Jatropha Genome Database
- JcCB0009521.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0009521.20 + phase: 0 /pseudo
(636 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 570 e-163
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 321 7e-88
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 311 1e-84
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 300 2e-81
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 5e-77
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 6e-77
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 4e-76
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 5e-76
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 278 5e-75
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 5e-74
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 1e-73
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 4e-73
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 5e-73
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 9e-73
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 4e-72
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 268 1e-71
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 1e-71
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 268 1e-71
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 267 2e-71
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 4e-71
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 5e-71
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 263 2e-70
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 263 3e-70
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 4e-70
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 8e-70
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 261 1e-69
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 260 1e-69
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 3e-69
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 259 4e-69
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 1e-68
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 1e-68
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 1e-68
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 257 1e-68
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 6e-68
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 8e-68
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 8e-68
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 5e-67
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 8e-67
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 3e-66
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 5e-66
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 6e-66
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 247 1e-65
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 2e-65
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 4e-65
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 5e-65
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 9e-65
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 242 4e-64
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 5e-64
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 5e-64
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 8e-64
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 8e-64
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 1e-63
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 7e-63
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 7e-63
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 1e-62
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 4e-62
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 4e-62
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 235 5e-62
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 235 7e-62
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 8e-62
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 7e-61
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 8e-61
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 1e-60
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 3e-60
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 2e-59
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 4e-59
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 5e-59
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 9e-59
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 2e-58
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 4e-58
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 1e-57
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 2e-57
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 220 2e-57
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 3e-57
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 219 4e-57
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 1e-56
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 1e-56
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 217 2e-56
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 217 2e-56
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 8e-56
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 6e-55
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 8e-55
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 9e-55
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 210 2e-54
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 5e-54
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 209 6e-54
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 7e-54
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 8e-54
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 4e-53
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 4e-53
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 7e-53
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 8e-53
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 8e-53
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 204 1e-52
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 2e-52
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 2e-52
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 200 2e-51
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 5e-51
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 199 6e-51
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 9e-51
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 9e-51
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 5e-50
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 193 3e-49
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 1e-48
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 3e-48
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 6e-48
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 6e-48
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 7e-48
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 3e-47
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 184 2e-46
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 3e-45
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 5e-45
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 6e-45
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 178 9e-45
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 177 3e-44
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 175 8e-44
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 2e-43
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 5e-43
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 7e-42
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 9e-41
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 164 2e-40
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 3e-40
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 4e-40
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 9e-40
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 160 2e-39
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 1e-37
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 1e-37
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 3e-35
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 4e-33
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 102 8e-22
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 77 3e-14
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 77 3e-14
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 75 9e-14
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 75 1e-13
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 75 1e-13
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 72 1e-12
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 69 1e-11
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 69 1e-11
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 69 1e-11
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 68 1e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 67 5e-11
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 65 1e-10
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 64 3e-10
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 64 4e-10
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 63 6e-10
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 62 8e-10
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 61 2e-09
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 60 3e-09
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 60 4e-09
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 58 2e-08
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 58 2e-08
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 57 2e-08
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 4e-08
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 57 4e-08
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 56 6e-08
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 55 1e-07
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 54 3e-07
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 52 1e-06
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 51 2e-06
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 51 3e-06
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 3e-06
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 570 bits (1470), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/475 (58%), Positives = 359/475 (75%)
Query: 63 YRHICEXXXXXXXXXXXXKGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFE 122
Y IC+ KG Q+H +++KS L IPLV+++LINFYSK+QLP S +AFE
Sbjct: 15 YNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE 74
Query: 123 EAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI 182
++ +KS+TTWSS+IS AQNELP +++E+ ++M+ N+RPDDH+ PSA K+CAIL RCDI
Sbjct: 75 DSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI 134
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL 242
G+S+H +KTG+D DVFVGSS VDMY KCGEI ARK+FDEMP+RNVV+WSGM+ YA
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 243 LGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
+GE+E AL LFKEAL E+L+VND++FSSVI VC NSTLLELGRQIHGL +K+S+D
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
KCGV E A +VFNE P++NLG+WN+ML A AQH+HT++V +LF RMK GM
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
+PNFITFL +L ACSH GL+D+G+ YF MK+ IEP +HYA++VD+LGRAG+LQEAL+
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 423 IIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXX 482
+I MPI+PTESVWGA LT C +H + ELAAFAAD++FELG VSSGM++ LSN
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 483 XXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIG 537
K+LRDRG KKETGLSW+EE N+VHTFAAG+R HEK+K ++ +G
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELG 489
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 255/456 (55%), Gaps = 3/456 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +HAHI++S + ++ + L+N Y+K + + FE+ ++ TW+++IS +
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q++ P A+ +F QM+ P++ S IKA A R G +H F VK GFD +V
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VGS+ +D+Y + G + +A+ VFD + RN VSW+ +I +A E AL+LF+ L +
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ F+++S+ C ++ LE G+ +H +K+ K G I A
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
++F+ R++ WNS+L A AQH +E F+ M+ VG+RPN I+FL +L ACSH G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
L+D+G Y+ LMK GI P A HY T+VDLLGRAG L AL I+ MPIEPT ++W A L
Sbjct: 378 LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR+H + EL A+AA+ +FEL G +V+L N K +++ GVKK
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 501 ETGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
E SW+E N +H F A D H E+ R E+
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 1/304 (0%)
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
I D + + +K C + G+ +HA ++++ F D+ +G++ ++MY KCG ++ AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 220 KVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNST 279
KVF++MP+R+ V+W+ +I Y+ +AL F + L S N+FT SSVI+
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 280 LLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLI 339
G Q+HG C+K +D + G+++ A VF+ RN WN+++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 340 ACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEP 399
A+ + TE+ +LF M G RP+ ++ L ACS G +++G+ M G +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 400 GAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
A T++D+ ++G + +A I + S W + LT HG + A + + +
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 460 FELG 463
+G
Sbjct: 355 RRVG 358
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 260/459 (56%), Gaps = 5/459 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+ + H II+ L+ + + LIN YSK + Q F+ E+S +W+++I
Sbjct: 71 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 130
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI--GKSIHAFVVKTGFDVD 198
+N + S A++ F +M + + + S + AC + CD K +H VKT D++
Sbjct: 131 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV--NCDALECKKLHCLSVKTCIDLN 188
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
++VG++ +D+Y KCG IK+A +VF+ M +++ V+WS M+ Y E AL L++ A
Sbjct: 189 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 248
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
L N FT SSVI C N L G+Q+H + K+ + KCG +
Sbjct: 249 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 308
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+ +F+E +NL +WN+++ A+HA +EV LF++M+ GM PN +TF LL C H
Sbjct: 309 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 368
Query: 379 GGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
GL+++G+++F LM+ YG+ P HY+ MVD+LGRAG L EA ++IK++P +PT S+WG
Sbjct: 369 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 428
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
+ L CR++ + ELA AA+++FEL ++G +VLLSN K+LRD
Sbjct: 429 SLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCD 488
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
VKK G SWI+ ++VHTF+ G+ H + + S + +
Sbjct: 489 VKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 527
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 3/278 (1%)
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV 230
++ CA G K+ H +++ + DV + + ++ Y KCG ++ AR+VFD M ER++
Sbjct: 60 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 119
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCG-NSTLLELGRQIHG 289
VSW+ MI Y + AL +F E E ++FT SSV+ CG N LE +++H
Sbjct: 120 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHC 178
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
L +KT D KCG+I+ A +VF ++ W+SM+ Q+ + EE
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVD 409
L+ R + + + N T ++ ACS+ + +G+Q ++ G ++ VD
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+ + G L+E+ I + E +W ++G H
Sbjct: 299 MYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHA 335
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
++++C + + + HG ++ + KCG +E A +VF+ R+
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
L WN+M+ ++ E +F M+N G + + T +L AC + ++
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 391 LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
L I+ ++DL + G +++A+ + ++M + + W + + G
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAG 229
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 240/439 (54%), Gaps = 2/439 (0%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q HAHI+K L S P V + LI+ YS + L F+ + F+ A++K TW+++I +N
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDVFVG 202
S A+ YF +M + ++ S +KA + G+S+H ++TG DVF+G
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
SS VDMYGKC +A+KVFDEMP RNVV+W+ +I Y + + +F+E L D++
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
N+ T SSV+ C + L GR++H +K S + KCG +E A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F +N+ W +M+ A H + + F LF M + + PN +TF+ +L AC+HGGL+
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 383 DKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
++G++ F MK + +EP A HYA MVDL GR G L+EA +I+ MP+EPT VWGA
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
C LH D EL +AA R+ +L SG LL+N K ++D+ V K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 502 TGLSWIEEGNRVHTFAAGD 520
G SWIE ++ F A D
Sbjct: 544 PGFSWIEVKGKLCEFIAFD 562
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 5/333 (1%)
Query: 123 EAQEKSATTWSSVISSLAQNELPSLAIEY--FRQMIIDNIRPDDHIFPSAIKACAILGRC 180
+ Q S W S+I + + + + +R M + + P H FP +KA L R
Sbjct: 61 QLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKL-RD 119
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
HA +VK G D D FV +S + Y G A ++FD +++VV+W+ MI +
Sbjct: 120 SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGF 179
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS-YDXX 299
G A+ F E ++ N+ T SV++ G + GR +HGL L+T
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
KC + A +VF+E P RN+ W +++ Q ++ +F+ M
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
+ PN T +L AC+H G + +G++ M IE T++DL + G L+E
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 420 ALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
A+ + + + E W A + G HG A A
Sbjct: 360 AILVFERLH-EKNVYTWTAMINGFAAHGYARDA 391
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+++H ++IK+S++ LI+ Y K ++ FE EK+ TW+++I+ A
Sbjct: 324 RGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFA 383
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ A + F M+ ++ P++ F + + ACA G + G+ + +K F+++
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPK 442
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGED 246
+ VD++G+ G ++ A+ + + MP E V W G + LL +D
Sbjct: 443 ADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW-GALFGSCLLHKD 490
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 242/451 (53%), Gaps = 15/451 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIHA +K V + Y KT+L + + F+E E++ TW++ IS+
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC------DIGKSIHAFVVKTGF 195
+ P AIE F I+ R D H P++I CA L C ++G +H V+++GF
Sbjct: 187 DGRPREAIEAF----IEFRRIDGH--PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
D DV V + +D YGKC +I+++ +F EM +N VSW ++ AY EDE A L+
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ + + +DF SSV+ C LELGR IH +K + KCG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLL 373
IE + + F+E P +NL NS++ A + LF+ M + G PN++TF+ LL
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 374 YACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
ACS G ++ G + F M+ YGIEPGA+HY+ +VD+LGRAG ++ A + IK MPI+PT
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 433 ESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKM 492
SVWGA CR+HG +L AA+ +F+L SG +VLLSN +
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 493 LRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
L+ G+KK G SWI N+VH F A DRSH
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSH 571
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 167/348 (47%), Gaps = 1/348 (0%)
Query: 82 GQQIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+ +HA I+K+ P ++++LIN YSK P + ++ +W+S+IS LA
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN S A+ F +M + + P+D FP A KA A L GK IHA VK G +DVF
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG S DMY K +ARK+FDE+PERN+ +W+ I G A++ F E D
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
N TF + + C + L LG Q+HGL L++ +D KC I ++
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F E +N W S++ A Q+ E+ L+ R + + + +L AC+
Sbjct: 265 IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
++ G+ +E + +VD+ G+ G ++++ MP
Sbjct: 325 GLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 254/465 (54%), Gaps = 13/465 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G I H+ + + + + + LIN Y K L + Q F++ +++ +W+++IS+ +
Sbjct: 79 EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ ++ A+E M+ DN+RP+ + + S +++C G D+ + +H ++K G + DVF
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN--GMSDV-RMLHCGIIKEGLESDVF 195
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V S+ +D++ K GE ++A VFDEM + + W+ +I +A + AL+LFK
Sbjct: 196 VRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
T +SV+R C LLELG Q H +K YD KCG +E A
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
RVFN+ R++ W++M+ AQ+ +++E KLF+RMK+ G +PN+IT + +L+ACSH G
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L++ G YF MK YGI+P +HY M+DLLG+AGKL +A+ ++ M EP W
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L CR+ + LA +AA ++ L +G LLSN +RDRG+K
Sbjct: 434 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH-------EKAKRNLSEIGGIG 537
KE G SWIE ++H F GD SH +K + + + GIG
Sbjct: 494 KEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIG 538
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 241/473 (50%), Gaps = 33/473 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQL-----PVF-------------------- 116
G+QIH +IK +S LV L+ Y+ VF
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 117 ------SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
+LQ F EK + +W+++I LAQN L AIE FR+M + ++ D + F S
Sbjct: 218 CGMIEDALQLFR-GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV 230
+ AC LG + GK IHA +++T F ++VGS+ +DMY KC + A+ VFD M ++NV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
VSW+ M+ Y G E A+K+F + + + +T I C N + LE G Q HG
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
+ + KCG I+ ++R+FNE +R+ W +M+ A AQ E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVD 409
+LFD+M G++P+ +T ++ ACS GL++KGQ+YF LM +YGI P HY+ M+D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
L R+G+L+EA+ I MP P W L+ CR G+ E+ +AA+ + EL
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRS 522
LLS+ + +R++ VKKE G SWI+ ++H+F+A D S
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDES 629
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 166/383 (43%), Gaps = 40/383 (10%)
Query: 102 HHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID-NI 160
++L+ YSK L FE+ ++ TW+ +I + + L A++ + M+ D +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 161 RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARK 220
+ +K + G +GK IH V+K GF+ + VGS + MY G I +A+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 221 VFDEMPERNV------------------------------VSWSGMICAYALLGEDENAL 250
VF + +RN VSW+ MI A G + A+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 251 KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
+ F+E ++ L ++ + F SV+ CG + G+QIH ++T++
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 311 XKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
KC + A VF+ +N+ W +M++ Q EE K+F M+ G+ P+ T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT----MVDLLGRAGKLQEALDIIKA 426
+ AC++ +++G Q+ G I G HY T +V L G+ G + ++ +
Sbjct: 376 QAISACANVSSLEEGSQFHG----KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 427 MPIEPTESVWGAFLTGCRLHGDA 449
M + S W A ++ G A
Sbjct: 432 MNVRDAVS-WTAMVSAYAQFGRA 453
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 4/271 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+QIHA II+++ Q V LI+ Y K + ++ F+ ++K+ +W++++
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q A++ F M I PD + AI ACA + + G H + +G V
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S V +YGKCG+I ++ ++F+EM R+ VSW+ M+ AYA G ++LF + +
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX--XXXXXXXXXXXXXKCGVIEA 318
L + T + VI C + L+E G++ L + + Y + G +E
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKL-MTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 319 ASRVFNEAPIRNLGM-WNSMLIACAQHAHTE 348
A R N P + W ++L AC + E
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 135/351 (38%), Gaps = 66/351 (18%)
Query: 167 FPSAIKACAILG---RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+ IK C LG + K IH +++ + F+ ++ V Y AR+VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 224 EMPERNVVSWSGMICAYA---LLGEDENALKLFKE------------------------- 255
+P+ N+ SW+ ++ AY+ L+ E E+ + +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 256 --ALLEDLSVN--DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
++ D S N T +++++ ++ + LG+QIHG +K ++
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSM---LIAC--------------------------- 341
G I A +VF RN M+NS+ L+AC
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
AQ+ +E + F MK G++ + F +L AC G I++G+Q + +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ ++D+ + L A + M + S W A + G G AE A
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-WTAMVVGYGQTGRAEEA 355
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 246/458 (53%), Gaps = 3/458 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQ++HAH+IK+ + L+ FY K + + +E EK+ +W+++IS +Q
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
S A+ F +M+ + +P++ F + + +C +GK IH +VK +D +FV
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GSS +DMY K G+IK AR++F+ +PER+VVS + +I YA LG DE AL++F E +
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S N T++S++ LL+ G+Q H L+ KCG + A R
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGG 380
+F+ P R WN+ML+ ++H EV +LF M++ ++P+ +T L +L CSHG
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 381 LIDKGQQYFGLM--KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
+ D G F M +YG +PG +HY +VD+LGRAG++ EA + IK MP +PT V G+
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L CR+H ++ R+ E+ ++G V+LSN M+ + V
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
KE G SWI+ +H F A DR+H + + L+++ I
Sbjct: 491 TKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 528
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%)
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
+ +++ C + L G+++H +KT Y KC +E A +V +E P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 328 IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
+N+ W +M+ +Q H+ E +F M +PN TF +L +C + G+Q
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
GL+ + + ++++D+ +AG+++EA +I + +P
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 240/443 (54%), Gaps = 1/443 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH IK+ L +S+ L+ YSK + + + F+ + ++++ TWS++++ +Q
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A++ F +M I+P ++ + AC+ + + GK +H+F++K GF+ +F
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ VDMY K G + +ARK FD + ER+V W+ +I Y ++E AL L++ +
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
ND T +SV++ C + LELG+Q+HG +K + KCG +E +
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF P +++ WN+M+ + + +E +LF+ M GM P+ +TF+ ++ ACSH G
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++G YF +M D G++P HYA MVDLL RAG+L+EA + I++ I+ +W L
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+ C+ HG EL +A +++ LG S V LS K +R GV K
Sbjct: 600 SACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSK 659
Query: 501 ETGLSWIEEGNRVHTFAAGDRSH 523
E G SWIE N+ H F GD H
Sbjct: 660 EVGCSWIELKNQYHVFVVGDTMH 682
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 188/387 (48%), Gaps = 6/387 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H II++ + ++ L+NFY+K + F K +W+S+I+ +Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 142 NELPS---LAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
N S ++ FR+M +I P+ + KA + L +G+ HA VVK D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
