjct: 6 LPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGI-------LIKTYKS 58
Query: 88 HKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISING 147
H V +V ++ + GD+ WD++TG F GH +V ++ N
Sbjct: 59 HGREVRDV-HVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF-----RGHDGEVNAVKFND 112
Query: 148 SSSRMFVSGSCDSTARLWDTRVASR------------------------------AVRTF 177
SSS + VS D + R+WD R S VRTF
Sbjct: 113 SSS-VVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTF 171
Query: 178 HGHEG---------DVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEV 228
G VN + DGN G D T RL D TG LQVY G
Sbjct: 172 DMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVY---KGHISK 228
Query: 229 PHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSA 288
T + S + G +G + WD + A+V+ S +H+ ++ +
Sbjct: 229 SFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVL----SKFRAHDLVVTSVSYHPKEDC 284
Query: 289 LCTGSYDTNLKIW 301
+ T S D +++W
Sbjct: 285 MLTSSVDGTIRVW 297
>AT2G19520.1 | Symbols: FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4 | FVE;
metal ion binding | chr2:8456006-8459235 FORWARD
Length = 507
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 87 GHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISIN 146
GH+ V + P + D +LWD TG + + H AD+ + N
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVT---KVEKAHDADLHCVDWN 346
Query: 147 GSSSRMFVSGSCDSTARLWDTRVAS-----RAVRTFHGHEGDVNAVKFFPDGNR-FGTGS 200
+ ++GS D+T RL+D R + + F GH+ V V++ PD + FG+ +
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 201 DDGTCRLFD 209
+DG ++D
Sbjct: 407 EDGLLNIWD 415
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 19/160 (11%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
V AFSPT C D C I R G PV+K+ H + + P +D
Sbjct: 295 VEDVAFSPTSAQEFCSVGDDSCLILW----DARTGTNPVTKVEKAHDADLHCVDWNPHDD 350
Query: 103 THLITSSGDQTCVLWD----ITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSC 158
++T S D T L+D G+ + ++ E GH A VL + + S +F S +
Sbjct: 351 NLILTGSADNTVRLFDRRKLTANGVGSPIYKFE---GHKAAVLCVQWSPDKSSVFGSSAE 407
Query: 159 DSTARLWD----TRVASRAVRT----FHGHEGDVNAVKFF 190
D +WD ++ + RA ++ F H G + V F
Sbjct: 408 DGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDF 447
>AT5G50230.1 | Symbols: | nucleotide binding |
chr5:20448632-20450855 REVERSE
Length = 509
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 42/257 (16%)
Query: 58 GGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLW 117
GG D +++ NS T + K L G G + D + +I ++ +W
Sbjct: 243 GGQDRAVKMWDTNSGT-------LIKSLYGSLGNILDMAVTHDNKS-VIAATSSNNLFVW 294
Query: 118 DITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTF 177
D+++G +GHT V ++ ++ SSR VS + D T +LWD
Sbjct: 295 DVSSGRVRHTL-----TGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL---------- 339
Query: 178 HGHEG----------DVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNE 227
H+G + NA+ DG +G DG RL+DI+TG L
Sbjct: 340 --HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS---- 393
Query: 228 VPHVTSIAFSISG-RLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADG 286
VTS++ S +G R+L +G N V+DT ++ L + N S +S D
Sbjct: 394 -SAVTSVSLSRNGNRILTSGRDNVH-NVFDTRTLEICGTLRASGNRLASNWSRSCISPDD 451
Query: 287 SALCTGSYDTNLKIWAF 303
+ GS D ++ +W+
Sbjct: 452 DYVAAGSADGSVHVWSL 468
>AT3G15610.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:5291076-5292796 REVERSE
Length = 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 37/242 (15%)
Query: 24 VWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN----SPTDRD--- 76
+W+ALT H+ + V CAFS + + GG + + +F+LN PT+ D
Sbjct: 87 LWDALTGDVLHSFEHKHI-VRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSP 145
Query: 77 GNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGH 136
G++ L G + +SSC + LWD+ +G E +S
Sbjct: 146 GSIRTLTWLHGDQTILSSCTDI-------------GGVRLWDVRSGKIVQTL--ETKSPV 190
Query: 137 TADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPD-GNR 195
T+ +S +G +++ + ST + WD + + ++ + P GN+
Sbjct: 191 TS--AEVSQDGR----YITTADGSTVKFWDAN--HFGLVKSYDMPCNIESASLEPKSGNK 242
Query: 196 FGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVW 255
F G +D RLFD TG ++ HG V + F+ +G +G +G +W
Sbjct: 243 FVAGGEDMWVRLFDFHTGKEIGCNKGHHGP-----VHCVRFAPTGESYASGSEDGTIRIW 297
Query: 256 DT 257
T
Sbjct: 298 QT 299
>AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR
INTERACTING PROTEIN 1); nucleotide binding / protein
binding | chr2:19003656-19005393 REVERSE
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
+ + P Q++ GG D V I++ + L S GHK ++S D D
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGK----LLKQSDEEVGHKKDITSLCKAAD-D 205
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+H +T S D+T LWD+ T V ++S++ + + + G D++A
Sbjct: 206 SHFLTGSLDKTAKLWDMRTLTLLK------TYTTVVPVNAVSLSPLLNHVVLGGGQDASA 259
Query: 163 -------------RLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRL 207
+ +D ++ + GH G +NA+ F PDG F +G +DG RL
Sbjct: 260 VTTTDHRAGKFEAKFYD-KILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
>AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA RECEPTOR
INTERACTING PROTEIN 1); nucleotide binding / protein
binding | chr2:19003656-19005393 REVERSE
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 43 VMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDED 102
+ + P Q++ GG D V I++ + L S GHK ++S D D
Sbjct: 151 INRAVWGPLNQTIVSGGEDKVIRIWDAETGK----LLKQSDEEVGHKKDITSLCKAAD-D 205
Query: 103 THLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
+H +T S D+T LWD+ T V ++S++ + + + G D++A
