Jatropha Genome Database
- JcCB0009671.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0009671.10 + phase: 0 /pseudo/partial
(116 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19910.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 182 4e-47
AT3G63530.2 | Symbols: BB, BB2 | BB (BIG BROTHER); protein bindi... 120 2e-28
AT3G63530.1 | Symbols: BB, BB2 | BB (BIG BROTHER); protein bindi... 120 2e-28
AT3G47180.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 95 9e-21
AT3G15070.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 87 3e-18
AT5G52140.1 | Symbols: | protein binding / zinc ion binding | c... 81 1e-16
AT1G53190.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 80 3e-16
AT1G53190.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 80 3e-16
AT5G42940.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 78 1e-15
AT4G34040.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 77 3e-15
AT2G15530.3 | Symbols: | zinc finger (C3HC4-type RING finger) f... 75 9e-15
AT2G15530.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 75 9e-15
AT2G15530.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 75 9e-15
AT5G10650.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 71 1e-13
AT5G10650.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 71 1e-13
AT4G31450.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 70 2e-13
AT5G24870.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 69 7e-13
AT5G24870.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 69 7e-13
AT5G07225.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 67 2e-12
AT1G45180.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 67 3e-12
AT5G67120.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 65 1e-11
AT4G26580.1 | Symbols: | protein binding / zinc ion binding | c... 65 1e-11
AT1G80400.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 64 1e-11
AT4G32600.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 62 6e-11
AT1G17970.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 62 9e-11
AT1G22670.1 | Symbols: | protease-associated zinc finger (C3HC4... 62 1e-10
AT1G73760.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 61 1e-10
AT2G37150.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 61 2e-10
AT2G37150.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 61 2e-10
AT2G17450.1 | Symbols: RHA3A | RHA3A; protein binding / zinc ion... 60 2e-10
AT2G27940.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 60 3e-10
AT5G55970.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 60 3e-10
AT5G55970.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 60 3e-10
AT1G60360.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 4e-10
AT5G66160.2 | Symbols: RMR1 | JR700; peptidase/ protein binding ... 59 5e-10
AT5G66160.1 | Symbols: ATRMR1, RMR1 | JR700; peptidase/ protein ... 59 5e-10
AT3G10815.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 6e-10
AT5G27420.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 7e-10
AT4G35840.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 8e-10
AT1G35625.1 | Symbols: | peptidase/ protein binding / zinc ion ... 59 9e-10
AT2G35420.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 9e-10
AT1G71980.1 | Symbols: | protease-associated zinc finger (C3HC4... 58 1e-09
AT1G35330.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 58 1e-09
AT3G30460.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 58 1e-09
AT1G04790.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 2e-09
AT1G49220.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 2e-09
AT5G52150.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 3e-09
AT3G18773.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 3e-09
AT1G18780.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 3e-09
AT1G35630.1 | Symbols: | protease-associated zinc finger (C3HC4... 57 3e-09
AT1G32361.1 | Symbols: ATL1F | ATL1F; protein binding / zinc ion... 57 3e-09
AT1G49200.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 57 3e-09
AT2G17730.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 56 4e-09
AT5G46650.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 55 1e-08
AT4G09130.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 1e-08
AT3G05200.1 | Symbols: ATL6 | ATL6; protein binding / zinc ion b... 54 1e-08
AT4G09100.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 1e-08
AT3G47990.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 2e-08
AT2G29840.1 | Symbols: | protein binding / zinc ion binding | c... 54 2e-08
AT3G20395.1 | Symbols: | protein binding / zinc ion binding | c... 54 2e-08
AT1G49850.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 2e-08
AT1G20823.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 2e-08
AT3G61180.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 2e-08
AT5G43420.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 3e-08
AT5G45290.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 3e-08
AT3G14320.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 54 3e-08
AT1G36950.1 | Symbols: | zinc finger protein-related | chr1:140... 53 3e-08
AT1G68070.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 53 3e-08
AT1G49210.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 53 3e-08
AT3G16720.1 | Symbols: ATL2 | ATL2; protein binding / zinc ion b... 53 4e-08
AT5G05810.1 | Symbols: ATL43 | ATL43; protein binding / zinc ion... 53 4e-08
AT5G08139.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 53 5e-08
AT2G40830.3 | Symbols: RHC1A | RHC1A; protein binding / zinc ion... 52 5e-08
AT2G40830.1 | Symbols: RHC1A | RHC1A; protein binding / zinc ion... 52 5e-08
AT2G40830.2 | Symbols: RHC1A | RHC1A; protein binding / zinc ion... 52 5e-08
AT5G66070.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 5e-08
AT2G35910.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 6e-08
AT5G66070.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 6e-08
AT2G01735.1 | Symbols: RIE1 | RIE1 (RING-FINGER PROTEIN FOR EMBR... 52 6e-08
AT1G74620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 7e-08
AT4G09120.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 7e-08
AT3G19950.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 8e-08
AT1G04360.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 9e-08
AT2G46160.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 9e-08
AT5G60820.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 1e-07
AT2G25410.1 | Symbols: | protein binding / zinc ion binding | c... 52 1e-07
AT3G58720.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 1e-07
AT2G42350.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 1e-07
AT4G17245.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 52 1e-07
AT5G47610.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 1e-07
AT2G42360.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 1e-07
AT1G72200.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 1e-07
AT1G72310.1 | Symbols: ATL3 | ATL3; protein binding / zinc ion b... 51 1e-07
AT1G26800.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 2e-07
AT4G28890.1 | Symbols: | protein binding / ubiquitin-protein li... 51 2e-07
AT1G74410.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 2e-07
AT4G09560.1 | Symbols: | peptidase/ protein binding / zinc ion ... 51 2e-07
AT2G20030.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 2e-07
AT1G28040.1 | Symbols: | protein binding / zinc ion binding | c... 51 2e-07
AT3G55530.1 | Symbols: SDIR1 | SDIR1 (SALT- AND DROUGHT-INDUCED ... 51 2e-07
AT4G11680.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 51 2e-07
AT4G17920.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT3G18930.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT3G18930.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT3G02340.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT2G46495.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT5G06490.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-07
AT4G10160.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT5G15820.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT5G17600.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT1G14200.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT1G12760.1 | Symbols: | protein binding / ubiquitin-protein li... 50 3e-07
AT2G03000.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT5G45290.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 3e-07
AT1G12760.2 | Symbols: | protein binding / ubiquitin-protein li... 50 4e-07
AT4G00305.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 4e-07
AT1G76410.1 | Symbols: ATL8 | ATL8; protein binding / zinc ion b... 50 4e-07
AT1G68180.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 4e-07
AT4G14220.1 | Symbols: RHF1A | RHF1A (RING-H2 GROUP F1A); protei... 50 4e-07
AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC4-type RING fin... 49 4e-07
AT3G60080.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 4e-07
AT2G35000.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 4e-07
AT2G18670.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 4e-07
AT5G20910.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 5e-07
AT4G26400.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 5e-07
AT4G26400.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 5e-07
AT3G11110.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 5e-07
AT2G39720.1 | Symbols: RHC2A | RHC2A; protein binding / zinc ion... 49 5e-07
AT5G07040.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 6e-07
AT2G44330.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 6e-07
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 7e-07
AT3G61550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 7e-07
AT5G22000.2 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protei... 49 7e-07
AT5G22000.3 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protei... 49 7e-07
AT5G22000.1 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protei... 49 7e-07
AT5G41430.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 49 8e-07
AT2G34000.1 | Symbols: | zinc finger protein-related | chr2:143... 49 9e-07
AT3G10910.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT3G56580.3 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT3G56580.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT3G56580.2 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 48 1e-06
AT4G10150.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 48 1e-06
AT4G15975.1 | Symbols: | protein binding / zinc ion binding | c... 48 2e-06
AT2G15580.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 2e-06
AT4G30370.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 2e-06
AT1G33480.1 | Symbols: | protein binding / zinc ion binding | c... 47 2e-06