++V +S V MY K G +++ KVF MPERN +WS M+ YA G E A+K+F L
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 259 --EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
E+ S +D+ F++V+ + + LGRQIH + +K KC +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
A ++F+ + RN W++M+ +Q+ + E KLF RM + G++P+ T + +L AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 377 SHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
S +++G+Q + G E +VD+ +AG L +A + E ++W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALW 391
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELG 463
+ ++G + D E A R+ G
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAG 418
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 9/376 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q HA ++K S V L+ Y K L L+ F E++ TWS+++S A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 142 NELPSLAIEYFRQMIIDNIR--PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
AI+ F + + D++F + + + A +G+ IH +K G V
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ ++ V MY KC + A K+FD +RN ++WS M+ Y+ GE A+KLF
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ +++T V+ C + LE G+Q+H LK ++ K G + A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+ F+ R++ +W S++ Q++ EE L+ RMK G+ PN T +L ACS
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 380 GLIDKGQQYFG--LMKDYGIE-PGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
++ G+Q G + +G+E P +TM + G L++ + + P + S W
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS---KCGSLEDGNLVFRRTPNKDVVS-W 492
Query: 437 GAFLTGCRLHGDAELA 452
A ++G +G + A
Sbjct: 493 NAMISGLSHNGQGDEA 508
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q+H+ ++K + + L++ Y+K + + F+ QE+ W+S+IS
Sbjct: 340 EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV 399
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN A+ +R+M I P+D S +KAC+ L ++GK +H +K GF ++V
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+GS+ MY KCG +++ VF P ++VVSW+ MI + G+ + AL+LF+E L E
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG-RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ +D TF ++I C + +E G + + + D + G ++ A
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 320 SRVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
A I L +W +L AC H E +++ +G R +
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 246/512 (48%), Gaps = 69/512 (13%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKT----QLPVFSLQAFEEAQEKSATTWSSVISSL 139
Q HA +KS I VS+ L++ YSK L + + F+E EK +W+++++
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 140 AQNELPSL--------------------------------AIEYFRQMIIDNIRPDDHIF 167
+N L A+E R+M+ I D+ +
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 168 PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE 227
PS I+ACA G +GK +HA+V++ D +S V +Y KCG+ AR +F++MP
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 228 RNVVSWSGMICAYALLGE-------------------------------DENALKLFKEA 256
+++VSW+ ++ Y G E LKLF
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
E D+ FS I+ C G+Q H LK +D KCGV+
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVV 468
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
E A +VF P + WN+++ A QH H E +++ M G+RP+ IT L +L AC
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Query: 377 SHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
SH GL+D+G++YF M+ Y I PGA HYA ++DLL R+GK +A +I+++P +PT +
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEI 588
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W A L+GCR+HG+ EL AAD++F L G +LLSN K++RD
Sbjct: 589 WEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRD 648
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
RGVKKE SWIE +VHTF D SH +A+
Sbjct: 649 RGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 180/469 (38%), Gaps = 107/469 (22%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQE--------------- 126
+ +H +II Q + + LI+ Y K+ ++ Q F+E E
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 127 ------------------KSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFP 168
+ ++++I+ + N AI F +M + +PD+ F
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 169 SAIKACAILGRCDIGKS---IHAFVVKTGFDVDVFVGSSTVDMYGKCGE----IKNARKV 221
S + A++ D K HA +K+G V ++ V +Y KC + +ARKV
Sbjct: 153 SVLAGLALVA--DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 222 FDEMPERNVVSWSGMICAYA-----------LLGEDEN---------------------A 249
FDE+ E++ SW+ M+ Y L G D+N A
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 250 LKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXX 309
L++ + + + +++FT+ SVIR C + LL+LG+Q+H L+ D
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSL 329
Query: 310 XXKCGVIEAASRVFNEAPIRNLGMWNS-------------------------------ML 338
KCG + A +F + P ++L WN+ M+
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIE 398
A++ EE KLF MK G P F + +C+ G GQQY + G +
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Query: 399 PGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
++ + + G ++EA + + MP + S W A + HG
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAALGQHG 497
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQ HA ++K S + LI Y+K + + Q F + +W+++I++L Q
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH-----AFVVKTGFD 196
+ + A++ + +M+ IRPD + + AC+ G D G+ + + G D
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGAD 555
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
+ +D+ + G+ +A V + +P
Sbjct: 556 ----HYARLIDLLCRSGKFSDAESVIESLP 581
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 238/426 (55%), Gaps = 19/426 (4%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I Y+++ + Q F+E+ + TW++++S QN + A E F D +
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF-----DKMPER 310
Query: 164 DHIFPSAIKACAILG-RCDIGKSIHAFVVKTGFDV----DVFVGSSTVDMYGKCGEIKNA 218
+ + +A+ A + G R ++ K + FDV +V ++ + Y +CG+I A
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKEL--------FDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 219 RKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNS 278
+ +FD+MP+R+ VSW+ MI Y+ G AL+LF + E +N +FSS + C +
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
LELG+Q+HG +K Y+ KCG IE A+ +F E +++ WN+M+
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGI 397
++H E + F+ MK G++P+ T + +L ACSH GL+DKG+QYF M +DYG+
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
P +QHYA MVDLLGRAG L++A +++K MP EP ++WG L R+HG+ ELA AAD
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 458 RIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFA 517
+IF + +SGM VLLSN +RD+GVKK G SWIE N+ HTF+
Sbjct: 603 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 662
Query: 518 AGDRSH 523
GD H
Sbjct: 663 VGDEFH 668
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 29/356 (8%)
Query: 105 INFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDD 164
I+ Y +T +L+ F+ S+ +++ +IS +N LA + F +M P+
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PER 124
Query: 165 HIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDE 224
+ + + ++GK+ F + + DV ++ + Y + G + +AR VFD
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 225 MPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELG 284
MPE+N VSW+ ++ AY + E A LFK L + ++ ++E
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK---KKKIVEAR 239
Query: 285 RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQH 344
+ + ++ + G I+ A ++F+E+P++++ W +M+ Q+
Sbjct: 240 QFFDSMNVRD-----VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
EE +LFD+M N +++ +L G ++ ++ F +M + +
Sbjct: 295 RMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST----W 346
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF 460
TM+ + GK+ EA ++ MP S W A + G G +F A R+F
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAGYSQSGH----SFEALRLF 397
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 18/285 (6%)
Query: 182 IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA 241
I KS ++K G D D+ + + Y + G A +VF MP + VS++GMI Y
Sbjct: 48 IQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYL 106
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
GE E A KLF E DL + +R LG+ + D
Sbjct: 107 RNGEFELARKLFDEMPERDLVSWNVMIKGYVRN------RNLGKARELFEIMPERDVCSW 160
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
C ++ A VF+ P +N WN++L A Q++ EE LF +N
Sbjct: 161 NTMLSGYAQNGC--VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ +++ CLL I + +Q+F M + + T++ ++GK+ EA
Sbjct: 219 L----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEAR 270
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
+ P++ + W A ++G + E A D++ E VS
Sbjct: 271 QLFDESPVQDVFT-WTAMVSGYIQNRMVEEARELFDKMPERNEVS 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H ++K ++ V + L+ Y K + F+E K +W+++I+ ++
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ +A+ +F M + ++PDD + + AC+ G D G+ + + D V
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ---DYGVMP 544
Query: 202 GSS----TVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENA 249
S VD+ G+ G +++A + MP E + W ++ A + G E A
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 241/448 (53%), Gaps = 3/448 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ +H I+K+ P V L+ Y++ + + F E + WS +I+ Q
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD-IGKSIHAFVVKTGFDVDVF 200
N + A++ F +M + P++ S + CAI G+C +G+ +H VVK GFD+D++
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI-GKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ +D+Y KC ++ A K+F E+ +N VSW+ +I Y LGE A +F+EAL
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+SV + TFSS + C + ++LG Q+HGL +KT+ KCG I+ A
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VFNE ++ WN+++ + H + ++ D MK+ +PN +TFL +L CS+ G
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Query: 381 LIDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
LID+GQ+ F +++D+GIEP +HY MV LLGR+G+L +A+ +I+ +P EP+ +W A
Sbjct: 565 LIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+ + E A +A+ I ++ VL+SN K +++ GVK
Sbjct: 625 LSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVK 684
Query: 500 KETGLSWIEEGNRVHTFAAGDRSHEKAK 527
KE GLSWIE VH F+ G H K
Sbjct: 685 KEPGLSWIEHQGDVHYFSVGLSDHPDMK 712
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 162/361 (44%), Gaps = 5/361 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ IH I+K ++ L+N Y K +L F+E E++ ++ + LAQ
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVT----LAQ 123
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
I + ++ + + H+F S +K L + +I +H+ +VK G+D + FV
Sbjct: 124 GYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ ++ Y CG + +AR VF+ + +++V W+G++ Y G E++LKL +
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N++TF + ++ + + +HG LKT Y + G + A +
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VFNE P ++ W+ M+ Q+ E LF RM+ + PN T +L C+ G
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
G+Q GL+ G + ++D+ + K+ A+ + + E W +
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIV 422
Query: 442 G 442
G
Sbjct: 423 G 423
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 10/275 (3%)
Query: 158 DNIRP--DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEI 215
D+I P D H + + ++ C K+IH ++K G +D+F + ++ Y K G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 216 KNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
K+A +FDEMPERN VS+ + YA ++ + L+ E +N F+S +++
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 276 GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWN 335
+ E+ +H +K YD CG +++A VF +++ +W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 336 SMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG--LMK 393
++ ++ + E+ KL M+ G PN TF L A G D + G L
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 394 DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
Y ++P ++ L + G + +A + MP
Sbjct: 277 CYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 244/494 (49%), Gaps = 48/494 (9%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQL-----PVFS------------------- 117
G+Q+H + S + V + L++ Y+K + VFS
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 118 -------LQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHI 166
++ FE+ QE+ TWS+ IS AQ L A+ RQM+ I+P++
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 167 FPSAIKACAILGRCDIGKSIHAFVVKTGFDV-------DVFVGSSTVDMYGKCGEIKNAR 219
S + CA +G GK IH + +K D+ + V + +DMY KC ++ AR
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 220 KVFDEMP--ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV--NDFTFSSVIRVC 275
+FD + ER+VV+W+ MI Y+ G+ AL+L E ED N FT S + C
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 276 GNSTLLELGRQIHGLCLKTSYDXX-XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMW 334
+ L +G+QIH L+ + KCG I A VF+ +N W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 335 NSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD 394
S++ H + EE +FD M+ +G + + +T L +LYACSH G+ID+G +YF MK
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 395 -YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAA 453
+G+ PG +HYA +VDLLGRAG+L AL +I+ MP+EP VW AFL+ CR+HG EL
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 454 FAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRV 513
+AA++I EL G LLSN ++R +GVKK G SW+E
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 514 HTFAAGDRSHEKAK 527
TF GD++H AK
Sbjct: 728 TTFFVGDKTHPHAK 741
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 184/422 (43%), Gaps = 45/422 (10%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLP-VFSLQAFEEAQEKSATTWSSVISSLAQNE 143
IH ++ + ++ L SH + + S L SL + W+S+I S N
Sbjct: 47 IHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNG 106
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
+ + F M + PD++ FP KAC + G+S HA + TGF +VFVG+
Sbjct: 107 CANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGN 166
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE-DLS 262
+ V MY +C + +ARKVFDEM +VVSW+ +I +YA LG+ + AL++F E
Sbjct: 167 ALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCR 226
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
++ T +V+ C + LG+Q+H + + KCG+++ A+ V
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK------------------------ 358
F+ ++++ WN+M+ +Q E+ +LF++M+
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 359 -----------NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT- 406
+ G++PN +T + +L C+ G + G++ Y I+ +
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 407 ------MVDLLGRAGKLQEALDIIKAM-PIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
++D+ + K+ A + ++ P E W + G HGDA A +
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 460 FE 461
FE
Sbjct: 467 FE 468
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 188/441 (42%), Gaps = 51/441 (11%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ HA + + S V + L+ YS+ + + + F+E +W+S+I S A+
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 142 NELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
P +A+E F +M + RPD+ + + CA LG +GK +H F V + ++F
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF------- 253
VG+ VDMY KCG + A VF M ++VVSW+ M+ Y+ +G E+A++LF
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 254 ----------------------------KEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
++ L + N+ T SV+ C + L G+
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 286 QIHGLCLKTSYDXXX-------XXXXXXXXXXXKCGVIEAASRVFNE-API-RNLGMWNS 336
+IH +K D KC ++ A +F+ +P R++ W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 337 MLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLLYACSHGGLIDKGQQY--FGLM 392
M+ +QH + +L M ++ RPN T C L AC+ + G+Q + L
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 393 KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
P ++D+ + G + +A + M + E W + +TG +HG E A
Sbjct: 506 NQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 453 AFAADRIFELGHVSSGMNVLL 473
D + +G G+ +L+
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLV 584
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 233/443 (52%), Gaps = 1/443 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H I++ + + L+N Y+K + FE K +++++I+ AQ
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQ 183
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ + A+ R+M +++PD S + + GK IH +V++ G D DV++
Sbjct: 184 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 243
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GSS VDMY K I+++ +VF + R+ +SW+ ++ Y G AL+LF++ + +
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 303
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
FSSVI C + L LG+Q+HG L+ + KCG I+AA +
Sbjct: 304 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 363
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F+ + + W ++++ A H H E LF+ MK G++PN + F+ +L ACSH GL
Sbjct: 364 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 423
Query: 382 IDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D+ YF M K YG+ +HYA + DLLGRAGKL+EA + I M +EPT SVW L
Sbjct: 424 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 483
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+ C +H + ELA A++IF + + G VL+ N +R +G++K
Sbjct: 484 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 543
Query: 501 ETGLSWIEEGNRVHTFAAGDRSH 523
+ SWIE N+ H F +GDRSH
Sbjct: 544 KPACSWIEMKNKTHGFVSGDRSH 566
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 183/373 (49%), Gaps = 4/373 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHL-INFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
+ +Q+HA I++ QS+ S + I+ Y+ +L +L F+ + W SVI
Sbjct: 23 QAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
L S A+ F +M PD ++FPS +K+C ++ G+S+H F+V+ G D D+
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ G++ ++MY K + + R+VF+ MP ++VVS++ +I YA G E+AL++ +E
Sbjct: 141 YTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 200
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
DL + FT SSV+ + + G++IHG ++ D K IE +
Sbjct: 201 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RVF+ R+ WNS++ Q+ E +LF +M ++P + F ++ AC+H
Sbjct: 261 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 320
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ G+Q G + G + +VD+ + G ++ A I M + E W A
Sbjct: 321 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAI 379
Query: 440 LTGCRLHGDAELA 452
+ G LHG A
Sbjct: 380 IMGHALHGHGHEA 392
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG++IH ++I+ + S + L++ Y+K+ S + F + +W+S+++
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 283
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN + A+ FRQM+ ++P F S I ACA L +GK +H +V++ GF ++F
Sbjct: 284 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 343
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ S+ VDMY KCG IK ARK+FD M + VSW+ +I +AL G A+ LF+E +
Sbjct: 344 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG-------RQIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
+ N F +V+ C + L++ +++GL + +
Sbjct: 404 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL------NQELEHYAAVADLLGRA 457
Query: 314 GVIEAASRVFNEAPIRNLG-MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP-NFITFLC 371
G +E A ++ + G +W+++L +C+ H + E K+ +++ V +C
Sbjct: 458 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 517
Query: 372 LLYA 375
+YA
Sbjct: 518 NMYA 521
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 240/448 (53%), Gaps = 1/448 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IH + ++S S+ +S L++ Y+K + Q F+ E++ +W+S+I + Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
NE P A+ F++M+ + ++P D A+ ACA LG + G+ IH V+ G D +V V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY KC E+ A +F ++ R +VSW+ MI +A G +AL F + +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ FT+ SVI ++ + IHG+ +++ D KCG I A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F+ R++ WN+M+ H + +LF+ M+ ++PN +TFL ++ ACSH GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 382 IDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
++ G + F +MK +Y IE HY MVDLLGRAG+L EA D I MP++P +V+GA L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
C++H + A AA+R+FEL G +VLL+N + +G++K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAKR 528
G S +E N VH+F +G +H +K+
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 5/380 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IH ++KS L N Y+K + + + F+ E+ +W+++++ +Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N + +A+E + M +N++P S + A + L +GK IH + +++GFD V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ VDMY KCG ++ AR++FD M ERNVVSW+ MI AY + A+ +F++ L E +
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
D + + C + LE GR IH L ++ D KC ++ A+
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F + R L WN+M++ AQ+ + F +M++ ++P+ T++ ++ A + +
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ G++ ++ +VD+ + G + A I M E + W A +
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 512
Query: 442 GCRLHGDAELAAFAADRIFE 461
G HG + AA +FE
Sbjct: 513 GYGTHGFGK----AALELFE 528
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 179/365 (49%), Gaps = 1/365 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QI + K+ L L++ + + + + FE K + +++ A+
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A+++F +M D++ P + F +K C +GK IH +VK+GF +D+F
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ +MY KC ++ ARKVFD MPER++VSW+ ++ Y+ G AL++ K E+L
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ T SV+ L+ +G++IHG +++ +D KCG +E A ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F+ RN+ WNSM+ A Q+ + +E +F +M + G++P ++ + L+AC+ G +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++G+ L + G++ +++ + + ++ A + + S W A + G
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS-WNAMILG 412
Query: 443 CRLHG 447
+G
Sbjct: 413 FAQNG 417
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IH ++ L V + LI+ Y K + + F + Q ++ +W+++I A
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN P A+ YF QM ++PD + S I A A L K IH V+++ D +VF
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ VDMY KCG I AR +FD M ER+V +W+ MI Y G + AL+LF+E
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEA 318
+ N TF SVI C +S L+E G + + +K +Y + + G +
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYM-MKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 319 ASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRM 357
A + P++ + ++ +ML AC H + K +R+
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 241/487 (49%), Gaps = 39/487 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG Q+H+ I KS S + L++ YSK + + F+E +++ +W+S+I+
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDV 199
QN A++ F+ M+ + PD+ S I ACA L +G+ +H VVK D+
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP-------------------------------ER 228
+ ++ VDMY KC IK AR +FD MP ER
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
NVVSW+ +I Y GE+E AL LF E + ++F+++++ C + L LG Q H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 289 ------GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
G ++ + KCG +E VF + R+ WN+M+I A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGA 401
Q+ + E +LF M G +P+ IT + +L AC H G +++G+ YF M +D+G+ P
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
HY MVDLLGRAG L+EA +I+ MP++P +WG+ L C++H + L + A+++ E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 462 LGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDR 521
+ +SG VLLSN K +R GV K+ G SWI+ H F D+
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 522 SHEKAKR 528
SH + K+
Sbjct: 650 SHPRKKQ 656
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 168/356 (47%), Gaps = 36/356 (10%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKT--------------QLPVFSLQA---------- 120
+HA +IKS + + + LI+ YSK Q +++ +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 121 -------FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKA 173
F E+ TW+S++S AQ++ A+ YF M + +++ F S + A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 174 CAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSW 233
C+ L + G +H+ + K+ F DV++GS+ VDMY KCG + +A++VFDEM +RNVVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 234 SGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK 293
+ +I + G AL +F+ L + ++ T +SVI C + + +++G+++HG +K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 294 TS-YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFK 352
KC I+ A +F+ PIRN+ SM+ A A T+
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 353 LFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
+F +M N +++ L+ + G ++ F L+K + P +A ++
Sbjct: 342 MFTKMA----ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 32/278 (11%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN-------------- 229
+ +HA V+K+GF ++F+ + +D Y KCG +++ R+VFD+MP+RN
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 230 -----------------VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI 272
+W+ M+ +A E AL F E +N+++F+SV+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
C + G Q+H L K+ + KCG + A RVF+E RN+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG-L 391
WNS++ Q+ E +F M + P+ +T ++ AC+ I GQ+ G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 392 MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI 429
+K+ + VD+ + +++EA I +MPI
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 235/446 (52%), Gaps = 2/446 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFE--EAQEKSATTWSSVISSL 139
G+ +HA + + + V + LI Y+K + + FE E++ +W++++S+
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
AQN P A+E F QM +++PD S + A L G+SIHA VVK G +++
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ S MY KCG++ A+ +FD+M N++ W+ MI YA G A+ +F E + +
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
D+ + + +S I C LE R ++ ++ Y KCG +E A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF+ R++ +W++M++ H E L+ M+ G+ PN +TFL LL AC+H
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G++ +G +F M D+ I P QHYA ++DLLGRAG L +A ++IK MP++P +VWGA
Sbjct: 438 GMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+ C+ H EL +AA ++F + ++G V LSN ++++G+
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 500 KETGLSWIEEGNRVHTFAAGDRSHEK 525
K+ G SW+E R+ F GD+SH +
Sbjct: 558 KDVGCSWVEVRGRLEAFRVGDKSHPR 583
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 4/385 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QIHA ++ LQ + LI+ S F+ Q F++ W+++I ++N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A+ + M + + PD FP +KAC+ L +G+ +HA V + GFD DVFV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 203 SSTVDMYGKCGEIKNARKVFD--EMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ + +Y KC + +AR VF+ +PER +VSW+ ++ AYA GE AL++F + D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + SV+ L+ GR IH +K + KCG + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F++ NL +WN+M+ A++ + E +F M N +RP+ I+ + AC+ G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++ + + + + ++D+ + G ++ A ++ ++ VW A +
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMI 396
Query: 441 TGCRLHGDAELAAFAADRIFELGHV 465
G LHG A A + R E G V
Sbjct: 397 VGYGLHGRAR-EAISLYRAMERGGV 420
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 134/269 (49%), Gaps = 1/269 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IHA ++K L+ P + L Y+K + F++ + + W+++IS A
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+N AI+ F +MI ++RPD SAI ACA +G + +S++ +V ++ + DVF
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ S+ +DM+ KCG ++ AR VFD +R+VV WS MI Y L G A+ L++
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ND TF ++ C +S ++ G + + G ++ A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 321 RVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
V P++ + +W ++L AC +H H E
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVE 508
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 242/458 (52%), Gaps = 6/458 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKS--ATTWSSVISSL 139
GQQ+H H+ K ++ P V LI+ Y K L + + FEE + S + ++++IS
Sbjct: 72 GQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY 131
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N + A FR+M + D + C + +G+S+H VK G D +V