Sbjct: 206 SHFLTGSLDKTAKLWDMRTLTLLK------TYTTVVPVNAVSLSPLLNHVVLGGGQDASA 259
Query: 163 -------------RLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRL 207
+ +D ++ + GH G +NA+ F PDG F +G +DG RL
Sbjct: 260 VTTTDHRAGKFEAKFYD-KILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
>AT2G33340.3 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126703-14131000 REVERSE
Length = 485
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 76/261 (29%)
Query: 55 VACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTC 114
+A GG+D+ +F DR +S L+GH V+S ++V D D ++T+S D+T
Sbjct: 237 IATGGVDATAVLF------DRPSGQILS-TLTGHSKKVTSVKFVGDSDL-VLTASADKTV 288
Query: 115 VLWDITTGLRTSVFGGEFQSG-----HTADVLSISINGSSSRMFVSGSCD---------- 159
+W + G + G H+A+V +++++ +++ FVS S D
Sbjct: 289 RIW-------RNPGDGNYACGYTLNDHSAEVRAVTVH-PTNKYFVSASLDGTWCFYDLSS 340
Query: 160 ----------------------------------STARLWDTRVASRAVRTFHGHEGDVN 185
S ++WD + + + F GH G+V
Sbjct: 341 GSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAK-FDGHTGEVT 399
Query: 186 AVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFA 245
A+ F +G T ++DG RL+D+R + + + S+ F SG L
Sbjct: 400 AISFSENGYFLATAAEDG-VRLWDLRKLRNFKSFLSADAN-------SVEFDPSGSYL-- 449
Query: 246 GYSNGDCYVWDTLLAQVVLNL 266
G + D V+ T + NL
Sbjct: 450 GIAASDIKVYQTASVKAEWNL 470
>AT1G62020.1 | Symbols: | coatomer protein complex, subunit alpha,
putative | chr1:22919814-22923728 FORWARD
Length = 1216
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 37/260 (14%)
Query: 14 VSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT 73
VS D ++ VWN + + ++ T F + D I+N S T
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
Query: 74 DRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDI-------------- 119
+L+GH YV + P ED ++++S DQT +WDI
Sbjct: 127 -------CVSVLTGHNHYVMCASFHPKEDL-VVSASLDQTVRVWDIGALRKKTVSPADDI 178
Query: 120 --TTGLRTSVFGG------EFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWD-TRVA 170
T + + +FGG GH V + + + + VSG+ D +LW
Sbjct: 179 MRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK 237
Query: 171 SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPH 230
+ V T GH +V++V F + + S+D + R++D LQ + ++H +
Sbjct: 238 AWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWI-- 295
Query: 231 VTSIAFSISGRLLFAGYSNG 250
+A LL AG+ +G
Sbjct: 296 ---LAVHPEMNLLAAGHDSG 312
>AT3G50390.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18702137-18703546 FORWARD
Length = 469
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 139 DVLSISINGSSSRMFVSGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNAVKFFPDGNRFG 197
D +S R+ SGS D T ++W RV+ R V + + HE VNAV DG F
Sbjct: 212 DAISCLALSEDKRLLYSGSWDKTFKVW--RVSDLRCVESVNAHEDAVNAVVSGFDGLVF- 268
Query: 198 TGSDDGTCRLFDIR-TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
TGS DGT +++ + ++ + + VT+IA S L++ G S+G W+
Sbjct: 269 TGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWE 328
Query: 257 TLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
+ + G + H +++ L L A G+ + +GS D +++W
Sbjct: 329 R---ENNMKNGGVLKGH--KLAVLCLVAAGNLMFSGSADLGIRVW 368
>AT5G60940.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:24523092-24525655 FORWARD
Length = 429
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 43 VMTCA-FSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGH-------KGYVSS 94
V+ CA FSP G A GG D+ +F + V +M+SG + +
Sbjct: 125 VVRCARFSPDGMFFATGGADTSIKLFEVPK---------VKQMISGDTQARPLIRTFYDH 175
Query: 95 CQYVPDEDTH-----LITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSS 149
+ + D D H LI+S+ D +D + F FQ H +V SIS + S
Sbjct: 176 AEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFK-VFQDTH--NVRSISFH-PS 231
Query: 150 SRMFVSGSCDSTARLWDTRVASRAVRTFH----------GHEGDVNAVKFFPDGNRFGTG 199
++G+ L+D V T+ G G +N V++ G+ + T
Sbjct: 232 GEFLLAGTDHPIPHLYD-------VNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITA 284
Query: 200 SDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
S DG RLFD + ++ HG +E VTS F+ R + + + +W+
Sbjct: 285 SKDGAIRLFDGVSAKCVRSIGNAHGKSE---VTSAVFTKDQRFVLSSGKDSTVKLWE 338
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 67 FNLNSPTDRDGNLPV--SKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLR 124
F++N +P SK LS HK V ++ PD T D + L+++
Sbjct: 99 FSVNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPD-GMFFATGGADTSIKLFEVPK--V 155
Query: 125 TSVFGGEFQS--------GHTADVLSISINGSSSRMFVSGSCDSTARLWD--TRVASRAV 174
+ G+ Q+ H + + + S+ + +S + D+ + +D A RA
Sbjct: 156 KQMISGDTQARPLIRTFYDHAEPINDLDFHPRST-ILISSAKDNCIKFFDFSKTTAKRAF 214
Query: 175 RTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPH---- 230
+ F +V ++ F P G G+D L+D+ T YQ + P
Sbjct: 215 KVFQDTH-NVRSISFHPSGEFLLAGTDHPIPHLYDVNT-------YQCFLPSNFPDSGVS 266
Query: 231 --VTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSH-EGRISCLGLSADGS 287
+ + +S +G + +G ++D + A+ V ++G N+H + ++ + D
Sbjct: 267 GAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIG---NAHGKSEVTSAVFTKDQR 323
Query: 288 ALCTGSYDTNLKIWAFGGHRKV 309
+ + D+ +K+W G R V
Sbjct: 324 FVLSSGKDSTVKLWEIGSGRMV 345
>AT3G18140.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6213225-6214567 REVERSE
Length = 224
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 105 LITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARL 164
L T+S D T W+ TG ++ H + L I+ + +++ +C+ RL
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTI--QYPDSH-VNRLEIT----PDKHYLAAACNPHIRL 60