AT1G53820.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 2e-06
AT5G10380.1 | Symbols: RING1 | RING1; protein binding / ubiquiti... 47 2e-06
AT1G22500.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 2e-06
AT5G01880.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 2e-06
AT2G44578.1 | Symbols: | protein binding / zinc ion binding | c... 47 2e-06
AT4G00070.1 | Symbols: | INVOLVED IN: biological_process unknow... 47 3e-06
AT4G09110.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 3e-06
AT1G63170.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 4e-06
AT4G17905.1 | Symbols: ATL4H | ATL4H; protein binding / zinc ion... 46 4e-06
AT5G05280.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 4e-06
AT5G57750.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 4e-06
AT4G40070.1 | Symbols: | protein binding / zinc ion binding | c... 46 4e-06
AT3G60966.1 | Symbols: | protein binding / zinc ion binding | c... 46 5e-06
AT1G18770.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 5e-06
AT1G55530.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 5e-06
AT2G37580.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 46 6e-06
AT2G44581.1 | Symbols: | protein binding / zinc ion binding | c... 45 6e-06
AT5G58580.1 | Symbols: ATL63 | ATL63 (ARABIDOPSIS TÓXICOS ... 45 6e-06
AT3G19140.1 | Symbols: | protein binding / zinc ion binding | c... 45 7e-06
AT1G18760.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 45 8e-06
AT3G13228.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 45 8e-06
AT2G18650.1 | Symbols: MEE16 | MEE16 (maternal effect embryo arr... 45 8e-06
>AT3G19910.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6926497-6929324 FORWARD
Length = 340
Score = 182 bits (462), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 95/104 (91%)
Query: 10 QDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVIC 69
QDAW+E+DPDELSYEELLALG++VGTESRGLSADTIASLPS +K G +QNG+N+SCVIC
Sbjct: 232 QDAWDEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVIC 291
Query: 70 RLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
RLDY+D E L +L CKHSYHSECIN+WLKINKVCPVCS EVS+S
Sbjct: 292 RLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTS 335
>AT3G63530.2 | Symbols: BB, BB2 | BB (BIG BROTHER); protein binding
/ ubiquitin-protein ligase/ zinc ion binding |
chr3:23456407-23457787 REVERSE
Length = 248
Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 10 QDAWEE-VDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGS--SQNGSNDSC 66
Q +W++ +DPD ++YEEL+ LGE VGTESRGLS + I +LP+ +K GS S+ + + C
Sbjct: 138 QVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERC 197
Query: 67 VICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
VIC+L Y GE L CKH YHSECI+ WL INKVCPVC+ EV
Sbjct: 198 VICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | BB (BIG BROTHER); protein binding
/ ubiquitin-protein ligase/ zinc ion binding |
chr3:23456407-23457787 REVERSE
Length = 248
Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 10 QDAWEE-VDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGS--SQNGSNDSC 66
Q +W++ +DPD ++YEEL+ LGE VGTESRGLS + I +LP+ +K GS S+ + + C
Sbjct: 138 QVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYKFGSIFSRKRAGERC 197
Query: 67 VICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
VIC+L Y GE L CKH YHSECI+ WL INKVCPVC+ EV
Sbjct: 198 VICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G47180.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17372821-17373453 REVERSE
Length = 210
Score = 94.7 bits (234), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 18 PDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGE 77
PD+LSYEEL+ALG+ +G E+RGL+ I++ + + S D CV+C++++++ E
Sbjct: 114 PDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDRCVVCQMEFEERE 173
Query: 78 TLTVL-SCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
+L VL C H YHSECI WL+ K+CP+C E S S
Sbjct: 174 SLVVLRPCDHPYHSECITKWLETKKICPICCSEPSVS 210
>AT3G15070.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:5070472-5072344 REVERSE
Length = 486
Score = 86.7 bits (213), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 16 VDPDELSYEELLALGEVVGTESRGLSADTIASL------PSVNFKAGSSQNGSNDSCVIC 69
+D +++SYEELLAL + +GT GLS++ + L +N + G S + DSC IC
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTIC 431
Query: 70 RLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
+ +Y + + + L C H YH+EC+ WL I VCP+C E
Sbjct: 432 QENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT5G52140.1 | Symbols: | protein binding / zinc ion binding |
chr5:21184566-21186872 REVERSE
Length = 280
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Query: 14 EEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSS---------QNGSND 64
E DP+ ++YEEL LG+ VG +GLS + I+ L + + + + ++D
Sbjct: 172 ENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADD 231
Query: 65 S-CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
S C IC ++Y G+ +T L CKH YH +CI+ WLK NKVC +C EV
Sbjct: 232 SQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT1G53190.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:19838072-19840003 FORWARD
Length = 494
Score = 79.7 bits (195), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 16 VDPDELSYEELLALGEVVGTESRGLSADTIA------SLPSVNFKAGSSQNGSND----S 65
+D +E+SYEELLAL E +GT + GL + + + +NF+ SS + D
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
C IC+ + + E + L C H YH+EC+ WL + VCP+C E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT1G53190.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:19838072-19840003 FORWARD
Length = 494
Score = 79.7 bits (195), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 16 VDPDELSYEELLALGEVVGTESRGLSADTIA------SLPSVNFKAGSSQNGSND----S 65
+D +E+SYEELLAL E +GT + GL + + + +NF+ SS + D
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
C IC+ + + E + L C H YH+EC+ WL + VCP+C E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT5G42940.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:17216649-17219171 REVERSE
Length = 691
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIAS-LPSVNFKAGSSQNGSNDSCVICRLDY 73
+D D +SYEELLAL E +G G++ +TI++ L +K+ + + C +C+ +Y
Sbjct: 585 RLDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEY 644
Query: 74 DDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
+GE + L C H +HS+CI +WLK +CP+C
Sbjct: 645 TEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677
>AT4G34040.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:16304638-16307503 REVERSE
Length = 666
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSN---DSCVICRL 71
+D D +SYEELLALGE +G S GLS + I + K SS GS+ + C +C+
Sbjct: 566 RLDVDNMSYEELLALGERIGDVSTGLSEEVILKV-MKQHKHTSSAAGSHQDMEPCCVCQE 624
Query: 72 DYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
+Y +G+ L L C H +H+ C+ WL + +CP+C
Sbjct: 625 EYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659
>AT2G15530.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:6774150-6777068 FORWARD
Length = 704
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 6 LLNLQDAWEEV--DPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSN 63
+ ++ D E+ D D +SYEELLALGE +G S GLS + I L ++ +S + S+
Sbjct: 589 MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI--LKAMKQHKHTSSSPSS 646
Query: 64 -------DSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
+ C IC+ +Y +G+ L L C H +H +CI W+ I +CP+C E
Sbjct: 647 VELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEA 700
>AT2G15530.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:6774150-6777068 FORWARD
Length = 704
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 6 LLNLQDAWEEV--DPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSN 63
+ ++ D E+ D D +SYEELLALGE +G S GLS + I L ++ +S + S+
Sbjct: 589 MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI--LKAMKQHKHTSSSPSS 646
Query: 64 -------DSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
+ C IC+ +Y +G+ L L C H +H +CI W+ I +CP+C E
Sbjct: 647 VELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEA 700
>AT2G15530.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:6774150-6777068 FORWARD
Length = 704
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 6 LLNLQDAWEEV--DPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSN 63
+ ++ D E+ D D +SYEELLALGE +G S GLS + I L ++ +S + S+
Sbjct: 589 MTDMHDRHREMRLDVDNMSYEELLALGERIGDVSTGLSEEVI--LKAMKQHKHTSSSPSS 646
Query: 64 -------DSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
+ C IC+ +Y +G+ L L C H +H +CI W+ I +CP+C E
Sbjct: 647 VELHQNIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEA 700
>AT5G10650.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:3365237-3367263 REVERSE
Length = 525
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGS-------NDSCV 67
+D D +SYEELLALG+ +GT S LS + ++ + + + GS + C
Sbjct: 417 RLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCS 476
Query: 68 ICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
IC+ +Y DG+ L + C+H YH C+ WL++ CP+C
Sbjct: 477 ICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPIC 515
>AT5G10650.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:3365237-3367263 REVERSE
Length = 525
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGS-------NDSCV 67
+D D +SYEELLALG+ +GT S LS + ++ + + + GS + C
Sbjct: 417 RLDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCS 476
Query: 68 ICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
IC+ +Y DG+ L + C+H YH C+ WL++ CP+C
Sbjct: 477 ICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPIC 515
>AT4G31450.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:15255955-15257977 REVERSE
Length = 497
Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIAS-----------LPSVNFKAGSSQNGSN 63
+D D +SYEELLAL E +GT S L+ + I+ L + S N +
Sbjct: 386 RLDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKED 445
Query: 64 DSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
C IC+ +Y G+ + L C+H+YH +C+ +WL+I CP+C +S
Sbjct: 446 AKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAETS 495
>AT5G24870.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:8545008-8546923 REVERSE
Length = 520
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 3 SHLLLNLQDAWEE------VDPDELSYEELLALGEVVGTESRGLSADTI-ASLPSVNFKA 55
++L LN ++ + +D D +SYEELLAL E +GT S LS + + SL S ++
Sbjct: 392 TNLFLNGMSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRP 451
Query: 56 GSSQ-----NGSND-SCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
N +D C IC+ +Y DG+ + L C+H YH C WL++ CP+C
Sbjct: 452 NDESDDICLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTS 511
Query: 110 VSSS*H 115
S H
Sbjct: 512 AESQPH 517
>AT5G24870.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:8545008-8546923 REVERSE
Length = 520
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 3 SHLLLNLQDAWEE------VDPDELSYEELLALGEVVGTESRGLSADTI-ASLPSVNFKA 55
++L LN ++ + +D D +SYEELLAL E +GT S LS + + SL S ++
