Jatropha Genome Database
- JcCB0010451.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0010451.10 - phase: 0 /partial
(155 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /... 311 9e-86
AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein bi... 311 9e-86
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 123 4e-29
AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 122 8e-29
AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzy... 120 3e-28
AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 120 4e-28
AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 120 4e-28
AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 119 5e-28
AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGA... 119 7e-28
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 119 8e-28
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 119 8e-28
AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 119 1e-27
AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 118 2e-27
AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 118 2e-27
AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 117 2e-27
AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 117 4e-27
AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 117 4e-27
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 116 5e-27
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBIQUITING-CONJUGA... 116 6e-27
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 115 1e-26
AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 114 2e-26
AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme... 114 2e-26
AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzy... 112 7e-26
AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 112 7e-26
AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 112 7e-26
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 112 1e-25
AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzy... 110 3e-25
AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzy... 105 1e-23
AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 104 2e-23
AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 104 2e-23
AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 102 1e-22
AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 99 1e-21
AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10... 98 2e-21
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 95 2e-20
AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme... 94 5e-20
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 92 1e-19
AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 92 2e-19
AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzy... 91 2e-19
AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 91 3e-19
AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzy... 90 5e-19
AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzy... 89 1e-18
AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATIN... 89 1e-18
AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme... 89 1e-18
AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER PR... 88 2e-18
AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzy... 88 2e-18
AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative... 78 2e-15
AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative | ch... 74 4e-14
AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 73 8e-14
AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 73 8e-14
AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzy... 72 1e-13
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE... 71 3e-13
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1; ubiquitin-pro... 70 6e-13
AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzy... 67 5e-12
AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzy... 64 3e-11
AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZY... 64 4e-11
AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 57 3e-09
AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 57 3e-09
AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 57 6e-09
AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 57 6e-09
AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZWEI HOMOLOGUE 1)... 55 2e-08
AT2G36060.1 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzym... 53 7e-08
AT2G36060.3 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzym... 52 1e-07
AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | UEV1D-4 (UBIQUITIN... 51 3e-07
AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZWEI HOMOLOGE 2);... 50 7e-07
>AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /
ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 157
Score = 311 bits (798), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 145/155 (93%), Positives = 151/155 (97%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPE 60
ASRARLFKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGP+ETPYEGGVFQLAFSVPE
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 61 QYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 120
YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
Query: 121 PLNCDSGNLLRSGDIRGYQSMARMYTRLAASPKKG 155
PLNCDSGNLLRSGD+RG+ SMA+MYTRLAA PKKG
Sbjct: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
>AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein
binding / ubiquitin-protein ligase |
chr5:8967983-8969173 FORWARD
Length = 157
Score = 311 bits (798), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 145/155 (93%), Positives = 151/155 (97%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPE 60
ASRARLFKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGP+ETPYEGGVFQLAFSVPE
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 61 QYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 120
YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
Query: 121 PLNCDSGNLLRSGDIRGYQSMARMYTRLAASPKKG 155
PLNCDSGNLLRSGD+RG+ SMA+MYTRLAA PKKG
Sbjct: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5778327 REVERSE
Length = 153
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%), Gaps = 4/147 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE + + E A P I + N+ + +I GPT++PYEGGVF+L +PE+YP+
Sbjct: 9 RIIKETQRLLSEPA--PGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPM 66
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+
Sbjct: 67 AAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSE 125
Query: 125 DSGNLLRSGDIRGYQSMARMYTRLAAS 151
+ +S + ++ A+ +TRL AS
Sbjct: 126 NIAKHWKSNEAEAVET-AKEWTRLYAS 151
>AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 153
Score = 122 bits (307), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 94/147 (63%), Gaps = 4/147 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE + + E A P I + N+ + +I GPT++PYEGGVF+L +PE+YP+
Sbjct: 9 RIIKETQRLLSEPA--PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPM 66
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+
Sbjct: 67 AAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSE 125
Query: 125 DSGNLLRSGDIRGYQSMARMYTRLAAS 151
+ +S + + A+ +TRL AS
Sbjct: 126 NIAKHWKSNEAEAVDT-AKEWTRLYAS 151
>AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzyme
29); ubiquitin-protein ligase | chr2:7267880-7268737
FORWARD
Length = 148
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 8/148 (5%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDS--NIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
R+ KE KE+QR DP + + ++F W A I GP E+PY GGVF + P Y
Sbjct: 5 RILKELKELQR----DPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 63 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 122
P +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD PL
Sbjct: 61 PFKPPKVVFRTKVFHPNIN-SNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 123 NCDSGNLLRSGDIRGYQSMARMYTRLAA 150
+ ++ ++ D Y++MAR +T+ A
Sbjct: 120 VPEIAHIYKT-DKTKYEAMARSWTQKYA 146
>AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DKNKYESTARSWTQ 143
>AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DKNKYESTARSWTQ 143
>AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203
REVERSE
Length = 148
Score = 119 bits (299), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+++PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DKNKYESTARTWTQ 143
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein
ligase | chr3:2641487-2642489 FORWARD
Length = 148
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ ++ V +D +F W A I GP E+PY GGVF ++ P YP
Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAED--MFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVSFKTKVYHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DRSKYESTARSWTQ 143
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 119 bits (298), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+++PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNVN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DRAKYESTARSWTQ 143
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 119 bits (298), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+++PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNVN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 122 EIAHMYKT-DRAKYESTARSWTQ 143
>AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293
REVERSE