Query: 165 WDTRVAS-RAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 223
+D S + V T+ H +V AV F D +GS+DGT +++D+R + Y
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY---- 116
Query: 224 GDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
V V ++ + L +G NG+ VWD
Sbjct: 117 --ESVAAVNTVVLHPNQTELISGDQNGNIRVWD 147
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 91 YVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSS 150
+V+ + PD+ H + ++ + L+D+ + V + HT +V+++ +
Sbjct: 37 HVNRLEITPDK--HYLAAACNPHIRLFDVNSNSPQPVMTYD---SHTNNVMAVGFQCDAK 91
Query: 151 RMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
M+ SGS D T ++WD R + + VN V P+ +G +G R++D+
Sbjct: 92 WMY-SGSEDGTVKIWDLRAP--GCQKEYESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 211 RTGHQLQVYYQQHGDNEVPHVTSIAFSIS----GRLLFAGYSNGDCYVWDTLLAQVVLN- 265
R VP V + S++ G ++ A + G CYVW L + +
Sbjct: 149 RAN--------SCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTE 200
Query: 266 ---LGSLQNSHEGRI-SCL 280
L LQ +H G I CL
Sbjct: 201 FEPLHKLQ-AHNGHILKCL 218
>AT3G21540.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:7586100-7590856 REVERSE
Length = 955
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 27/300 (9%)
Query: 8 SERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIF 67
SE N ++ ++ + +WN T I + + P + G V I
Sbjct: 415 SEDNTLLMSTSHSEVKIWNPSTGSCLRTID--SGYGLCSLIVPQNKYGIVGTKSGVLEII 472
Query: 68 NLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSV 127
++ S T + + H G + S +P+ D+ +T S D W+ ++
Sbjct: 473 DIGSATKVEE-------VKAHGGTIWSITPIPN-DSGFVTVSADHEVKFWEYQVKQKSGK 524
Query: 128 FGGEFQSGHTA------DVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHE 181
+ + DVL+++I+ + + V+ DST +++ + + + +GH+
Sbjct: 525 ATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVA-LLDSTVKVFYMD-SLKFYLSLYGHK 582
Query: 182 GDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGR 241
V + DG TGS D +++ + G + + HGD+ V + F +
Sbjct: 583 LPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFA-HGDS----VMGVKFVRNTH 637
Query: 242 LLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
LF+ + WD + +L L H I CL +S G L TGS+D +++ W
Sbjct: 638 YLFSIGKDRLVKYWDADKFEHLLTL----EGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDG 203
SI S+S + G D + R+WDT + V F+ H+G V A+++ G+ +GS D
Sbjct: 70 SIASSASSLVAVGYADGSIRIWDTEKGTCEV-NFNSHKGAVTALRYNKVGSMLASGSKDN 128
Query: 204 TCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVV 263
L+D+ G + H D VT + F G+ L + + VWD L Q
Sbjct: 129 DIILWDV-VGESGLFRLRGHRD----QVTDLVFLDGGKKLVSSSKDKFLRVWD-LETQHC 182
Query: 264 LNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWA 302
+ + S H + + + + TGS D L+ +A
Sbjct: 183 MQIVS---GHHSEVWSVDTDPEERYVVTGSADQELRFYA 218
>AT5G54200.1 | Symbols: | WD-40 repeat family protein |
chr5:21993565-21997076 REVERSE
Length = 825
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 104 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTAR 163
HL++SS D+T LWD+++ VF H+ V I N F+SGS D+ R
Sbjct: 481 HLLSSSMDKTVRLWDLSSKTCLKVFS------HSDYVTCIQFNPVDDNYFISGSLDAKVR 534
Query: 164 LWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 223
+W + V ++ V A + PDG GS GTC L++ H ++ ++
Sbjct: 535 IWS--IPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT---HDNKLQQRRE 589
Query: 224 GDNEVPHVTSIAFSISGRLLFAGYS------NGDCYVWDTLLAQVVLNLGSLQNSHEGRI 277
+ + + I+G AG S + D +V +N++ +I
Sbjct: 590 INLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFKGFRNTN-SQI 648
Query: 278 SCLGLSADGSALCTGSYDTNLKIWAF 303
S L+++G L + S D+N+ +W +
Sbjct: 649 SA-SLTSNGKFLVSASEDSNVYVWNY 673
>AT5G49430.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:20037338-20045454 REVERSE
Length = 1677
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 90/225 (40%), Gaps = 47/225 (20%)
Query: 83 KMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLS 142
K L GH+ V C + ++IT S D+ +W + T + GH D+
Sbjct: 239 KRLRGHRNAVY-CAILDRSGRYVITGSDDRLVKVWSMDTAYCLASC-----RGHEGDITD 292
Query: 143 ISINGSSSRMFV-SGSCDSTARLWDTRVAS-RAVRTFHGHEGDVNAVKFFPDGN---RFG 197
+++ SS+ +F+ S S D R+W R+ V GH G V A+ F P +
Sbjct: 293 LAV--SSNNIFIASASNDCVIRVW--RLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLL 348
Query: 198 TGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDT 257
+ SDDGTCR++D R Y VP S SG SN
Sbjct: 349 SSSDDGTCRIWDARGAQFAPRIY-------VPRPPSPDGKNSG----PSSSNA------- 390
Query: 258 LLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWA 302
Q SH+ I C +A GS TGS DT ++++
Sbjct: 391 ------------QQSHQ--IFCCAFNASGSVFVTGSSDTLARVYS 421
>AT5G60940.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:24523757-24525655 FORWARD
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 43 VMTCA-FSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGH-------KGYVSS 94
V+ CA FSP G A GG D+ +F + V +M+SG + +
Sbjct: 33 VVRCARFSPDGMFFATGGADTSIKLFEVPK---------VKQMISGDTQARPLIRTFYDH 83
Query: 95 CQYVPDEDTH-----LITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSS 149
+ + D D H LI+S+ D +D + F FQ H +V SIS + S
Sbjct: 84 AEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFK-VFQDTH--NVRSISFH-PS 139
Query: 150 SRMFVSGSCDSTARLWDTRVASRAVRTFH----------GHEGDVNAVKFFPDGNRFGTG 199
++G+ L+D V T+ G G +N V++ G+ + T
Sbjct: 140 GEFLLAGTDHPIPHLYD-------VNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITA 192
Query: 200 SDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
S DG RLFD + ++ HG +E VTS F+ R + + + +W+
Sbjct: 193 SKDGAIRLFDGVSAKCVRSIGNAHGKSE---VTSAVFTKDQRFVLSSGKDSTVKLWE 246