Sbjct: 392 TNLFLNGMSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRP 451
Query: 56 GSSQ-----NGSND-SCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
N +D C IC+ +Y DG+ + L C+H YH C WL++ CP+C
Sbjct: 452 NDESDDICLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTS 511
Query: 110 VSSS*H 115
S H
Sbjct: 512 AESQPH 517
>AT5G07225.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2268642-2270227 REVERSE
Length = 234
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLK 98
GL+ I+ LP++ FK + C+IC DY G+ LT+L C H YH +CI+ WL+
Sbjct: 165 GLTEGQISQLPTIKFKPSLE----DKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQ 220
Query: 99 INKVCPVCSKEV 110
+K+C VC +EV
Sbjct: 221 NSKLCCVCQREV 232
>AT1G45180.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:17099335-17101683 FORWARD
Length = 645
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIAS-LPSVNFKAGSSQNGSNDSCVICRLDY 73
+D D ++YEELL+L E +G GL+ +TI++ L +K+ + + + C +C+ +Y
Sbjct: 540 RLDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSSTRSSQEVEPCCVCQEEY 599
Query: 74 DDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
+ E + L C H +HS+CI +WLK +CP+C
Sbjct: 600 KEEEEIGRLECGHDFHSQCIKEWLKQKNLCPIC 632
>AT5G67120.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:26787830-26789737 REVERSE
Length = 272
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 19 DELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGET 78
D +YEELL++ + G E GLS + I + K + CVIC+ D E
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDE-NLIRRKYEKRSDDETKRCVICQQKLKDNEE 239
Query: 79 LTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
++ L C H +H CI +WL + CP+C++EV
Sbjct: 240 VSKLGCGHDFHFGCIKNWLMVTNKCPLCNREV 271
>AT4G26580.1 | Symbols: | protein binding / zinc ion binding |
chr4:13411705-13412889 REVERSE
Length = 335
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 33 VGTESRGLSADTIASLPSVNFK-----AGSSQNGSNDSCVICRLDYDDGETLTVLSCKHS 87
VG+ +G S D I+SLPS +K + SSQ ++ C IC Y + E + L C H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 88 YHSECINDWLKINKVCPVCSKEV 110
+H +C++ WL+I CP+C +++
Sbjct: 311 FHLKCVDQWLRIISCCPLCKQDL 333
>AT1G80400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:30225864-30227360 FORWARD
Length = 407
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 23/102 (22%)
Query: 35 TESRGLSADTIASLPSVNFKAGSSQN-----------------------GSNDSCVICRL 71
+++RG +A+ I +LP FK+ S + G + SC IC
Sbjct: 301 SQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLT 360
Query: 72 DYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
Y D E + L C H +H +C++ WLKIN CP+C EV S
Sbjct: 361 RYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGES 402
>AT4G32600.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:15724010-15725737 FORWARD
Length = 453
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 35 TESRGLSADTIASLPSVNFKAGSSQ-----NGSNDS---------------------CVI 68
T+ RG + ++I +LP+ FK S+ NGS+ S C I
Sbjct: 306 TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCI 365
Query: 69 CRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C Y + E L L C H +H EC++ WLKIN CP+C EV
Sbjct: 366 CLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>AT1G17970.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6185032-6187202 FORWARD
Length = 368
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 10 QDAWEEV--DPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCV 67
+D + E+ D D +SYE+LL LG+ +G + GL I K S + C
Sbjct: 263 RDNYHELRLDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLG-KIKPSVSHTLVDRKCS 321
Query: 68 ICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSK 108
IC+ +Y+ + + L+C HS+H C+ WL CPVC K
Sbjct: 322 ICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKK 362
>AT1G22670.1 | Symbols: | protease-associated zinc finger
(C3HC4-type RING finger) family protein |
chr1:8021854-8023516 REVERSE
Length = 422
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWL- 97
G+ T+ ++PSV F N + SC IC DY G+ L VL C H +H C++ WL
Sbjct: 205 GMCRRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLI 264
Query: 98 KINKVCPVCSKEVSSS 113
CPVC ++ ++
Sbjct: 265 SWRTFCPVCKRDARTT 280
>AT1G73760.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27739366-27741161 REVERSE
Length = 367
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 19 DELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGET 78
D ++YE+LL LGE +G + GL+ I S ++ C+IC+ +Y+ +
Sbjct: 272 DNMTYEQLLELGERIGHVNTGLTEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYEAKDE 331
Query: 79 LTVLSCKHSYHSECINDWLKINKVCPVC 106
+ L C H +H +C+N WL CPVC
Sbjct: 332 VGELRCGHRFHIDCVNQWLVRKNSCPVC 359
>AT2G37150.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:15603748-15605988 REVERSE
Length = 546
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVIC-RLDY 73
+D D +SYEELL LGE +G+ + GLS I+S S Q C IC
Sbjct: 441 RLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYK 500
Query: 74 DDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
+ E V C H YH CI WL + CP+C
Sbjct: 501 EKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
>AT2G37150.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:15603748-15605988 REVERSE
Length = 546
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 15 EVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVIC-RLDY 73
+D D +SYEELL LGE +G+ + GLS I+S S Q C IC
Sbjct: 441 RLDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYK 500
Query: 74 DDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
+ E V C H YH CI WL + CP+C
Sbjct: 501 EKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
>AT2G17450.1 | Symbols: RHA3A | RHA3A; protein binding / zinc ion
binding | chr2:7576640-7577197 REVERSE
Length = 185
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGS------NDSCVICRLDYDDGETLTVLS-CKHSYHS 90
+GL + SLP F A S +G+ + C IC D+ DGE + VL C HS+H
Sbjct: 68 KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHV 127
Query: 91 ECINDWLKINKVCPVCSK 108
ECI+ WL CP C +
Sbjct: 128 ECIDKWLVSRSSCPSCRR 145
>AT2G27940.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:11897963-11898742 FORWARD
Length = 237
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECINDW 96
RGL + + SLP + + Q N+ CVIC D+++GET+ V+ C H +H +C++ W
Sbjct: 114 RGLDSQAVRSLPVYRYTKAAKQR--NEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171
Query: 97 LKINKVCPVC 106
L CP+C
Sbjct: 172 LSSYVTCPLC 181
>AT5G55970.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:22668019-22669312 FORWARD
Length = 343
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 26 LLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGS----------NDSCVICRLDYDD 75
LL +G+ R S D I+SLPS FK + C IC Y D
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 76 GETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
E + L C H +HS+C++ WL+I CP+C +++
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:22668019-22669312 FORWARD
Length = 343
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 26 LLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGS----------NDSCVICRLDYDD 75
LL +G+ R S D I+SLPS FK + C IC Y D
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 76 GETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
E + L C H +HS+C++ WL+I CP+C +++
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT1G60360.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:22242748-22243731 REVERSE
Length = 327
Score = 59.3 bits (142), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 41 SADTIASLPSVNFKAGSSQNGSND--SCVICRLDYDDGETLTVLSCKHSYHSECINDWLK 98
S TI SLPSV + Q+ +ND C +C ++ G T L CKH YH +CI WL+
Sbjct: 200 SEPTINSLPSVKI---TPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLR 256
Query: 99 INKVCPVCSKEVS 111
+N CP+C +++
Sbjct: 257 LNNSCPICRRDLP 269
>AT5G66160.2 | Symbols: RMR1 | JR700; peptidase/ protein binding /
zinc ion binding | chr5:26445198-26446722 FORWARD
Length = 290
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 35 TESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECIN 94
T + L A + +LP F S+ + + ++C IC DY GE+L +L C+H++H CI+
Sbjct: 202 TRTIRLDAKLVHTLPCFTF-TDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCID 260
Query: 95 DWL-KINKVCPVCSKEVSS 112
WL K CPVC ++ +
Sbjct: 261 SWLTKWGTSCPVCKHDIRT 279
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | JR700; peptidase/ protein
binding / zinc ion binding | chr5:26445198-26446878
FORWARD
Length = 310
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 35 TESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECIN 94
T + L A + +LP F S+ + + ++C IC DY GE+L +L C+H++H CI+
Sbjct: 202 TRTIRLDAKLVHTLPCFTF-TDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCID 260
Query: 95 DWL-KINKVCPVCSKEVSS 112
WL K CPVC ++ +
Sbjct: 261 SWLTKWGTSCPVCKHDIRT 279
>AT3G10815.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3385009-3385608 REVERSE
Length = 199
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 19 DELSYEELLALGEVVGTESRGLSADTIASLPSVN-FKAGSSQNGSNDSCVICRLDYDDGE 77
++LS+EEL + + RG ++A++ S+ K G + C +C+ ++ G
Sbjct: 74 EQLSFEELFNRLPAL-QDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGS 132
Query: 78 TLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
+ CKH YHSECI WL CPVC KE+
Sbjct: 133 DARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQ 167
>AT5G27420.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:9684119-9685225 FORWARD
Length = 368
Score = 58.5 bits (140), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 34 GTESRGLSADTIASLPSVNFKAGSSQNGSNDS--CVICRLDYDDGETLTVL-SCKHSYHS 90
T +RGL A+TI + P+ + +Q + C IC +++D ETL +L C H +H
Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHP 149
Query: 91 ECINDWLKINKVCPVCSKEVS 111
CI WL+ + CPVC ++
Sbjct: 150 HCIGAWLQGHVTCPVCRTNLA 170
>AT4G35840.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:16981083-16982266 FORWARD
Length = 236
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 22 SYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSS--QNGSNDSCVICRLDYDDGETL 79
++EEL ++ + G S+GL+ D + +P + ++ +G+ DSC +C D+ GET+
Sbjct: 147 TFEELSSIFDTGG--SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETV 204
Query: 80 TVLS-CKHSYHSECINDWLKINKVCPVCSKEV 110
L C H +H CI++WL + CP+C +++
Sbjct: 205 RSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT1G35625.1 | Symbols: | peptidase/ protein binding / zinc ion
binding | chr1:13158466-13159260 REVERSE
Length = 201
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 40 LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWL-K 98
+ D + S+P+ + + ++ +C IC DY GE L +L CKH YH+ CI+ WL +
Sbjct: 90 MPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGR 149
Query: 99 INKVCPVCSK 108
CPVC +
Sbjct: 150 CRSFCPVCKQ 159
>AT2G35420.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:14899715-14900479 REVERSE
Length = 254
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIN 94
E+ GL I S P ++ + + +N + C IC ++ D +T+ +++ C+H +HS CI+