Sbjct: 132 TANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V +S + MY KCG ++ R++FDEMP + +++W+ +I Y+ G + L+L+++
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + FT SV+ C + ++G ++ L + +CG + A
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF+ P+++L W +M+ H E LFD M G+RP+ F+ +L ACSH
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 380 GLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL DKG + F MK +Y +EPG +HY+ +VDLLGRAG+L EA++ I++MP+EP +VWGA
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGA 431
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C++H + ++A A ++ E + G VL+SN M+R+R
Sbjct: 432 LLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAF 491
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAK---RNLSEI 533
+K+ G S++E RVH F AGDRSHE+ + R L E+
Sbjct: 492 RKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 3/338 (0%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
++T W+ + LA L S +I +R M+ PD FP +K+CA L G+ +H
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVS--WSGMICAYALLGE 245
V K G + + FV ++ + MY KCG + +ARKVF+E P+ + +S ++ +I Y +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
+A +F+ +SV+ T ++ +C L LGR +HG C+K D
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 306 XXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
KCG +EA R+F+E P++ L WN+++ +Q+ +V +L+++MK+ G+ P+
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
T + +L +C+H G G + L++ G P + + R G L +A +
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
MP++ S W A + +HG E+ D + + G
Sbjct: 317 IMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 232/446 (52%), Gaps = 1/446 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH+ IIK++ Q V LI+ Y+K + K +W+++I+ Q
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+ FRQM+ IR D+ +A+ ACA L G+ IHA +GF D+
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ V +Y +CG+I+ + F++ + ++W+ ++ + G +E AL++F E +
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N+FTF S ++ + ++ G+Q+H + KT YD KCG I A +
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
F E +N WN+++ A ++H E FD+M + +RPN +T + +L ACSH GL
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808
Query: 382 IDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+DKG YF M +YG+ P +HY +VD+L RAG L A + I+ MPI+P VW L
Sbjct: 809 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+ C +H + E+ FAA + EL S VLLSN + ++++GVKK
Sbjct: 869 SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKK 928
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKA 526
E G SWIE N +H+F GD++H A
Sbjct: 929 EPGQSWIEVKNSIHSFYVGDQNHPLA 954
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 167/342 (48%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QIHA I+ L+ +V + LI+ YS+ + + F+ + K ++W ++IS L++N
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
E + AI F M + I P + F S + AC + +IG+ +H V+K GF D +V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
++ V +Y G + +A +F M +R+ V+++ +I + G E A++LFK L+ L
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ T +S++ C L G+Q+H K + KC IE A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F E + N+ +WN ML+A F++F +M+ + PN T+ +L C G +
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDII 424
+ G+Q + + A + ++D+ + GKL A DI+
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 179/375 (47%), Gaps = 9/375 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H ++K S V + L++ Y + + F ++ A T++++I+ L+Q
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+E F++M +D + PD + S + AC+ G G+ +HA+ K GF + +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ +++Y KC +I+ A F E NVV W+ M+ AY LL + N+ ++F++ +E++
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N +T+ S+++ C LELG QIH +KT++ K G ++ A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+ +++ W +M+ Q+ ++ F +M + G+R + + + AC+
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES----VWG 437
+ +GQQ G +V L R GK++E+ + E TE+ W
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAWN 661
Query: 438 AFLTGCRLHGDAELA 452
A ++G + G+ E A
Sbjct: 662 ALVSGFQQSGNNEEA 676
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 2/369 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+++H+ I+K L S +S L +FY + + F+E E++ TW+ +I LA
Sbjct: 103 EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA 162
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-DIGKSIHAFVVKTGFDVDV 199
L F +M+ +N+ P++ F ++AC D+ + IHA ++ G
Sbjct: 163 SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDST 222
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V + +D+Y + G + AR+VFD + ++ SW MI + + A++LF + +
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + FSSV+ C LE+G Q+HGL LK + G + +A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+F+ R+ +N+++ +Q + E+ +LF RM G+ P+ T L+ ACS
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G + +GQQ G + +++L + ++ ALD +E +W
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV-VLWNVM 461
Query: 440 LTGCRLHGD 448
L L D
Sbjct: 462 LVAYGLLDD 470
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+GQQIHA S S + L+ YS+ S AFE+ + W++++S
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q+ A+ F +M + I ++ F SA+KA + GK +HA + KTG+D +
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ + MY KCG I +A K F E+ +N VSW+ +I AY+ G AL F + + +
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG-------RQIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
+ N T V+ C + L++ G +GL K + +
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEH------YVCVVDMLTRA 842
Query: 314 GVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
G++ A E PI+ + +W ++L AC H + E
Sbjct: 843 GLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 878
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 146/342 (42%), Gaps = 47/342 (13%)
Query: 150 EYFRQMIIDN-----IRPDDHIFPSAIKAC-AILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
E F++ ID+ IRP+ ++ C G D G+ +H+ ++K G D + +
Sbjct: 65 ESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA---LLGEDENALKLFKEALLED 260
D Y G++ A KVFDEMPER + +W+ MI A L+GE LF + E+
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE---VFGLFVRMVSEN 181
Query: 261 LSVNDFTFSSVIRVC-GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
++ N+ TFS V+ C G S ++ QIH L + G ++ A
Sbjct: 182 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLA 241
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RVF+ +++ W +M+ +++ E +LF M +G+ P F +L AC
Sbjct: 242 RRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 301
Query: 380 GLIDKGQQYFGLMKDYGIEP-------------------GAQH------------YATMV 408
++ G+Q GL+ G A+H Y T++
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 409 DLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHG 447
+ L + G ++A+++ K M +EP + + + C G
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 235/446 (52%), Gaps = 2/446 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QIH +I++ S+ ++ LI+ Y K + + F + ++++IS N
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
L ++E FR ++ I P++ S + IL +G+ +H F++K GFD +G
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG 479
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ +DMY KCG + A ++F+ + +R++VSW+ MI A A+ +F++ + +
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC 539
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ + S+ + C N G+ IHG +K S KCG ++AA V
Sbjct: 540 YDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGL 381
F +N+ WNS++ AC H ++ LF M + G+RP+ ITFL ++ +C H G
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659
Query: 382 IDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D+G ++F + +DYGI+P +HYA +VDL GRAG+L EA + +K+MP P VWG L
Sbjct: 660 VDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CRLH + ELA A+ ++ +L +SG VL+SN ++++R V+K
Sbjct: 720 GACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQK 779
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKA 526
G SWIE R H F +GD +H ++
Sbjct: 780 IPGYSWIEINKRTHLFVSGDVNHPES 805
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 1/366 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H ++ S + + + L++ YSK + + F TW+ +IS Q
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L ++ +F +MI + PD F S + + + + K IH ++++ +D+F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
S+ +D Y KC + A+ +F + +VV ++ MI Y G ++L++F+ + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S N+ T S++ V G L+LGR++HG +K +D KCG + A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F R++ WNSM+ CAQ + +F +M G+ + ++ L AC++
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
G+ G M + + +T++D+ + G L+ A+++ K M E W + +
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIA 616
Query: 442 GCRLHG 447
C HG
Sbjct: 617 ACGNHG 622
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 158/356 (44%), Gaps = 12/356 (3%)
Query: 24 LVERIKPELKPQQTPLNQPVFEQNYKPPQNLNQFSFEEKYRHICEXXXXXXXXXXXXKGQ 83
+ +R P + P + L P +N ++F E R + +G+
Sbjct: 6 VAKRFAPAIAPYKKSL----------PLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGK 55
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFE--EAQEKSATTWSSVISSLAQ 141
Q+HA +I +S+ ++ Y+ + F + + S W+S+ISS +
Sbjct: 56 QVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVR 115
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L + A+ ++ +M+ + PD FP +KAC L + V G D + FV
Sbjct: 116 NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFV 175
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
SS + Y + G+I K+FD + +++ V W+ M+ YA G ++ +K F ++ +
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQI 235
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S N TF V+ VC + L++LG Q+HGL + + D KCG + AS+
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
+F + WN M+ Q EE F M + G+ P+ ITF LL + S
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 3/270 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++H IIK + + +I+ Y+K + + FE ++ +W+S+I+ AQ
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
++ PS AI+ FRQM + I D +A+ ACA L GK+IH F++K DV+
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED- 260
S+ +DMY KCG +K A VF M E+N+VSW+ +I A G+ +++L LF E + +
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG-RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + TF +I C + ++ G R + + G + A
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 320 SRVFNEAPI-RNLGMWNSMLIACAQHAHTE 348
P + G+W ++L AC H + E
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVE 729
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 144/336 (42%), Gaps = 4/336 (1%)
Query: 108 YSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIF 167
Y K +P + F+ +K W+ +++ A+ I+ F M +D I P+ F
Sbjct: 186 YGKIDVPS---KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 168 PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE 227
+ CA D+G +H VV +G D + + +S + MY KCG +A K+F M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
+ V+W+ MI Y G E +L F E + + + TFSS++ LE +QI
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
H ++ S KC + A +F++ ++ ++ +M+ +
Sbjct: 363 HCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLY 422
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
+ ++F + V + PN IT + +L + G++ G + G + +
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAV 482
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
+D+ + G++ A +I + + S W + +T C
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 240/451 (53%), Gaps = 5/451 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA- 140
G Q+HA+ IK++L + V++ LI+ Y+K + + F+ ++++I +
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 141 ---QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
Q EL A+ FR M IRP F S ++A A L + K IH + K G ++
Sbjct: 429 LGTQWELHE-ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
D+F GS+ +D+Y C +K++R VFDEM +++V W+ M Y E+E AL LF E
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
L ++FTF++++ GN ++LG++ H LK + KCG E
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A + F+ A R++ WNS++ + A H ++ ++ ++M + G+ PN+ITF+ +L ACS
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
H GL++ G + F LM +GIEP +HY MV LLGRAG+L +A ++I+ MP +P VW
Sbjct: 668 HAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
+ L+GC G+ ELA AA+ SG +LSN + ++ G
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSHEKAKR 528
V KE G SWI VH F + D+SH KA +
Sbjct: 788 VVKEPGRSWIGINKEVHIFLSKDKSHCKANQ 818
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 8/376 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIHAHI++ L+ + + LI+ Y K + + + F K+ +W++++S Q
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L A+E F M ++PD + S + +CA L G +HA+ +K D +V
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG---EDENALKLFKEALL 258
+S +DMY KC + +ARKVFD +VV ++ MI Y+ LG E AL +F++
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+ + TF S++R + T L L +QIHGL K + C ++
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+ VF+E +++L +WNSM Q + EE LF ++ RP+ TF ++ A +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV--W 436
+ GQ++ + G+E ++D+ + G ++A KA + V W
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH---KAFDSAASRDVVCW 624
Query: 437 GAFLTGCRLHGDAELA 452
+ ++ HG+ + A
Sbjct: 625 NSVISSYANHGEGKKA 640
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 183/359 (50%), Gaps = 22/359 (6%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN-- 142
+H II L+ +S+ LIN YS+ V++ + FE+ E++ +WS+++S+ +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 143 --ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAIL---GRCDIGKSIHAFVVKTGFDV 197
E + +E++R P+++I S I+AC+ L GR + + + +F+VK+GFD
Sbjct: 126 YEESLVVFLEFWRT---RKDSPNEYILSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFDR 181
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DV+VG+ +D Y K G I AR VFD +PE++ V+W+ MI +G +L+LF + +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+++ + + S+V+ C LE G+QIH L+ + KCG +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
AA ++FN P +N+ W ++L Q+A +E +LF M G++P+ +L +C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 378 HGGLIDKGQQYFGLMKDYGIEP--GAQHYAT--MVDLLGRAGKLQEA---LDIIKAMPI 429
+ G Q + Y I+ G Y T ++D+ + L +A DI A +
Sbjct: 362 SLHALGFGTQ----VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 174/362 (48%), Gaps = 4/362 (1%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q+ + ++KS V LI+FY K ++ F+ EKS TW+++IS +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
++++ F Q++ DN+ PD +I + + AC+IL + GK IHA +++ G ++D + +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
+D Y KCG + A K+F+ MP +N++SW+ ++ Y + A++LF L
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 264 NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVF 323
+ + SS++ C + L G Q+H +K + KC + A +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 324 NEAPIRNLGMWNSMLIACAQ---HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+ ++ ++N+M+ ++ E +F M+ +RP+ +TF+ LL A +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ +Q GLM YG+ + ++D+ L+++ + M ++ +W +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL-VIWNSMF 527
Query: 441 TG 442
G
Sbjct: 528 AG 529
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE 245
+H ++ G ++D ++ + +++Y + G + ARKVF++MPERN+VSWS M+ A G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 246 DENALKLFKEAL-LEDLSVNDFTFSSVIRVCGNSTLLELGR----QIHGLCLKTSYDXXX 300
E +L +F E S N++ SS I+ C S L GR Q+ +K+ +D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
K G I+ A VF+ P ++ W +M+ C + + +LF ++
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
+ P+ +L ACS ++ G+Q + YG+E A ++D + G++ A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 421 LDIIKAMPIEPTESVWGAFLTGCR---LHGDA 449
+ MP + S W L+G + LH +A
Sbjct: 304 HKLFNGMPNKNIIS-WTTLLSGYKQNALHKEA 334
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 249/509 (48%), Gaps = 67/509 (13%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-------------------------- 115
G+++H+ I+K L+ VS+ L+N Y+K P+
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 116 -----FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNI-RPDDHIFPS 169
++ FE+ E+ TW+S+IS Q A++ F +M+ D++ PD S
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARK--------- 220
+ ACA L + IGK IH+ +V TGFD+ V ++ + MY +CG ++ AR+
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 221 ------------------------VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
+F + +R+VV+W+ MI Y G A+ LF+
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
+ N +T ++++ V + L G+QIHG +K+ K G I
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 317 EAASRVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ASR F+ R+ W SM+IA AQH H EE +LF+ M G+RP+ IT++ + A
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 376 CSHGGLIDKGQQYFGLMKDYG-IEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
C+H GL+++G+QYF +MKD I P HYA MVDL GRAG LQEA + I+ MPIEP
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 435 VWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLR 494
WG+ L+ CR+H + +L AA+R+ L +SG L+N K ++
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 495 DRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
D VKKE G SWIE ++VH F D +H
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 181/467 (38%), Gaps = 96/467 (20%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
Q +H +IKS L + ++L+N YSKT + + + F+E ++A +W++V+S+ ++
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 142 -----------NELPSL--------------------AIEYFRQMIIDNIRPDDHIFPSA 170
++LP AI M+ + I P +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD------- 223
+ + A + GK +H+F+VK G +V V +S ++MY KCG+ A+ VFD
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 224 ------------------------EMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+M ER++V+W+ MI + G D AL +F + L +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 260 D-LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
LS + FT +SV+ C N L +G+QIH + T +D +CG +E
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 319 ASRVFNEAPIRNLGM---------------------------------WNSMLIACAQHA 345
A R+ + ++L + W +M++ QH
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
E LF M G RPN T +L S + G+Q G G
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
++ + +AG + A + E W + + HG AE A
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 237/446 (53%), Gaps = 2/446 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q+H H IK + S VS LI+ YS+ + + FE W+++++ Q+
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
++ F M R DD + K C L + GK +HA+ +K+G+D+D++V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S +DMY KCG++ A+ FD +P + V+W+ MI GE+E A +F + L +
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
++FT +++ + T LE GRQIH LK + KCG I+ A +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F + N+ WN+ML+ AQH +E +LF +MK++G++P+ +TF+ +L ACSH GL+
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 383 DKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ ++ M DYGI+P +HY+ + D LGRAG +++A ++I++M +E + S++ L
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
CR+ GD E A ++ EL + S VLLSN M++ VKK+
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 502 TGLSWIEEGNRVHTFAAGDRSHEKAK 527
G SWIE N++H F DRS+ + +
Sbjct: 856 PGFSWIEVKNKIHIFVVDDRSNRQTE 881
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 3/370 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQ+H +K L + VS+ LIN Y K + F+ F+ E+ +W+SVI+ +AQ
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGR-CDIGKSIHAFVVKTGFDVDVF 200
N L A+ F Q++ ++PD + S +KA + L + K +H +K D F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ +D Y + +K A +F E ++V+W+ M+ Y + LKLF +
Sbjct: 454 VSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+DFT ++V + CG + G+Q+H +K+ YD KCG + AA
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
F+ P+ + W +M+ C ++ E F +F +M+ +G+ P+ T L A S
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++G+Q ++VD+ + G + +A + K + + + W A L
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI-TAWNAML 691
Query: 441 TGCRLHGDAE 450
G HG+ +
Sbjct: 692 VGLAQHGEGK 701
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 4/213 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q+HA+ IKS VS +++ Y K + AF+ W+++IS
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+N A F QM + + PD+ + KA + L + G+ IHA +K D F
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+S VDMY KCG I +A +F + N+ +W+ M+ A GE + L+LFK+
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG----RQIHG 289
+ + TF V+ C +S L+ R +HG
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 7/310 (2%)
Query: 146 SLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSST 205
S ++ F M+ ++ D F + + +G+ +H +K G D+ + V +S
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 206 VDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVND 265
++MY K + AR VFD M ER+++SW+ +I A G + A+ LF + L L +
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 266 FTFSSVIRVCGNSTL---LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+T +SV++ S+L L L +Q+H +K + + ++ A +
Sbjct: 417 YTMTSVLKAA--SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F +L WN+M+ Q + KLF M G R + T + C I
Sbjct: 475 FERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++G+Q G + + ++D+ + G + A ++P+ P + W ++G
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISG 592
Query: 443 CRLHGDAELA 452
C +G+ E A
Sbjct: 593 CIENGEEERA 602
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 182 IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA 241
+GK HA ++ + + F+ ++ + MY KCG + AR+VFD+MP+R++VSW+ ++ AYA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 242 LLGE-----DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
E + A LF+ + + + T S ++++C +S + HG K
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
D K G ++ +F E P R++ +WN ML A + EE L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
+ G+ PN IT L A G D GQ
Sbjct: 237 FHSSGLNPNEITL--RLLARISGDDSDAGQ 264
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ HA I+ + ++LI+ YSK ++ + F++ ++ +W+S++++ AQ
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 142 N-----ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
+ E A FR + D + +K C G +S H + K G D
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
D FV + V++Y K G++K + +F+EMP R+VV W+ M+ AY +G E A+ L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 257 LLEDLSVNDFTFSSVIRVCGNST 279
L+ N+ T + R+ G+ +
Sbjct: 238 HSSGLNPNEITLRLLARISGDDS 260
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNL 331
+R S+ L LG+ H L + KCG + A RVF++ P R+L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 332 GMWNSMLIACAQHA-----HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
WNS+L A AQ + + ++ F LF ++ + + +T +L C H G + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
+ G G++ +V++ + GK++E + + MP
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+QIHA+ +K + + P V L++ Y+K + F+ + + T W++++ LA
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLA 695
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-DIGKSIHAFVVKTGFDVDV 199
Q+ ++ F+QM I+PD F + AC+ G + K + + G ++
Sbjct: 696 QHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEAL- 257
S D G+ G +K A + + M E + + ++ A + G+ E ++ + L
Sbjct: 756 EHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Query: 258 LEDLSVNDFTFSS 270
LE L + + S
Sbjct: 816 LEPLDSSAYVLLS 828
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%)
Query: 213 GEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI 272
G++K+ D ++ + + Y G+ LK F + + D+ + TF ++
Sbjct: 263 GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
L LG+Q+H + LK D K A VF+ R+L
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
WNS++ AQ+ E LF ++ G++P+ T +L A S
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 230/430 (53%), Gaps = 7/430 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ H +I + +S L Y + PV + + F+E E W++V+S+ ++
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 142 NELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N+L A+ F M + PD F + + AC L R GK IH ++ G +V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V SS +DMYGKCG ++ AR+VF+ M ++N VSWS ++ Y GE E A+++F+E +D
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
L + F +V++ C + LG++IHG ++ K G I++AS
Sbjct: 362 L----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
RV+++ IRN+ WN+ML A AQ+ EE F+ M G++P++I+F+ +L AC H G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
++D+G+ YF LM K YGI+PG +HY+ M+DLLGRAG +EA ++++ S+WG
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 440 LTGCRLHGDA-ELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C + DA +A A R+ EL VLLSN K++ RGV
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 499 KKETGLSWIE 508
K G SWI+
Sbjct: 598 AKTVGQSWID 607
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 180/377 (47%), Gaps = 15/377 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVF-SLQAFEEAQEKSATTWSSVISSLA 140
G Q HAH++KS L++ V + L++ Y K + + + F+ K A +W+S++S
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ A+E F +M+ + ++ SA+KAC+ LG +G+ H V+ GF+ + F
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF-----KE 255
+ S+ +YG E +AR+VFDEMPE +V+ W+ ++ A++ E AL LF +
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
L+ D S TF +V+ CGN L+ G++IHG + KCG
Sbjct: 260 GLVPDGS----TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ A +VFN +N W+++L Q+ E+ ++F M+ + F +L A
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKA 371
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
C+ + G++ G G + ++DL G++G + A + M I +
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT- 430
Query: 436 WGAFLTGCRLHGDAELA 452
W A L+ +G E A
Sbjct: 431 WNAMLSALAQNGRGEEA 447
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 6/272 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IH +I + + S +V L++ Y K + Q F +K++ +WS+++
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN AIE FR+M D + F + +KACA L +GK IH V+ G +V
Sbjct: 343 QNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V S+ +D+YGK G I +A +V+ +M RN+++W+ M+ A A G E A+ F + + +
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + +F +++ CG++ +++ GR L K+ + G+ E A
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 320 SRVFNEAPIRN-LGMWNSMLIACAQHAHTEEV 350
+ A RN +W +L CA +A V
Sbjct: 519 ENLLERAECRNDASLWGVLLGPCAANADASRV 550
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 236/444 (53%), Gaps = 2/444 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H+ +K+ + L++ YSK + F E ++S +++S+I+ A+
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L A++ F +M + I PD + + + CA D GK +H ++ + D+FV
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED- 260
++ +DMY KCG ++ A VF EM ++++SW+ +I Y+ AL LF L E
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
S ++ T + V+ C + + + GR+IHG ++ Y KCG + A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F++ ++L W M+ H +E LF++M+ G+ + I+F+ LLYACSH G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 381 LIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+D+G ++F +M+ + IEP +HYA +VD+L R G L +A I+ MPI P ++WGA
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L GCR+H D +LA A+++FEL ++G VL++N K + RG++
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH 523
K G SWIE RV+ F AGD S+
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSN 758
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 178/367 (48%), Gaps = 2/367 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H I+KS V + L+ FY K Q + + F+E E+ +W+S+I+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L + F QM++ I D S CA +G+++H+ VK F +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +DMY KCG++ +A+ VF EM +R+VVS++ MI YA G A+KLF+E E +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S + +T ++V+ C LL+ G+++H + KCG ++ A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFD-RMKNVGMRPNFITFLCLLYACSHGG 380
VF+E ++++ WN+++ +++ + E LF+ ++ P+ T C+L AC+
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
DKG++ G + G ++VD+ + G L A + + + S W +
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS-WTVMI 572
Query: 441 TGCRLHG 447
G +HG
Sbjct: 573 AGYGMHG 579
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 163/324 (50%), Gaps = 1/324 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+ F+E + + A W+ +++ LA++ S +I F++M+ + D + F K+ + L