Length = 178
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+++PY GGVF + P YP
Sbjct: 35 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 92
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 93 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y+S AR +T+
Sbjct: 152 EIAHMYKT-DKNKYESTARTWTQ 173
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y++ AR +T+
Sbjct: 122 EIAHMYKT-DRAKYEATARNWTQ 143
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ D Y++ AR +T+
Sbjct: 122 EIAHMYKT-DRAKYEATARNWTQ 143
>AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 154
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 5/148 (3%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEG-GVFQLAFSVPEQYP 63
R+ KE + + E A P I + N+ + +I GPT++PYEG GVF+L +PE+YP
Sbjct: 9 RIIKETQRLLSEPA--PGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYP 66
Query: 64 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 123
+ P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V +I AL++ P PD PL+
Sbjct: 67 MAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLS 125
Query: 124 CDSGNLLRSGDIRGYQSMARMYTRLAAS 151
+ +S + + A+ +TRL AS
Sbjct: 126 ENIAKHWKSNEAEAVDT-AKEWTRLYAS 152
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 11/146 (7%)
Query: 2 SRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQ 61
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L+ E
Sbjct: 5 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSED 62
Query: 62 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 122 LNCDSGNLLRSGDIRGYQSMARMYTR 147
N ++ R Y R Y R
Sbjct: 122 ANSEAA--------RMYSESKREYNR 139
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 11/146 (7%)
Query: 2 SRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQ 61
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L+ E
Sbjct: 5 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSED 62
Query: 62 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 122 LNCDSGNLLRSGDIRGYQSMARMYTR 147
N ++ R Y R Y R
Sbjct: 122 ANSEAA--------RMYSESKREYNR 139
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5777903 REVERSE
Length = 120
Score = 116 bits (291), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
Query: 35 WTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKN 94
+ +I GPT++PYEGGVF+L +PE+YP+ P+VRFLTKI+HPN+ K G ICLDILK+
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKD 62
Query: 95 AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAS 151
WSPA +++V +I AL++ P PD PL+ + +S + ++ A+ +TRL AS
Sbjct: 63 KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVET-AKEWTRLYAS 118
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein
ligase | chr2:774271-775149 FORWARD
Length = 152
Score = 116 bits (290), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 88/142 (61%), Gaps = 4/142 (2%)
Query: 2 SRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQ 61
+R RL +++K +Q++ A I D+NI W A+I GP +TP++GG F+L+ E
Sbjct: 5 ARKRLMRDFKRLQQDPPAG--ISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSED 62
Query: 62 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + ++ +I +L+ P P+SP
Sbjct: 63 YPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 121
Query: 122 LNCDSGNLLRSGDIRGYQSMAR 143
N ++ + S R Y R
Sbjct: 122 ANSEAARMF-SESKREYNRRVR 142
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 157
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 5 RLFKEYKEVQRE--KAADPDIQLVCDDS-----NIFKWTALIKGPTETPYEGGVFQLAFS 57
R+ KE K++Q++ + ++ C + ++F W A I GP+++PY GGVF +
Sbjct: 5 RILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIH 64
Query: 58 VPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE 117
P YP +PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P
Sbjct: 65 FPPDYPFKPPKVAFRTKVFHPNVN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 123
Query: 118 PDSPLNCDSGNLLRSGDIRGYQSMARMYTR 147
PD PL + ++ ++ D Y+S AR +T+
Sbjct: 124 PDDPLVPEIAHMYKT-DRAKYESTARSWTQ 152
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDD---SNIFKWTALIKGPTETPYEGGVFQLAFSVPEQ 61
R+ KE K++Q+ DP + ++F W A I GP E+PY GGVF + P
Sbjct: 5 RILKELKDLQK----DPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 62 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD P
Sbjct: 61 YPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 119
Query: 122 LNCDSGNLLRSGDIRGYQSMARMYTR 147
L + ++ ++ D Y++ AR +T+
Sbjct: 120 LVPEIAHMYKT-DRAKYEATARNWTQ 144
>AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465
FORWARD
Length = 150
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 2 SRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQ 61
++ RL ++K +Q++ I D+NI W ALI GP +TP++GG F+L E