Sbjct: 74 ENTGLDPFIIRSFPVFHYSSATKKNHGTE-CAICLSEFSDEDTVRLITVCRHPFHSNCID 132
Query: 95 DWLKINKVCPVCSKEV 110
W +++K CPVC E+
Sbjct: 133 LWFELHKTCPVCRCEL 148
>AT1G71980.1 | Symbols: | protease-associated zinc finger
(C3HC4-type RING finger) family protein |
chr1:27098250-27099881 FORWARD
Length = 448
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECIND 95
E G+S + ++PS+ F + N + +C IC DY G+ L +L C H +H+ C++
Sbjct: 202 EFHGMSRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDS 261
Query: 96 WLKINKV-CPVCSKEVSSS 113
WL + CPVC ++ +S
Sbjct: 262 WLTSWRTFCPVCKRDARTS 280
>AT1G35330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:12965046-12966113 FORWARD
Length = 327
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 30 GEVVGTE--SRGLSADTIASLPSVNFK--AGSSQNGSNDSCVICRLDYDDGETLTVLS-C 84
GEV T SRGL D I S PS + G C IC +++D ETL ++ C
Sbjct: 88 GEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPC 147
Query: 85 KHSYHSECINDWLKINKVCPVC 106
H++H+ CI+ WL CPVC
Sbjct: 148 SHAFHASCIDVWLSSRSTCPVC 169
>AT3G30460.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:12104433-12104876 FORWARD
Length = 147
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 22 SYEELLALGEVVGTES---RGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGET 78
SY+E+ L V+G S R L+A LP V F A C ICR + E
Sbjct: 54 SYDEIFGL--VLGNSSSCTRWLNAG--EELPVVEFTAEEMMERGLVVCAICREELAANER 109
Query: 79 LTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS*H 115
L+ L C+H YH ECI++WL CP+C V H
Sbjct: 110 LSELPCRHYYHKECISNWLSNRNTCPLCRHNVELPNH 146
>AT1G04790.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:1345469-1348143 FORWARD
Length = 634
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 6 LLNLQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDS 65
LL++ + E D YE LLAL E G SA+ I +LP + + Q ++
Sbjct: 539 LLHMDRDFTEDD-----YELLLALDENNHRHG-GASANRINNLPESTVQTDNFQ----ET 588
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
CVIC G+T+ L C H +H +CI+ WL +K CPVC V+
Sbjct: 589 CVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSVT 634
>AT1G49220.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18205946-18206701 FORWARD
Length = 251
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 24 EELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS 83
E + +L G+ ++G+ + P V++ + G ++ CVIC D+ GE L +L
Sbjct: 93 EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLP 152
Query: 84 -CKHSYHSECINDWLKINKVCPVC 106
C H +H CI+ WL+ + CP C
Sbjct: 153 KCNHGFHVRCIDKWLQQHLTCPKC 176
>AT5G52150.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:21189988-21191303 REVERSE
Length = 200
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 31 EVVGTESRGLSADTIASLPSVNFK------AGSSQNGSNDSCVICRLDYDDGETLTVLSC 84
EVV E GL + I+ LP+ + + + C IC DY+ G+ +T+L C
Sbjct: 125 EVVNKE--GLPENIISGLPTQKYSRKTWWWSKKTFVPDRKECSICIADYEKGDKITILPC 182
Query: 85 KHSYHSECINDWLKINKV 102
KH++H +CI +WLK NKV
Sbjct: 183 KHAFHKDCIANWLKENKV 200
>AT3G18773.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6466304-6466966 FORWARD
Length = 220
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDW 96
+G+ + LP VN+ + G + CVIC D+ GE L VL C H +H CI+ W
Sbjct: 102 KGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKW 161
Query: 97 LKINKVCPVC 106
L + CP C
Sbjct: 162 LTQHMTCPKC 171
>AT1G18780.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6476258-6477235 REVERSE
Length = 325
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 44 TIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVC 103
T+ +L +K S ND C IC ++DDG ++ L C H + EC+ +W + VC
Sbjct: 255 TVGALNRKTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVC 314
Query: 104 PVCSKEV 110
P+C E+
Sbjct: 315 PLCRLEL 321
>AT1G35630.1 | Symbols: | protease-associated zinc finger
(C3HC4-type RING finger) family protein |
chr1:13163041-13164484 REVERSE
Length = 318
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 40 LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWL-K 98
+ D + S+P+ + ++ ++ +C IC DY GE L +L CKH YH+ CI+ WL +
Sbjct: 207 MPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGR 266
Query: 99 INKVCPVCSK 108
CPVC +
Sbjct: 267 CRSFCPVCKQ 276
>AT1G32361.1 | Symbols: ATL1F | ATL1F; protein binding / zinc ion
binding | chr1:11675531-11676529 FORWARD
Length = 332
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIN 94
E+ GL + I S P + S ++ D C IC ++ D +T+ ++S C HS+H+ CI+
Sbjct: 127 ENLGLDSKIIESFPEYPY---SVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICID 183
Query: 95 DWLKINKVCPVCSKEV 110
W + +K CPVC +E+
Sbjct: 184 LWFEGHKTCPVCRREL 199
>AT1G49200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18198298-18198978 FORWARD
Length = 226
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 24 EELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL- 82
E + L G+ ++G++ + P V++ + G + CVIC D+ GE + +L
Sbjct: 94 EPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLP 153
Query: 83 SCKHSYHSECINDWLKINKVCPVC 106
C H +H CI+ WL+ + CP C
Sbjct: 154 KCHHGFHVRCIDKWLQQHLTCPKC 177
>AT2G17730.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:7704142-7705312 FORWARD
Length = 241
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGS--NDSCVICRLDYDDGETLTVLS-CKHSYHSECI 93
S+GL+ D + +P + ++ + S DSC +C D+ GET+ L C H +H CI
Sbjct: 165 SKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCI 224
Query: 94 NDWLKINKVCPVCSKEV 110
++WL + CP+C +++
Sbjct: 225 DNWLLRHGSCPMCRRDI 241
>AT5G46650.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:18930443-18931312 FORWARD
Length = 289
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 9 LQDAWEEVDPDELSYEELLALGEVVGTE-SRGLSADTIASLPSVNFKAGS--SQNGSNDS 65
L +AW + L ++ A E V + GL I S P F + ++
Sbjct: 54 LTEAWNHHYHNGLPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLE 113
Query: 66 CVICRLDYDDGETLTVL--SCKHSYHSECINDWLKINKVCPVCSK 108
C IC L++++ L L +C H +H ECI+ WL+ NK CPVC +
Sbjct: 114 CAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRR 158
>AT4G09130.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:5815849-5816922 FORWARD
Length = 357
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 38 RGLSADTIASLPSVNF---KAGSSQNGSNDSCVICRLDYDDGETLT-VLSCKHSYHSECI 93
RG+ D I S P+ + KA NG + C IC +++D E L + C H++H+ CI
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVE-CAICLCEFEDEEPLRWMPPCSHTFHANCI 148
Query: 94 NDWLKINKVCPVCSKEVS 111
++WL CPVC +S
Sbjct: 149 DEWLSSRSTCPVCRANLS 166
>AT3G05200.1 | Symbols: ATL6 | ATL6; protein binding / zinc ion
binding | chr3:1477377-1478573 FORWARD
Length = 398
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 33 VGTESRGLSADTIASLPSVNFKAGSSQN-GSND-SCVICRLDYDDGETLTVL-SCKHSYH 89
V +RGL + + P+ + +Q G + C IC +++D ETL +L C H +H
Sbjct: 93 VNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFH 152
Query: 90 SECINDWLKINKVCPVCSKEVS 111
CI+ WL+ + CPVC ++
Sbjct: 153 PHCIDAWLEAHVTCPVCRANLA 174
>AT4G09100.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:5811256-5811654 FORWARD
Length = 132
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 37 SRGLSADTIASLPSVNF-KAGSSQNGSND-SCVICRLDYDDGETLTVLS-CKHSYHSECI 93
RGL A+ I S PS + +A + G + CV+C ++ D ETL ++ C H +H++C+
Sbjct: 54 PRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCV 113
Query: 94 NDWLKINKVCPVCSKEV 110
+ WL + CP+C +V
Sbjct: 114 DIWLSHSSTCPICRAKV 130
>AT3G47990.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17713367-17716051 REVERSE
Length = 358
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 23/96 (23%)
Query: 31 EVVGTESRGLSADT--------------------IASLPSVNFKAGSSQNGSNDSCVICR 70
E G E RG+S D I LP KA G C+IC
Sbjct: 183 EAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGE---CLICL 239
Query: 71 LDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
++ G + L C H++H ECI+ WL++N CP C
Sbjct: 240 EEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRC 275
>AT2G29840.1 | Symbols: | protein binding / zinc ion binding |
chr2:12732387-12733983 REVERSE
Length = 293
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 44 TIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVC 103
+ SL +K S G N+ C IC ++DDG ++ L C H + EC W + N C
Sbjct: 222 AVESLNRKTYKKASDVVGENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDC 281
Query: 104 PVC 106
P+C
Sbjct: 282 PLC 284
>AT3G20395.1 | Symbols: | protein binding / zinc ion binding |
chr3:7112020-7113792 REVERSE
Length = 223
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIN 94
E +GLS +I ++P S++ + SC IC D+++GE L+ C H++H CI+
Sbjct: 144 EKKGLSKSSIQNIPMFY---NRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCID 200
Query: 95 DWLKINKVCPVCSKEVS 111
+WL + CP+C +S
Sbjct: 201 EWLLRQETCPICRDHLS 217
>AT1G49850.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18455326-18456444 REVERSE
Length = 250
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 10 QDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVIC 69
+ ++ +D D + L + + +GL+ D I L F + ++ D C IC
Sbjct: 148 ESSFHSIDGDPIFQLAGLQVTYECNKKPQGLTQDAINCLHRQTFSSAEVKSEMRD-CSIC 206
Query: 70 RLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
+ G+ L L C HS+HS C+N WL+ CP C + ++
Sbjct: 207 LESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAIA 248
>AT1G20823.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:7238880-7239473 FORWARD
Length = 197
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 33 VGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSE 91
V ++GL + SLP + F S ++ C IC ++ G+ L VL C H +H
Sbjct: 78 VAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVA 137
Query: 92 CINDWLKINKVCPVCSK 108
CI+ WL + CP C +
Sbjct: 138 CIDTWLGSHSSCPSCRQ 154
>AT3G61180.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:22645680-22647290 FORWARD
Length = 379
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC Y+DG L L C+H +HS C++ WL+IN CP+C +
Sbjct: 323 CSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNI 367
>AT5G43420.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:17451790-17452917 FORWARD
Length = 375
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGS-------------NDSCVICRLDYDDGETLTVL- 82
SRGL I ++P FK QN + C +C ++ D E L ++
Sbjct: 96 SRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIP 155
Query: 83 SCKHSYHSECINDWLKINKVCPVCSKEVS 111
+C H +H +CI+ WL+ N CP+C VS
Sbjct: 156 NCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
>AT5G45290.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:18350011-18352092 REVERSE
Length = 545
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 43 DTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLK-INK 101
D + LP + S++ S C IC ++Y++ +++ L C H +H C++ WLK I++
Sbjct: 469 DVVDLLPIKLYTKSQSEDPSQ--CYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHR 526
Query: 102 VCPVCSKEV 110
VCP+C ++
Sbjct: 527 VCPLCRGDI 535
>AT3G14320.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4777731-4778345 REVERSE
Length = 204
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIN 94