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMIC 238
G+ +H F++K+GF VG+S V Y K + +ARKVFDEM ER+V+SW+ +I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
Y G E L +F + L+ + ++ T SV C +S L+ LGR +H + +K +
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK 358
KCG +++A VF E R++ + SM+ A+ E KLF+ M+
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 359 NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQ 418
G+ P+ T +L C+ L+D+G++ +K+ + ++D+ + G +Q
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 419 EALDIIKAMPIEPTESVWGAFLTG 442
EA + M ++ S W + G
Sbjct: 450 EAELVFSEMRVKDIIS-WNTIIGG 472
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 136/283 (48%), Gaps = 10/283 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+++H I ++ L VS+ L++ Y+K + F E + K +W+++I +
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 141 QNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+N + A+ F ++ + PD+ + ACA L D G+ IH ++++ G+ D
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V +S VDMY KCG + A +FD++ +++VSW+ MI Y + G + A+ LF +
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELG-RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+ ++ +F S++ C +S L++ G R + + + + + G +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 319 ASRVFNEAPI-RNLGMWNSMLIACAQHAH-------TEEVFKL 353
A R PI + +W ++L C H E+VF+L
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%)
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
D S ++ CA GK + F+ GF +D +GS MY CG++K A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 223 DEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE 282
DE+ + W+ ++ A G+ ++ LFK+ + + ++ +TFS V + + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
G Q+HG LK+ + K +++A +VF+E R++ WNS++
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
+ E+ +F +M G+ + T + + C+ LI G+ + +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 403 HYATMVDLLGRAGKLQEALDIIKAMP 428
T++D+ + G L A + + M
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMS 358
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 238/444 (53%), Gaps = 7/444 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE-AQEKSATTWSSVISSLAQ 141
+Q+H ++K + L+ YSK + +L+ F+E + +W+++IS Q
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQ 374
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A++ F +M +RP++ + + A ++ ++ HA VVKT ++ V
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTV 430
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ +D Y K G+++ A KVF + ++++V+WS M+ YA GE E A+K+F E +
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 262 SVNDFTFSSVIRVCGNSTL-LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
N+FTFSS++ VC + + G+Q HG +K+ D K G IE+A
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF ++L WNSM+ AQH + +F MK ++ + +TF+ + AC+H G
Sbjct: 551 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++G++YF +M +D I P +H + MVDL RAG+L++A+ +I+ MP ++W
Sbjct: 611 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 670
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L CR+H EL AA++I + S VLLSN K++ +R VK
Sbjct: 671 LAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 730
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH 523
KE G SWIE N+ ++F AGDRSH
Sbjct: 731 KEPGYSWIEVKNKTYSFLAGDRSH 754
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 6/372 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H IK V L++ Y K + F+E +E++ TW+++IS A+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N + + F +M + +P+ F +A+ A G G +H VVK G D + V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S +++Y KCG ++ AR +FD+ ++VV+W+ MI YA G D AL +F L +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+++ +F+SVI++C N L Q+H +K + KC + A R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 322 VFNE-APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F E + N+ W +M+ Q+ EE LF MK G+RPN T+ +L A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP--- 408
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+I + + ++K E + ++D + GK++EA + + + W A L
Sbjct: 409 VISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML 466
Query: 441 TGCRLHGDAELA 452
G G+ E A
Sbjct: 467 AGYAQTGETEAA 478
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 11/373 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G Q+H ++K+ L VS+ LIN Y K + F++ + KS TW+S+IS A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N L A+ F M ++ +R + F S IK CA L + +H VVK GF D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ ++ + Y KC + +A ++F E+ NVVSW+ MI + E A+ LF E +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 260 DLSVNDFTFSSVIRVCGNSTLLEL--GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+ N+FT+S ++ T L + ++H +KT+Y+ K G +E
Sbjct: 392 GVRPNEFTYSVIL------TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A++VF+ +++ W++ML AQ TE K+F + G++PN TF +L C+
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 378 H-GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
+ +G+Q+ G ++ + ++ + + G ++ A ++ K E W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSW 564
Query: 437 GAFLTGCRLHGDA 449
+ ++G HG A
Sbjct: 565 NSMISGYAQHGQA 577
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 4/282 (1%)
Query: 163 DDHIFPSAIKACAILGRCD--IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARK 220
D IF S +K A L CD G+ +H +K GF DV VG+S VD Y K K+ RK
Sbjct: 92 DCSIFSSVLKVSATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 221 VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
VFDEM ERNVV+W+ +I YA ++ L LF E N FTF++ + V +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIA 340
G Q+H + +K D KCG + A +F++ ++++ WNSM+
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 341 CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPG 400
A + E +F M+ +R + +F ++ C++ + +Q + YG
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 401 AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++ + + +AL + K + W A ++G
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Query: 217 NARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCG 276
NA +FD+ P R+ S+ ++ ++ G + A +LF + ++ FSSV++V
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 277 NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNS 336
GRQ+H C+K + K + +VF+E RN+ W +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 337 MLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYG 396
++ A+++ +EV LF RM+N G +PN TF L + G+ +G Q ++ G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 397 IEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
++ ++++L + G +++A + ++ + W + ++G +G
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMISGYAANG 274
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 251/455 (55%), Gaps = 10/455 (2%)
Query: 81 KGQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLP---VFSLQAFEEAQEK-SATTWSSV 135
K +QIHA I+ + S + HLI + P ++ + F + ++ + W+++
Sbjct: 32 KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTL 91
Query: 136 ISSLAQNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
I A+ A +R+M + + PD H +P IKA + +G++IH+ V+++G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
F ++V +S + +Y CG++ +A KVFD+MPE+++V+W+ +I +A G+ E AL L+
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 255 EALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
E + + + FT S++ C L LG+++H +K +CG
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 271
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV-GMRPNFITFLCLL 373
+E A +F+E +N W S+++ A + +E +LF M++ G+ P ITF+ +L
Sbjct: 272 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331
Query: 374 YACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
YACSH G++ +G +YF M+ +Y IEP +H+ MVDLL RAG++++A + IK+MP++P
Sbjct: 332 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 391
Query: 433 ESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXK- 491
+W L C +HGD++LA FA +I +L SG VLLSN K
Sbjct: 392 VVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQ 451
Query: 492 MLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
MLRD GVKK G S +E GNRVH F GD+SH ++
Sbjct: 452 MLRD-GVKKVPGHSLVEVGNRVHEFLMGDKSHPQS 485
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 241/480 (50%), Gaps = 41/480 (8%)
Query: 82 GQQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+ +HAHI+K + Q PL ++ L+N Y K +LQ F+E + W+SV+++L
Sbjct: 22 AKALHAHIVKLGIVQCCPL-ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALN 80
Query: 141 QNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
Q L + F + + +RPDD +F + +KACA LG D G+ +H + + + D
Sbjct: 81 QANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDE 140
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK----- 254
V SS VDMY KCG + +A+ VFD + +N +SW+ M+ YA G E AL+LF+
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 255 -----EAL----------LEDLSV------------NDFTFSSVIRVCGNSTLLELGRQI 287
AL LE SV + SS++ C N GRQ+
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
HGL + +D KC + AA +F+ R++ W S+++ AQH
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEPGAQHYAT 406
E+ L+D M + G++PN +TF+ L+YACSH G ++KG++ F + KDYGI P QHY
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRI---FELG 463
++DLLGR+G L EA ++I MP P E W A L+ C+ G ++ AD + F+L
Sbjct: 381 LLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLK 440
Query: 464 HVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
S+ +LLSN + L + V+K+ G S +E F AG+ SH
Sbjct: 441 DPST--YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSH 498
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 134/326 (41%), Gaps = 34/326 (10%)
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV 230
++ CA K++HA +VK G + ++ V++YGKCG +A +VFDEMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 231 VSWSGMICAYALLGEDENAL-KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
++W+ ++ A L L +DF FS++++ C N ++ GRQ+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
+ + Y KCG++ +A VF+ ++N W +M+ A+ EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 350 VFKLFDRM--KNV------------------------GMRPNFITFL------CLLYACS 377
+LF + KN+ MR + L ++ AC+
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
+ G+Q GL+ G + ++D+ + + A DI M S W
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS-WT 308
Query: 438 AFLTGCRLHGDAELAAFAADRIFELG 463
+ + G HG AE A D + G
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHG 334
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 223/447 (49%), Gaps = 4/447 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G QIH+ K+ S V I+ YSK F E ++ ++++I
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L++ F+++++ R S + + G + +IH + +K+ F V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +Y K EI++ARK+FDE PE+++ SW+ MI Y G E+A+ LF+E +
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S N T + ++ C L LG+ +H L T ++ KCG I A R
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F+ +N WN+M+ H +E +F M N G+ P +TFLC+LYACSH GL
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 382 IDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ +G + F ++ YG EP +HYA MVD+LGRAG LQ AL I+AM IEP SVW L
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR+H D LA ++++FEL + G +VLLSN + + R + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAK 527
G + IE G H F +GD+SH + K
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVK 683
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 5/372 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH + S L+ +++ Y K + + F+ EK W+++IS +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 142 NELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
NE+ +I+ FR +I ++ R D + A A L +G IH+ KTG +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + + +Y KCG+IK +F E + ++V+++ MI Y GE E +L LFKE +L
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ T S++ V G+ L L IHG CLK+++ K IE+A
Sbjct: 318 ARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
++F+E+P ++L WN+M+ Q+ TE+ LF M+ PN +T C+L AC+ G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ G+ L++ E ++ + + G + EA + M + E W +
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMI 493
Query: 441 TGCRLHGDAELA 452
+G LHG + A
Sbjct: 494 SGYGLHGQGQEA 505
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 152/373 (40%), Gaps = 10/373 (2%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q HA II ++ + L S ++ F Q ++ ++ + NE
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 144 LPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
P ++ F + +++P+ + AI A + G+ IH V G D ++ +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S+ V MY K +++ARKVFD MPE++ + W+ MI Y ++++F++ + E +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 263 -VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
++ T ++ L LG QIH L KT KCG I+ S
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F E ++ +N+M+ + TE LF + G R T + L+ H L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV--WGAF 439
I Y L ++ H + L KL E K P +S+ W A
Sbjct: 338 IYAIHGY-CLKSNF-----LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 440 LTGCRLHGDAELA 452
++G +G E A
Sbjct: 392 ISGYTQNGLTEDA 404
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 245/459 (53%), Gaps = 6/459 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G IH++ IK L+S VS+ LI+ Y++ + F+ + +W+S+I +
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDV 199
NE P AI F++M + I+PD S + LG +S+ F ++ G F D+
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+G++ V MY K G + +AR VF+ +P +V+SW+ +I YA G A++++ E
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 260 -DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+++ N T+ SV+ C + L G ++HG LK KCG +E
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +F + P N WN+++ H H E+ LF M + G++P+ ITF+ LL ACSH
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 379 GGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
GL+D+GQ F +M+ DYGI P +HY MVD+ GRAG+L+ AL IK+M ++P S+WG
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWG 624
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
A L+ CR+HG+ +L A++ +FE+ G +VLLSN + +G
Sbjct: 625 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKG 684
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
++K G S +E N+V F G+++H E+ R L+ +
Sbjct: 685 LRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 179/385 (46%), Gaps = 9/385 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +IH +K V+ LI+ YS+ + + F+E + +W+++IS Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHI-FPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ A+ + + +R D + S + AC G + G +IH++ +K G + ++F
Sbjct: 229 SGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + +D+Y + G +++ +KVFD M R+++SW+ +I AY L + A+ LF+E L
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS-YDXXXXXXXXXXXXXXKCGVIEAA 319
+ + T S+ + + R + G L+ + K G++++A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSH 378
VFN P ++ WN+++ AQ+ E ++++ M+ G + N T++ +L ACS
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G + +G + G + G+ ++ D+ G+ G+L++AL + +P W
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNT 522
Query: 439 FLTGCRLHGDAELAAFAADRIFELG 463
+ HG E A + + G
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEG 547
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 165/393 (41%), Gaps = 12/393 (3%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
+HA ++ S +S L+N Y + F+ Q + W+ +IS +
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 145 PSLAIEYFRQ-MIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
S I F M+ + PD FPS +KAC + G IH +K GF DV+V +
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
S + +Y + + NAR +FDEMP R++ SW+ MI Y G + AL L ++
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAM 245
Query: 264 NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVF 323
+ T S++ C + G IH +K + + G + +VF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 324 NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
+ +R+L WNS++ A + LF M+ ++P+ +T + L S G I
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 384 --KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ Q F L K + +E A +V + + G + A + +P S W ++
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVV-MYAKLGLVDSARAVFNWLPNTDVIS-WNTIIS 423
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLS 474
G +G A A + + E G +++ +S
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 9/265 (3%)
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL 242
K +HA +V + +V + + V++Y G + AR FD + R+V +W+ MI Y
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 243 LGEDENALKLFKEALLEDLSVNDF-TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
G ++ F +L D+ TF SV++ C T+++ G +IH L LK +
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC--RTVID-GNKIHCLALKFGFMWDVY 186
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
+ + A +F+E P+R++G WN+M+ Q + +E L + ++ +
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM- 245
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ +T + LL AC+ G ++G +G+E ++DL G+L++
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLH 446
+ M + S W + + L+
Sbjct: 303 KVFDRMYVRDLIS-WNSIIKAYELN 326
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 243/458 (53%), Gaps = 2/458 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G ++HA++IK S V + LI+ YSK L + +AF +K +W++VI+ AQ
Sbjct: 368 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 427
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A+E FR + + D+ I S ++A ++L I K IH +++ G +D +
Sbjct: 428 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVI 486
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ VD+YGKC + A +VF+ + ++VVSW+ MI + AL G + A++LF+ + L
Sbjct: 487 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 546
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S + ++ + + L GR+IH L+ + CG +++A
Sbjct: 547 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 606
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ + L + SM+ A H + +LFD+M++ + P+ I+FL LLYACSH GL
Sbjct: 607 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 666
Query: 382 IDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D+G+ + +M+ +Y +EP +HY +VD+LGRA + EA + +K M EPT VW A L
Sbjct: 667 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 726
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR H + E+ AA R+ EL + G VL+SN ++ G++K
Sbjct: 727 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEK 786
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGR 538
G SWIE +VH F A D+SH ++K ++ + R
Sbjct: 787 HPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTR 824
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 2/340 (0%)
Query: 82 GQQIHAHIIKSSLQSIPL-VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G++IHA ++KSS S L V + LI Y++ + + + TW+S+I
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 325
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN + A+E+F MI + D+ S I A L G +HA+V+K G+D ++
Sbjct: 326 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 385
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG++ +DMY KC + F M +++++SW+ +I YA AL+LF++ +
Sbjct: 386 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 445
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ +++ S++R + + ++IH L+ KC + A+
Sbjct: 446 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 504
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
RVF +++ W SM+ + A + + E +LF RM G+ + + LC+L A +
Sbjct: 505 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 564
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
++KG++ + G +VD+ G LQ A
Sbjct: 565 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 604
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+ F+E +++A W+++I + N P+ A+ + M ++ + FP+ +KACA L
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMI 237
G +H+ +VK G+ F+ ++ V MY K ++ AR++FD E+ + V W+ ++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 238 CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS-Y 296
+Y+ G+ L+LF+E + + N +T S + C + +LG++IH LK+S +
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
+CG + A R+ + ++ WNS++ Q+ +E + F
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
M G + + ++ ++ A + G + + +G + Q T++D+ +
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 396
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 178/386 (46%), Gaps = 8/386 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK-SATTWSSVISSLA 140
G ++H+ ++K S + + L++ Y+K + + F+ QEK A W+S++SS +
Sbjct: 164 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 223
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDV 199
+ +E FR+M + P+ + SA+ AC +GK IHA V+K+ ++
Sbjct: 224 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 283
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+V ++ + MY +CG++ A ++ +M +VV+W+ +I Y + AL+ F + +
Sbjct: 284 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 343
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
++ + +S+I G + L G ++H +K +D KC +
Sbjct: 344 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 403
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS-- 377
R F ++L W +++ AQ+ E +LF + M + + +L A S
Sbjct: 404 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 463
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
LI K + + +++ ++ Q+ +VD+ G+ + A + +++ + S W
Sbjct: 464 KSMLIVK-EIHCHILRKGLLDTVIQN--ELVDVYGKCRNMGYATRVFESIKGKDVVS-WT 519
Query: 438 AFLTGCRLHGDAELAAFAADRIFELG 463
+ ++ L+G+ A R+ E G
Sbjct: 520 SMISSSALNGNESEAVELFRRMVETG 545
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 223/444 (50%), Gaps = 3/444 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +HA + K +QS + L+ YSK + F+ +EK W S+IS L +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 142 NELPSLAIEYFRQMIIDN--IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N A++ F M D+ ++PD I S ACA L G +H ++KTG ++V
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FVGSS +D+Y KCG + A KVF M N+V+W+ MI Y+ E ++ LF L +
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ 571
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + + +SV+ ++ L G+ +HG L+ KCG + A
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+F + ++L WN M+ H LFD MK G P+ +TFL L+ AC+H
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Query: 380 GLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G +++G+ F MK DYGIEP +HYA MVDLLGRAG L+EA IKAMPIE S+W
Sbjct: 692 GFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLC 751
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L+ R H + EL +A+++ + V L N +++++G+
Sbjct: 752 LLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Query: 499 KKETGLSWIEEGNRVHTFAAGDRS 522
K+ G SWIE +R + F +G S
Sbjct: 812 HKQPGCSWIEVSDRTNVFFSGGSS 835
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 175/384 (45%), Gaps = 3/384 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH ++K L + P V L++ YSK + + F +K W++++++ A+
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A++ F M ++ PD + I C++LG + GKS+HA + K +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
S+ + +Y KCG +A VF M E+++V+W +I G+ + ALK+F + +D
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 262 SV--NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
S+ + +SV C L G Q+HG +KT KCG+ E A
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+VF N+ WNSM+ +++ E LF+ M + G+ P+ ++ +L A S
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ KG+ G GI ++D+ + G + A +I K M + W
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLITWNLM 649
Query: 440 LTGCRLHGDAELAAFAADRIFELG 463
+ G HGD A D + + G
Sbjct: 650 IYGYGSHGDCITALSLFDEMKKAG 673
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 11/371 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFE-------EAQEKSATTWSS 134
G+ IH ++ + P ++ L+N Y K +++Q F+ + T W+S
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 135 VISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG--RCDIGKSIHAFVVK 192
+I + + FR+M++ +RPD + G R + GK IH F+++
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 193 TGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALK 251
D D F+ ++ +DMY K G +A +VF E+ ++ NVV W+ MI + G E++L
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
L+ A + + +F+ + C S GRQIH +K
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
KCG++ A VF+ + L +WN+M+ A A++ + LF M+ + P+ T
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 372 LLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
++ CS GL + G+ + I+ + + ++ L + G +A + K+M E
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EK 437
Query: 432 TESVWGAFLTG 442
WG+ ++G
Sbjct: 438 DMVAWGSLISG 448
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 3/353 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKS-ATTWSSVISSL 139
+G+QIH ++++SL + + LI+ Y K L + + + F E ++KS W+ +I
Sbjct: 188 EGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF 247
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ + +++ + ++++ F A+ AC+ G+ IH VVK G D
Sbjct: 248 GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDP 307
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+V +S + MY KCG + A VF + ++ + W+ M+ AYA +AL LF +
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + FT S+VI C L G+ +H K KCG A
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK--NVGMRPNFITFLCLLYACS 377
VF +++ W S++ ++ +E K+F MK + ++P+ + AC+
Sbjct: 428 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE 430
+ G Q G M G+ ++++DL + G + AL + +M E
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 11/286 (3%)
Query: 167 FPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
FPS +KAC+ L GK+IH VV G+ D F+ +S V+MY KCG + A +VFD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 227 E-------RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRV-CGNS 278
+ R+V W+ MI Y + + F+ L+ + + F+ S V+ V C
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 279 TL-LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNS 336
E G+QIHG L+ S D K G+ A RVF E + N+ +WN
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 337 MLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYG 396
M++ E L+ KN ++ +F L ACS G+Q + G
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 397 IEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+ +++ + + G + EA + + ++ +W A +
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAA 347
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+ +H + ++ + S + + LI+ Y K ++ F++ Q KS TW+ +I
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT-GFDVDV 199
+ A+ F +M PDD F S I AC G + GK+I F+ + G + ++
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP 226
++ VD+ G+ G ++ A MP
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMP 741
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 266 FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN- 324
FTF S+++ C T L G+ IHG + + KCG ++ A +VF+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 325 ------EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN-FITFLCLLYACS 377
R++ +WNSM+ + +E F RM G+RP+ F + + C
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 378 HGGL-IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
G ++G+Q G M ++ + ++D+ + G +A + + + +W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 437 GAFLTG 442
+ G
Sbjct: 241 NVMIVG 246
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 243/478 (50%), Gaps = 23/478 (4%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G QI+ IKSSL V++ I+ Y K Q + + F+E + + A +W+++I++
Sbjct: 358 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 417
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN + F M+ I PD+ F S +KAC G G IH+ +VK+G +
Sbjct: 418 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 476
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPER-NV-------------------VSWSGMICAY 240
VG S +DMY KCG I+ A K+ +R NV VSW+ +I Y
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXX 300
+ + E+A LF + ++ + FT+++V+ C N LG+QIH +K
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 596
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
KCG + + +F ++ R+ WN+M+ A H EE +LF+RM
Sbjct: 597 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQE 419
++PN +TF+ +L AC+H GLIDKG +YF +MK DYG++P HY+ MVD+LG++GK++
Sbjct: 657 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 716