Sbjct: 5 AKKRLMWDFKRLQKDPPVG--ISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTED 62
Query: 62 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
YP +PP VRF++++FHPN+ + G ICLDIL+N WSP + + +V +I +L+ P PDSP
Sbjct: 63 YPNKPPIVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSP 121
Query: 122 LNCDSGNLLRSGDIRGYQ 139
N ++ L S + R Y
Sbjct: 122 ANAEAARLF-SENKREYN 138
>AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzyme
27); ubiquitin-protein ligase | chr5:20699626-20700998
REVERSE
Length = 192
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%), Gaps = 8/150 (5%)
Query: 4 ARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYP 63
+R+ KE ++ +R + + I++ N+ + T I GP TPYEGG FQ+ ++P+ YP
Sbjct: 5 SRIQKELQDCERNQDSS-GIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYP 63
Query: 64 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 123
+PP+++F TK++HPN+ ++G ICLDILK+ WSPA TL++ +I AL++ PEP P +
Sbjct: 64 FEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQD 123
Query: 124 CDSGNLLRSGDIRGYQ---SMARMYTRLAA 150
++ ++ YQ S AR +T A
Sbjct: 124 A----VVAEQYMKNYQVFVSTARYWTETFA 149
>AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE +++QR+ DD +F+W A I GP ++P+ GGVF + P YP
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTGDD--MFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVYHPNIN-SNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ ++ Y+S A+ +T+
Sbjct: 122 EIAHIYKTDRVK-YESTAQSWTQ 143
>AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE +++QR+ DD +F+W A I GP ++P+ GGVF + P YP
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTGDD--MFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 63 KPPKVAFRTKVYHPNIN-SNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 125 DSGNLLRSGDIRGYQSMARMYTR 147
+ ++ ++ ++ Y+S A+ +T+
Sbjct: 122 EIAHIYKTDRVK-YESTAQSWTQ 143
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 190
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Query: 31 NIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLD 90
++F W A I GP+++PY GGVF + P YP +PP+V F TK+FHPNV+ G ICLD
Sbjct: 71 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVN-SNGSICLD 129
Query: 91 ILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTR 147
ILK WSPA T+ V +I +L+ P PD PL + ++ ++ D Y+S AR +T+
Sbjct: 130 ILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYESTARSWTQ 185
>AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzyme
12); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:2643482-2644545 FORWARD
Length = 149
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ +E +++QR A+ V ++ +IF W A I GP ++PY GGVF ++ YP
Sbjct: 5 RISRELRDMQRHPPANCSAGPVAEE-DIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 124
+PP+V F TK++HPN+ K G ICLDILK WSPA T V +I +L+ P P+ PL
Sbjct: 64 KPPKVNFKTKVYHPNIDSK-GSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVP 122
Query: 125 DSGNLLRSGDIRGYQSMARMYTRLAA 150
+ +L + D Y+S A+ +T+ A
Sbjct: 123 EIAHLYKV-DKSKYESTAQKWTQKYA 147
>AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzyme
31); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:13683791-13684924 REVERSE
Length = 154
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 28 DDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEI 87
+ +NI++WTA+I+GP TPYEGG+F L+ P YP +PP+ F T I+HPN++ G I
Sbjct: 32 NSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNIN-DEGSI 90
Query: 88 CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTR 147
C++ILK+ W+PA ++ V +I+ L+ P PD PL + G L ++ + + AR +T
Sbjct: 91 CMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQ-FDQRAREFTA 149
Query: 148 LAAS 151
A+
Sbjct: 150 RHAN 153
>AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 11 KEVQREKAADPD-IQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQV 69
KE++ + PD I++V +D + + A I+GP TPYE G+F++ ++ +P PP+
Sbjct: 17 KELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKG 76
Query: 70 RFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 129
F+TKIFHPNV GEIC++ LK W+P+ L+ V + L+ P P+S LN +G +
Sbjct: 77 YFMTKIFHPNV-ASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKM 135
Query: 130 LRSGDIRGYQSMARMYTRLAASPK 153
L + Y AR+YT + A PK
Sbjct: 136 LLE-NYDEYARHARLYTGIHAKPK 158
>AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Query: 11 KEVQREKAADPD-IQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQV 69
KE++ + PD I++V +D + + A I+GP TPYE G+F++ ++ +P PP+
Sbjct: 17 KELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKG 76
Query: 70 RFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 129
F+TKIFHPNV GEIC++ LK W+P+ L+ V + L+ P P+S LN +G +
Sbjct: 77 YFMTKIFHPNV-ASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKM 135