E G+ + S+P V+F + CV+C + DG+ VL SC H +H ECI+
Sbjct: 60 ERVGIKPYVLRSIPIVDFNTKDFKYVLE--CVVCLSELADGDKARVLPSCDHWFHVECID 117
Query: 95 DWLKINKVCPVCSKEV 110
WL+ N CP+C K V
Sbjct: 118 SWLQSNSTCPICRKRV 133
>AT1G36950.1 | Symbols: | zinc finger protein-related |
chr1:14009673-14010822 REVERSE
Length = 226
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 11 DAWEE--VDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVI 68
D ++E +D D ++YE+LL L +G E+ + A I N K Q+ ++ C I
Sbjct: 24 DPYQELRMDTDHMTYEQLLQLCNSMGYENSSVKASNIDRC-FRNTKPSEFQSLADKICCI 82
Query: 69 CRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS*HS 116
C+ + + L+C H++H + W+ K CPVC K H
Sbjct: 83 CQDRFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVCQKTAHDDEHQ 130
>AT1G68070.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:25515412-25516767 REVERSE
Length = 343
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC Y+DG L L C H +HS CI WLK+N CP+C +
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>AT1G49210.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18201994-18202671 FORWARD
Length = 225
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIND 95
++G+ + P V++ + G + CVIC D+ GE L +L C H +H CI+
Sbjct: 106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDK 165
Query: 96 WLKINKVCPVC 106
WL+ + CP C
Sbjct: 166 WLQHHLTCPKC 176
>AT3G16720.1 | Symbols: ATL2 | ATL2; protein binding / zinc ion
binding | chr3:5692880-5693794 FORWARD
Length = 304
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
SRGL + I SLP F + ++ C +C ++++ ET VL C+H++H +CI+
Sbjct: 92 SRGLDPNVIKSLPVFTFSDETHKDPIE--CAVCLSEFEESETGRVLPNCQHTFHVDCIDM 149
Query: 96 WLKINKVCPVCSKEVSS 112
W + CP+C V S
Sbjct: 150 WFHSHSTCPLCRSLVES 166
>AT5G05810.1 | Symbols: ATL43 | ATL43; protein binding / zinc ion
binding | chr5:1746938-1747999 FORWARD
Length = 353
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
G+ I SLP F A S + C +C ++ E L +L CKH++H EC++ WL
Sbjct: 66 GIDRSVIESLPVFRFGALSGHKDGLE-CAVCLARFEPTEVLRLLPKCKHAFHVECVDTWL 124
Query: 98 KINKVCPVCSKEV 110
+ CP+C V
Sbjct: 125 DAHSTCPLCRYRV 137
>AT5G08139.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2616487-2617617 FORWARD
Length = 376
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 45 IASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCP 104
+ +LP V + + +G C +C+ + + G L C H YHSECI WLK+ CP
Sbjct: 289 LNNLPVVLLEGENDDDGGL-VCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCP 347
Query: 105 VCSKEVSS 112
VC E+ +
Sbjct: 348 VCRYELPT 355
>AT2G40830.3 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 328
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 23 YEELLALGEVVGTESRGLSA---DTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETL 79
+E+L A GT RG I +LP++ A S+ +C +C+ +++ G
Sbjct: 150 FEQLSA-----GTTRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEA 203
Query: 80 TVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
+ C H YHS+CI WL + CPVC +E+ S+
Sbjct: 204 KQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>AT2G40830.1 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 328
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 23 YEELLALGEVVGTESRGLSA---DTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETL 79
+E+L A GT RG I +LP++ A S+ +C +C+ +++ G
Sbjct: 150 FEQLSA-----GTTRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEA 203
Query: 80 TVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
+ C H YHS+CI WL + CPVC +E+ S+
Sbjct: 204 KQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>AT2G40830.2 | Symbols: RHC1A | RHC1A; protein binding / zinc ion
binding | chr2:17043642-17044628 FORWARD
Length = 328
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 23 YEELLALGEVVGTESRGLSA---DTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETL 79
+E+L A GT RG I +LP++ A S+ +C +C+ +++ G
Sbjct: 150 FEQLSA-----GTTRRGPPPAPRSAIDALPTIKI-AQRHLRSSDSNCPVCKDEFELGSEA 203
Query: 80 TVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
+ C H YHS+CI WL + CPVC +E+ S+
Sbjct: 204 KQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSA 237
>AT5G66070.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:26421923-26423033 FORWARD
Length = 221
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
S+GL+ D++ +P V S + SC +C D+ GET+ L C H +H CI+
Sbjct: 150 SKGLTGDSLNRIPKVRITDTSPEI---VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDK 206
Query: 96 WLKINKVCPVCSKEV 110
WL+ + CP+C + +
Sbjct: 207 WLRRHASCPLCRRHL 221
>AT2G35910.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:15073225-15073878 REVERSE
Length = 217
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECINDWL 97
GL DTI S P + + ++ C IC DY L L C H +H +CI+ WL
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTAS-CCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWL 179
Query: 98 KINKVCPVC 106
++N CPVC
Sbjct: 180 RLNPTCPVC 188
>AT5G66070.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:26421923-26423033 FORWARD
Length = 245
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
S+GL+ D++ +P V S + SC +C D+ GET+ L C H +H CI+
Sbjct: 174 SKGLTGDSLNRIPKVRITDTSPEI---VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDK 230
Query: 96 WLKINKVCPVCSKEV 110
WL+ + CP+C + +
Sbjct: 231 WLRRHASCPLCRRHL 245
>AT2G01735.1 | Symbols: RIE1 | RIE1 (RING-FINGER PROTEIN FOR
EMBRYOGENESIS); protein binding / zinc ion binding |
chr2:324499-325895 FORWARD
Length = 359
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 28/108 (25%)
Query: 29 LGEVVGTESRGLSADTIASLPSVNFKAGSSQ---------------NG-----------S 62
L V GTE G+S + LP FKA S NG
Sbjct: 246 LYAVAGTE--GVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAE 303
Query: 63 NDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
+ C IC Y+DG L L C H +HS CI WLK+ CP+C +
Sbjct: 304 DADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>AT1G74620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:28028252-28029001 FORWARD
Length = 249
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 55 AGSSQNGSNDSCVICRLDYDDGETLTV-LSCKHSYHSECINDWLKINKVCPVCSKEV 110
A + +NG C IC DY +G ++ L C H +H +CIN WL++N +CP+C +
Sbjct: 176 ATTEENG----CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT4G09120.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:5813998-5815035 FORWARD
Length = 345
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 24 EELLALGEVV--GTESRGLSADTIASLPSVNFK--AGSSQNGSNDSCVICRLDYDDGETL 79
EE+ A G+ V RGL + I S P+ + G C IC +++D ETL
Sbjct: 77 EEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETL 136
Query: 80 TVLS-CKHSYHSECINDWLKINKVCPVCSKEVS 111
+ C H++H+ CI+ WL CPVC +S
Sbjct: 137 RWMPPCSHTFHANCIDVWLSSWSTCPVCRANLS 169
>AT3G19950.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6942853-6943839 FORWARD
Length = 328
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 34 GTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECI 93
GT SA I +LP+V ++ N C +C +++DG + + CKH +H +C+
Sbjct: 187 GTPPASKSA--IDALPTVKVTKDMLKSEMN-QCAVCMDEFEDGSDVKQMPCKHVFHQDCL 243
Query: 94 NDWLKINKVCPVCSKEVSS 112
WL+++ CPVC E+ +
Sbjct: 244 LPWLELHNSCPVCRFELPT 262
>AT1G04360.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:1167507-1168652 REVERSE
Length = 381
Score = 51.6 bits (122), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 37 SRGLSADTIASLPSVNFK-----AGSS-QNGSNDSCVICRLDYDDGETLTVL-SCKHSYH 89
+RGL I ++P FK AG Q+ ++ C +C ++ + E L ++ +C H +H
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 90 SECINDWLKINKVCPVCSKEVS 111
+CI+ WL+ N CP+C VS
Sbjct: 159 IDCIDIWLQGNANCPLCRTSVS 180
>AT2G46160.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:18963109-18963753 FORWARD
Length = 214
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 25 ELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSN-------DSCVICRLDYDDGE 77
E L G+VV GL I S P +F +S S+ +C IC +Y + E
Sbjct: 94 EDLEAGDVV----VGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAE 149
Query: 78 TLTVLS-CKHSYHSECINDWLKINKVCPVC 106
L ++ CKH +H C++ WLK+N CPVC
Sbjct: 150 MLRMMPECKHYFHLCCLDAWLKLNGSCPVC 179
>AT5G60820.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24469636-24470895 FORWARD
Length = 419
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
C +C+ + G+ + L C+H YHSECI WL I CPVC E+ S
Sbjct: 372 CAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPS 418
>AT2G25410.1 | Symbols: | protein binding / zinc ion binding |
chr2:10814470-10815917 FORWARD
Length = 377
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 39 GLSADTIASLPSVNF-KAGSSQNGSNDS-CVICRLDYDDGETLTVLS-CKHSYHSECIND 95
GL TI S V ++ GSND C IC +Y ET+ L C+H +H+ECI+
Sbjct: 298 GLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDA 357
Query: 96 WLKINKVCPVC 106
WLK++ CPVC
Sbjct: 358 WLKLHSSCPVC 368
>AT3G58720.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21716920-21717892 REVERSE
Length = 238
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 57 SSQNGSNDS-------CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
SS+N N S C +C D++ ET+ + CKH +H ECI WLK CPVC
Sbjct: 128 SSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVC 184
>AT2G42350.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:17639245-17639898 FORWARD
Length = 217
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 27 LALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCK 85
L+ V RGL + IASLP+ F G + + C +C ++ + +L +CK
Sbjct: 63 LSFSVVSQPPKRGLDSLVIASLPT--FVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCK 120
Query: 86 HSYHSECINDWLKINKVCPVCSKEVSSS 113
H +H C++ WL CPVC E S
Sbjct: 121 HVFHVSCVDTWLTTQSTCPVCRTEAEPS 148
>AT4G17245.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:9669383-9669883 FORWARD
Length = 166
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 49 PSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL-KINKVCPVC 106
P++ + G + G+ C+IC ++ DG+TL VL CKH +H CI WL + CP C
Sbjct: 85 PTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTC 144
Query: 107 SKEVSSS 113
+ SS
Sbjct: 145 RTNIFSS 151
>AT5G47610.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19301399-19301899 REVERSE
Length = 166
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 41 SADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWLKI 99
+A + + P++ + + G+ C IC +++ GE++ VL C+H +H +CI+ WL
Sbjct: 82 AASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLST 141
Query: 100 NKVCPVCSKEVSS 112
CP C + S
Sbjct: 142 RSSCPTCRTSIFS 154
>AT2G42360.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:17640907-17641617 FORWARD
Length = 236
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGSNDSCVIC-RLDYDDGETLTVLSCKHSYHSECINDW 96
RGL+ IASLP+ A S C +C + + + + +CKH +H +C++ W
Sbjct: 80 RGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTW 139
Query: 97 LKINKVCPVCSKEV 110
L CPVC EV
Sbjct: 140 LTTCSTCPVCRTEV 153
>AT1G72200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27169935-27171149 REVERSE
Length = 404