Query: 420 ALDIIKAMPIEPTESVWGAFLTGCRLH-GDAELAAFAADRIFELGHVSSGMNVLLSNXXX 478
AL++I+ MP E + +W L C +H + E+A A + L S LLSN
Sbjct: 717 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 776
Query: 479 XXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
+ +R +KKE G SW+E + +H F GD++H + + E+G I
Sbjct: 777 DAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 834
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 1/342 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G QIH +++ + + + L++ Y+K + V SL+ F+ EK++ +WS++I+ Q
Sbjct: 157 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 216
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L SLA+++F++M N I+ S +++CA L +G +HA +K+ F D V
Sbjct: 217 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 276
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++T+DMY KC +++A+ +FD N S++ MI Y+ AL LF + L
Sbjct: 277 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
++ + S V R C L G QI+GL +K+S KC + A R
Sbjct: 337 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 396
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+E R+ WN+++ A Q+ E LF M + P+ TF +L AC+ GG
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGS 455
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
+ G + + G+ + +++D+ + G ++EA I
Sbjct: 456 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 1/344 (0%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+IN YSK+ + F + +W+S++S QN +IE F M + I D
Sbjct: 78 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 137
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
F +K C+ L +G IH VV+ G D DV S+ +DMY K + +VF
Sbjct: 138 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
+PE+N VSWS +I ALK FKE + V+ ++SV+R C + L L
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 284 GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
G Q+H LK+ + KC ++ A +F+ + N +N+M+ +Q
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 344 HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQH 403
H + LF R+ + G+ + I+ + AC+ + +G Q +GL +
Sbjct: 318 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 377
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+D+ G+ L EA + M S W A + +G
Sbjct: 378 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 420
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 174 CAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP------- 226
CA G ++GK HA ++ +GF FV + + +Y + +A VFD+MP
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 227 ------------------------ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
R+VVSW+ M+ Y GE ++++F + E +
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ TF+ +++VC LG QIHG+ ++ D K + RV
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F P +N W++++ C Q+ K F M+ V + + +L +C+ +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 383 DKGQQY--FGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
G Q L D+ + G AT+ D+ + +Q+A
Sbjct: 256 RLGGQLHAHALKSDFAAD-GIVRTATL-DMYAKCDNMQDA 293
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 247/488 (50%), Gaps = 36/488 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQ +H +KS++ S V++ LI+ Y + + F +EK +W+S+I+ Q
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
P A+E F++M ++++ + ACA + + G+ + +++ + +V++ +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 202 GSSTVDMYGKCGEIKNARKVFD-------------------------------EMPERNV 230
++ +DMY KCG I++A+++FD MP++++
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLE-DLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
V+W+ +I AY G+ AL +F E L+ ++ +N T S + C LELGR IH
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
K KCG +E + VFN R++ +W++M+ A H E
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMV 408
+F +M+ ++PN +TF + ACSH GL+D+ + F M+ +YGI P +HYA +V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSG 468
D+LGR+G L++A+ I+AMPI P+ SVWGA L C++H + LA A R+ EL + G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 469 MNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH---EK 525
+VLLSN K +R G+KKE G S IE +H F +GD +H EK
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 629
Query: 526 AKRNLSEI 533
L E+
Sbjct: 630 VYGKLHEV 637
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 195/450 (43%), Gaps = 47/450 (10%)
Query: 33 KPQQTPLNQPVFEQNYKPPQNLNQFSFEEKYRHICEXXXXXXXXXXXXKGQQIHAHIIKS 92
+P P P F +P N E+ RHI + +Q H H+I++
Sbjct: 8 QPLSLP-RHPNFSNPNQPTTN------NERSRHI----SLIERCVSLRQLKQTHGHMIRT 56
Query: 93 SLQSIPLVSHHLINFYSKTQLPV--FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIE 150
S P + L + + ++ + F+E + ++ W+++I + A P L+I
Sbjct: 57 GTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIW 116
Query: 151 YFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMY 209
F M+ ++ P+ + FP IKA A + +G+S+H VK+ DVFV +S + Y
Sbjct: 117 AFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY 176
Query: 210 GKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFS 269
CG++ +A KVF + E++VVSW+ MI + G + AL+LFK+ ED+ + T
Sbjct: 177 FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMV 236
Query: 270 SVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVF------ 323
V+ C LE GRQ+ + + KCG IE A R+F
Sbjct: 237 GVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
Query: 324 -------------------------NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK 358
N P +++ WN+++ A Q+ E +F ++
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 359 -NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
M+ N IT + L AC+ G ++ G+ +K +GI + ++ + + G L
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 418 QEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+++ ++ ++ VW A + G +HG
Sbjct: 417 EKSREVFNSVEKRDV-FVWSAMIGGLAMHG 445
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDM--YGKCGEIKNARKVFDEMPERNVVSWSGMICAYA 241
K H +++TG D + S M ++ ARKVFDE+P+ N +W+ +I AYA
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 242 LLGEDENALKLFKEALLEDLSV-NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXX 300
+ ++ F + + E N +TF +I+ + L LG+ +HG+ +K++
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
CG +++A +VF +++ WNSM+ Q ++ +LF +M++
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
++ + +T + +L AC+ ++ G+Q +++ + M+D+ + G +++A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 421 LDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ AM E W L G + D E A
Sbjct: 287 KRLFDAME-EKDNVTWTTMLDGYAISEDYEAA 317
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 233/441 (52%), Gaps = 5/441 (1%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV---FSLQAFEEAQEKSATTWSSVISSLA 140
QI A+ IKS ++ + V+ LINF +++ ++ FE E ++S+ +
Sbjct: 47 QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P F +++ D I PD++ FPS +KACA+ + G+ +H +K G D +V+
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + ++MY +C ++ +AR VFD + E VV ++ MI YA AL LF+E +
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
L N+ T SV+ C L+LG+ IH K S+ KCG ++ A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F + ++ W++M++A A H E+ +F+RM++ ++P+ ITFL LL ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+++G++YF M +GI P +HY +MVDLL RAG L++A + I +PI PT +W
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L C H + +LA ++RIFEL G V+LSN K+++DR
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 500 KETGLSWIEEGNRVHTFAAGD 520
K G S IE N VH F +GD
Sbjct: 466 KVPGCSSIEVNNVVHEFFSGD 486
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 140/284 (49%), Gaps = 9/284 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q+H +K L V LIN Y++ + + F+ E ++++I+ A
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P+ A+ FR+M ++P++ S + +CA+LG D+GK IH + K F V
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ +DM+ KCG + +A +F++M ++ +WS MI AYA G+ E ++ +F+ E+
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHG-LCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ ++ TF ++ C ++ +E GR+ + K + G +E A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 320 SRVFNEAPIRNLGM-WNSMLIACAQHAH-------TEEVFKLFD 355
++ PI M W +L AC+ H + +E +F+L D
Sbjct: 387 YEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD 430
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 233/449 (51%), Gaps = 5/449 (1%)
Query: 83 QQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
++IHA ++++ + L++ L N + ++ Q F+E + W+++ +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDM-CYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+LP ++ +++M +RPD+ +P +KA + LG G ++HA VVK GF V
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ V MY K GE+ +A +F+ M +++V+W+ + G AL+ F + + +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ FT S++ CG LE+G +I+ K D KCG EAA
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F E RN+ W++M++ A + + E LF M+N G+RPN++TFL +L ACSH GL
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 382 IDKGQQYFGLM---KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
+++G++YF LM D +EP +HYA MVDLLGR+G L+EA + IK MP+EP +WGA
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C +H D L AD + E +VLLSN +R G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
KK S +E ++H F GD+SH ++K
Sbjct: 447 KKVAAYSSVEFEGKIHFFNRGDKSHPQSK 475
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 134/267 (50%), Gaps = 4/267 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +HAH++K + +V+ L+ Y K + FE Q K W++ ++ Q
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
++A+EYF +M D ++ D S + AC LG +IG+ I+ K D ++ V
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +DM+ KCG + AR +F+EM +RNVVSWS MI YA+ G+ AL LF E L
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL 307
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT---SYDXXXXXXXXXXXXXXKCGVIEA 318
N TF V+ C ++ L+ G++ L +++ + + + G++E
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEE 367
Query: 319 ASRVFNEAPIR-NLGMWNSMLIACAQH 344
A + P+ + G+W ++L ACA H
Sbjct: 368 AYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 236/445 (53%), Gaps = 9/445 (2%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
++H HI+ + P ++ LI YS ++ + F++ ++++ W+++ +L
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI-----GKSIHAFVVKTGFDVD 198
+ + +M + D + +KAC + C + GK IHA + + G+
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKAC-VASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
V++ ++ VDMY + G + A VF MP RNVVSWS MI YA G+ AL+ F+E +
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 259 E--DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
E D S N T SV++ C + LE G+ IHG L+ D +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
E RVF+ R++ WNS++ + H + ++ ++F+ M G P +TF+ +L AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 377 SHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
SH GL+++G++ F M +D+GI+P +HYA MVDLLGRA +L EA +++ M EP V
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
WG+ L CR+HG+ ELA A+ R+F L ++G VLL++ K+L
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGD 520
RG++K G W+E ++++F + D
Sbjct: 517 RGLQKLPGRCWMEVRRKMYSFVSVD 541
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG++IHAH+ + S + L++ Y++ ++ F ++ +WS++I+ A
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 141 QNELPSLAIEYFRQMI--IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
+N A+ FR+M+ + P+ S ++ACA L + GK IH ++++ G D
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ V S+ V MYG+CG+++ ++VFD M +R+VVSW+ +I +Y + G + A+++F+E L
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
S TF SV+ C + L+E G+++
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 11/306 (3%)
Query: 162 PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKV 221
P + I C +H ++ G D D F+ + + MY G + ARKV
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 222 FDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL- 280
FD+ +R + W+ + A L G E L L+ + + + FT++ V++ C S
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 281 ---LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSM 337
L G++IH + Y + G ++ AS VF P+RN+ W++M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 338 LIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDY 395
+ A++ E + F M + PN +T + +L AC+ +++G+ G +
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 396 GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFA 455
G++ + +V + GR GKL+ + M S W + ++ +HG +
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVS-WNSLISSYGVHGYGK----K 369
Query: 456 ADRIFE 461
A +IFE
Sbjct: 370 AIQIFE 375
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 249/482 (51%), Gaps = 10/482 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q H QS VS LI YS + + F+E +++ +W+S+I
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIF------PSAIKACAILGRCDIGKSIHAFVVKTGF 195
N A+ F+ +++D DD +F S I AC+ + + +SIH+FV+K GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 196 DVDVFVGSSTVDMYGKCGE--IKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF 253
D V VG++ +D Y K GE + ARK+FD++ +++ VS++ ++ YA G A ++F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 254 KEALLEDL-SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
+ + + + N T S+V+ +S L +G+ IH ++ + K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
CG +E A + F+ +N+ W +M+ H H + +LF M + G+RPN+ITF+ +
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 373 LYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
L ACSH GL +G ++F MK +G+EPG +HY MVDLLGRAG LQ+A D+I+ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 432 TESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXK 491
+W + L CR+H + ELA + R+FEL + G +LLS+
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 492 MLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGRXYGESWFMWQIQV 551
++++RG+ K G S +E VH F GD H + ++ + + R E+ ++
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574
Query: 552 LC 553
+C
Sbjct: 575 VC 576
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 163/331 (49%), Gaps = 10/331 (3%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
+W+SVI+ LA++ + A+ F M ++ P FP AIKAC+ L GK H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENAL 250
G+ D+FV S+ + MY CG++++ARKVFDE+P+RN+VSW+ MI Y L G +A+
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 251 KLFKEALLEDLSVNDFTF------SSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXX 304
LFK+ L+++ +D F SVI C L IH +K +D
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGN 222
Query: 305 XXXXXXXKCGV--IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVG 361
K G + A ++F++ ++ +NS++ AQ + E F++F R+ KN
Sbjct: 223 TLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV 282
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ N IT +L A SH G + G+ + G+E +++D+ + G+++ A
Sbjct: 283 VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
M + S W A + G +HG A A
Sbjct: 343 KAFDRMKNKNVRS-WTAMIAGYGMHGHAAKA 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 11/212 (5%)
Query: 214 EIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI 272
E +N +F+ ++ +V SW+ +I A G+ AL F L +F I
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 273 RVCGNSTLLEL--GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
+ C S+L ++ G+Q H Y CG +E A +VF+E P RN
Sbjct: 84 KAC--SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRM------KNVGMRPNFITFLCLLYACSHGGLIDK 384
+ W SM+ + + + LF + + M + + + ++ ACS
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
+ + G + G T++D + G+
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 221/431 (51%), Gaps = 2/431 (0%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID 158
+ S+ LIN Y + V + + F+E ++ TTW+++I+ L Q E + FR+M
Sbjct: 26 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 85
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
PD++ S A L IG+ IH + +K G ++D+ V SS MY + G++++
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 219 RKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNS 278
V MP RN+V+W+ +I A G E L L+K + N TF +V+ C +
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
+ G+QIH +K KCG + A++ F+E + MW+SM+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265
Query: 339 IACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYG 396
A H +E +LF+ M + M N + FL LLYACSH GL DKG + F +M + YG
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 397 IEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAA 456
+PG +HY +VDLLGRAG L +A II++MPI+ +W L+ C +H +AE+A
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Query: 457 DRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTF 516
I ++ S VLL+N K +RD+ VKKE G+SW E VH F
Sbjct: 386 KEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 445
Query: 517 AAGDRSHEKAK 527
GDRS K+K
Sbjct: 446 KMGDRSQSKSK 456
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQIH + IK L+ +V+ L + Y + ++ W+++I AQ
Sbjct: 110 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 169
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N P + ++ M I RP+ F + + +C+ L G+ IHA +K G V V
Sbjct: 170 NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAV 229
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE-ALLED 260
SS + MY KCG + +A K F E + + V WS MI AY G+ + A++LF A +
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN 289
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL-KTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ +N+ F +++ C +S L + G ++ + + K + + G ++ A
Sbjct: 290 MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 349
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLF 354
+ PI+ ++ +W ++L AC H + E ++F
Sbjct: 350 EAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 3/183 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+GQQIHA IK S+ V LI+ YSK + +AF E +++ WSS+IS+
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 141 QNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV-KTGFDVD 198
+ AIE F M N+ ++ F + + AC+ G D G + +V K GF
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEAL 257
+ + VD+ G+ G + A + MP + ++V W ++ A + E A ++FKE L
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Query: 258 LED 260
D
Sbjct: 390 QID 392
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 237/455 (52%), Gaps = 1/455 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ IHA I S V + LI Y K V F+ ++ T ++VIS L +N
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
EL + F M + P+ + SA+ AC+ R G+ IHA + K G + ++ +
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S+ +DMY KCG I++A +F+ E + VS + ++ A G +E A++ F L +
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
++ S+V+ V L LG+Q+H L +K + KCG + + V
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F P RN WNSM+ A A+H H KL++ M + ++P +TFL LL+ACSH GLI
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474
Query: 383 DKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
DKG++ MK+ +GIEP +HY ++D+LGRAG L+EA I ++P++P +W A L
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
C HGD E+ +AA+++F+ SS ++L++N K ++ GV KE
Sbjct: 535 ACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKE 594
Query: 502 TGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
TG+S IE ++ H+F D+ H +A+ + G+
Sbjct: 595 TGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 14/276 (5%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+GQQIHA + K ++S + L++ YSK + FE E + + ++ LA
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN AI++F +M+ + D ++ + + I +GK +H+ V+K F + F
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + ++MY KCG++ +++ VF MP+RN VSW+ MI A+A G ALKL++E +
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGR-------QIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
+ D TF S++ C + L++ GR ++HG+ +T + +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH------YTCIIDMLGRA 507
Query: 314 GVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
G+++ A + P++ + +W ++L AC+ H TE
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 182 IGKSIHAFVVKTG-----FDVDV-----FVGSSTVDMYGKCGEIKNARKVFDEMPERNVV 231
+G +HA ++K D D+ V +S + +Y KCG++ +A K+FDEMP R+V+
Sbjct: 63 LGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVI 122
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
S + + + E E+ L K +L + T + V+ VC + + IH L
Sbjct: 123 SQNIVFYGFLRNRETESGFVLLKR-MLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVF 351
+ + YD KCG + VF+ RN+ +++ ++ E+
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGL 241
Query: 352 KLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLL 411
+LF M+ + PN +T+L L ACS I +GQQ L+ YGIE + ++D+
Sbjct: 242 RLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY 301
Query: 412 GRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+ G +++A I ++ E E L G +G E A R+ + G
Sbjct: 302 SKCGSIEDAWTIFES-TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 153/390 (39%), Gaps = 16/390 (4%)
Query: 82 GQQIHAHIIKSSLQSIPL----------VSHHLINFYSKTQLPVFSLQAFEEAQEKSATT 131
G +HA IIK+ P+ V + L++ Y+K V +++ F+E + +
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 132 WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV 191
+ V +N ++M+ D + C C + K IHA +
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAI 182
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK 251
+G+D ++ VG+ + Y KCG + R VFD M RNV++ + +I E+ L+
Sbjct: 183 LSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLR 242
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
LF + N T+ S + C S + G+QIH L K +
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
KCG IE A +F + +L+ AQ+ EE + F RM G+ +
Sbjct: 303 KCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
Query: 372 LLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
+L + G+Q L+ ++++ + G L ++ + + MP
Sbjct: 363 VLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Query: 432 TESVWGAFLTGCRLHGDAELAAFAADRIFE 461
S W + + HG AA +++E
Sbjct: 423 YVS-WNSMIAAFARHGH----GLAALKLYE 447
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 239/455 (52%), Gaps = 6/455 (1%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
+H ++KS + L+ Y + V + + F+E E+ +W+S+IS +
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 145 PSLAIEYFRQMIIDNI--RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
E +M+I + RP++ F S I AC G + G+ IH V+K G +V V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
++ ++ YGK G++ ++ K+F+++ +N+VSW+ MI + G E L F +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ TF +V+R C + ++ L + IHGL + + K G +E +S V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F+E + W +ML A A H + K F+ M + G+ P+ +TF LL ACSH GL+
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 383 DKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
++G+ YF M K Y I+P HY+ MVDLLGR+G LQ+A +IK MP+EP+ VWGA L
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
CR++ D +L AA+R+FEL V+LSN +++ +G+ +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 502 TGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
+G S+IE GN++H F GD SH EK ++ L EI
Sbjct: 473 SGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 507
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 7/321 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IH ++K + V + IN+Y KT S + FE+ K+ +W+++I
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN L + YF PD F + +++C +G + + IH ++ GF +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ ++ +D+Y K G ++++ VF E+ + ++W+ M+ AYA G +A+K F+ +
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQ-IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+S + TF+ ++ C +S L+E G+ + + D + G+++ A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP--NFITFLCLLYAC 376
+ E P+ + G+W ++L AC + T+ K +R+ + R N++ L +Y+
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV-MLSNIYSA 450
Query: 377 SHGGLIDKGQQYFGLMKDYGI 397
S GL + LMK G+
Sbjct: 451 S--GLWKDASRIRNLMKQKGL 469
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 227/448 (50%), Gaps = 2/448 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIHAH+I++ L S + ++N Y K V + + F++ K + ++ Q
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A++ F ++ + + D +F +KACA L ++GK IHA V K G + +V V
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+ VD Y KC ++A + F E+ E N VSWS +I Y + + E A+K FK ++
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 262 SV-NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
S+ N FT++S+ + C +G Q+H +K S KCG ++ A+
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF ++ W + + A + + E +LF++M + GM+PN +TF+ +L ACSH G
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++G+ M + Y + P HY M+D+ R+G L EAL +K MP EP W F
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCF 562
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+GC H + EL A + + +L + VL N K++ +R +K
Sbjct: 563 LSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 500 KETGLSWIEEGNRVHTFAAGDRSHEKAK 527
KE SWI+E ++H F GD+ H + +
Sbjct: 623 KELSCSWIQEKGKIHRFIVGDKHHPQTQ 650
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 9/351 (2%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+E E +A + +++IS+ A+ + A+ F M+ +P ++ + +K+
Sbjct: 141 FDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRAL 200
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
D G+ IHA V++ G + + + V+MY KCG + A++VFD+M + V+ +G++ Y
Sbjct: 201 DFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXX 300
G +ALKLF + + E + + F FS V++ C + L LG+QIH K +
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEV 320
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFD--RMK 358
KC E+A R F E N W++++ Q + EE K F R K
Sbjct: 321 SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 380
Query: 359 NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQ 418
N + +F T+ + ACS + G Q + + ++ + + G L
Sbjct: 381 NASILNSF-TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 419 EALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
+A ++ ++M P W AF++G +G+A A R+FE VS GM
Sbjct: 440 DANEVFESMD-NPDIVAWTAFISGHAYYGNASEAL----RLFE-KMVSCGM 484
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 13/311 (4%)
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
SL+++ + A E+ ++M + + + +AC L G+ +H + +
Sbjct: 57 SLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENP 116
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
V + + + MY +C +++A K+FDEM E N VS + MI AYA G + A+ LF L
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIH------GLCLKTSYDXXXXXXXXXXXXXX 311
++++++ N L+ GRQIH GLC TS +
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIE------TGIVNMYV 230
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
KCG + A RVF++ ++ +++ Q + KLF + G+ + F
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 372 LLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
+L AC+ ++ G+Q + G+E +VD + + A + + EP
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EP 349
Query: 432 TESVWGAFLTG 442
+ W A ++G
Sbjct: 350 NDVSWSAIISG 360
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 232/446 (52%), Gaps = 8/446 (1%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
+H +K S +HL+ Y K + + + F+E E + +W+SVIS
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 145 PSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
P A+ F++M D + P+++ F S KAC+ L IGK+IHA + +G ++ V S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 204 STVDMYGKCGEIKNARKVFDEM--PERNVVSWSGMICAYALLGEDENALKLFK--EALLE 259
S VDMYGKC +++ AR+VFD M RNVVSW+ MI AYA A++LF+ A L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N F +SVI C + L+ G+ HGL + Y+ KCG + A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
++F ++ + SM++A A+H E KLFD M + PN++T L +L+ACSH
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 380 GLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI--EPTESVW 436
GL+++G +Y LM + YG+ P ++HY +VD+LGR G++ EA ++ K + + E +W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
GA L+ RLHG E+ + A+ R+ + + + LSN ++
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 497 GVKKETGLSWIEEGNRVHTFAAGDRS 522
G KE SWIE + V+ F AGD S
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLS 496
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 33 KPQQT-PLNQPVFEQNYKPPQNLNQFSFEEKYRHICEXXXXXXXXXXXXKGQQIHAHIIK 91
KPQ + Q + E PP N+++F ++ C G+ IHA +
Sbjct: 110 KPQNALSMFQKMHEDRPVPP---NEYTFASVFK-ACSALAESRI------GKNIHARLEI 159
Query: 92 SSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE--AQEKSATTWSSVISSLAQNELPSLAI 149