>AT4G04940.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:2511212-2517052 REVERSE
Length = 910
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 11 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLN 70
N+++ SQ+G L +WN T + + K + V +C SP VA G D + N+
Sbjct: 152 NKVLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIK 211
Query: 71 SPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGG 130
+ + +G V++ + D L + +W++ SV
Sbjct: 212 LDEE------IVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSV--- 262
Query: 131 EFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW--DTRVA-SRAVRTFHGHEGDVNAV 187
+ H + ++S++ + + +S S D++ ++W DT R +R GH +
Sbjct: 263 -IRDAHDSSIISLNFLANEP-VLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCI 320
Query: 188 KFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQH 223
+F+ +G + D RLF + Q + Q+H
Sbjct: 321 RFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRH 356
>AT1G80670.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:30320809-30323543 REVERSE
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 13/204 (6%)
Query: 92 VSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSR 151
+SS + P D L+ +S D W+I+ + + H VL + +
Sbjct: 28 ISSLSFSPRADI-LVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 152 MFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIR 211
+F SG CD A++W + V T HEG + A+ + P N TGS D T + +D R
Sbjct: 87 VF-SGGCDKQAKMWPLLSGGQPV-TVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
Query: 212 TGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQN 271
Q V+ QQ D S+ L+ G ++ + V++ L +Q+
Sbjct: 145 --QQNPVHTQQLPDK------CYTLSVKHPLMVVGTADRNLIVFN--LQNPQTEFKRIQS 194
Query: 272 SHEGRISCLGLSADGSALCTGSYD 295
+ + C+ D GS +
Sbjct: 195 PLKYQTRCVTAFPDQQGFLVGSIE 218
>AT4G35050.1 | Symbols: MSI3, NFC3 | MSI3 (MULTICOPY SUPPRESSOR OF
IRA1 3); protein binding | chr4:16682752-16684751
REVERSE
Length = 424
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 15 SASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSV-ACGGLDSVCSIFNLNSPT 73
SA D +L++W+ T+Q H +K+ + +F+P + V A DS ++F+L
Sbjct: 236 SAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDL---- 291
Query: 74 DRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITT------------ 121
R P+ +LS H+G V ++ P+ +T L +S D+ ++WDI
Sbjct: 292 -RKLTAPL-HVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDA 349
Query: 122 --GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLW 165
G +F GH A + + N + S + D++ ++W
Sbjct: 350 EDGPPELLFS---HGGHKAKISDFAWNKDEPWVISSVAEDNSLQVW 392
>AT1G48870.1 | Symbols: | WD-40 repeat family protein |
chr1:18072325-18074457 REVERSE
Length = 593
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 47/218 (21%)
Query: 29 TSQKTHAIKLPCAWVM-----------TCAFSPTGQSVACGGLDSVCSIFNL-------- 69
T++K+H ++L A+++ T FSP G+ +A GG D V I+ +
Sbjct: 177 TNKKSH-VELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLA 235
Query: 70 -----NSPTDRDGNLPVS------------KMLSGHKGYVSSCQYVPDEDTHLITSSGDQ 112
P ++ L + + L GH G V + + L+++S D+
Sbjct: 236 SFLRQQEPINQQAALVLFPQKAFHIEETPFQELYGHTGDVLDLAW--SDSNLLLSASKDK 293
Query: 113 TCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASR 172
T LW VF H V + N + F SGS D AR+W ++
Sbjct: 294 TVRLWRTGCDQCLHVFH------HNNYVTCVEFNPVNKNNFASGSIDGKARIWG--LSEE 345
Query: 173 AVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
V + ++A+ + P+GN F G G CR + I
Sbjct: 346 RVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQI 383
>AT4G33260.1 | Symbols: CDC20.2 | CDC20.2; signal transducer |
chr4:16041233-16043180 REVERSE
Length = 447
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 38/314 (12%)
Query: 4 LDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL--PCAWVMTCAFSPTGQSVACGGLD 61
LDW S +++ + D + +W+A T + + + V + ++P G+ VA G +
Sbjct: 136 LDWGSAN--VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN 193
Query: 62 SVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITT 121
S ++ D N + + GH+ V S + + H++T+ G + I
Sbjct: 194 SEVQLW------DSASNRQLRTLKGGHQSRVGSLAW----NNHILTTGGMDGLI---INN 240
Query: 122 GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVAS-----RAVRT 176
+R E GHT +V + +GS ++ SG D+ +WD VAS + +
Sbjct: 241 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQL-ASGGNDNVVHIWDRSVASSNSTTQWLHR 299
Query: 177 FHGHEGDVNAVKFFP-DGNRFGTGSD--DGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTS 233
H V A+ + P N TG D T + ++ TG L + V S
Sbjct: 300 LEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV------DTGSQVCS 353
Query: 234 IAFSISGRLLFA--GYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCT 291
+ +S + R L + G++ +W ++ + L H R+ + S DG + +
Sbjct: 354 LLWSKNERELLSSHGFTQNQLTLWK---YPSMVKMAEL-TGHTSRVLYMAQSPDGCTVAS 409
Query: 292 GSYDTNLKIWAFGG 305
+ D L+ W G
Sbjct: 410 AAGDETLRFWNVFG 423
>AT4G33270.1 | Symbols: CDC20.1 | CDC20.1; signal transducer |
chr4:16044545-16046590 REVERSE
Length = 457
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 38/314 (12%)
Query: 4 LDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKL--PCAWVMTCAFSPTGQSVACGGLD 61
LDW S +++ + D + +W+A T + + + V + ++P G+ VA G +
Sbjct: 146 LDWGSAN--VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN 203
Query: 62 SVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITT 121
S ++ D N + + GH+ V S + + H++T+ G + I
Sbjct: 204 SEVQLW------DSASNRQLRTLKGGHQSRVGSLAW----NNHILTTGGMDGLI---INN 250
Query: 122 GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVAS-----RAVRT 176