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDS--CVICRLDYDDGETLTVL-SCKHSYHSEC 92
++RGL A I + P+ + + ++ C +C +++D ETL ++ C H +H C
Sbjct: 112 QARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGC 171
Query: 93 INDWLKINKVCPVCSKEV 110
I+ WL+ + CP+C ++
Sbjct: 172 IDAWLRSHTTCPLCRADL 189
>AT1G72310.1 | Symbols: ATL3 | ATL3; protein binding / zinc ion
binding | chr1:27226405-27227379 FORWARD
Length = 324
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
GL++ ++SLP V F+ S ++G C IC + G+ +L C HS+H ECI+ W
Sbjct: 102 GLTSFELSSLPIVFFRQDSCKDGLE--CSICLSELVKGDKARLLPKCNHSFHVECIDMWF 159
Query: 98 KINKVCPVCSKEV 110
+ + CP+C V
Sbjct: 160 QSHSTCPICRNTV 172
>AT1G26800.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:9285576-9286190 REVERSE
Length = 204
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 41 SADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKIN 100
S +I ++P V +G CVIC ++ ET+ + CKH +H CI WL +
Sbjct: 94 SKASIDAMPIVEI------DGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFH 147
Query: 101 KVCPVCSKEV 110
CPVC E+
Sbjct: 148 GSCPVCRYEM 157
>AT4G28890.1 | Symbols: | protein binding / ubiquitin-protein
ligase/ zinc ion binding | chr4:14256437-14257735
REVERSE
Length = 432
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 39 GLSADTIASLPSVNFKA--GSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIND 95
GL I SLP F A GS Q C +C ++ E L +L C+H++H CI+
Sbjct: 97 GLDKTAIESLPLFRFSALKGSKQGLD---CSVCLSKFESVEILRLLPKCRHAFHIGCIDQ 153
Query: 96 WLKINKVCPVCSKEVS 111
WL+ + CP+C VS
Sbjct: 154 WLEQHATCPLCRDRVS 169
>AT1G74410.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27965723-27967681 FORWARD
Length = 223
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 1 NSSHLLLNLQDAWEEVDPDELSYEELL-ALGEVVGTESRGLSADTIASLPSVNFKAGSSQ 59
NS H L + D +SYEE GE+ E+RGLS D++ LP + +
Sbjct: 123 NSHHWQLRISD---------VSYEEREDVYGEL---EARGLSGDSLRKLPCYIMSSEMVR 170
Query: 60 NGSNDSCVICRLDYDDGE-TLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC D GE T ++ C H++H C++ WL + CP+C + V
Sbjct: 171 RQVTH-CTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>AT4G09560.1 | Symbols: | peptidase/ protein binding / zinc ion
binding | chr4:6041652-6043681 REVERSE
Length = 448
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 34 GTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECI 93
G + + I +P+ F + ++ C IC +Y+ G+ L +L C H +H C+
Sbjct: 202 GNDFHRMPKSMIIRMPTTIFNGICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACV 261
Query: 94 NDWLKINK-VCPVCSKEVSS 112
+ WL K CPVC ++ S
Sbjct: 262 DLWLGQRKSFCPVCKRDARS 281
>AT2G20030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:8647813-8648985 FORWARD
Length = 390
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 39 GLSADTIASLPSVNFKA--GSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIND 95
GL I SLP F A G Q C +C ++D E L +L C+H++H CI+
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQGLE---CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQ 154
Query: 96 WLKINKVCPVCSKEV 110
WL+ + CP+C V
Sbjct: 155 WLEQHATCPLCRNRV 169
>AT1G28040.1 | Symbols: | protein binding / zinc ion binding |
chr1:9773580-9774910 REVERSE
Length = 299
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 30 GEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDS-CVICRLDYDDGETLTVLS-CKHS 87
G VV T GL TI S V G+N C IC +Y ET+ + C H
Sbjct: 219 GVVVTT---GLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHC 275
Query: 88 YHSECINDWLKINKVCPVC 106
+H +CI++WLKI+ CPVC
Sbjct: 276 FHVQCIDEWLKIHSSCPVC 294
>AT3G55530.1 | Symbols: SDIR1 | SDIR1 (SALT- AND DROUGHT-INDUCED
RING FINGER1); protein binding / ubiquitin-protein
ligase/ zinc ion binding | chr3:20595300-20597188
REVERSE
Length = 273
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 31/135 (22%)
Query: 7 LNLQDAWEEVDPDELSYEELLAL-GEVVGTESRGLSADTIASLPSVNFK----------- 54
L LQ A + + D+L YE L AL + V T S +S + I +LP +K
Sbjct: 125 LRLQLALLDREFDDLDYETLRALDSDNVSTTS--MSEEEINALPVHKYKVLDPENGCSLA 182
Query: 55 ---------------AGSSQNGSND--SCVICRLDYDDGETLTVLSCKHSYHSECINDWL 97
A S+ G+ D +C +C GE + L C H +H+ CI+ WL
Sbjct: 183 KQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWL 242
Query: 98 KINKVCPVCSKEVSS 112
+ CPVC S
Sbjct: 243 RQQGTCPVCKFRAHS 257
>AT4G11680.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:7053737-7055516 REVERSE
Length = 390
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC +Y+DG L L C H +H CI+ WL IN CP+C +
Sbjct: 338 CCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>AT4G17920.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:9963221-9964090 REVERSE
Length = 289
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 39 GLSADTIASLPSVNFKAGS--SQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
GL I S P+ + + + C IC L++D L +L+ C H +H ECI+
Sbjct: 81 GLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDL 140
Query: 96 WLKINKVCPVCSKEV 110
W + ++ CPVC +++
Sbjct: 141 WFESHRTCPVCRRDL 155
>AT3G18930.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6524110-6525345 REVERSE
Length = 411
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 39 GLSADTIASLPSVNFKA---------GSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSY 88
GL I +LP + A G + + C +C L++++G+ + L C H++
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 89 HSECINDWLKINKVCPVCSKEVSSS 113
H ECI++WL+ + CP+C + S
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGS 204
>AT3G18930.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:6524110-6525345 REVERSE
Length = 411
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 39 GLSADTIASLPSVNFKA---------GSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSY 88
GL I +LP + A G + + C +C L++++G+ + L C H++
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 89 HSECINDWLKINKVCPVCSKEVSSS 113
H ECI++WL+ + CP+C + S
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGS 204
>AT3G02340.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:477032-478261 FORWARD
Length = 409
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 23 YEELLALGEVVGTES--RG---LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGE 77
Y+ LG++ E+ RG + I LP V G+N C +C+ + E
Sbjct: 288 YDADAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKGNN-VCAVCKDEMLVEE 346
Query: 78 TLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
+ L C H YH ECI WL I CPVC E+ +
Sbjct: 347 KVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPT 381
>AT2G46495.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:19080254-19085704 REVERSE
Length = 878
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGSND-SCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
RGL TI + + +G+N C IC +Y ET+ + C H +H ECI+
Sbjct: 803 RGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDV 862
Query: 96 WLKINKVCPVC 106
WLKI+ CP+C
Sbjct: 863 WLKIHGSCPLC 873
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 31 EVVGTESRGLSADTIASLPSVNFKAGSSQNGSND-SCVICRLDYDDGETLTVLS-CKHSY 88
EV+ T RGL TI ++ G+N C IC +Y ET+ + C H +
Sbjct: 581 EVMAT--RGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCF 638
Query: 89 HSECINDWLKINKVCPVC 106
H++CI+ WLKI+ CP+C
Sbjct: 639 HAKCIDVWLKIHGSCPLC 656
>AT5G06490.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:1977996-1978589 REVERSE
Length = 197
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 31 EVVGTESRGLSADTIASLPSVNFKAG------SSQNGSNDSCVICRLDYDDGETLTVLS- 83
+ V E GL+ + I P + ++ ++ + C IC DY + + VL
Sbjct: 88 DTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPD 147
Query: 84 CKHSYHSECINDWLKINKVCPVC 106
C H +H C++ WL+++ CPVC
Sbjct: 148 CNHLFHDNCVDPWLRLHPTCPVC 170
>AT4G10160.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:6336023-6337301 FORWARD
Length = 225
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 33 VGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSE 91
+ T GLS D LP V +K + N + C +C DY E L + SC H++H E
Sbjct: 66 LSTAELGLSKDIREMLPIVIYKESFTVNDTQ--CSVCLGDYQAEEKLQQMPSCGHTFHME 123
Query: 92 CINDWLKINKVCPVC 106
CI+ WL + CP+C
Sbjct: 124 CIDLWLTSHTTCPLC 138
>AT5G15820.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:5161787-5162833 FORWARD
Length = 348
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
C IC+ + E + L CKH YH ECI WL I CPVC E+ +
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPT 337
>AT5G17600.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:5800029-5801117 REVERSE
Length = 362
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 24 EELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL- 82
E + + + T GL+ I S+ +K+G +D C +C ++++ E+L +L
Sbjct: 101 EGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSD-CSVCLSEFEENESLRLLP 159
Query: 83 SCKHSYHSECINDWLKINKVCPVCSKEVS 111
C H++H CI+ WLK + CP+C V+
Sbjct: 160 KCNHAFHLPCIDTWLKSHSNCPLCRAFVT 188
>AT1G14200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:4854532-4855071 REVERSE
Length = 179
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 45 IASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCP 104
+ ++P V G + SC IC ++ G+ + CKH +HS+C+ +WL + CP
Sbjct: 90 VENMPRVVI--GEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCP 147
Query: 105 VCSKEV 110
+C E+
Sbjct: 148 MCRYEM 153
>AT1G12760.1 | Symbols: | protein binding / ubiquitin-protein
ligase/ zinc ion binding | chr1:4348728-4350512 FORWARD
Length = 408
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
C IC Y+DG L L C H +H C++ WL IN CP+C + S
Sbjct: 353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKS 400
>AT2G03000.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:875233-877207 FORWARD
Length = 535
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
CVIC ++ + T L CKH YH EC+ WLKI+ CP C ++S
Sbjct: 481 CVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLS 526
>AT5G45290.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:18350011-18352092 REVERSE
Length = 546
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 43 DTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLK--IN 100
D + LP + S++ S C IC ++Y++ +++ L C H +H C++ WLK +
Sbjct: 469 DVVDLLPIKLYTKSQSEDPSQ--CYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHS 526
Query: 101 KVCPVCSKEV 110
+VCP+C ++
Sbjct: 527 RVCPLCRGDI 536
>AT1G12760.2 | Symbols: | protein binding / ubiquitin-protein
ligase/ zinc ion binding | chr1:4348941-4350512 FORWARD
Length = 337
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
C IC Y+DG L L C H +H C++ WL IN CP+C + S
Sbjct: 282 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKS 329
>AT4G00305.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:131550-131930 FORWARD
Length = 126
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 22 SYEELLALGEVVGTESRGLSA-DTIAS---LPSVNFKAGSSQNGSNDSCVICRLDYDDGE 77
S L + + G+ S G + D I LP+ F+ SS+ +SC IC+ ++D G+
Sbjct: 23 SVRSFLDIRRLFGSASSGSTIIDKIPMDDMLPATKFEDISSRVNPPESCRICQDEFDGGD 82
Query: 78 TLTVL-SCKHSYHSECINDWLKINKV-CPVCSKEV 110
+ L +C H YH CI+ W++ +K+ CP+C +
Sbjct: 83 EVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCRTPI 117