S L+ +VS L++ Y K + + F+ ++ +W+S+I++ AQN AI
Sbjct: 160 SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 150 EYFRQM--IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
E FR + + R + + S I AC+ LGR GK H V + G++ + V +S +D
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
MY KCG + A K+F + +V+S++ MI A A G E A+KLF E + ++ N T
Sbjct: 280 MYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVT 339
Query: 268 FSSVIRVCGNSTLLELG 284
V+ C +S L+ G
Sbjct: 340 LLGVLHACSHSGLVNEG 356
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 235/448 (52%), Gaps = 5/448 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG QIH +K + + V + L++ YSK + + F ++S +W+++I+
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 141 QNELPSLAIEYFRQMIIDNI--RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV- 197
S A++ F M NI RPD+ S +KAC+ G GK IH F+V++GF
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 198 -DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
+ S VD+Y KCG + +ARK FD++ E+ ++SWS +I YA GE A+ LFK
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
+ ++ F SS+I V + LL G+Q+ L +K KCG++
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ A + F E ++++ W ++ +H ++ ++F M + P+ + +L +L AC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 377 SHGGLIDKGQQYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
SH G+I +G++ F L++ +GI+P +HYA +VDLLGRAG+L+EA +I MPI+P +
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W L+ CR+HGD EL + + + V++SN ++
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSH 523
+G+KKE G+SW+E VH F +G+ SH
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 191/375 (50%), Gaps = 13/375 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G Q+H +++KS + S++LI+ Y K + P+ + + F+ E++ +WS+++S
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N ++ F +M I P++ F + +KAC +L + G IH F +K GF++ V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+S VDMY KCG I A KVF + +R+++SW+ MI + G AL F ++++
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF--GMMQE 201
Query: 261 LSV----NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYD--XXXXXXXXXXXXXXKCG 314
++ ++FT +S+++ C ++ ++ G+QIHG +++ + KCG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
+ +A + F++ + + W+S+++ AQ E LF R++ + + + ++
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 375 ACSHGGLIDKGQQYFGLMKDY--GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
+ L+ +G+Q L G+E + ++VD+ + G + EA M ++
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 433 ESVWGAFLTGCRLHG 447
S W +TG HG
Sbjct: 380 IS-WTVVITGYGKHG 393
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 11/301 (3%)
Query: 169 SAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
S ++ C G D G +H +++K+G +++ + +DMY KC E A KVFD MPER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
NVVSWS ++ + L G+ + +L LF E + + N+FTFS+ ++ CG LE G QIH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
G CLK ++ KCG I A +VF R+L WN+M+ +
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 349 EVFKLFDRMK--NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIE--PGAQHY 404
+ F M+ N+ RP+ T LL ACS G+I G+Q G + G A
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 405 ATMVDLLGRAGKL---QEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
++VDL + G L ++A D IK E T W + + G G+ A R+ E
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 462 L 462
L
Sbjct: 307 L 307
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 236/465 (50%), Gaps = 20/465 (4%)
Query: 83 QQIHAHIIKSSLQSIP---LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
+Q+HA ++++ P + ++ S ++ + F+ + S+ W+++I +
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 140 AQN-ELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
A + A +R+M+ PD H FP +KACA + GK +H +VK GF
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DV+V + + +YG CG + ARKVFDEMPER++VSW+ MI A GE ++AL+LF+E +
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-M 243
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL-KTSYDXXXXXXXXXXXXXX--KCG 314
+ +T SV+ C L LG H L K D KCG
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCL 372
+ A +VF R+L WN+M++ A H EE FDRM K +RPN +TF+ L
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 373 LYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
L AC+H G ++KG+QYF +M +DY IEP +HY +VDL+ RAG + EA+D++ +MP++P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 432 TESVWGAFLTGCRLHG-DAELAAFAADRIFELGHVS-------SGMNVLLSNXXXXXXXX 483
+W + L C G EL+ A I + SG VLLS
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 484 XXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKR 528
K++ + G++KE G S IE H F AGD SH + K+
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 528
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 8/277 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q+H I+K V++ LI+ Y + + F+E E+S +W+S+I +L
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV-KTGFDV-- 197
+ A++ FR+M + PD + S + ACA LG +G HAF++ K DV
Sbjct: 229 RFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DV V +S ++MY KCG ++ A +VF M +R++ SW+ MI +A G E A+ F +
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 258 --LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKCG 314
E++ N TF ++ C + + GRQ + ++ + + G
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 315 VIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEV 350
I A + P++ + +W S+L AC + + E+
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 239/457 (52%), Gaps = 5/457 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-FSLQAFEEAQEKSATTWSSVISSLA 140
G +H ++K ++ V + ++N Y+ + + + F + + K+ TW+++I+
Sbjct: 130 GALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFT 189
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
++ ++QM+++N + A++A A + GK IHA V+K GF ++
Sbjct: 190 HLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLP 249
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S +D+Y +CG + A+ F EM ++++++W+ +I E AL +F+ +
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQG 308
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
N +TF+S++ C N L G+Q+HG + ++ KCG I +
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 321 RVFNE-APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RVF E RNL W SM+I H + E +LFD+M + G+RP+ I F+ +L AC H
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 380 GLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL++KG +YF +M+ +YGI P Y +VDLLGRAGK+ EA ++++ MP +P ES WGA
Sbjct: 429 GLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGA 488
Query: 439 FLTGCRLHG-DAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
L C+ H + ++ AA ++ EL G V+LS KM+R G
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMG 548
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIG 534
KKE G+SWI N+V +FA D+ A S +G
Sbjct: 549 NKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 173/372 (46%), Gaps = 7/372 (1%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID 158
+++ +LI Y + L + F+E ++ W+++I+ A + + A E F +M+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG-EIKN 217
P++ S +K+C + G +H VVK G + ++V ++ ++MY C ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 218 ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGN 277
A +F ++ +N V+W+ +I + LG+ LK++K+ LLE+ V + + +R +
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 278 STLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSM 337
+ G+QIH +K + +CG + A F+E ++L WN+
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT- 284
Query: 338 LIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGI 397
LI+ + + + E +F R ++ G PN TF L+ AC++ ++ GQQ G + G
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
+ ++D+ + G + ++ + + W + + G HG A D
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 458 RIFELGHVSSGM 469
++ VSSG+
Sbjct: 405 KM-----VSSGI 411
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 239/489 (48%), Gaps = 39/489 (7%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
IHA II++ V LI S ++ F + ++++I +
Sbjct: 94 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 153
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
+ + + +MI +++ PD+++ S +KAC + + + IHA V+K GF VG
Sbjct: 154 SADGVSLYHRMIHNSVLPDNYVITSVLKACDL----KVCREIHAQVLKLGFGSSRSVGLK 209
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG-------------------- 244
+++YGK GE+ NA+K+FDEMP+R+ V+ + MI Y+ G
Sbjct: 210 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 269
Query: 245 -----------EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK 293
E AL+LF+E +E++S N+FT V+ C + LELGR +H
Sbjct: 270 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 329
Query: 294 TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKL 353
+ +CG I A RVF +++ +N+M+ A H + E
Sbjct: 330 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 389
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLG 412
F M N G RPN +T + LL ACSHGGL+D G + F MK + +EP +HY +VDLLG
Sbjct: 390 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 449
Query: 413 RAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVL 472
R G+L+EA I+ +PIEP + G L+ C++HG+ EL A R+FE + SG VL
Sbjct: 450 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 509
Query: 473 LSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH---EKAKRN 529
LSN + +RD G++KE G S IE N++H F GD +H E +
Sbjct: 510 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQR 569
Query: 530 LSEIGGIGR 538
L E+ I R
Sbjct: 570 LQELNRILR 578
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 118/294 (40%), Gaps = 36/294 (12%)
Query: 185 SIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG 244
SIHA +++T D D FV + + + A VF + NV ++ MI + G
Sbjct: 93 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 152
Query: 245 EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY-------- 296
+ + L+ + + +++ +SV++ C L++ R+IH LK +
Sbjct: 153 RSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGL 208
Query: 297 -----------------------DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM 333
D +CG I+ A +F + I++
Sbjct: 209 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC 268
Query: 334 WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK 393
W +M+ ++ + +LF M+ + N T +C+L ACS G ++ G+ ++
Sbjct: 269 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 328
Query: 394 DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+ +E ++++ R G + EA + + M + S + ++G +HG
Sbjct: 329 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS-YNTMISGLAMHG 381
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H+ + ++ V + LIN YS+ + + F ++K +++++IS LA
Sbjct: 320 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAM 379
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ AI FR M+ RP+ + + AC+ G DIG + +K F+V+ +
Sbjct: 380 HGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN-SMKRVFNVEPQI 438
Query: 202 G--SSTVDMYGKCGEIKNARKVFDEMP 226
VD+ G+ G ++ A + + +P
Sbjct: 439 EHYGCIVDLLGRVGRLEEAYRFIENIP 465
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 233/478 (48%), Gaps = 32/478 (6%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G ++H K + P V ++ Y+ ++ F+E + TW+++I
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD-- 198
+ L A + F +M N+ PD+ I + + AC G ++I+ F+++ +D
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 199 -----------------------------VFVGSSTVDMYGKCGEIKNARKVFDEMPERN 229
+FV ++ V Y KCG + +A+ +FD+ +++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
+V W+ MI AY + AL++F+E + + + SVI C N +L+ + +H
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 368
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
+ KCG ++A VF + P RN+ W+SM+ A + H +
Sbjct: 369 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 428
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMV 408
LF RMK + PN +TF+ +LY CSH GL+++G++ F M D Y I P +HY MV
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSG 468
DL GRA L+EAL++I++MP+ +WG+ ++ CR+HG+ EL FAA RI EL G
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548
Query: 469 MNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
VL+SN +++ ++ V KE GLS I++ + H F GD+ H+++
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQS 606
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 179/413 (43%), Gaps = 47/413 (11%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFY------SKTQLPVFSLQAFEE-AQEKSATTWSSV 135
+Q+HAHI+++ +++H L +F S + ++L F + ++
Sbjct: 29 KQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPF 82
Query: 136 ISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF 195
+ L+++ P I +++++ R D F +KA + + G +H K
Sbjct: 83 LRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
D FV + +DMY CG I AR VFDEM R+VV+W+ MI Y G + A KLF+E
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL------------------------C 291
++ ++ +++ CG + + R I+ C
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 292 LKTSYD-------XXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQH 344
+ + + KCG ++ A +F++ ++L W +M+ A +
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
+ +E ++F+ M G++P+ ++ ++ AC++ G++DK + + G+E
Sbjct: 323 DYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSIN 382
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE--LAAFA 455
++++ + G L D+ + MP S W + + +HG+A L+ FA
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGEASDALSLFA 434
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 248/468 (52%), Gaps = 2/468 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+ +H ++ S L ++ + L++ Y K S + + + W+++I A
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-DIGKSIHAFVVKTGFDVDV 199
++E P A+ F+ M ++ + + S + AC + G + GK +HA++V GF+ D
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V +S + MY KCG++ +++ +F+ + RN+++W+ M+ A A G E LKL +
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 559
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+S++ F+FS + +LE G+Q+HGL +K ++ KCG I
Sbjct: 560 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
++ + R+L WN ++ A +H + EEV F M +G++P +TF+ LL ACSHG
Sbjct: 620 VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Query: 380 GLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL+DKG Y+ ++ +D+G+EP +H ++DLLGR+G+L EA I MP++P + VW +
Sbjct: 680 GLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRS 739
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C++HG+ + AA+ + +L + VL SN K + + +
Sbjct: 740 LLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNI 799
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGRXYGESWFM 546
KK+ SW++ ++V +F GDR+H + +++ I + ES ++
Sbjct: 800 KKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYV 847
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 184/387 (47%), Gaps = 10/387 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH ++K S+ V + L+ Y+ V + F++ K +W+S+++S
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+ MI + F SA+ AC + G+ +H VV +G + +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ V MYGK GE+ +R+V +MP R+VV+W+ +I YA + + AL F+ +E +
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 262 SVNDFTFSSVIRVC---GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
S N T SV+ C G+ LLE G+ +H + ++ KCG + +
Sbjct: 460 SSNYITVVSVLSACLLPGD--LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+ +FN RN+ WN+ML A A H H EEV KL +M++ G+ + +F L A +
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV--W 436
++++GQQ GL G E + + D+ + G++ E ++K +P S+ W
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSW 634
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELG 463
++ HG E + E+G
Sbjct: 635 NILISALGRHGYFEEVCATFHEMLEMG 661
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 177/381 (46%), Gaps = 3/381 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G Q+H + KS L S VS +++ Y L S + FEE +++ +W+S++ +
Sbjct: 77 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 136
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
P I+ ++ M + + +++ I +C +L +G+ I VVK+G + +
Sbjct: 137 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 196
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S + M G G + A +FD+M ER+ +SW+ + AYA G E + ++F
Sbjct: 197 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
VN T S+++ V G+ + GR IHGL +K +D G A+
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF + P ++L WNS++ + + + L M + G N++TF L AC
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+KG+ GL+ G+ +V + G+ G++ E+ ++ MP + W A +
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNALI 435
Query: 441 TGCRLHGDAE--LAAFAADRI 459
G D + LAAF R+
Sbjct: 436 GGYAEDEDPDKALAAFQTMRV 456
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 156/322 (48%), Gaps = 2/322 (0%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+ ++ +W++++S + + L +E+FR+M I+P + S + AC G
Sbjct: 15 FDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM 74
Query: 181 -DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICA 239
G +H FV K+G DV+V ++ + +YG G + +RKVF+EMP+RNVVSW+ ++
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 240 YALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXX 299
Y+ GE E + ++K E + N+ + S VI CG LGRQI G +K+ +
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
G ++ A+ +F++ R+ WNS+ A AQ+ H EE F++F M+
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
N T LL H G+ GL+ G + T++ + AG+ E
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 420 ALDIIKAMPIEPTESVWGAFLT 441
A + K MP + S W + +
Sbjct: 315 ANLVFKQMPTKDLIS-WNSLMA 335
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 10/258 (3%)
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
MY K G +K AR +FD MP RN VSW+ M+ +G ++ F++ + + F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 268 FSSVIRVCGNS-TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA 326
+S++ CG S ++ G Q+HG K+ G++ + +VF E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK-- 384
P RN+ W S+++ + EEV ++ M+ G+ N + ++ +C G L D+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC--GLLKDESL 178
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCR 444
G+Q G + G+E +++ +LG G + A I M T S W +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYA 237
Query: 445 LHGDAELAAFAADRIFEL 462
+G E + RIF L
Sbjct: 238 QNGHIE----ESFRIFSL 251
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 240/460 (52%), Gaps = 12/460 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q+H +K L LI+ YSK + + + F E S + +++I+ +
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD-V 199
QN L A+ F++M+ + P + F + ++AC +G H + K GF +
Sbjct: 607 QNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPE-RNVVSWSGMICAYALLGEDENALKLFKEALL 258
++G S + MY + A +F E+ +++V W+GM+ ++ G E ALK +KE
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+ + + TF +V+RVC + L GR IH L ++D KCG ++
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 319 ASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
+S+VF+E R N+ WNS++ A++ + E+ K+FD M+ + P+ ITFL +L ACS
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 378 HGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
H G + G++ F +M YGIE H A MVDLLGR G LQEA D I+A ++P +W
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
+ L CR+HGD +A+++ EL +S VLLSN K++RDR
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 497 GVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
GVKK G SWI+ R H FAAGD+SH SEIG I
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSH-------SEIGKI 998
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F E W+ +IS + ++AIEYF M +++ S + A I+
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
D+G +HA +K G +++VGSS V MY KC +++ A KVF+ + E+N V W+ MI Y
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXX 300
A GE ++LF + +++DFTF+S++ C S LE+G Q H + +K
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
KCG +E A ++F R+ WN+++ + Q + E F LF RM
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
G+ + L AC+H + +G+Q L G++ ++++D+ + G +++A
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 421 LDIIKAMP 428
+ ++P
Sbjct: 584 RKVFSSLP 591
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 6/374 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +HA IK L S V L++ YSK + + + FE +EK+ W+++I A
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N +E F M DD F S + CA ++G H+ ++K ++FV
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ VDMY KCG +++AR++F+ M +R+ V+W+ +I +Y + A LFK L +
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ +S ++ C + L G+Q+H L +K D KCG+I+ A +
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ P ++ N+++ +Q+ + EE LF M G+ P+ ITF ++ AC
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLG---RAGKLQEALDIIKAMPIEPTESVWGA 438
+ G Q+ G + G ++ + LLG + + EA + + + +W
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 702
Query: 439 FLTGCRLHGDAELA 452
++G +G E A
Sbjct: 703 MMSGHSQNGFYEEA 716
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 8/289 (2%)
Query: 182 IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA 241
IGK++H+ + G D + +G++ VD+Y KC ++ A K FD + E++V +W+ M+ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
+G+ L+ F + N FTFS V+ C T +E GRQIH +K +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
KC I A RVF N W + + EE +F+RM++ G
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
RP+ + F+ ++ G + + FG M P + M+ G+ G A+
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAI 312
Query: 422 DIIKAM---PIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 467
+ M ++ T S G+ L+ + + +L +LG S+
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 150/368 (40%), Gaps = 37/368 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H+ + + S + + +++ Y+K ++ + F+ EK T W+S++S +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSS 137
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
P + F + + I P+ F + CA + G+ IH ++K G + + +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G + VDMY KC I +AR+VF+ + + N V W+ + Y G E A+ +F+ E
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ F +VI +T + LG+ ++ A
Sbjct: 258 RPDHLAFVTVI-----NTYIRLGK------------------------------LKDARL 282
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F E ++ WN M+ + + F M+ ++ T +L A
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+D G G+ +++V + + K++ A + +A+ E + W A +
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIR 401
Query: 442 GCRLHGDA 449
G +G++
Sbjct: 402 GYAHNGES 409
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 244/464 (52%), Gaps = 7/464 (1%)
Query: 82 GQQIHAHIIKSSLQSIP-LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G++IH H ++S +++ +V +++ YSK ++ + F +++ W+ +I A
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 141 QNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+N + A F++M N ++PD + + A AIL G++IH + ++ GF +
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHM 365
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ ++ +DMYG+CG++K+A +FD M E+NV+SW+ +I AY G++ +AL+LF+E
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
L + T +S++ S L GR+IH +K+ Y CG +E A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+ FN ++++ WNS+++A A H LF M + PN TF LL ACS
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 380 GLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G++D+G +YF MK +YGI+PG +HY M+DL+GR G A ++ MP PT +WG+
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGS 605
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L R H D +A FAA++IF++ H ++G VLL N ++ +G+
Sbjct: 606 LLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGRXYGE 542
+ + S +E + H F GDRSH + + + R GE
Sbjct: 666 SRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGE 709
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 6/322 (1%)
Query: 108 YSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIF 167
++ ++L +LQ F+E + A W+ +I L A++++ +M+ ++ D +
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 168 PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE 227
P IK+ A + + GK IHA V+K GF DV+V +S + +Y K G +A KVF+EMPE
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
R++VSW+ MI Y LG+ ++L LFKE L + F+ S + C + ++G++I
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 288 HGLCLKTSYDX-XXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
H +++ + K G + A R+FN RN+ WN M+ A++
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 347 TEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
+ F F +M + G++P+ IT + LL A + I +G+ G G P
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLET 369
Query: 406 TMVDLLGRAGKLQEALDIIKAM 427
++D+ G G+L+ A I M
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRM 391
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 5/375 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IHA +IK S V + LI+ Y K + + FEE E+ +W+S+IS
Sbjct: 148 EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-DV 199
++ F++M+ +PD SA+ AC+ + +GK IH V++ + DV
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V +S +DMY K GE+ A ++F+ M +RN+V+W+ MI YA G +A F++ +
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ D S I + S +LE GR IHG ++ + +CG +++A
Sbjct: 328 NGLQPDVITS--INLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSA 384
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+F+ +N+ WNS++ A Q+ +LF + + + P+ T +L A +
Sbjct: 385 EVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAES 444
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ +G++ + ++V + G L++A + ++ S W +
Sbjct: 445 LSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS-WNSI 503
Query: 440 LTGCRLHGDAELAAF 454
+ +HG ++ +
Sbjct: 504 IMAYAVHGFGRISVW 518
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 166/368 (45%), Gaps = 30/368 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IH + ++ ++ LI+ Y + + F+ EK+ +W+S+I++
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN A+E F+++ ++ PD S + A A G+ IHA++VK+ + +
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +S V MY CG++++ARK F+ + ++VVSW+ +I AYA+ G ++ LF E +
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEA 318
++ N TF+S++ C S +++ G + + +K Y D + G A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 319 ASRVFNEAP-IRNLGMWNSMLIACAQHAH-------TEEVFKLFDRMKNVGMRPNFITFL 370
A R E P + +W S+L A H E++FK+ N G ++
Sbjct: 587 AKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM--EHDNTG------CYV 638
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIE----------PGAQHYATMVDLLGRA-GKLQE 419
LL + G + + LM+ GI G H T D A K+ E
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYE 698
Query: 420 ALDIIKAM 427
LD++ M
Sbjct: 699 VLDVVSRM 706
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 228/444 (51%), Gaps = 2/444 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQ+HA + + V + +++FYSK + + F+E E +++ VISS +Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ ++ +FR+M + F + + A L +G+ +H + D + V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+S VDMY KC + A +F +P+R VSW+ +I Y G LKLF + +L
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ TF++V++ + L LG+Q+H +++ KCG I+ A +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF E P RN WN+++ A A + E F +M G++P+ ++ L +L ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++G +YF M YGI P +HYA M+DLLGR G+ EA ++ MP EP E +W + L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 441 TGCRLHGDAELAAFAADRIFELGHV-SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
CR+H + LA AA+++F + + + V +SN K +R+RG+K
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH 523
K SW+E +++H F++ D++H
Sbjct: 689 KVPAYSWVEVNHKIHVFSSNDQTH 712
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 3/391 (0%)
Query: 84 QIHAHIIKSSLQSIPL--VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
Q+HA +K + P VS+ L+ Y + + + FEE EK + T++++I+ +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L + +I F +M +P D F +KA L +G+ +HA V TGF D V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+ +D Y K + R +FDEMPE + VS++ +I +Y+ + E +L F+E
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+F F++++ + N + L++GRQ+H L + D KC + E A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F P R W +++ Q KLF +M+ +R + TF +L A +
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ G+Q + G + +VD+ + G +++A+ + + MP S W A ++
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALIS 526
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVL 472
+GD E A A ++ E G +++L