Query: 130 LRSGDIRGYQSMARMYTRLAASPK 153
L + Y AR+YT + A PK
Sbjct: 136 LLE-NYDEYARHARLYTGIHAKPK 158
>AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29651858 FORWARD
Length = 112
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE + + E A P I + N+ + +I GPT++PYEGGVF+L +PE+YP+
Sbjct: 9 RIIKETQRLLSEPA--PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPM 66
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVC 106
P+VRFLTKI+HPN+ K G ICLDILK+ WSPA +++V
Sbjct: 67 AAPKVRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVL 107
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 145
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSV 105
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKV 102
>AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10);
ubiquitin-protein ligase | chr5:21633187-21633989
REVERSE
Length = 109
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
R+ KE K++Q++ V +D +F W A I GP+E+PY GGVF + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 65 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSV 105
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V
Sbjct: 63 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKV 102
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423569-4424797 REVERSE
Length = 182
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 11 KEVQREKAA-----DPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQ 65
K +QRE A PD N++ W A I GP+ TPYEGG+F L P YP +
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 66 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 121
PP++ F T+I+H NV G++ ++IL+++WSPA T+ V +AI ++ PEP SP
Sbjct: 99 PPKLVFKTRIYHCNVD-TAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
>AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme
6); ubiquitin-protein ligase | chr2:18932243-18933421
REVERSE
Length = 183
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
Query: 12 EVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRF 71
++ + +D + V DD +F T GPT++ Y+GGV+++ +PE YP + P V F
Sbjct: 11 DMMKLMMSDYKVDTVNDDLQMFYVT--FHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGF 68
Query: 72 LTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAII-ALMAHPEPDSPLNCDSGNLL 130
+ KI+HPNV +G +CLD++ WSP + L +V + + L+ +P P P N ++ +LL
Sbjct: 69 VNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLL 128
Query: 131 RSGDIRGYQSMARMYTRLAASPKK 154
D Y+ + Y A P++
Sbjct: 129 MR-DRAAYELKVKEYCEKYAKPEE 151
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423828-4424797 REVERSE
Length = 170
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 11 KEVQREKAA-----DPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQ 65
K +QRE A PD N++ W A I GP+ TPYEGG+F L P YP +
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 66 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 118
PP++ F T+I+H NV G++ ++IL+++WSPA T+ V +AI ++ PEP
Sbjct: 99 PPKLVFKTRIYHCNVD-TAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7004283 REVERSE
Length = 181
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 18 AADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFH 77
ADP I ++ NIF W I G +T +EG ++L+ + YP + P+V+F T FH
Sbjct: 51 GADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFH 110
Query: 78 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 129
PNV G ICLDIL++ WS A+ ++++ +I +L+ P SPLN + L
Sbjct: 111 PNVDL-YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQL 161
>AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzyme
14); ubiquitin-protein ligase | chr3:20531520-20532895
FORWARD
Length = 167
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 26 VCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTG 85
+ D+ N+F+W+ I GP +T YEGG F S PE YP+ PP V F ++++HPNV + G
Sbjct: 29 LVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNV-YSDG 87
Query: 86 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRS 132
++C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 88 KVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRD 147
Query: 133 GDIRGYQSMARMYTR 147
+ ++R R
Sbjct: 148 NRAEFRKKVSRCVRR 162
>AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7003727 REVERSE
Length = 136
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 18 AADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFH 77
ADP I ++ NIF W I G +T +EG ++L+ + YP + P+V+F T FH
Sbjct: 6 GADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFH 65
Query: 78 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 129
PNV G ICLDIL++ WS A+ ++++ +I +L+ P SPLN + L
Sbjct: 66 PNVDL-YGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQL 116
>AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzyme
37); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:8934569-8936207 REVERSE
Length = 409
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 28 DDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEI 87
D S A I+GP +T Y G+F L +PE+YP QPP V F T I+HPN+ +G I
Sbjct: 40 DFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNID-NSGRI 98
Query: 88 CLDIL----KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCD 125
CLDIL K AW P+ + +V ++ L++ P PD L C+
Sbjct: 99 CLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCE 140
>AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzyme
20); ubiquitin-protein ligase | chr1:18705005-18706303
REVERSE
Length = 180
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 28 DDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEI 87
++ NIF W I G +T +EG ++L+ S YP +PP+V+F T FHPNV G I
Sbjct: 60 EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDV-YGNI 118
Query: 88 CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 129
CLDIL++ WS A+ ++++ +I +L+ P SPLN + L
Sbjct: 119 CLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQL 160
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATING
ENZYME 4); ubiquitin-protein ligase |
chr5:16538296-16539956 REVERSE
Length = 187
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Query: 11 KEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVR 70
+E+ K D ++ + + ++ GP ++ Y+GGV+++ +P+ YP + P V
Sbjct: 8 REMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVG 67
Query: 71 FLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAII-ALMAHPEPDSPLNCDSGNL 129
F+TKI+HPNV +G +CLD++ WSP + L +V + L+ +P P PLN ++ L
Sbjct: 68 FITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAAL 127
Query: 130 LRSGDIRGYQSMARMYTRLAASPKKG 155
+ D Y+ + Y A P +G
Sbjct: 128 MMR-DRPAYEQRVKEYCEKYAKPGEG 152
>AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme
5); ubiquitin-protein ligase | chr1:23667888-23669003
REVERSE
Length = 185
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 41 GPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAW 100
GP ++ YEGGV+++ +P+ YP + P V F+TKI+HPNV +G +CLD++ WSP +
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
Query: 101 TLQSVCRAII-ALMAHPEPDSPLNCDSGNLLRSGDIRGYQSMARMYTRLAASPK 153
L +V + L+ +P P PLN ++ L+ D Y+ + Y A P+
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMR-DRPTYEQRVKEYCEKYAKPR 150
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER
PROTEIN 7); protein binding / ubiquitin-protein ligase |
chr5:23919868-23921291 REVERSE
Length = 198
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 27 CDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGE 86
CD NIF+W+ I GP +T YEGG F + P+ YP PP VRF + ++HPNV + G
Sbjct: 61 CDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNV-YSDGR 119
Query: 87 ICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 131
+C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 120 VCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWR 177
>AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme
13); ubiquitin-protein ligase | chr3:17096120-17097315
REVERSE
Length = 166
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 14/119 (11%)
Query: 26 VCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTG 85
+ D+ NIF+W+ I GP +T YEGG F S P+ YP PP VRF + I+HPNV + G
Sbjct: 28 LVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNV-YPDG 86
Query: 86 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 131
+C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 87 RVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWR 145
>AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative |
chr2:13905649-13906271 REVERSE
Length = 177
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQ-LVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVP 59
++ RL+KE++E ++ ++ + NIF+W A + GP PYE GVF ++ +P
Sbjct: 29 SAENRLWKEFQE--KDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIP 86
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHP-EP 118
+YP +PP++ F TKIFHPN+ + GEI +DIL + WS A T+ V +I +++++P EP
Sbjct: 87 PKYPYEPPKITFKTKIFHPNIS-EIGEIFVDILGSRWSSALTINLVLLSICSILSNPVEP 145
Query: 119 DSPLNCDSGNLLRSGDIRGYQSMARMYT 146
L + L D + Y+ +AR +T
Sbjct: 146 --LLVSNHAARLYQKDRKAYEKVAREWT 171
>AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative |
chr2:8073337-8074565 REVERSE
Length = 185
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPE 60
A RL K+ E+ K+ I +++ + IK P E Y G F +F V
Sbjct: 31 AGELRLHKDISELNLPKSCK--ISFPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSFQVSN 87