+R E GHT +V + +GS ++ SG D+ +WD VAS + +
Sbjct: 251 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQL-ASGGNDNVVHIWDRSVASSNSTTQWLHR 309
Query: 177 FHGHEGDVNAVKFFP-DGNRFGTGSD--DGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTS 233
H V A+ + P N TG D T + ++ TG L + V S
Sbjct: 310 LEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV------DTGSQVCS 363
Query: 234 IAFSISGRLLFA--GYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCT 291
+ +S + R L + G++ +W ++ + L H R+ + S DG + +
Sbjct: 364 LLWSKNERELLSSHGFTQNQLTLWKY---PSMVKMAEL-TGHTSRVLYMAQSPDGCTVAS 419
Query: 292 GSYDTNLKIWAFGG 305
+ D L+ W G
Sbjct: 420 AAGDETLRFWNVFG 433
>AT4G34380.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:16438835-16440322 FORWARD
Length = 495
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 133 QSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVA-SRAVRTFHGHEGDVNAVKFFP 191
++ H V S+S++ ++ S S D+T ++W R+A S+ + + H H+ +N+V
Sbjct: 231 KTKHNDAVSSLSLDVELGLLY-SSSWDTTIKVW--RIADSKCLESIHAHDDAINSVMSGF 287
Query: 192 DGNRFGTGSDDGTCRLFDIR-----TGHQL-QVYYQQHGDNEVPHVTSIAFSISGRLLFA 245
D F TGS DGT +++ T H L QV +Q VT++A +++
Sbjct: 288 DDLVF-TGSADGTVKVWKRELQGKGTKHTLAQVLLKQEN-----AVTALAVKSQSSIVYC 341
Query: 246 GYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
G S+G W+ G + H+ + CLG++ G+ L +GS D N+ +W
Sbjct: 342 GSSDGLVNYWERSKRSFT---GGILKGHKSAVLCLGIA--GNLLLSGSADKNICVW 392
>AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4
protein (ZFWD4) | chr5:19947796-19949055 REVERSE
Length = 419
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 37/306 (12%)
Query: 11 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACG-----GLDSVCS 65
+++ S S DG L VW+ + Q H+I L + G ++ G GL +
Sbjct: 144 DKLFSVSIDGTLRVWDCNSGQCVHSINLD---------AEAGSLISEGPWVFLGLPNAIK 194
Query: 66 IFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 125
FN+ T +D +L + G V + + L + + ++W TT +
Sbjct: 195 AFNVQ--TSQDLHLQAA-------GVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSES 245
Query: 126 SVFGGEFQ-SGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDV 184
F GH+ +V ++ G +M SGS D T ++WD + + T H G V
Sbjct: 246 DPFKYLTSLEGHSGEVTCFAVGG---QMLYSGSVDKTIKMWDLNTL-QCIMTLKQHTGTV 301
Query: 185 NAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGR-LL 243
++ + + S DGT +++ L+V + + H S + ++
Sbjct: 302 TSLLCW--DKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPII 359
Query: 244 FAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
F Y NG ++D Q G + ++H I+ L + G L +G NL++W
Sbjct: 360 FCSYQNGTVGIFDLPSFQ---ERGRMFSTHT--IATLTIGPQG-LLFSGDESGNLRVWTL 413
Query: 304 GGHRKV 309
KV
Sbjct: 414 AAGNKV 419
>AT1G49040.1 | Symbols: SCD1 | SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE
1); protein binding | chr1:18139419-18148826 REVERSE
Length = 1187
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 7 TSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSI 66
+S+R +IVS S D +IVW+ T+Q +K + V +C +G+ V D +
Sbjct: 906 SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQV-SCVKMLSGERVLTAAHDGTVKM 964
Query: 67 FNLNSPTDRDGNLPVSKMLSGHKGYVSSC----QYVPDEDTHLITSSGDQTCV-LWDITT 121
+++ + M G SS +Y D+ T ++ ++G T +WDI +
Sbjct: 965 WDVR-----------TDMCVATVGRCSSAILSLEY--DDSTGILAAAGRDTVANIWDIRS 1011
Query: 122 GLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWD-TRVASRAVRTFHGH 180
G + GHT + SI + + ++GS D TAR+W +R + AV H
Sbjct: 1012 GKQMHKL-----KGHTKWIRSIRMVEDT---LITGSDDWTARVWSVSRGSCDAV--LACH 1061
Query: 181 EGDVNAVKFFPDGNRFGTGSDDGTCRLFD 209
G V +V++ P TGS DG R ++
Sbjct: 1062 AGPVQSVEYSPFDKGIITGSADGLLRFWE 1090
>AT5G64630.2 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIATA
2); nucleotide binding / protein binding |
chr5:25833298-25836158 FORWARD
Length = 487
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 40 CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVP 99
CA V T FSP+G+ +A G I+ L+ P++ + + V K LS H+ V Q+ P
Sbjct: 65 CA-VNTIRFSPSGELLASGADGGELFIWKLH-PSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 100 DEDTHLITSSGDQTCVLWDITTG 122
D D +LI+ S D +C++WD+ G
Sbjct: 123 D-DAYLISGSVDNSCIIWDVNKG 144
>AT5G64630.1 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | FAS2 (FASCIATA
2); nucleotide binding / protein binding |
chr5:25833298-25835822 FORWARD
Length = 397
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 40 CAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVP 99
CA V T FSP+G+ +A G I+ L+ P++ + + V K LS H+ V Q+ P
Sbjct: 65 CA-VNTIRFSPSGELLASGADGGELFIWKLH-PSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 100 DEDTHLITSSGDQTCVLWDITTG 122
D D +LI+ S D +C++WD+ G
Sbjct: 123 D-DAYLISGSVDNSCIIWDVNKG 144
>AT3G44530.1 | Symbols: HIRA | HIRA (Arabidopsis homolog of histone
chaperone HIRA); nucleotide binding / protein binding |
chr3:16116026-16121247 FORWARD
Length = 1058
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 28 LTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRD-GNLPVSK--- 83
+ ++K +K + + P G+ A GG D I+N+ S D+D N+ +
Sbjct: 1 MIAEKPFWVKHEGLQIFSIDVQPNGERFATGGGDHKVRIWNMKS-VDKDLQNIDTKERLL 59
Query: 84 -MLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFG-GEFQS------- 134
L H G V+ ++ + ++ + S DQ + + G T+ FG GE
Sbjct: 60 ATLRDHFGSVNCVRWAKNS-RYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAV 118
Query: 135 ----GHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFF 190
GHTADV+ ++ + S M SGS D+T +W+ R GH V V +
Sbjct: 119 MTLRGHTADVVDLNWSPDDS-MLASGSLDNTVHIWNMRTG-MCTTVLRGHLSLVKGVTWD 176
