Jatropha Genome Database

JcCB0009521.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0009521.30 + phase: 2 /partial
         (383 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38380.1 | Symbols:  | antiporter/ drug transporter | chr4:17...   201   6e-52
AT1G51340.1 | Symbols:  | MATE efflux family protein | chr1:1903...   195   5e-50
AT1G51340.2 | Symbols:  | MATE efflux family protein | chr1:1903...   194   7e-50
AT3G08040.2 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFEC...   177   7e-45
AT3G08040.1 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFEC...   177   7e-45
AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...   119   4e-27

>AT4G38380.1 | Symbols:  | antiporter/ drug transporter |
           chr4:17971855-17974787 REVERSE
          Length = 560

 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/397 (34%), Positives = 191/397 (48%), Gaps = 93/397 (23%)

Query: 34  TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
           TA+IG +G VEL + GVS+AIFN +SK+   PL+SV TS VA ED   I + ++      
Sbjct: 131 TAYIGRLGSVELGSAGVSMAIFNTISKLFNIPLLSVATSFVA-EDIAKIAAQDLAS---- 185

Query: 94  EDGVAVNKEMEELLPKAESTHKPSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFF 153
           ED                      S S + ++   ERK + S S+ALV+   +G+ +A  
Sbjct: 186 ED----------------------SQSDIPSQGLPERKQLSSVSTALVLAIGIGIFEALA 223

Query: 154 LIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKT---- 209
           L   + P L  MG+ S S M IPA+Q+L               +QG+FRG KDTKT    
Sbjct: 224 LSLASGPFLRLMGIQSMSEMFIPARQFLVLRALGAPAYVVSLALQGIFRGFKDTKTPVYC 283

Query: 210 ------------PLFATRF---------------------MLLL---------------- 220
                       PLF  +F                     ML+L                
Sbjct: 284 LGIGNFLAVFLFPLFIYKFRMGVAGAAISSVISQYTVAILMLILLNKRVILLPPKIGSLK 343

Query: 221 -------------RVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVA 267
                        R ++    +T+A S+AAR G  +MAA Q+C+Q+WLA SLL D LA +
Sbjct: 344 FGDYLKSGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASS 403

Query: 268 GQAILATAFANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRII 327
           GQA++A++ + +D++  K  T+ VL+                    +GLF++D  VLRI+
Sbjct: 404 GQALIASSASKRDFEGVKEVTTFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIV 463

Query: 328 SIGIPFVTATQPINVLAFVFDGVNYGASDFAYSAYSM 364
             G+ FV ATQPI  LAF+FDG++YG SDF Y+A SM
Sbjct: 464 RKGVLFVAATQPITALAFIFDGLHYGMSDFPYAACSM 500


>AT1G51340.1 | Symbols:  | MATE efflux family protein |
           chr1:19032034-19034681 FORWARD
          Length = 509

 Score =  195 bits (495), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/149 (66%), Positives = 113/149 (75%)

Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
           F+LL+RVIA T CVTL+ASLAAR GSTSMAAFQVCLQ+WLATSLLADG AVAGQAILA+A
Sbjct: 307 FLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASA 366

Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
           FA KDY +A AT SRVLQ                  F + +FT+D  VL +ISIG+PFV 
Sbjct: 367 FAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVA 426

Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
            TQPIN LAFVFDGVN+GASDF Y+A S+
Sbjct: 427 GTQPINALAFVFDGVNFGASDFGYAAASL 455



 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 131/223 (58%), Gaps = 11/223 (4%)

Query: 1   NIFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSK 60
           ++ + DELG                        TAFIG IGPVELAAVGVSIA+FNQVS+
Sbjct: 19  SVLKFDELGLEIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSR 78

Query: 61  IAIFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPKAESTHK----- 115
           IAIFPLVS+TTS VA+ED        V + ++  + + +N   EE +      HK     
Sbjct: 79  IAIFPLVSITTSFVAEEDACSSQQDTVRDHKECIE-IGINNPTEETIELIPEKHKDSLSD 137

Query: 116 ----PSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDS 171
                SS+ S+ +K   ++++IPSASSAL++G VLGL QA FLI  AKP+L++MGV  DS
Sbjct: 138 EFKTSSSIFSI-SKPPAKKRNIPSASSALIIGGVLGLFQAVFLISAAKPLLSFMGVKHDS 196