Query: 61 QYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 120
YP + P+V+ TK++HPN+ + G +CL+IL+ W P + +V + L P +
Sbjct: 88 MYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYED 146
Query: 121 PLNCDSGNLLR 131
PLN ++ +LR
Sbjct: 147 PLNHEAAAVLR 157
>AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPE 60
A RL K+ E+ + I ++ + IK P + Y G F F V
Sbjct: 30 AGELRLHKDISELNLPSSCS--ISFPNGKDDLMNFEVSIK-PDDGYYHNGTFVFTFQVSP 86
Query: 61 QYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 120
YP + P+V+ TK++HPN+ + G +CL+IL+ W P + +V + L P +
Sbjct: 87 VYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSED 145
Query: 121 PLNCDSGNLLR 131
PLN D+ +LR
Sbjct: 146 PLNHDAAAVLR 156
>AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 1 ASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPE 60
A RL K+ E+ + I ++ + IK P + Y G F F V
Sbjct: 30 AGELRLHKDISELNLPSSCS--ISFPNGKDDLMNFEVSIK-PDDGYYHNGTFVFTFQVSP 86
Query: 61 QYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 120
YP + P+V+ TK++HPN+ + G +CL+IL+ W P + +V + L P +
Sbjct: 87 VYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSED 145
Query: 121 PLNCDSGNLLR 131
PLN D+ +LR
Sbjct: 146 PLNHDAAAVLR 156
>AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzyme
32); ubiquitin-protein ligase | chr3:5797296-5799467
FORWARD
Length = 309
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 18/123 (14%)
Query: 5 RLFKEYKEVQREKAADP--DIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
R+ +E KE+Q A+P D + + NIF+W I+GP +T +EGG++ +P Y
Sbjct: 15 RILQEVKEMQ----ANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 63 PLQPPQVRFLTKIFHPNVHFKTG-EICLDILK---NAWSPAWTLQSVCRAIIALMAHPEP 118
P +PP LT PN F+T +ICL I W P+W++++ A+IA M P
Sbjct: 71 PFKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFM----P 122
Query: 119 DSP 121
SP
Sbjct: 123 TSP 125
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1
(SUMO CONJUGATION ENZYME 1); SUMO ligase |
chr3:21428831-21430110 REVERSE
Length = 160
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 31 NIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLD 90
N+ W I G T +EGG F L E YP +PP+ +F FHPNV + +G +CL
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLS 96
Query: 91 ILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLL 130
IL W PA T++ + I L+ P P P D +L
Sbjct: 97 ILNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLF 138
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1;
ubiquitin-protein ligase | chr1:17031337-17032967
FORWARD
Length = 161
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 5 RLFKEYKEVQ-------REKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFS 57
RL KE E Q R K D N+ KWT + G T Y +QL
Sbjct: 19 RLQKELSEWQLNPPTGFRHKVTD----------NLQKWTIDVTGAPGTLYANETYQLQVE 68
Query: 58 VPEQYPLQPPQVRFLTKI-FHPNVHFKTGEICLDILKNAWSPAWTLQSVC 106
PE YP++ PQV F++ HP++ + G ICLDIL ++WSPA T+ SVC
Sbjct: 69 FPEHYPMEAPQVVFVSPAPSHPHI-YSNGHICLDILYDSWSPAMTVNSVC 117
>AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzyme
16); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:28313623-28314960 FORWARD
Length = 161
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 31 NIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKI-FHPNVHFKTGEICL 89
N+ +W + G T Y +QL PE YP++ PQV FL HP++ + G ICL
Sbjct: 42 NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHI-YSNGHICL 100
Query: 90 DILKNAWSPAWTLQSVC 106
DIL ++WSPA T+ S+C
Sbjct: 101 DILYDSWSPAMTVSSIC 117
>AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzyme
18); small conjugating protein ligase/ ubiquitin-protein
ligase | chr5:17244206-17245904 REVERSE
Length = 161
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 31 NIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKI-FHPNVHFKTGEICL 89
N+ KW + G T Y + L P+ YP++ PQV F+ HP++ + G ICL
Sbjct: 42 NLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHI-YSNGHICL 100
Query: 90 DILKNAWSPAWTLQSVC 106
DIL ++WSPA T+ SVC
Sbjct: 101 DILYDSWSPAMTVSSVC 117
>AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZYME
17); small conjugating protein ligase/ ubiquitin-protein
ligase | chr4:17201969-17202890 FORWARD
Length = 161
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPTETPYEGGVFQLAFSVPEQYPL 64
RL KE+ E Q + ++ N+ +W + G T Y +QL PE YP+
Sbjct: 19 RLQKEFMEWQTNPPSGFKHRV---SDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPM 75
Query: 65 QPPQVRFLTKI-FHPNVHFKTGEICLDILKNAWSPAWTLQSVC 106
+ PQV F HP++ + G ICLD+L ++WSPA L S+C
Sbjct: 76 EAPQVIFQHPAPLHPHI-YSNGHICLDVLYDSWSPAMRLSSIC 117
>AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDS--NIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