Query: 191 PDGNRFGTGSDDGT 204
P G+ + SDD T
Sbjct: 177 PIGSFIASQSDDKT 190
>AT1G15440.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306159-5309460 REVERSE
Length = 860
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 88/235 (37%), Gaps = 53/235 (22%)
Query: 20 GRLIVWN-----ALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT- 73
G+L+VW+ + Q+ H + C +SP Q +A G D+ ++N+ S T
Sbjct: 329 GQLLVWDWRTETYILKQQGHYFDVNCV-----TYSPDSQLLATGADDNKVKVWNVMSGTC 383
Query: 74 ----------------DRDGNLPVSKMLSG---------HKGYVSSCQYVPDEDTHLIT- 107
D + +S L G +K Y + P + L
Sbjct: 384 FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTAD 443
Query: 108 SSGDQTCV---------LWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSC 158
SGD C +W TG + SGH A V + + +++ S S
Sbjct: 444 PSGDVVCAGTLDSFEIFVWSKKTGQIKDIL-----SGHEAPVHGLMFS-PLTQLLASSSW 497
Query: 159 DSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG 213
D T RLWD + V TF H DV V F PDG + + + DG +D G
Sbjct: 498 DYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551
>AT3G18950.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6536900-6538321 FORWARD
Length = 473
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 152 MFVSGSCDSTARLWDTRVA-SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
+ SGS D T ++W R++ S+ + + H+ +N V D F TGS DGT +++
Sbjct: 263 LLYSGSWDKTLKVW--RLSDSKCLESIQAHDDAINTVAAGFDDLLF-TGSADGTLKVWKR 319
Query: 211 R-----TGHQL-QVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVL 264
T H L V +Q VT++A +I+ +++ G S+G W+ Q L
Sbjct: 320 ELQGKGTKHFLVNVLMKQEN-----AVTALAVNITAAVVYCGSSDGTVNFWE---GQKYL 371
Query: 265 NLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGG 305
+ G H R++ L L+A GS + +G D N+ +W G
Sbjct: 372 SHGGTLRGH--RLAVLCLAAAGSLVLSGGADKNICVWRRNG 410
>AT1G15440.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:5306159-5309460 REVERSE
Length = 900
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 88/235 (37%), Gaps = 53/235 (22%)
Query: 20 GRLIVWN-----ALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPT- 73
G+L+VW+ + Q+ H + C +SP Q +A G D+ ++N+ S T
Sbjct: 369 GQLLVWDWRTETYILKQQGHYFDVNCV-----TYSPDSQLLATGADDNKVKVWNVMSGTC 423
Query: 74 ----------------DRDGNLPVSKMLSG---------HKGYVSSCQYVPDEDTHLIT- 107
D + +S L G +K Y + P + L
Sbjct: 424 FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTAD 483
Query: 108 SSGDQTCV---------LWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSC 158
SGD C +W TG + SGH A V + + +++ S S
Sbjct: 484 PSGDVVCAGTLDSFEIFVWSKKTGQIKDIL-----SGHEAPVHGLMFS-PLTQLLASSSW 537
Query: 159 DSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTG 213
D T RLWD + V TF H DV V F PDG + + + DG +D G
Sbjct: 538 DYTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWN--ALTSQKTHAIKLPCAWVMTCAFSPTGQSVACG 58
V +L + ++ + ++SAS DG + W+ + KT+ P +V A P+G V G
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DPSGDVVCAG 492
Query: 59 GLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWD 118
LDS IF + T + + +LSGH+ V + P L +SS D T LWD
Sbjct: 493 TLDSF-EIFVWSKKTGQ-----IKDILSGHEAPVHGLMFSPLTQL-LASSSWDYTVRLWD 545
Query: 119 ITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDT 167
+ T F+ H DVL+++ + S + D WDT
Sbjct: 546 VFASKGTV---ETFRHNH--DVLTVAFR-PDGKQLASSTLDGQINFWDT 588
>AT5G42010.1 | Symbols: | WD-40 repeat family protein |
chr5:16802280-16804757 FORWARD
Length = 709
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 31/237 (13%)
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLR-TSVFGGEFQSGHTADVLSI 143
GH G + + E L++SS D+T LW + + VF H + V +
Sbjct: 359 FRGHTGEILDLSW--SEKGFLLSSSVDETVRLWRVGSSDECIRVFS------HKSFVTCV 410
Query: 144 SINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDG 203
+ N F+SGS D R+WD V+ V + V A+ + PDG GS G
Sbjct: 411 AFNPVDDNYFISGSIDGKVRIWD--VSQFRVVDYTDIRQIVTALCYRPDGKGAVVGSMTG 468
Query: 204 TCRLFDIRTGHQLQV--YYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQ 261
CR + T +QLQ+ HG +VP+ I+G F G + D + + +Q
Sbjct: 469 ECRFYHT-TDNQLQLDRDISLHGKKKVPNK-----RITGFQFFPG--DSDKVMVTSADSQ 520
Query: 262 VVLNLG-----SLQNSHEGRISCL-----GLSADGSALCTGSYDTNLKIWAFGGHRK 308
+ + G L+ + R + + ++DG + + ++ + +W F K
Sbjct: 521 IRIICGVDTICKLKKASSLRTTLMSPTFASFTSDGKHIVSTIEESGIHVWDFSQPNK 577
>AT3G18860.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6501774-6508352 FORWARD
Length = 760
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 53 QSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTH----LITS 108
+++A D +++L+ P+D+ K+L GH +V ++P D + L++
Sbjct: 32 ENIATSSRDRTIRVWSLD-PSDK-RKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSG 89
Query: 109 SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTR 168
S D +W++ G GH V ++I+ VS S D T + W
Sbjct: 90 SMDTFVFVWNLMNGENIQTL-----KGHQMQVTGVAIDNED---IVSSSVDQTLKRWRN- 140
Query: 169 VASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 215
+ V ++ H+ + AV P G +GS D + +L+ +T Q
Sbjct: 141 --GQLVESWDAHQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKTSLQ 184
>AT3G18860.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6501774-6508352 FORWARD
Length = 760
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 53 QSVACGGLDSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTH----LITS 108
+++A D +++L+ P+D+ K+L GH +V ++P D + L++
Sbjct: 32 ENIATSSRDRTIRVWSLD-PSDK-RKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSG 89
Query: 109 SGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTR 168
S D +W++ G GH V ++I+ VS S D T + W