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 7/327 (2%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN--IRPDDHIFPSAIKACAILG 178
F+ +++ TW+ ++ A+N A + FRQM + PD F + + C
Sbjct: 102 FDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAV 161
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN---ARKVFDEMPERNVVSWSG 235
+ +HAF VK GFD + F+ S V + C E++ A +F+E+PE++ V+++
Sbjct: 162 PQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC-EVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 236 MICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS 295
+I Y G ++ LF + +DFTFS V++ LG+Q+H L + T
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 296 YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFD 355
+ K + +F+E P + +N ++ + +Q E F
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 356 RMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAG 415
M+ +G F +L ++ + G+Q + ++VD+ +
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 416 KLQEALDIIKAMPIEPTESVWGAFLTG 442
+EA I K++P T S W A ++G
Sbjct: 401 MFEEAELIFKSLPQRTTVS-WTALISG 426
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 8/224 (3%)
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV--NDFTF 268
K G++ +AR +FD MP+R VV+W+ ++ YA + A KLF++ + TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 269 SSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV--IEAASRVFNEA 326
++++ C ++ Q+H +K +D C V ++ A +F E
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID--K 384
P ++ +N+++ + E LF +M+ G +P+ TF +L A GL D
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV--GLHDFAL 268
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
GQQ L G A ++D + ++ E + MP
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 224/440 (50%), Gaps = 5/440 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H+ + K L+ ++H LI Y+K ++ + F+E E+ +W+S+IS ++
Sbjct: 147 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 206
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A++ FR+M + PD+ S + AC+ LG G+ + + + F+
Sbjct: 207 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 266
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS + MYGKCG++ +AR+VF++M +++ V+W+ MI Y+ G+ A KLF E +
Sbjct: 267 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 326
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S + T S+V+ CG+ LELG+QI + S KCG +E A R
Sbjct: 327 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 386
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF P++N WN+M+ A A H +E LFDRM + P+ ITF+ +L AC H GL
Sbjct: 387 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 443
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ +G +YF M +G+ P +HY ++DLL RAG L EA + ++ P +P E + A L
Sbjct: 444 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 503
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMN-VLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
C D + A + E+ + N V+ SN ++RDRGV
Sbjct: 504 GACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 563
Query: 500 KETGLSWIEEGNRVHTFAAG 519
K G SWIE + F AG
Sbjct: 564 KTPGCSWIEIEGELMEFLAG 583
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 166/316 (52%), Gaps = 9/316 (2%)
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
A+ +R+M ++PD + ACA L +G+S+H+ + K G + DV + S +
Sbjct: 112 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 171
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
MY KCG++ ARK+FDE+ ER+ VSW+ MI Y+ G ++A+ LF++ E ++ T
Sbjct: 172 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 231
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
S++ C + L GR + + + KCG +++A RVFN+
Sbjct: 232 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 291
Query: 328 IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
++ W +M+ +Q+ + E FKLF M+ G+ P+ T +L AC G ++ G+Q
Sbjct: 292 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 351
Query: 388 YFGLMKDYGIEPGAQH---YAT-MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
++ + E QH AT +VD+ G+ G+++EAL + +AMP++ E+ W A +T
Sbjct: 352 ----IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITAY 406
Query: 444 RLHGDAELAAFAADRI 459
G A+ A DR+
Sbjct: 407 AHQGHAKEALLLFDRM 422
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 6/232 (2%)
Query: 213 GEIKNARKVFDEMPERNVVSWSGMICAYALLGED-ENALKLFKEALLEDLSVNDFTFSSV 271
G+ + +F E N S++ MI D E AL L++ L + FT++ V
Sbjct: 75 GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFV 134
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNL 331
C + +GR +H K + KCG + A ++F+E R+
Sbjct: 135 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDT 194
Query: 332 GMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ--QYF 389
WNSM+ ++ + ++ LF +M+ G P+ T + +L ACSH G + G+ +
Sbjct: 195 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 254
Query: 390 GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ K G+ + ++ + G+ G L A + M I+ W A +T
Sbjct: 255 AITKKIGLSTFLG--SKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMIT 303
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/462 (30%), Positives = 241/462 (52%), Gaps = 15/462 (3%)
Query: 82 GQQIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+++HA+ +K+ SL V L++ Y + + + F+ ++ W+++I+ +
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 141 QNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
QNE A+ F M + + + AC G ++IH FVVK G D D
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENAL--------- 250
FV ++ +DMY + G+I A ++F +M +R++V+W+ MI Y E+AL
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 251 --KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXX 308
K+ K A L N T +++ C + L G++IH +K +
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 309 XXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFIT 368
KCG ++ + +VF++ P +N+ WN +++A H + +E L M G++PN +T
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 369 FLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
F+ + ACSH G++D+G + F +MK DYG+EP + HYA +VDLLGRAG+++EA ++ M
Sbjct: 621 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Query: 428 PIEPTES-VWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXX 486
P + ++ W + L R+H + E+ AA + +L + VLL+N
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 740
Query: 487 XXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKR 528
+ ++++GV+KE G SWIE G+ VH F AGD SH ++++
Sbjct: 741 TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 21/387 (5%)
Query: 82 GQQIHAH-IIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+Q+HA+ + K L S + + L+ Y K S + TW++V+SSL
Sbjct: 221 GKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDV 199
QNE A+EY R+M+++ + PD+ S + AC+ L GK +HA+ +K G D +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF---KEA 256
FVGS+ VDMY C ++ + R+VFD M +R + W+ MI Y+ D+ AL LF +E+
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
L N T + V+ C S IHG +K D + G I
Sbjct: 399 --AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN-----------VGMRPN 365
+ A R+F + R+L WN+M+ H E+ L +M+N V ++PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
IT + +L +C+ + KG++ + + +VD+ + G LQ + +
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAELA 452
+P + W + +HG+ + A
Sbjct: 577 QIP-QKNVITWNVIIMAYGMHGNGQEA 602
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 10/368 (2%)
Query: 82 GQQIHAHIIK--SSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
G+QIHAH+ K + S+ V++ L+N Y K + F+ E++ +W+S+ISSL
Sbjct: 116 GKQIHAHVYKFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 174
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD---IGKSIHAFVVKTGFD 196
E +A+E FR M+ +N+ P S + AC+ L + +GK +HA+ ++ G +
Sbjct: 175 CSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-E 233
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
++ F+ ++ V MYGK G++ +++ + R++V+W+ ++ + + AL+ +E
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKCGV 315
+LE + ++FT SSV+ C + +L G+++H LK S D C
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLY 374
+ + RVF+ R +G+WN+M+ +Q+ H +E LF M ++ G+ N T ++
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
AC G + + G + G++ T++D+ R GK+ A+ I M +
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLV 472
Query: 435 VWGAFLTG 442
W +TG
Sbjct: 473 TWNTMITG 480
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 7/324 (2%)
Query: 124 AQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG 183
+Q +S W ++ S ++ L A+ + MI+ I+PD++ FP+ +KA A L ++G
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 184 KSIHAFVVKTGFDVD-VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL 242
K IHA V K G+ VD V V ++ V++Y KCG+ KVFD + ERN VSW+ +I +
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 243 LGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE---LGRQIHGLCLKTSYDXX 299
+ E AL+ F+ L E++ + FT SV+ C N + E +G+Q+H L+ +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELN 235
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
K G + ++ + R+L WN++L + Q+ E + M
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGL-MKDYGIEPGAQHYATMVDLLGRAGKLQ 418
G+ P+ T +L ACSH ++ G++ +K+ ++ + + +VD+ ++
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 419 EALDIIKAMPIEPTESVWGAFLTG 442
+ M + +W A + G
Sbjct: 356 SGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG++IHA+ IK++L + V L++ Y+K S + F++ +K+ TW+ +I +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ AI+ R M++ ++P++ F S AC+ G D G I +V+K + V+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPS 653
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMPE--RNVVSWSGMICA 239
+ VD+ G+ G IK A ++ + MP +WS ++ A
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 214/436 (49%), Gaps = 36/436 (8%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
E + +W+ ++S ++ A+ F+++ PD S + + ++G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP------------------- 226
IH +V+K G D V S+ +DMYGK G + +F++
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 227 ----------------ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
E NVVSW+ +I A G+D AL+LF+E + + N T S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
++ CGN L GR HG ++ KCG I + VFN P +N
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
L WNS++ + H +EV +F+ + ++P+FI+F LL AC GL D+G +YF
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 391 LM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+M ++YGI+P +HY+ MV+LLGRAGKLQEA D+IK MP EP VWGA L CRL +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 450 ELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEE 509
+LA AA+++F L + G VLLSN + G+KK G SWI+
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 510 GNRVHTFAAGDRSHEK 525
NRV+T AGD+SH +
Sbjct: 634 KNRVYTLLAGDKSHPQ 649
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 178/440 (40%), Gaps = 71/440 (16%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
K Q HA I+KS Q+ +S LI YS + + + + ++SS+I +L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ +L + +I F +M + PD H+ P+ K CA L +GK IH +G D+D F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V S MY +CG + +ARKVFD M +++VV+ S ++CAYA G E +++ E
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 261 LSVN-----------------------------------DFTFSSVIRVCGNSTLLELGR 285
+ N T SSV+ G+S +L +GR
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM------------ 333
IHG +K K G + +FN+ + G+
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 334 -----------------------WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
W S++ CAQ+ E +LF M+ G++PN +T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE 430
+L AC + + G+ G + + ++D+ + G++ + + MP +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 431 PTESVWGAFLTGCRLHGDAE 450
W + + G +HG A+
Sbjct: 453 -NLVCWNSLMNGFSMHGKAK 471
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFY----SKTQLPVFSLQAFE----EAQEKSATTWS 133
G+ H + I S ++ + N Y S+ L +L+ FE + E + +W+
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 134 SVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT 193
S+I+ AQN A+E FR+M + ++P+ PS + AC + G+S H F V+
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV 417
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF 253
+V VGS+ +DMY KCG I ++ VF+ MP +N+V W+ ++ +++ G+ + + +F
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 254 KEALLEDLSVNDFTFSSVIRVCGNSTLLELG 284
+ + L + +F+S++ CG L + G
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 220/446 (49%), Gaps = 2/446 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IHA++I + V + L Y + + F + K +W+++IS
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N LP AI+ +R M D+++PD+ + + ACA LG D G +H +K V V
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ ++MY KC I A +F +P +NV+SW+ +I L AL +F + L
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTL 494
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N T ++ + C L G++IH L+T +CG + A
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 554
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
FN +++ WN +L ++ V +LFDRM +RP+ ITF+ LL CS +
Sbjct: 555 QFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ +G YF M+DYG+ P +HYA +VDLLGRAG+LQEA I+ MP+ P +VWGA L
Sbjct: 614 VRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
CR+H +L +A IFEL S G +LL N +M+++ G+ +
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 502 TGLSWIEEGNRVHTFAAGDRSHEKAK 527
G SW+E +VH F + D+ H + K
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTK 759
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 152/329 (46%), Gaps = 6/329 (1%)
Query: 121 FEEAQEKSATTWSSVISSLA-QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGR 179
F + E++ +W+ ++ A Q Y R + + ++PD + FP ++ C +
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 180 CDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICA 239
GK +H VV+ G+++D+ V ++ + MY KCG++K+AR +FD MP R+++SW+ MI
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 240 YALLGEDENALKLFKEALLEDLSVND--FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYD 297
Y G L+LF + LSV+ T +SVI C LGR IH + T +
Sbjct: 272 YFENGMCHEGLELF--FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA 329
Query: 298 XXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM 357
G A ++F+ +++ W +M+ + ++ + M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
++P+ IT +L AC+ G +D G + L + ++++ + +
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 418 QEALDIIKAMPIEPTESVWGAFLTGCRLH 446
+ALDI +P + S W + + G RL+
Sbjct: 450 DKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 3/379 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+++H H+++ + V + LI Y K + F+ + +W+++IS
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+N + +E F M ++ PD S I AC +LG +G+ IHA+V+ TGF VD+
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S MY G + A K+F M +++VSW+ MI Y + A+ ++ +
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ++ T ++V+ C L+ G ++H L +K KC I+ A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F+ P +N+ W S++ + E +F R + ++PN IT L AC+ G
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIG 512
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ G++ + G+ ++D+ R G++ A + + T W L
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILL 570
Query: 441 TGCRLHGDAELAAFAADRI 459
TG G + DR+
Sbjct: 571 TGYSERGQGSMVVELFDRM 589
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 130/281 (46%), Gaps = 2/281 (0%)
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
D+ +F + ++ C + G +++ + + + V +G++ + M+ + G + +A VF
Sbjct: 93 DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 223 DEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-LEDLSVNDFTFSSVIRVCGNSTLL 281
+M ERN+ SW+ ++ YA G + A+ L+ L + + + +TF V+R CG L
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 282 ELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIAC 341
G+++H ++ Y+ KCG +++A +F+ P R++ WN+M+
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
++ E +LF M+ + + P+ +T ++ AC G G+ + G
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++ + AG +EA + M + S W ++G
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS-WTTMISG 372
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 243/481 (50%), Gaps = 41/481 (8%)
Query: 84 QIHAHIIKSSL---QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
QIHA I++ +L P+++ L Y+ SL F + + +++ I++ +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N L A + Q++ I P++ F S +K+C+ GK IH V+K G +D +
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPY 162
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPER-------------------------------N 229
V + VD+Y K G++ +A+KVFD MPER +
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVND-FTFSSVIRVCGNSTLLELGRQIH 288
+VSW+ MI YA G +AL LF++ L E D T + + C LE GR IH
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
+ KCG +E A VFN+ P +++ WN+M+ A H +++
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 349 EVFKLFDRMKNV-GMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYAT 406
+ +LF+ M+ + G++P ITF+ L AC+H GL+++G + F M ++YGI+P +HY
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
+V LLGRAG+L+ A + IK M ++ +W + L C+LHGD L A+ + L +
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 467 SGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
SG+ VLLSN +++++G+ KE G+S IE N+VH F AGDR H K+
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 527 K 527
K
Sbjct: 523 K 523
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 242/481 (50%), Gaps = 34/481 (7%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKT--------------QLPVFSLQA------ 120
+GQQIH H++K V LI+ Y + V S A
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 121 -----------FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
F+E K +W+++IS A+ A+E F+ M+ N+RPD+ +
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN 229
+ ACA G ++G+ +H ++ GF ++ + ++ +D+Y KCGE++ A +F+ +P ++
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
V+SW+ +I Y + + AL LF+E L + ND T S++ C + +++GR IH
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 290 LCLK--TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
K KCG IEAA +VFN ++L WN+M+ A H
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYAT 406
+ F LF RM+ +G++P+ ITF+ LL ACSH G++D G+ F M +DY + P +HY
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
M+DLLG +G +EA ++I M +EP +W + L C++HG+ EL A+ + ++ +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 467 SGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
G VLLSN +L D+G+KK G S IE + VH F GD+ H +
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 527 K 527
+
Sbjct: 632 R 632
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 194/416 (46%), Gaps = 39/416 (9%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQ----LPVFSLQAFEEAQEKSATTWSSVISSLA 140
IHA +IK L + LI F + LP +++ F+ QE + W+++ A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P A++ + MI + P+ + FP +K+CA G+ IH V+K G D+D++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 201 VGSSTVDMYGKCGE-------------------------------IKNARKVFDEMPERN 229
V +S + MY + G I+NA+K+FDE+P ++
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
VVSW+ MI YA G + AL+LFK+ + ++ ++ T +V+ C S +ELGRQ+H
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
+ KCG +E A +F P +++ WN+++ +E
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ--QYFGLMKDYGIEPGAQHYATM 407
LF M G PN +T L +L AC+H G ID G+ + + G+ + ++
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+D+ + G ++ A + ++ + + S W A + G +HG A+ + R+ ++G
Sbjct: 411 IDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 238/484 (49%), Gaps = 38/484 (7%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV--FSLQAFEEAQEKSATTWSSVISSLA 140
+QIH H+++ L + LI +K +P+ ++ + E Q ++ W++VI A
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
AI + M + I P F + +KAC + ++G+ HA + V+
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG++ +DMY KC I ARKVFDEMPER+V+SW+ +I AYA +G E A +LF+ +D
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 261 L-------------------------------SVNDFTFSSVIRVCGNSTLLELGRQIHG 289
+ ++ T + I C + +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 290 LCLKTSYDXXXXXX--XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
+ K+ Y KCG +E A VF +N+ ++SM++ A H
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 348 EEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYA 405
+E LF M ++PN +TF+ L ACSH GL+D+G+Q F M + +G++P HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHV 465
MVDLLGR G+LQEAL++IK M +EP VWGA L CR+H + E+A AA+ +FEL
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 466 SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGN-RVHTFAAGDRSHE 524
G +LLSN K+++++G+KK +SW+ + N ++H F G+ +H
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Query: 525 KAKR 528
+ +
Sbjct: 546 MSNK 549
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 125/303 (41%), Gaps = 36/303 (11%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS--- 138
G+Q HA + V + +I+ Y K + + + F+E E+ +W+ +I++
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 139 ----------------------------LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
AQN P A+EYF +M IR D+
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVD--VFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
I ACA LG K+G+ V +GS+ +DMY KCG ++ A VF M +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLE-DLSVNDFTFSSVIRVCGNSTLLELGRQI 287
NV ++S MI A G + AL LF + + ++ N TF + C +S L++ GRQ+
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 288 HGLCLKT-SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHA 345
+T + G ++ A + + + G+W ++L AC H
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 346 HTE 348
+ E
Sbjct: 468 NPE 470
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 237/463 (51%), Gaps = 9/463 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFS-----LQAFEEAQEKSATTWSSV 135
K ++IH+H+I + LQ P + +HL+ F + + S F+ + S + W+ +
Sbjct: 20 KLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD--SDPSTSDWNYL 77
Query: 136 ISSLAQNELPSLAIEYFRQMIIDNI-RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
I + + P +I ++ +M++ ++ RPD F A+K+C + IH V+++G
Sbjct: 78 IRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSG 137
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
F D V +S V Y G ++ A KVFDEMP R++VSW+ MIC ++ +G AL ++K
Sbjct: 138 FLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYK 197
Query: 255 EALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
E + + +T +++ C + + L +G +H + + KCG
Sbjct: 198 RMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCG 257
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
+E A VFN R++ WNSM+I H H E F +M G+RPN ITFL LL
Sbjct: 258 SLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLL 317
Query: 375 ACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
CSH GL+ +G ++F +M + + P +HY MVDL GRAG+L+ +L++I A
Sbjct: 318 GCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 434 SVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKML 493
+W L C++H + EL A ++ +L ++G VL+++ K++
Sbjct: 378 VLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLI 437
Query: 494 RDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
R ++ G SWIE G++VH F D+ H ++ SE+G +
Sbjct: 438 RSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 224/429 (52%), Gaps = 11/429 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H ++K+ + VS L++ Y + L+ FE+ + + W S+IS
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N S AIE FR+M + ++ ++ I + AC GRC F K GF+V +
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVAC---GRC----FDPYFQSKVGFNV--IL 236
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S +DMY KCG+++ AR +FD MPER +VSW+ +I Y+ G+ E AL +F + L +
Sbjct: 237 ATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGI 296
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ + TF SVIR +LG+ IH KT + K G E+A +
Sbjct: 297 APDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKK 356
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGG 380
F + ++ W ++I A H H E +F RM+ G P+ IT+L +LYACSH G
Sbjct: 357 AFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIG 416
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++GQ+YF M+D +G+EP +HY MVD+L RAG+ +EA ++K MP++P ++WGA
Sbjct: 417 LVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGAL 476
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L GC +H + EL + E + SG+ VLLSN + ++ + V
Sbjct: 477 LNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVD 536
Query: 500 KETGLSWIE 508
K G S +E
Sbjct: 537 KVLGHSSVE 545
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 178/390 (45%), Gaps = 19/390 (4%)
Query: 83 QQIHAHIIKSSL--QSIPLVSHHLINFYS---KTQLPVFSLQAFEEAQEKSATTWSSVIS 137
Q+H +IKSS+ IPL LI+F + +T ++ FE S W+S+I
Sbjct: 23 NQLHGLMIKSSVIRNVIPL--SRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIR 80
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+ + P A+ ++++M+ PD FP +KAC+ L G +H FVVKTGF+V
Sbjct: 81 GYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV 140
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
+++V + + MY CGE+ +VF+++P+ NVV+W +I + +A++ F+E
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQI-HGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
+ N+ ++ CG ++ + L TS KCG +
Sbjct: 201 SNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATS----------LIDMYAKCGDL 250
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
A +F+ P R L WNS++ +Q+ EE +F M ++G+ P+ +TFL ++ A
Sbjct: 251 RTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRAS 310
Query: 377 SHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
G GQ + G A +V++ + G + A + + + T + W
Sbjct: 311 MIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA-W 369
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVS 466
+ G HG A R+ E G+ +
Sbjct: 370 TVVIIGLASHGHGNEALSIFQRMQEKGNAT 399
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/430 (31%), Positives = 225/430 (52%), Gaps = 5/430 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE---AQEKSATTWSSVISS 138
G+Q+H ++KS L+S P LI+ YS +++ F + A S W+S++S
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
NE A+ Q+ ++ D + A+K C +G +H+ VV +G+++D
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
VGS VD++ G I++A K+F +P ++++++SG+I G + A LF+E +
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
L + F S++++VC + L G+QIHGLC+K Y+ KCG I+
Sbjct: 437 LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDN 496
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+F+ R++ W +++ Q+ EE F+ F +M N+G+ PN +TFL LL AC H
Sbjct: 497 GVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 379 GGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
GL+++ + MK +YG+EP +HY +VDLLG+AG QEA ++I MP+EP +++W
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWT 616
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
+ LT C H +A L A+++ + + LSN + + G
Sbjct: 617 SLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG 676
Query: 498 VKKETGLSWI 507
KE+G+SWI
Sbjct: 677 A-KESGMSWI 685
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 158/363 (43%), Gaps = 5/363 (1%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
LI+ Y K L ++ F + + +W+ +IS P A+E+ +M + + D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLD 237
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
P +KAC+ G +GK +H VVK+G + F S+ +DMY CG + A VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 224 E---MPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
+ +V W+ M+ + + E+E AL L + DL + +T S +++C N
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIA 340
L LG Q+H L + + Y+ G I+ A ++F+ P +++ ++ ++
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 341 CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPG 400
C + F LF + +G+ + +L CS + G+Q GL G E
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 401 AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF 460
+VD+ + G++ + + M +E W + G +G E A ++
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 461 ELG 463
+G
Sbjct: 537 NIG 539
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 179/418 (42%), Gaps = 37/418 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ I AH+IK + +++++I+ Y +L + + F+E E++ TW++++S
Sbjct: 23 RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 141 QNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ P+ AIE +R+M+ + ++ ++ + +KAC ++G +G ++ + K DV