RL KEY+ + +E P +V S +I +W +++G TP+ GG + P +Y
Sbjct: 9 RLQKEYRALCKE----PVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 63 PLQPPQVRFLTKIFHPNVHFKT-GEICL---DILKNAWSPAWTLQSVCRAIIALMAHPEP 118
P +PP + T PN F T +ICL D +W+P W++ S+ +++ M P
Sbjct: 65 PYKPPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 119 DS 120
+
Sbjct: 121 TT 122
>AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDS--NIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
RL KEY+ + +E P +V S +I +W +++G TP+ GG + P +Y
Sbjct: 9 RLQKEYRALCKE----PVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 63 PLQPPQVRFLTKIFHPNVHFKT-GEICL---DILKNAWSPAWTLQSVCRAIIALMAHPEP 118
P +PP + T PN F T +ICL D +W+P W++ S+ +++ M P
Sbjct: 65 PYKPPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 119 DS 120
+
Sbjct: 121 TT 122
>AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDS--NIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
RL KEY+ + +E P +V S +I +W +++G TP+ GG + P +Y
Sbjct: 9 RLQKEYRALCKE----PVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 63 PLQPPQVRFLTKIFHPNVHFKT-GEICL---DILKNAWSPAWTLQSVCRAIIALMAHPEP 118
P +PP + T PN F T +ICL D +W+P W++ S+ +++ M P
Sbjct: 65 PYKPPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 119 DS 120
+
Sbjct: 121 TT 122
>AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 5 RLFKEYKEVQREKAADPDIQLVCDDS--NIFKWTALIKGPTETPYEGGVFQLAFSVPEQY 62
RL KEY+ + +E P +V S +I +W +++G TP+ GG + P +Y
Sbjct: 9 RLQKEYRALCKE----PVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 63 PLQPPQVRFLTKIFHPNVHFKT-GEICL---DILKNAWSPAWTLQSVCRAIIALMAHPEP 118
P +PP + T PN F T +ICL D +W+P W++ S+ +++ M P
Sbjct: 65 PYKPPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 119 DS 120
+
Sbjct: 121 TT 122
>AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZWEI HOMOLOGUE 1);
protein binding / ubiquitin-protein ligase |
chr1:8257209-8258573 REVERSE
Length = 158
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 5 RLFKEYKEVQR-EKA-ADPDIQLVCDDSN---IFKWTALIKGPTETPYEGGVFQLAFSVP 59
R F+ +E++R EK D + DD++ + WT I GP T YEG +FQL
Sbjct: 12 RNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCG 71
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTG--EICLDILKNAWSPAWTLQSV 105
++YP PP VRF T+I V+ +TG E L + W +T++ +
Sbjct: 72 KEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDI 119
>AT2G36060.1 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzyme
family protein | chr2:15143012-15143998 REVERSE
Length = 145
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 5 RLFKEYKEVQR-EKA-ADPDIQLVCDDSN---IFKWTALIKGPTETPYEGGVFQLAFSVP 59
R F+ +E++R EK D + DD + + WT I GP T +EG ++QL
Sbjct: 13 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCD 72
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTGEI---CLDILKNAWSPAWTLQSVCRAIIALMA 114
+ YP +PP VRF ++I V+ TG + +L N W +T++ + + MA
Sbjct: 73 KDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLAN-WQRQYTMEDILTQLKKEMA 129
>AT2G36060.3 | Symbols: MMZ3, UEV1C | ubiquitin-conjugating enzyme
family protein | chr2:15143012-15143998 REVERSE
Length = 144
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 5 RLFKEYKEVQR-EKA-ADPDIQLVCDDSN---IFKWTALIKGPTETPYEGGVFQLAFSVP 59
R F+ +E++R EK D + DD + + WT I GP T +EG ++QL
Sbjct: 13 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCD 72
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTG--EICLDILKNAWSPAWTLQSVCRAIIALMA 114
+ YP +PP VRF ++I V+ TG +L N W +T++ + + MA
Sbjct: 73 KDYPEKPPTVRFHSRINMTCVNHDTGVDSKKFGVLAN-WQRQYTMEDILTQLKKEMA 128
>AT3G52560.1 | Symbols: UEV1D-4, MMZ4, UEV1D | UEV1D-4 (UBIQUITIN E2
VARIANT 1D-4); protein binding / ubiquitin-protein
ligase | chr3:19494678-19495954 REVERSE
Length = 146
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 5 RLFKEYKEVQR-EKA-ADPDIQLVCDDSN---IFKWTALIKGPTETPYEGGVFQLAFSVP 59
R F+ +E++R EK D + DD + + WT I GP T +EG ++QL
Sbjct: 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCD 73
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTGEI---CLDILKNAWSPAWTLQSV 105
+ YP +PP VRF +++ V+ +TG + +L N W +T++ +
Sbjct: 74 KDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLAN-WQREYTMEDI 121
>AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZWEI HOMOLOGE 2);
protein binding / ubiquitin-protein ligase |
chr1:26640755-26641949 FORWARD
Length = 159
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 5 RLFKEYKEVQR-EKA-ADPDIQLVCDDSN---IFKWTALIKGPTETPYEGGVFQLAFSVP 59
R F+ +E++R EK D + DD++ + WT I GP T YEG +FQL
Sbjct: 12 RNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCG 71
Query: 60 EQYPLQPPQVRFLTKIFHPNVHFKTGEI 87
+ YP PP VRF ++I V+ + G +
Sbjct: 72 KDYPESPPTVRFQSRINMACVNPENGVV 99