Jatropha Genome Database

JcCB0009671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009671.20 - phase: 0 
         (366 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17265.1 | Symbols: HSK | HSK (HOMOSERINE KINASE); homoserine...   475   e-134
AT4G35295.1 | Symbols:  | homoserine kinase, putative / HSK, put...    75   5e-14

>AT2G17265.1 | Symbols: HSK | HSK (HOMOSERINE KINASE); homoserine
           kinase | chr2:7508606-7509718 FORWARD
          Length = 370

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/368 (70%), Positives = 291/368 (79%), Gaps = 7/368 (1%)

Query: 2   AICFLSPSKPVTFSPSLQNKRPP-----PLLRCNFALPTIATTEPEPVYTSVRSFAPATV 56
           ++CF SPSKP+++     N  PP      + RC  ++ T+   EPEPV+ SV++FAPATV
Sbjct: 3   SLCFQSPSKPISYFQPKSNPSPPLFAKVSVFRCRASVQTLVAVEPEPVFVSVKTFAPATV 62

Query: 57  ANLGPGFDFLGCAVDGLGDFVAVRIDPSVHPGEISISDITGTHASKKLSKNPLWNCATIA 116
           ANLGPGFDFLGCAVDGLGD V +R+DPSV  GE+SIS+ITGT  + KLS NPL NCA IA
Sbjct: 63  ANLGPGFDFLGCAVDGLGDHVTLRVDPSVRAGEVSISEITGT--TTKLSTNPLRNCAGIA 120

Query: 117 AIAAMKMLNIRSVGLSLTLEKGLPLGSGLGXXXXXXXXXXXXXNEIFGGKLQVKDLVRAG 176
           AIA MKML IRSVGLSL L KGLPLGSGLG             NEIFG KL    LV AG
Sbjct: 121 AIATMKMLGIRSVGLSLDLHKGLPLGSGLGSSAASAAAAAVAVNEIFGRKLGSDQLVLAG 180

Query: 177 LESEAKVSGYHADNIAPAIMGGFVLIRNYNPLELMSLNFPEEKEIFFVLVSPDFEAPTKK 236
           LESEAKVSGYHADNIAPAIMGGFVLIRNY PL+L  L FP +K++FFVLVSPDFEAPTKK
Sbjct: 181 LESEAKVSGYHADNIAPAIMGGFVLIRNYEPLDLKPLRFPSDKDLFFVLVSPDFEAPTKK 240

Query: 237 MRAALPAEVGIPHHVWNCSQAGALVASVLQGDLVGLGKALSNDKIVEPKRAPLIPGMEEV 296
           MRAALP E+ + HHVWN SQA ALVA+VL+GD V LGKALS+DKIVEP RAPLIPGME V
Sbjct: 241 MRAALPTEIPMVHHVWNSSQAAALVAAVLEGDAVMLGKALSSDKIVEPTRAPLIPGMEAV 300

Query: 297 KKAAISAGAFGCTISGAGPTAVAVIDDEERGKEIGEKMVEAFLKEGNLKAVAMVKRLDRV 356
           KKAA+ AGAFGCTISGAGPTAVAVID EE+G+ IGEKMVEAF K G+LK+VA VK+LD V
Sbjct: 301 KKAALEAGAFGCTISGAGPTAVAVIDSEEKGQVIGEKMVEAFWKVGHLKSVASVKKLDNV 360

Query: 357 GARLVGSV 364
           GARLV SV
Sbjct: 361 GARLVNSV 368


>AT4G35295.1 | Symbols:  | homoserine kinase, putative / HSK,
           putative | chr4:16795333-16796223 FORWARD
          Length = 111

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 5/62 (8%)

Query: 303 AGAFGCTISGAGPTAVAVIDDEERGKEIGEKMVEAFLKEGNLKAVAMVKRLDRVGARLVG 362
           AGAFG TI     TAVAVID  E+G EIGEKMV+ FLK GNLK+ A VK+LD+VGARL+ 
Sbjct: 55  AGAFGRTI-----TAVAVIDTAEKGYEIGEKMVQVFLKIGNLKSTASVKKLDKVGARLIE 109

Query: 363 SV 364
           S+
Sbjct: 110 SM 111