Query: 172 PMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFAT 214
           PM+ P+Q+YL+               QGVFRG KDT TPLFAT
Sbjct: 197 PMMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFAT 239


>AT1G51340.2 | Symbols:  | MATE efflux family protein |
           chr1:19032021-19034681 FORWARD
          Length = 515

 Score =  194 bits (493), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 99/149 (66%), Positives = 113/149 (75%)

Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
           F+LL+RVIA T CVTL+ASLAAR GSTSMAAFQVCLQ+WLATSLLADG AVAGQAILA+A
Sbjct: 313 FLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASA 372

Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
           FA KDY +A AT SRVLQ                  F + +FT+D  VL +ISIG+PFV 
Sbjct: 373 FAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVA 432

Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
            TQPIN LAFVFDGVN+GASDF Y+A S+
Sbjct: 433 GTQPINALAFVFDGVNFGASDFGYAAASL 461



 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 131/223 (58%), Gaps = 11/223 (4%)

Query: 1   NIFRNDELGXXXXXXXXXXXXXXXXXXXXXXXXTAFIGHIGPVELAAVGVSIAIFNQVSK 60
           ++ + DELG                        TAFIG IGPVELAAVGVSIA+FNQVS+
Sbjct: 25  SVLKFDELGLEIARIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSR 84

Query: 61  IAIFPLVSVTTSLVAKEDTTGILSTEVHETEKLEDGVAVNKEMEELLPKAESTHK----- 115
           IAIFPLVS+TTS VA+ED        V + ++  + + +N   EE +      HK     
Sbjct: 85  IAIFPLVSITTSFVAEEDACSSQQDTVRDHKECIE-IGINNPTEETIELIPEKHKDSLSD 143

Query: 116 ----PSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFFLIFGAKPILNYMGVHSDS 171
                SS+ S+ +K   ++++IPSASSAL++G VLGL QA FLI  AKP+L++MGV  DS
Sbjct: 144 EFKTSSSIFSI-SKPPAKKRNIPSASSALIIGGVLGLFQAVFLISAAKPLLSFMGVKHDS 202

Query: 172 PMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFAT 214
           PM+ P+Q+YL+               QGVFRG KDT TPLFAT
Sbjct: 203 PMMRPSQRYLSLRSLGAPAVLLSLAAQGVFRGFKDTTTPLFAT 245


>AT3G08040.2 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE
           DEFECTIVE 3); antiporter/ transporter |
           chr3:2566593-2569397 REVERSE
          Length = 526

 Score =  177 bits (450), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 108/149 (72%)

Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
            +LL R IA T C TLAA++AAR G+T MAAFQ+CLQ+WL +SLL DGLAVAGQAILA +
Sbjct: 317 LLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACS 376

Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
           FA KDY+K  A  SRVLQ                  F +G+F++D  V+ +++IGIPF+ 
Sbjct: 377 FAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPFIA 436

Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
           ATQPIN LAFV DGVN+GASDFAY+AYSM
Sbjct: 437 ATQPINSLAFVLDGVNFGASDFAYTAYSM 465



 Score =  162 bits (409), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 123/191 (64%), Gaps = 10/191 (5%)

Query: 34  TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
           TAF+G +G V+LAAVGVSIAIFNQ S+I IFPLVS+TTS VA+EDT   +  E ++   +
Sbjct: 59  TAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKANLV 118

Query: 94  E-DGVAVNKEMEELL--PKAESTHKPSSVSSVCTKSD-------YERKHIPSASSALVVG 143
             + + V   +E+ +  P +  T++P    +  TKS+        E++ I +AS+A+++G
Sbjct: 119 HAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAMILG 178

Query: 144 CVLGLLQAFFLIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRG 203
            +LGL+QA FLIF +K +L  MGV  +SPML PA +YL+              MQG+FRG
Sbjct: 179 LILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGIFRG 238

Query: 204 IKDTKTPLFAT 214
            KDTKTPLFAT
Sbjct: 239 FKDTKTPLFAT 249


>AT3G08040.1 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE
           DEFECTIVE 3); antiporter/ transporter |
           chr3:2566593-2569397 REVERSE
          Length = 526

 Score =  177 bits (450), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 108/149 (72%)