>AT1G76410.1 | Symbols: ATL8 | ATL8; protein binding / zinc ion
binding | chr1:28668915-28669472 FORWARD
Length = 185
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 33 VGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSE 91
V ++GL + SLP + + S C IC ++ G+ L VL C H +H
Sbjct: 71 VAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVS 130
Query: 92 CINDWLKINKVCPVCSK 108
CI+ WL + CP C +
Sbjct: 131 CIDTWLGSHSSCPSCRQ 147
>AT1G68180.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:25554816-25555562 FORWARD
Length = 248
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
C IC+ +++ GE L C H YHS CI WL I+ CP+C EV+
Sbjct: 138 CAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEVN 183
>AT4G14220.1 | Symbols: RHF1A | RHF1A (RING-H2 GROUP F1A); protein
binding / ubiquitin-protein ligase/ zinc ion binding |
chr4:8196012-8198240 FORWARD
Length = 371
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 60 NGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
N ++D+C IC + + TV SCKH YH +CI +W + +K CP+C
Sbjct: 40 NNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPIC 86
>AT5G56340.1 | Symbols: ATCRT1 | zinc finger (C3HC4-type RING
finger) family protein | chr5:22818254-22819444 FORWARD
Length = 396
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 65 SCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
C +C D++ G + CKH +H CI WL+++ CPVC E+ SS
Sbjct: 258 QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSS 306
>AT3G60080.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:22187635-22188555 FORWARD
Length = 306
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 45 IASLPSVNFKAG---SSQNGSNDS---CVICRLDYDDGETLTVLSCKHSYHSECINDWLK 98
I S+P++ + S+ + DS C +C+ D+ GE+ L C H YHS+CI WL
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLS 201
Query: 99 INKVCPVCSKEVSSS 113
+ CP+C E+ ++
Sbjct: 202 DHNSCPLCRFELPTT 216
>AT2G35000.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:14751809-14752945 REVERSE
Length = 378
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 37 SRGLSADTIASLPSVNF---KAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSEC 92
+RGL A+ I + P+ + KA G + C +C +++D ETL ++ C H +H++C
Sbjct: 104 ARGLDAEAIETFPTFLYSEVKAVRIGKGGVE-CAVCLCEFEDDETLRLMPPCCHVFHADC 162
Query: 93 INDWLKINKVCPVCSKEV 110
++ WL + CP+C ++
Sbjct: 163 VDVWLSEHSTCPLCRADL 180
>AT2G18670.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:8093469-8094452 FORWARD
Length = 181
Score = 49.3 bits (116), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIND 95
S GLS+ + LP F S+ CV+C + G+ L C H +H +C++
Sbjct: 81 SDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDT 140
Query: 96 WLKINKVCPVCSKEV 110
WL CP+C V
Sbjct: 141 WLLKASTCPICRARV 155
>AT5G20910.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:7092663-7094310 REVERSE
Length = 310
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 41 SADTIASLPSVNF-KAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKI 99
S + + LP + F + + G+ C IC+ + G+ + L CKH++H C+ WL
Sbjct: 204 SKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDE 263
Query: 100 NKVCPVCSKEVSS 112
+ CP+C E+ +
Sbjct: 264 HNSCPICRHELPT 276
>AT4G26400.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 356
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC D+D G + CKH +H CI WL+++ CPVC E+
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13344953-13346023 REVERSE
Length = 356
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC D+D G + CKH +H CI WL+++ CPVC E+
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT3G11110.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3479979-3480455 FORWARD
Length = 158
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIN 94
S GL I SLP V + ++ C IC +++GE + VL C H YH EC++
Sbjct: 77 RSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVD 136
Query: 95 DWLKINKVCPVCSKEV 110
WLK CP+C +
Sbjct: 137 RWLKTESSCPLCRVSI 152
>AT2G39720.1 | Symbols: RHC2A | RHC2A; protein binding / zinc ion
binding | chr2:16567506-16568711 REVERSE
Length = 401
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 41/94 (43%)
Query: 19 DELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGET 78
D++S EL + E S I +LP + + S C +C+ ++ +
Sbjct: 154 DQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSS 213
Query: 79 LTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
+ C H YH +CI WL I CPVC E+ +
Sbjct: 214 AREMPCNHIYHPDCILPWLAIRNSCPVCRHELPA 247
>AT5G07040.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2190344-2190823 FORWARD
Length = 159
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 19 DELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQN---GSNDSCVICRLDYDD 75
DE + + +L L GL I S P + G S+ +N C IC DY+
Sbjct: 46 DEATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVL--GDSRRLPRPNNGPCSICLCDYEA 103
Query: 76 GETLTVLS-CKHSYHSECINDWLKINKVCPVCSKEVSSS 113
E + + C H +H++C+++WL+ + CP+C + S
Sbjct: 104 REPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPS 142
>AT2G44330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:18310621-18311163 FORWARD
Length = 180
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 43 DTIASLPSVNFKAGSSQNGSND----SCVICRLDYDDGETLTVLSCKHSYHSECINDWLK 98
D + SLP++ + + S+D C ICR D+ GE+ L C H YH++CI WL
Sbjct: 69 DPMESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLT 128
Query: 99 INKVCPVCSKEV 110
+ CP+C E+
Sbjct: 129 SHNSCPLCRVEL 140
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
Length = 407
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 41 SADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKIN 100
S I SLP V GS +C +C ++ + CKH +H +CI WL I
Sbjct: 176 SKSAIESLPRVEIS--DCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIR 233
Query: 101 KVCPVCSKEVSS 112
CPVC E+ S
Sbjct: 234 NSCPVCRFELPS 245
>AT3G61550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:22776444-22777082 FORWARD
Length = 212
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 39 GLSADTIASLPSVNFKAGSSQ----------NGSNDSCVICRLDYDDGETLTVLS-CKHS 87
GL I S P +F + G +C IC +Y + E L ++ CKH
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHY 158
Query: 88 YHSECINDWLKINKVCPVC 106
+H C++ WLK+N CPVC
Sbjct: 159 FHVYCLDAWLKLNGSCPVC 177
>AT5G22000.2 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protein
binding / zinc ion binding | chr5:7277436-7279553
FORWARD
Length = 375
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 53 FKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
F G Q+ +D+C IC + + + T+ SCKH YH +CI +W + + CP+C + +S
Sbjct: 20 FVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>AT5G22000.3 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protein
binding / zinc ion binding | chr5:7277436-7279553
FORWARD
Length = 375
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 53 FKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
F G Q+ +D+C IC + + + T+ SCKH YH +CI +W + + CP+C + +S
Sbjct: 20 FVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>AT5G22000.1 | Symbols: RHF2A | RHF2A (RING-H2 GROUP F2A); protein
binding / zinc ion binding | chr5:7277436-7279553
FORWARD
Length = 375
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 53 FKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVS 111
F G Q+ +D+C IC + + + T+ SCKH YH +CI +W + + CP+C + +S
Sbjct: 20 FVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSIS 78
>AT5G41430.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:16586119-16586604 REVERSE
Length = 161
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 46 ASLPSVNFKAGSSQNGSNDSCVICRLDYDDG-ETLTVLSCKHSYHSECINDWLKINKVCP 104
AS+ + FK + C IC + +DG E + + C+H +H CI+ WLK N+ CP
Sbjct: 97 ASIEEMEFKDIEKEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCP 156
Query: 105 VC 106
C
Sbjct: 157 NC 158
>AT2G34000.1 | Symbols: | zinc finger protein-related |
chr2:14365177-14365632 FORWARD
Length = 151
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 38 RGLSADTIASLPSVNFKAGSSQNGSNDS---CVICRLDYDDGETLTVL-SCKHSYHSECI 93
+GLSA IA+ P+ ++K ++ SN+ C +C + VL +C H + ECI
Sbjct: 60 QGLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECI 119
Query: 94 NDWLKINKVCPVCSK 108
WL+ + CPVC +
Sbjct: 120 GKWLESHATCPVCRR 134
>AT3G10910.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3413068-3413613 REVERSE
Length = 181
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
GL + +P + +G + + C+IC D++DGE + VL C H +H CI+ WL
Sbjct: 88 GLKKQALKQIPVGLYGSGIIDMKATE-CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWL 146
Query: 98 KINKVCPVCSKEV 110
CP C + +
Sbjct: 147 LSRSSCPTCRQSL 159
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
Length = 395
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 41 SADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKIN 100
S I SLP V ++ +N C +C ++ G + CKH +H +CI WL I
Sbjct: 192 SKSAIESLPRVEISDCHTKAEAN--CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249
Query: 101 KVCPVCSKEVSS 112
CPVC E+ S
Sbjct: 250 NSCPVCRFELPS 261
>AT3G56580.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 320
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 34 GTESRG---LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHS 90
GT RG +I +LP++ ++ S+ C +C+ +++ + C H YHS
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQKHLKS-SDSHCPVCKDEFELKSEAKQMPCHHIYHS 210
Query: 91 ECINDWLKINKVCPVCSKEV 110
+CI WL + CPVC KE+
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 320
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 34 GTESRG---LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHS 90
GT RG +I +LP++ ++ S+ C +C+ +++ + C H YHS
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQKHLKS-SDSHCPVCKDEFELKSEAKQMPCHHIYHS 210
Query: 91 ECINDWLKINKVCPVCSKEV 110
+CI WL + CPVC KE+
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20962563-20963525 FORWARD
Length = 320
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 34 GTESRG---LSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHS 90
GT RG +I +LP++ ++ S+ C +C+ +++ + C H YHS
Sbjct: 152 GTHHRGPPPAPKSSIDALPTIKITQKHLKS-SDSHCPVCKDEFELKSEAKQMPCHHIYHS 210
Query: 91 ECINDWLKINKVCPVCSKEV 110
+CI WL + CPVC KE+
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE
Length = 349
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 17 DPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDG 76
+PD S+ L + GL I +LP + + C +C ++ D
Sbjct: 159 NPDLFSFSSP-QLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDT 217
Query: 77 ETLTVLS-CKHSYHSECINDWLKINKVCPVCSKEVSSS 113
+ L +L C H++H CI+ WL N CP+C + +S+S
Sbjct: 218 DKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTS 255
>AT4G10150.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:6328136-6329558 FORWARD
Length = 236
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 33 VGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSE 91
+ T GLS D LP V +K S C +C DY E L + SC H++H E