Sbjct: 90 SMDTFVFVWNLMNGENIQTL-----KGHQMQVTGVAIDNED---IVSSSVDQTLKRWRN- 140
Query: 169 VASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQ 215
+ V ++ H+ + AV P G +GS D + +L+ +T Q
Sbjct: 141 --GQLVESWDAHQSPIQAVIRLPSG-ELVSGSSDASLKLWKGKTSLQ 184
>AT4G32551.1 | Symbols: LUG, RON2 | LUG (LEUNIG); protein binding /
protein heterodimerization/ transcription repressor |
chr4:15707863-15713359 FORWARD
Length = 931
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 30/299 (10%)
Query: 6 WTSERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCS 65
++S+ + SA D + ++W T + ++ A + FSP+ +A D
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 66 IFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRT 125
++ D D + GH V+S + P +D + + D W I G T
Sbjct: 719 VW------DADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCT 772
Query: 126 SVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRAVR-TFHGHEGDV 184
V+ G G T + +++ S + + D V ++A+R + GH +
Sbjct: 773 RVYKG----GSTQIRFQPRVG-----KYLAASSANLVNVLD--VETQAIRHSLQGHANPI 821
Query: 185 NAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYYQQ--HGDNEVPHVTSIAFSISGRL 242
N+V + P G+ + S+D +++ + TG + + ++ +G+ V A+ L
Sbjct: 822 NSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYP---SL 877
Query: 243 LFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIW 301
L G CY L + N +HEG I+ L +S + + S+D +K+W
Sbjct: 878 LVIG-----CY-QSLELWNMSENKTMTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>AT5G02430.1 | Symbols: | WD-40 repeat family protein |
chr5:526592-529839 FORWARD
Length = 905
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 111 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVA 170
D+T LWDI T +F H V + N F+SGS D+ R+W+ ++
Sbjct: 539 DKTVRLWDIETQSCLKLF------AHNDYVTCVQFNPLDEDYFISGSLDAKIRIWN--IS 590
Query: 171 SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLF 208
+R V ++ + V AV + PDG GS +G CRL+
Sbjct: 591 NRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLY 628
>AT5G58230.1 | Symbols: MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY
SUPRESSOR OF IRA1); protein binding |
chr5:23556112-23557994 FORWARD
Length = 424
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 104 HLITSSGDQTCVLWDIT-TGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTA 162
HL++ S D LWDI T S+ + H V ++ + +F S D
Sbjct: 193 HLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
Query: 163 RLWDTR--VASRAVRTFHGHEGDVNAVKFFPDGN-RFGTGSDDGTCRLFDIR 211
+WD R AS+ V++ H +VN + F P TGS D T +LFD+R
Sbjct: 253 LIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
>AT2G32950.1 | Symbols: COP1, ATCOP1, DET340, FUS1, EMB168 | COP1
(CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding /
ubiquitin-protein ligase | chr2:13978000-13983282
FORWARD
Length = 675
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Query: 88 HKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISING 147
H+ S + E + L++ S D +W T SV + + A++ + N
Sbjct: 462 HEKRAWSVDFSRTEPSMLVSGSDDCKVKVW--CTRQEASVINIDMK----ANICCVKYNP 515
Query: 148 SSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRL 207
SS GS D +D R S+ + F GH+ V+ VKF + N + S D T RL
Sbjct: 516 GSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSN-NELASASTDSTLRL 574
Query: 208 FDIRTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVV 263
+D++ ++ + + + +++ L G + YV+ + + V
Sbjct: 575 WDVKDNLPVRTFRGHTNEKNF-----VGLTVNSEYLACGSETNEVYVYHKEITRPV 625
>AT2G37670.1 | Symbols: | WD-40 repeat family protein |
chr2:15797384-15800536 REVERSE
Length = 903
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 25/206 (12%)
Query: 111 DQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTARLWDTRVA 170
D+T LWDI T +F H V I + F+SGS D+ R+W +
Sbjct: 526 DKTVRLWDIETKTCLKLF------AHNDYVTCIQFSPVDENYFLSGSLDAKIRIWS--IQ 577
Query: 171 SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI---RTGHQLQVYYQQHGDNE 227
R V + V A + PDG GS G CR +D + Q+ Q + ++
Sbjct: 578 DRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTEDCKLSQTNQIDVQSNKKSQ 637
Query: 228 VPH-VTSIAFS-ISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSA- 284
+TS FS ++ + ++ + D ++V+ +N +C LSA
Sbjct: 638 AKRKITSFQFSPVNPSEVLVTSADSRIRILDG--SEVIHKFKGFRN------TCSQLSAS 689
Query: 285 ---DGSALCTGSYDTNLKIWAFGGHR 307
DG + S D+ + +W HR
Sbjct: 690 YSQDGKYIICASEDSQVYLWKNDFHR 715
>AT5G26900.1 | Symbols: | WD-40 repeat family protein |
chr5:9463752-9465086 FORWARD
Length = 444
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 78 NLPVSKMLSGHKGYVSSCQYVPDEDTHLITSSG-DQTCVLWDITTGLRTSVFGGEFQSGH 136
N V + GH+ V S + D H++T+ G D V D+ +R+S+ E GH
Sbjct: 200 NRQVRTLRGGHESRVGSLAW----DNHILTTGGMDGKIVNNDVR--IRSSIV--ETYLGH 251
Query: 137 TADVLSISINGSSSRMFVSGSCDSTARLWDTRVASRA-----VRTFHGHEGDVNAVKFFP 191
T +V + + S ++ SG D+ +WD +AS + F H V A+ + P
Sbjct: 252 TEEVCGLKWSESGNKQ-ASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCP 310
Query: 192 DGNRF---GTGSDDGTCRLFDIRTGHQLQVYYQQHGDNEVP---HVTSIAFSISGRLLFA 245
G G DG + ++ TG L N V V S+ +S S R L +
Sbjct: 311 FQASLLATGGGVGDGKIKFWNTHTGACL---------NSVETGSQVCSLLWSQSERELLS 361
Query: 246 --GYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
G++ +W + L N H R+ + S +G + + + D NL++W
Sbjct: 362 SHGFTQNQLTLWKYPSMSKMAEL----NGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Query: 304 GGH 306
G
Sbjct: 418 FGE 420
>AT1G49450.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr1:18305684-18307099 FORWARD
Length = 471
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 152 MFVSGSCDSTARLWDTRVA-SRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDI 210