Query: 216 FMLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATA 275
            +LL R IA T C TLAA++AAR G+T MAAFQ+CLQ+WL +SLL DGLAVAGQAILA +
Sbjct: 317 LLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACS 376

Query: 276 FANKDYDKAKATTSRVLQFXXXXXXXXXXXXXXXXPFASGLFTEDINVLRIISIGIPFVT 335
           FA KDY+K  A  SRVLQ                  F +G+F++D  V+ +++IGIPF+ 
Sbjct: 377 FAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPFIA 436

Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
           ATQPIN LAFV DGVN+GASDFAY+AYSM
Sbjct: 437 ATQPINSLAFVLDGVNFGASDFAYTAYSM 465



 Score =  162 bits (409), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 123/191 (64%), Gaps = 10/191 (5%)

Query: 34  TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
           TAF+G +G V+LAAVGVSIAIFNQ S+I IFPLVS+TTS VA+EDT   +  E ++   +
Sbjct: 59  TAFVGRLGAVQLAAVGVSIAIFNQASRITIFPLVSLTTSFVAEEDTMEKMKEEANKANLV 118

Query: 94  E-DGVAVNKEMEELL--PKAESTHKPSSVSSVCTKSD-------YERKHIPSASSALVVG 143
             + + V   +E+ +  P +  T++P    +  TKS+        E++ I +AS+A+++G
Sbjct: 119 HAETILVQDSLEKGISSPTSNDTNQPQQPPAPDTKSNSGNKSNKKEKRTIRTASTAMILG 178

Query: 144 CVLGLLQAFFLIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRG 203
            +LGL+QA FLIF +K +L  MGV  +SPML PA +YL+              MQG+FRG
Sbjct: 179 LILGLVQAIFLIFSSKLLLGVMGVKPNSPMLSPAHKYLSIRALGAPALLLSLAMQGIFRG 238

Query: 204 IKDTKTPLFAT 214
            KDTKTPLFAT
Sbjct: 239 FKDTKTPLFAT 249


>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD
          Length = 521

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 2/149 (1%)

Query: 217 MLLLRVIAATCCVTLAASLAARHGSTSMAAFQVCLQIWLATSLLADGLAVAGQAILATAF 276
           +L+ R +A     TLA SLAA++G T MA  Q+ L+IWLA SLL D LA+A Q++LAT +
Sbjct: 314 LLIGRTVALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTY 373

Query: 277 ANKDYDKAKATTSRVLQFXXXXXXXXXXXX-XXXXPFASGLFTEDINVLRIISIGIPFVT 335
           +  +Y +A+     VLQ                  PF+S LFT D  VL+I   G  FV 
Sbjct: 374 SQGEYKQAREVLFGVLQVGLATGTGLAAVLFITFEPFSS-LFTTDSEVLKIALSGTLFVA 432

Query: 336 ATQPINVLAFVFDGVNYGASDFAYSAYSM 364
            +QP+N LAFV DG+ YG SDF ++AYSM
Sbjct: 433 GSQPVNALAFVLDGLYYGVSDFGFAAYSM 461



 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 37/180 (20%)

Query: 34  TAFIGHIGPVELAAVGVSIAIFNQVSKIAIFPLVSVTTSLVAKEDTTGILSTEVHETEKL 93
           TAF+GHIG  ELAAVGVS+++FN VSK+   PL++VTTS VA+E                
Sbjct: 102 TAFVGHIGSAELAAVGVSVSVFNLVSKLFNVPLLNVTTSFVAEEQA-------------- 147

Query: 94  EDGVAVNKEMEELLPKAESTHKPSSVSSVCTKSDYERKHIPSASSALVVGCVLGLLQAFF 153
              +A   + + +                    +  +K +PS S++LV+   +G+ +A  
Sbjct: 148 ---IAAKDDNDSI--------------------ETSKKVLPSVSTSLVLAAGVGIAEAIA 184

Query: 154 LIFGAKPILNYMGVHSDSPMLIPAQQYLTXXXXXXXXXXXXXXMQGVFRGIKDTKTPLFA 213
           L  G+  +++ M +  DSPM IPA+Q+L                QG FRG KDT TPL+A
Sbjct: 185 LSLGSDFLMDVMAIPFDSPMRIPAEQFLRLRAYGAPPIVVALAAQGAFRGFKDTTTPLYA 244