Sbjct: 80 LSTAELGLSKDIREMLPVVIYKESFIVKDSQ--CSVCLGDYQAEEKLQQMPSCGHTFHME 137
Query: 92 CINDWLKINKVCPVC 106
CI+ WL + CP+C
Sbjct: 138 CIDLWLTSHTTCPLC 152
>AT4G15975.1 | Symbols: | protein binding / zinc ion binding |
chr4:9052313-9053020 FORWARD
Length = 235
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
GL+ I SLP F A ++ C +C ++ D E+ V+ +CKH++H +CI+ W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFAME--CSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWF 108
Query: 98 KINKVCPVC 106
+ CP+C
Sbjct: 109 HSHSSCPLC 117
>AT2G15580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:6797687-6798815 FORWARD
Length = 196
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEV 110
C IC + GETL L C H +HS C+ WL N CP C ++
Sbjct: 150 CAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT4G30370.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:14858743-14859273 REVERSE
Length = 176
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 37 SRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIND 95
S GLS + LP + SS+ G +D CV+C + G+ L C H +H +C++
Sbjct: 87 SDGLSPRCVKRLPQFKYCEPSSEYGGDD-CVVCIDGFRQGQWCRKLPRCGHVFHRKCVDL 145
Query: 96 WLKINKVCPVCSKEV 110
WL CP+C V
Sbjct: 146 WLIKVSTCPICRDRV 160
>AT1G33480.1 | Symbols: | protein binding / zinc ion binding |
chr1:12148758-12150121 REVERSE
Length = 261
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 30 GEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSY 88
G + T GLS + LP V FK + S C +C DY + L + CKH++
Sbjct: 66 GNSLSTIELGLSKELREMLPIVVFKESFTVMDSQ--CSVCLGDYQPNDKLQQIPVCKHTF 123
Query: 89 HSECINDWLKINKVCPVC 106
H +CI+ WL + CP+C
Sbjct: 124 HMDCIDLWLTSHTTCPLC 141
>AT1G53820.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:20091491-20092423 FORWARD
Length = 310
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
GL + + S+ V FK ++G C +C D DG+ VL C H +H +CI+ W
Sbjct: 95 GLDSKILQSIHVVVFKCTDFKDGL--ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWF 152
Query: 98 KINKVCPVCSKEVSS 112
+ + CP+C V S
Sbjct: 153 QSHSTCPLCRNTVGS 167
>AT5G10380.1 | Symbols: RING1 | RING1; protein binding /
ubiquitin-protein ligase/ zinc ion binding |
chr5:3267819-3268724 FORWARD
Length = 301
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWL 97
GL I S+ V FK G + C +C ++++ E+L +L C H++H CI+ WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTE-CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
Query: 98 KINKVCPVCSKEV 110
+K CP+C V
Sbjct: 168 LSHKNCPLCRAPV 180
>AT1G22500.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:7949581-7950726 FORWARD
Length = 381
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 35 TESRGLSADTIASLPSVNFKAGSSQNGSNDS--CVICRLDYDDGETLTVL-SCKHSYHSE 91
T GL A I + P+ + + ++ C +C +++D ETL ++ C H +H
Sbjct: 85 TTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPG 144
Query: 92 CINDWLKINKVCPVC 106
CI+ WL+ CP+C
Sbjct: 145 CIDAWLRSQTTCPLC 159
>AT5G01880.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:339017-339496 FORWARD
Length = 159
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 39 GLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECINDWL 97
GL + P + +G + + + C IC ++ DGE + VL C HS+H CI+ WL
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATE-CAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 98 KINKVCPVC 106
+ CP C
Sbjct: 138 VSHSSCPNC 146
>AT2G44578.1 | Symbols: | protein binding / zinc ion binding |
chr2:18400864-18401301 REVERSE
Length = 145
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 54 KAGSSQNGSNDSCVICRLDYDDGETLT-VLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
K + + S+ C IC D +GE + + +C H +H +CI+ WL CP+C E+
Sbjct: 58 KTAAEEKHSSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPP 117
>AT4G00070.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Zinc finger, RING/FYVE/PHD-type
(InterPro:IPR013083); BEST Arabidopsis thaliana protein
match is: zinc finger protein-related
(TAIR:AT1G36950.1); Has 412 Blast hits to 412 proteins
in 58 species: Archae - 0; Bacteria - 0; Metazoa - 32;
Fungi - 25; Plants - 277; Viruses - 0; Other Eukaryotes
- 78 (source: NCBI BLink). | chr4:29672-31426 REVERSE
Length = 179
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 11 DAWEE--VDPDELSYEELLALGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVI 68
D ++E +D D ++YE+LL L +G E+ G+ A I N K Q+ ++ C I
Sbjct: 88 DPYQELRMDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLR-NTKPSEFQSLADKICCI 146
Query: 69 CRLDYDDGETLTVLSCKHSYHSECINDWLKINK 101
C+ + + L+C H++H C+ W+ K
Sbjct: 147 CQDGFQKRAGVGKLNCGHNFHVNCVKPWILTKK 179
>AT4G09110.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:5812488-5813396 FORWARD
Length = 302
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 38 RGLSADTIASLPSVNFK--AGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECIN 94
RGL + + S P + G C IC ++ D ETL + C H++H+ CI+
Sbjct: 93 RGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCID 152
Query: 95 DWLKINKVCPVCSKEVS 111
WL CP C +S
Sbjct: 153 VWLSSQSTCPACRANLS 169
>AT1G63170.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:23425574-23427073 FORWARD
Length = 381
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSSS 113
C IC Y+D L L C H +H C++ WL IN CP+C + S
Sbjct: 325 CCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKS 372
>AT4G17905.1 | Symbols: ATL4H | ATL4H; protein binding / zinc ion
binding | chr4:9948853-9949785 REVERSE
Length = 310
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 53 FKAGSSQNG---SNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWLKINKVCPVCSK 108
FK QNG + C IC ++++ E+L +L C H++H CI+ WLK + CP+C
Sbjct: 139 FKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRA 198
Query: 109 EV 110
++
Sbjct: 199 KI 200
>AT5G05280.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:1565509-1566039 REVERSE
Length = 176
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 34 GTESRGLSADTIASL-PSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSE 91
G + R L + S P + KA C+IC D+ +GET+ VL C H +H +
Sbjct: 88 GIKKRALKVIPVDSYSPELKMKA--------TECLICLGDFVEGETVRVLPKCNHGFHVK 139
Query: 92 CINDWLKINKVCPVCSKEV 110
CI+ WL + CP C + +
Sbjct: 140 CIDTWLLSHSSCPTCRQSL 158
>AT5G57750.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23399668-23400300 FORWARD
Length = 210
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 45 IASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECINDWLKINKVC 103
I +LP +++K C +C ++ + L +L C H++H ECI+ WL N C
Sbjct: 101 IDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTC 160
Query: 104 PVC 106
P+C
Sbjct: 161 PLC 163
>AT4G40070.1 | Symbols: | protein binding / zinc ion binding |
chr4:18576533-18577504 FORWARD
Length = 323
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 39 GLSADTIASLPSVNFKA-GSSQNGSND-SCVICRLDYDDGETLTVLS-CKHSYHSECIND 95
GL + S P + + S+ GS D C IC + +D ET+ +L C H +H +CI+
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154
Query: 96 WLKINKVCPVCSKEVSS 112
WL + CPVC +++
Sbjct: 155 WLYSHATCPVCRSNLTA 171
>AT3G60966.1 | Symbols: | protein binding / zinc ion binding |
chr3:22552718-22553137 FORWARD
Length = 139
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 53 FKAGSSQNGSNDSCVICRLDYDDGETLTVLS-CKHSYHSECINDWLKINKVCPVCSKEV 110
++A + + S C +C + ++GE + L+ C+H +H++CI+ WL CP+C ++
Sbjct: 49 WRAAENDDSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>AT1G18770.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6473370-6474048 REVERSE
Length = 106
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 30 GEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYH 89
++ G S + SL +K +S G + C+IC ++ +G + L C H +
Sbjct: 25 AKIDGYNPTPASKLVVKSLARKIYKMTTSSTG--EMCIICLEEFSEGRRVVTLPCGHDFD 82
Query: 90 SECINDWLKINKVCPVC 106
EC+ W + N CP+C
Sbjct: 83 DECVLKWFETNHSCPLC 99
>AT1G55530.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:20729472-20730527 REVERSE
Length = 351
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 66 CVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKEVSS 112
C +C D++ G ++ C H +HS+C+ WL+++ CPVC ++ +
Sbjct: 223 CSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPA 269
>AT2G37580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:15764745-15765452 FORWARD
Length = 235
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 66 CVICRLDYDDGETLTVLS-CKHSYHSECINDWLKINKVCPVCSKEVS 111
C +C + + D + L LS CKH++H CI WLK + CP+C +VS
Sbjct: 142 CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVS 188
>AT2G44581.1 | Symbols: | protein binding / zinc ion binding |
chr2:18397996-18398433 REVERSE
Length = 145
Score = 45.4 bits (106), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 54 KAGSSQNGSNDSCVICRLDYDDGETLT-VLSCKHSYHSECINDWLKINKVCPVCSKEV 110
K + + S+ C IC + +GE + + +C H +H +CI+ WL+ +CP+C E+
Sbjct: 58 KTTAEEKHSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>AT5G58580.1 | Symbols: ATL63 | ATL63 (ARABIDOPSIS TÓXICOS EN
LEVADURA); protein binding / zinc ion binding |
chr5:23676906-23677832 REVERSE
Length = 308
Score = 45.4 bits (106), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIN 94
+ +GL + I+S+P ++ + + CVIC ++ G+ L +C H +H ECI+
Sbjct: 108 DDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECID 167
Query: 95 DWLKINKVCPVCSKEV 110
WL + CP+C V
Sbjct: 168 MWLSSHSTCPLCRSPV 183
>AT3G19140.1 | Symbols: | protein binding / zinc ion binding |
chr3:6614910-6615335 REVERSE
Length = 141
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 36 ESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHSYHSECIN 94
++ G++ + S+P V+F A + ++ N CV+C + D + VL SC H +H + +
Sbjct: 51 KATGINPSVLLSIPVVSFNANAFKD--NIECVVCLSKFIDEDKARVLPSCNHCFHFDFTD 108
Query: 95 DWLKINKVCPVCSKEV 110
WL + CP C K V
Sbjct: 109 TWLHSDYTCPNCRKNV 124
>AT1G18760.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6471150-6471824 REVERSE
Length = 224
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 54 KAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVC 106
K S + C IC +++DG + L C H + EC+ W + N CP+C
Sbjct: 163 KIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETNHDCPLC 215
>AT3G13228.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:4267075-4268052 FORWARD
Length = 325
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 50 SVNFKAGSSQNGSNDSCVICRLDYDDGETLTVLSCKHSYHSECINDWLKINKVCPVCSKE 109
S+ K N + + C IC +++ G L L C H + EC W + N CP+C E
Sbjct: 259 SLTRKIYDKINYTGERCTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYE 318
Query: 110 V 110
+
Sbjct: 319 L 319
>AT2G18650.1 | Symbols: MEE16 | MEE16 (maternal effect embryo arrest
16); protein binding / zinc ion binding |
chr2:8086860-8088131 REVERSE
Length = 423
Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 29 LGEVVGTESRGLSADTIASLPSVNFKAGSSQNGSNDSCVICRLDYDDGETLTVL-SCKHS 87
L ++ G+ I +LP ++K+ S C +C +++ + L +L C H+
Sbjct: 89 LQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHA 148
Query: 88 YHSECINDWLKINKVCPVC 106
+H ECI+ WL + CP+C
Sbjct: 149 FHVECIDTWLLSHSTCPLC 167