+ SGS D T ++W R++ S+ + + H+ VN V D F TGS DGT +++
Sbjct: 259 LLYSGSWDKTLKVW--RLSDSKCLESIEAHDDAVNTVVSGFDDLVF-TGSADGTLKVWKR 315
Query: 211 RT-GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQVVLNLGSL 269
G +++ Q + VT++A +++ +++ G S+G W+ + + + G++
Sbjct: 316 EVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWER--QKYLTHKGTI 373
Query: 270 QNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGG 305
H R++ L L+ GS L +G D N+ +W G
Sbjct: 374 ---HGHRMAVLCLATAGSLLLSGGADKNICVWKRNG 406
>AT1G64610.2 | Symbols: | WD-40 repeat family protein |
chr1:23998920-24001297 REVERSE
Length = 647
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 24/226 (10%)
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDI--TTGLRTSVFGGEFQSGHTADVLS 142
GH G + + E +L++SS D+T LW + LRT H V
Sbjct: 318 FKGHIGEILDLSW--SEKGYLLSSSVDETVRLWRVGCDECLRTFT--------HNNFVTC 367
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
++ N F+SGS D R+WD V V + V AV + PD GS
Sbjct: 368 VAFNPVDDNYFISGSIDGKVRIWD--VTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMT 425
Query: 203 GTCRLFDIRTGH-QLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQ 261
G CR + I Q+ HG +V + ISG S+ D + + +Q
Sbjct: 426 GNCRFYHIFENQLQMDQEINVHGKKKV-----ASKRISGLQYLPSDSDSDKVMVTSADSQ 480
Query: 262 VVLNLGS----LQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+ + G + R + +DG + + S D+ + +W++
Sbjct: 481 IRIICGEDVICKLKASSLRTTSASFISDGKHIISTSEDSYINVWSY 526
>AT1G64610.1 | Symbols: | WD-40 repeat family protein |
chr1:23998920-24001297 REVERSE
Length = 647
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 24/226 (10%)
Query: 85 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDI--TTGLRTSVFGGEFQSGHTADVLS 142
GH G + + E +L++SS D+T LW + LRT H V
Sbjct: 318 FKGHIGEILDLSW--SEKGYLLSSSVDETVRLWRVGCDECLRTFT--------HNNFVTC 367
Query: 143 ISINGSSSRMFVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDD 202
++ N F+SGS D R+WD V V + V AV + PD GS
Sbjct: 368 VAFNPVDDNYFISGSIDGKVRIWD--VTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMT 425
Query: 203 GTCRLFDIRTGH-QLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWDTLLAQ 261
G CR + I Q+ HG +V + ISG S+ D + + +Q
Sbjct: 426 GNCRFYHIFENQLQMDQEINVHGKKKV-----ASKRISGLQYLPSDSDSDKVMVTSADSQ 480
Query: 262 VVLNLGS----LQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAF 303
+ + G + R + +DG + + S D+ + +W++
Sbjct: 481 IRIICGEDVICKLKASSLRTTSASFISDGKHIISTSEDSYINVWSY 526
>AT5G24320.1 | Symbols: | WD-40 repeat family protein |
chr5:8284858-8287651 REVERSE
Length = 694
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 129/329 (39%), Gaps = 42/329 (12%)
Query: 1 VYSLDWTSERNRIVSASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPTGQ-S 54
+ ++ ++ + + SA +DG L VW+ + ++ +P C + S +
Sbjct: 254 ILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKIDPSCIYFEVSKLSELRPVA 313
Query: 55 VACGGL-----------DSVCSIFNLNSPTDRDGNLPVSKMLSGHKGYVSSCQYVPDEDT 103
V G+ +S C I + R + P+ + L GH G + + ++
Sbjct: 314 VEKDGITGSLMSPRKTTESACVI--IPPKIFRVLDKPLHEFL-GHSGDILDISW--SKNN 368
Query: 104 HLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSSSRMFVSGSCDSTAR 163
L+++S D + LW I +F H V S+ N F+SGS D R
Sbjct: 369 RLLSASVDNSVRLWQIGCEDCLGIFS------HNNYVTSVQFNPVDDDHFISGSIDGKVR 422
Query: 164 LWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQV--YYQ 221
+W + V + G V AV + PDG G+ CR +++ +GH LQ+ +
Sbjct: 423 IWSA--SQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV-SGHCLQLDGHIC 479
Query: 222 QHGDNEVPHVTSIAFSI----SGRLLFAGYSNGDCYVWDTLLAQVVLNLGSLQNSHEGRI 277
H + + I F R++ A + D V VV +N+ G
Sbjct: 480 LHNKKKSSNKRIIGFQFDSTDPSRVMVA---SADSQVRIISGRNVVHKYKGSRNA--GNQ 534
Query: 278 SCLGLSADGSALCTGSYDTNLKIWAFGGH 306
+ADG + + D+++ +W GH
Sbjct: 535 ISASFTADGKHIVSACDDSSVYVWNCVGH 563
>AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 447
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 153 FVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
F +G+ D T R+WDTR S +V G+ G V +++F DG ++D ++
Sbjct: 334 FATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 393
Query: 213 GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
G++ + G+ ++ I+FS LF G VWD
Sbjct: 394 GYKKEQEIDFFGE-----ISGISFSPDTESLFIG-------VWD 425
>AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 441
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 153 FVSGSCDSTARLWDTRVASRAVRTFHGHEGDVNAVKFFPDGNRFGTGSDDGTCRLFDIRT 212
F +G+ D T R+WDTR S +V G+ G V +++F DG ++D ++
Sbjct: 328 FATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 387
Query: 213 GHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCYVWD 256
G++ + G+ ++ I+FS LF G VWD
Sbjct: 388 GYKKEQEIDFFGE-----ISGISFSPDTESLFIG-------VWD 419
>AT2G26490.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:11268035-11269432 FORWARD
Length = 465
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 136 HTADVLSISINGSSSRMFVSGSCDSTARLWDTRVA-SRAVRTFHGHEGDVNAVKFFPDGN 194
H V +S+N ++ S S D T ++W R+A S+ + + H+ VN+V +
Sbjct: 205 HADAVSCLSLNDEQGLLY-SASWDRTIKVW--RIADSKCLESIPAHDDAVNSVVSTTEAI 261
Query: 195 RFGTGSDDGTCRLFDI-RTGHQLQVYYQQHGDNEVPHVTSIAFSISGRLLFAGYSNGDCY 253
F +GS DGT + + + G + Q + VT++A S +G ++ G S+G
Sbjct: 262 VF-SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVN 320
Query: 254 VWDTLLAQVVLNLGSLQNSHEGRISCLGLSADGSALCTGSYDTNLKIWAFGGH 306
W+ + LN G + H+ + CL ++ GS + +GS D + +W G+
Sbjct: 321 FWER---EKQLNYGGILKGHKLAVLCLEVA--GSLVFSGSADKTICVWKRDGN 368