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDE-------------------------------MPER 228
+ +S VDMY K G + A F E MP+
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
NVVSW+ +I + G AL+ E L ++ F ++ C LL +G+Q+H
Sbjct: 203 NVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLH 261
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI---RNLGMWNSMLIACAQHA 345
+K+ + CG + A+ VF++ + ++ +WNSML +
Sbjct: 262 CCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINE 321
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
E L ++ + + T L C + + G Q L+ G E +
Sbjct: 322 ENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS 381
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+VDL G +Q+A + +P + + G + GC G LA + + +LG
Sbjct: 382 ILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGCVKSGFNSLAFYLFRELIKLG 438
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 41/336 (12%)
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
D + + ++ C + G+SI A V+K G +VF+ ++ + MY + +A KVF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 223 DEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-LEDLSVNDFTFSSVIRVCGNSTLL 281
DEM ERN+V+W+ M+ Y G+ A++L++ L E+ + N+F +S+V++ CG +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 282 ELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIAC 341
+LG ++ K + K G + A+ F E + WN+++
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCL----------------------------- 372
+ +E LF RM +PN +++ CL
Sbjct: 184 CKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGF 239
Query: 373 -----LYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDII--K 425
L ACS GGL+ G+Q + G+E + ++D+ G L A D+ +
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
+ + + +VW + L+G ++ + E A + +I++
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 229/453 (50%), Gaps = 6/453 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG IH + K ++ +V L++ Y+K +++ F K+ T++++IS
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 141 Q-----NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF 195
Q +E S A + F M + P F +KAC+ + G+ IHA + K F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
D F+GS+ +++Y G ++ + F ++++ SW+ MI + + E+A LF++
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ ++T S ++ C + L G QI G +K+ D K G
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ A++VF E ++ +++M+ + AQH E +F+ MK G++PN FL +L A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 376 CSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
C HGGL+ +G +YF MK DY I P +H+ +VDLLGR G+L +A ++I + +
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 435 VWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLR 494
W A L+ CR++ D+ + A+R+ EL +SG VLL N +++R
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 495 DRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
DRGVKKE LSWI GN+ H+FA D SH ++
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQ 722
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 195/435 (44%), Gaps = 47/435 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ H H+IKSSL + ++L+N Y K + F+ Q F+ E++ +++S+IS Q
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+E F + N++ D + A+ C D+G+ +H VV G VF+
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ +DMY KCG++ A +FD ER+ VSW+ +I Y +G E L L + + L
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 262 SVNDFTFSSVIRVCG---NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
++ + SV++ C N +E G IH K + K G ++
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAH-----TEEVFKLFDRMKNVGMRPNFITFLCLL 373
A ++F+ P +N+ +N+M+ Q + E FKLF M+ G+ P+ TF +L
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 374 YACSHGGLIDKGQQ--------------YFG--LMKDYGI----EPGAQHYA-------- 405
ACS ++ G+Q + G L++ Y + E G Q +A
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA 425
Query: 406 ---TMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
+M+D + +L+ A D+ + + I P E ++ C A+ AA ++
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC-----ADFAALSSGEQ 480
Query: 460 FELGHVSSGMNVLLS 474
+ + SG++ S
Sbjct: 481 IQGYAIKSGIDAFTS 495
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 166 IFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM 225
+F +A K+ +++ +GK H ++K+ + +++ ++ ++MY KC E+ AR++FD M
Sbjct: 53 LFQTAAKSGSVV----LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRM 108
Query: 226 PERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
PERN++S++ +I Y +G E A++LF EA +L ++ FT++ + CG L+LG
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE 168
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
+HGL + KCG ++ A +F+ R+ WNS++ +
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG 228
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACS---HGGLIDKGQQYFGLMKDYGIEPGAQ 402
EE L +M G+ +L AC + G I+KG G+E
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 403 HYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++D+ + G L+EA+ + MP + + + A ++G
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT-YNAMISG 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
LG+ HG +K+S + KC + A ++F+ P RN+ +NS++
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
Q E+ +LF + ++ + T+ L C +D G+ GL+ G+
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 403 HYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
++D+ + GKL +A+ + E + W + ++G G AE
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYVRVGAAE 231
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 234/473 (49%), Gaps = 33/473 (6%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
++I+A II L + +++F K + ++ + F + + ++S+I + N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 143 ELPSLAIEYFRQMIIDNIR-PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L I ++Q++ + PD FP K+CA LG C +GK +H + K G V
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENA------------ 249
++ +DMY K ++ +A KVFDEM ER+V+SW+ ++ YA LG+ + A
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 250 -------------------LKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
+ F+E L + ++ + SV+ C LELG+ IH
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
+ + KCGVI A ++F + +++ W++M+ A H +
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVD 409
+ F+ M+ ++PN ITFL LL ACSH G+ +G +YF +M+ DY IEP +HY ++D
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
+L RAGKL+ A++I K MP++P +WG+ L+ CR G+ ++A A D + EL G
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRS 522
VLL+N KM+R+ +KK G S IE N V F +GD S
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 233/458 (50%), Gaps = 8/458 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVF---SLQAFEEAQEKSATTWSSVISS 138
G+Q+H+ I+S L + V L++ Y+K + F+ ++ S +W+++I+
Sbjct: 288 GKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 139 LAQN-ELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
+N L + AI F +MI ++ P+ F SA KAC L +GK + K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
+ V +S + M+ K +++A++ F+ + E+N+VS++ + E A KL E
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
+L V+ FTF+S++ N + G QIH +K KCG I
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ ASRVFN RN+ W SM+ A+H V + F++M G++PN +T++ +L AC
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 377 SHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
SH GL+ +G ++F M +D+ I+P +HYA MVDLL RAG L +A + I MP + V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W FL CR+H + EL AA +I EL + LSN + +++
Sbjct: 646 WRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEI 533
R + KE G SWIE G+++H F GD +H A + E+
Sbjct: 706 RNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 16/375 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQ---EKSATTWSSVISS 138
G+ +HA +I+ ++ ++ + LI+ YSK+ + FE + ++ +WS++++
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDV 197
N AI+ F + + + P+D+ + + I+AC+ +G+ F++KTG F+
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 198 DVFVGSSTVDMYGKCGE--IKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
DV VG S +DM+ K GE +NA KVFD+M E NVV+W+ MI +G A++ F +
Sbjct: 201 DVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKCG 314
+L + FT SSV C L LG+Q+H +++ D G
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADG 319
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAH-TEEVFKLFDRMKNVG-MRPNFITFLCL 372
++ +VF+ ++ W +++ ++ + E LF M G + PN TF
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 373 LYACSHGGLIDK--GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE 430
AC G L D G+Q G G+ + +++ + ++ ++++A +++ E
Sbjct: 380 FKAC--GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-E 436
Query: 431 PTESVWGAFLTG-CR 444
+ FL G CR
Sbjct: 437 KNLVSYNTFLDGTCR 451
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 10/303 (3%)
Query: 148 AIEYFRQMIIDNIRPDDHI-FPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTV 206
A+ M D IRP D + F S +K+C +GK +HA +++ + D + +S +
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 207 DMYGKCGEIKNARKVFDEM---PERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
+Y K G+ A VF+ M +R+VVSWS M+ Y G + +A+K+F E L L
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 264 NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG--VIEAASR 321
ND+ +++VIR C NS + +GR G +KT + G E A +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYK 224
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF++ N+ W M+ C Q E + F M G + T + AC+
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV--WGAF 439
+ G+Q G+ + ++VD+ + D K SV W A
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 440 LTG 442
+TG
Sbjct: 343 ITG 345
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+QIH+ ++K L V + LI+ YSK + + F + ++ +W+S+I+ A
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG-KSIHAFVVKTGFDVDV 199
++ +E F QMI + ++P++ + + + AC+ +G G + ++ +
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICA 239
+ VD+ + G + +A + + MP + +V+ W + A
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 223/424 (52%), Gaps = 6/424 (1%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQM-IIDNIRP 162
++N Y++ L + + F+E EK + +W+++++ + + P A+ + M + N RP
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 163 DDHIFPSAIKACAILGRCDI--GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARK 220
+ IF +I A I GK IH +V+ G D D + SS +DMYGKCG I AR
Sbjct: 217 N--IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 221 VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
+FD++ E++VVSW+ MI Y LF E + N++TF+ V+ C + T
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIA 340
ELG+Q+HG + +D KCG IE+A V + P +L W S++
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 341 CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEP 399
CAQ+ +E K FD + G +P+ +TF+ +L AC+H GL++KG ++F + + + +
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 400 GAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
+ HY +VDLL R+G+ ++ +I MP++P++ +W + L GC +G+ +LA AA +
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 460 FELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAG 519
F++ + V ++N K +++ GV K G SW E + H F A
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAA 574
Query: 520 DRSH 523
D SH
Sbjct: 575 DTSH 578
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 33/342 (9%)
Query: 154 QMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG 213
Q++ +P + + I+ C+ + GK +H + +GF + + + + MY KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 214 EIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED------------- 260
+ +ARKVFDEMP R++ SW+ M+ YA +G E A KLF E +D
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 261 -------------------LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
N FT S + + G++IHG ++ D
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
KCG I+ A +F++ +++ W SM+ + + E F LF +
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
RPN TF +L AC+ + G+Q G M G +P + +++VD+ + G ++ A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
++ P +P W + + GC +G + A D + + G
Sbjct: 375 HVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 9/282 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IH HI+++ L S ++ L++ Y K + F++ EK +W+S+I
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
++ F +++ RP+++ F + ACA L ++GK +H ++ + GFD F
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
SS VDMY KCG I++A+ V D P+ ++VSW+ +I A G+ + ALK F L
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQ-IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ TF +V+ C ++ L+E G + + + K + G E
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAH-------TEEVFKL 353
V +E P++ + +W S+L C+ + + +E+FK+
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 199/367 (54%), Gaps = 1/367 (0%)
Query: 158 DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN 217
D D + SA+++C + G H +K GF DV++GSS V +Y GE++N
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 218 ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGN 277
A KVF+EMPERNVVSW+ MI +A + LKL+ + ND+TF++++ C
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 278 STLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSM 337
S L GR +H L KCG ++ A R+F++ +++ WNSM
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 338 LIACAQHAHTEEVFKLFD-RMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYG 396
+ AQH + +LF+ M G +P+ IT+L +L +C H GL+ +G+++F LM ++G
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
Query: 397 IEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAA 456
++P HY+ +VDLLGR G LQEAL++I+ MP++P +WG+ L CR+HGD AA
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 457 DRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTF 516
+ L + +V L+N K+++D+G+K G SWIE N V F
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMF 473
Query: 517 AAGDRSH 523
A D S+
Sbjct: 474 KAEDGSN 480
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G H +K S + L+ Y + + + FEE E++ +W+++IS AQ
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ ++ + +M P+D+ F + + AC G G+S+H + G + +
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY KCG++K+A ++FD+ ++VVSW+ MI YA G A++LF+ + +
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 262 SVND-FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ D T+ V+ C ++ L++ GR+ L + + G+++ A
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 321 RVFNEAPIR-NLGMWNSMLIACAQHA 345
+ P++ N +W S+L +C H
Sbjct: 379 ELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +H + L+S +S+ LI+ Y K + + F++ K +W+S+I+ A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 141 QNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
Q+ L AIE F M+ +PD + + +C G G+ + + G ++
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALL 258
S VD+ G+ G ++ A ++ + MP + N V W ++ + + G+ ++ +E L+
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM 418
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 235/479 (49%), Gaps = 35/479 (7%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-FSLQAFEEAQEKSATTWSSVISSLAQ 141
+QIHA +IK+ L S + + ++ F + + ++ F K+ W+++I ++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 142 NELPSLAIEYFRQMIIDN--IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ P +AI F M+ + ++P +PS KA LG+ G+ +H V+K G + D
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 200 FVGSSTVDMY-------------------------------GKCGEIKNARKVFDEMPER 228
F+ ++ + MY KCG I A+ +FDEMP+R
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
N VSW+ MI + G ++AL +F+E +D+ + FT S++ C E GR IH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
++ ++ KCG IE VF AP + L WNSM++ A + E
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATM 407
LF ++ G+ P+ ++F+ +L AC+H G + + ++F LMK+ Y IEP +HY M
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 467
V++LG AG L+EA +IK MP+E +W + L+ CR G+ E+A AA + +L +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 468 GMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
VLLSN ++++R ++KE G S IE VH F + +H K+
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKS 520
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 35/301 (11%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFY-------------------------------SK 110
G+Q+H +IK L+ + + +++ Y +K
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 111 TQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
L + F+E +++ +W+S+IS +N A++ FR+M +++PD S
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV 230
+ ACA LG + G+ IH ++V+ F+++ V ++ +DMY KCG I+ VF+ P++ +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
W+ MI A G +E A+ LF E L + +F V+ C +S + + L
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 291 CLKTSY--DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI-RNLGMWNSMLIACAQHAHT 347
+K Y + G++E A + P+ + +W+S+L AC + +
Sbjct: 385 -MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
Query: 348 E 348
E
Sbjct: 444 E 444
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IH +I+++ + +V LI+ Y K L FE A +K + W+S+I LA
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF-VVKTGFDVDV 199
N A++ F ++ + PD F + ACA G ++ ++ F ++K + ++
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG--EVHRADEFFRLMKEKYMIEP 393
Query: 200 FVGSST--VDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFK 254
+ T V++ G G ++ A + MP E + V WS ++ A +G E A + K
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 227/447 (50%), Gaps = 1/447 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ I+ +++K+ V + LI+ Y+K + + F + K +W+S+IS Q
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A++ F+ M+I + D + I L GK +H+ +K+G +D+ V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +DMY KCGE+ ++ K+F M + V+W+ +I A G+ L++ + ++
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ TF + +C + LG++IH L+ Y+ KCG +E +SR
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF R++ W M+ A + E+ + F M+ G+ P+ + F+ ++YACSH GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D+G F MK Y I+P +HYA +VDLL R+ K+ +A + I+AMPI+P S+W + L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR GD E A + RI EL G ++L SN K L+D+ + K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITK 745
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAK 527
G SWIE G VH F++GD S +++
Sbjct: 746 NPGYSWIEVGKNVHVFSSGDDSAPQSE 772
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 189/368 (51%), Gaps = 5/368 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQ-EKSATTWSSVISSLAQ 141
++IHA +I L S S LI+ YS + P SL F K+ W+S+I + ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L A+E++ ++ + PD + FPS IKACA L ++G ++ ++ GF+ D+FV
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ VDMY + G + AR+VFDEMP R++VSW+ +I Y+ G E AL+++ E +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ FT SSV+ GN +++ G+ +HG LK+ + K A R
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGG 380
VF+E +R+ +N+M+ + EE ++F ++N+ +P+ +T +L AC H
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLR 321
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+ + + M G + ++D+ + G + A D+ +M + T S W + +
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNSII 380
Query: 441 TGCRLHGD 448
+G GD
Sbjct: 381 SGYIQSGD 388
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 170/371 (45%), Gaps = 10/371 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G ++ I+ +S V + L++ YS+ L + Q F+E + +W+S+IS +
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+E + ++ I PD S + A L G+ +H F +K+G + V V
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ V MY K +AR+VFDEM R+ VS++ MIC Y L E ++++F E L+
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQF 303
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ T SSV+R CG+ L L + I+ LK + KCG + A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VFN ++ WNS++ Q E KLF M + + + IT+L L+ + L
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR--L 421
Query: 382 ID----KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
D KG G+ I+ + ++D+ + G++ ++L I +M T + W
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WN 478
Query: 438 AFLTGCRLHGD 448
++ C GD
Sbjct: 479 TVISACVRFGD 489
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 177/372 (47%), Gaps = 2/372 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+GQ +H +KS + S+ +V++ L+ Y K + P + + F+E + + +++++I
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ E+ ++ F + +D +PD S ++AC L + K I+ +++K GF ++
Sbjct: 285 KLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + +D+Y KCG++ AR VF+ M ++ VSW+ +I Y G+ A+KLFK ++ +
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ T+ +I V L+ G+ +H +K+ KCG + +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
++F+ + WN+++ AC + ++ +M+ + P+ TFL L C+
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
G++ + +G E Q ++++ + G L+ + + + M + W +
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT-WTGMI 582
Query: 441 TGCRLHGDAELA 452
++G+ E A
Sbjct: 583 YAYGMYGEGEKA 594
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 218/429 (50%), Gaps = 5/429 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H + +KS L V L YSK S + F+ K W+S+IS +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
AI F +M+ D PD+ + + C+ GK IH + ++ G D + +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS+ V+MY KCG +K AR+V+D +PE + VS S +I Y+ G ++ LF++ ++
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+++ F SS+++ S LG Q+H K K G I+ +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
F++ +L W +++ + AQH E ++++ MK G +P+ +TF+ +L ACSHGGL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 382 IDKGQQYFGL---MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
++ + YF L +KDYGIEP +HY MVD LGR+G+L+EA I M I+P VWG
Sbjct: 769 VE--ESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C++HG+ EL AA + EL +G + LSN K+++ GV
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 499 KKETGLSWI 507
+KE G S +
Sbjct: 887 QKEPGWSSV 895
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 173/361 (47%), Gaps = 6/361 (1%)
Query: 88 HIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSL 147
H IK +V LI+ +SK + + F ++ + W+++I+ +N+
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
+ F +M + +PD + + S + ACA L + GK + A V+K G + DVFV ++ VD
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
+Y KCG + A +VF +P +VVSW+ M+ Y + +AL++FKE + +N+ T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA- 326
+SVI CG +++ Q+H K+ + K G I+ + +VF +
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
I+ + N M+ + +Q + +LF RM G+R + + LL S ++ G+
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGK 470
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLH 446
Q G G+ +++ L + G L+E+ + + +P + + W + ++G +
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEY 529
Query: 447 G 447
G
Sbjct: 530 G 530
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 11/376 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQE-KSATTWSSVISSL 139
+ Q+HA + KS V+ LI+ YSK+ S Q FE+ + + + +I+S
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+Q++ P AI F +M+ + +R D+ S ++L ++GK +H + +K+G +D+
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEF---SVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
VGSS +Y KCG ++ + K+F +P ++ W+ MI + G A+ LF E L +
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
S ++ T ++V+ VC + L G++IHG L+ D KCG ++ A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+V++ P + +S++ +QH ++ F LF M G + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 380 GLIDKGQQYFGLMKDYGI--EPG-AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
G Q + G+ EP TM G +A I P W
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING----PDLIAW 721
Query: 437 GAFLTGCRLHGDAELA 452
A + HG A A
Sbjct: 722 TALIASYAQHGKANEA 737
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IH + +++ + + L+N YSK + Q ++ E + SS+IS +
Sbjct: 569 RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYS 628
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q+ L FR M++ D S +KA A+ +G +HA++ K G +
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VGSS + MY K G I + K F ++ ++++W+ +I +YA G+ AL+++ +
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGR-QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ TF V+ C + L+E ++ + + + G + A
Sbjct: 749 FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
N I+ + +W ++L AC H E
Sbjct: 809 ESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 13/277 (4%)
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DVF+ S + Y G + +A K+FD +P+ +VVS + MI Y E +L+ F +
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
N+ ++ SVI C + +K Y K E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A +VF ++ N+ WN+++ ++ + VF LF M +P+ T+ +L AC+
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHY---ATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
+ G+ +++ I+ GA+ +VDL + G + EA+++ +P P+
Sbjct: 263 SLEKLRFGK----VVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVV 317
Query: 435 VWGAFLTGCRLHGDAELAAFAADRIF-ELGHVSSGMN 470
W L+G D AF+A IF E+ H +N
Sbjct: 318 SWTVMLSGYTKSND----AFSALEIFKEMRHSGVEIN 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 144/335 (42%), Gaps = 4/335 (1%)
Query: 85 IHAHIIKSSLQSIPL-VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
+ AH+++ L + ++ L+++YS + + + F+ + + + +IS Q+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
L ++ +F +M ++ + S I AC+ L + + +K G+ V S
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENAL-KLFKEALLEDLS 262
+ +D++ K ++A KVF + NV W+ +I A AL ++ A+ LF E +
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTII-AGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ +T+SSV+ C + L G+ + +K + KCG + A V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F+ P ++ W ML + ++F M++ G+ N T ++ AC ++
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
+ Q + G + A ++ + ++G +
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDI 402
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 231/449 (51%), Gaps = 8/449 (1%)
Query: 93 SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATT---WSSVISSLAQNELPSLAI 149
SL+ P + LI +S + + + F++ + S T W+++ ++N P A+
Sbjct: 162 SLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDAL 221
Query: 150 EYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMY 209
+ M+ I P + A+KAC L +G+ IHA +VK VD V + + +Y
Sbjct: 222 IVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLY 281
Query: 210 GKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFS 269
+ G +ARKVFD M ERNVV+W+ +I + LF++ E + + T +
Sbjct: 282 MESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT 341
Query: 270 SVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR 329
+++ C L G++IH LK+ KCG +E + RVF+ +
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 330 NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF 389
+L WN ML A + + EEV LF+ M G+ P+ ITF+ LL CS GL + G F
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 461
Query: 390 GLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGD 448
MK ++ + P +HYA +VD+LGRAGK++EA+ +I+ MP +P+ S+WG+ L CRLHG+
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
Query: 449 AELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIE 508
+ AA +F L + G V++SN +M++ RGVKKE G SW++
Sbjct: 522 VSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Query: 509 EGNRVHTFAAGD----RSHEKAKRNLSEI 533
+++ F AG R+ ++ K+ +E+
Sbjct: 582 VKDKIQIFVAGGGYEFRNSDEYKKVWTEL 610
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IHA I+K + +V + L+ Y ++ L + + F+ E++ TW+S+IS L++
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
FR+M + I + + AC+ + GK IHA ++K+ DV +
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S +DMYGKCGE++ +R+VFD M +++ SW+ M+ YA+ G E + LF+ + +
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX--XXXXXKCGVIEAA 319
+ + TF +++ C ++ L E G + +KT + + G I+ A
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAH 346
+V P + + +W S+L +C H +
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 234/452 (51%), Gaps = 4/452 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
++++ ++ + + + + ++ + K + + + + F+E E++ ++ S+IS
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A E F+ M + + H F ++A A LG +GK +H +K G + FV
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS 262
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+DMY KCG+I++AR F+ MPE+ V+W+ +I YAL G E AL L + +S
Sbjct: 263 CGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS 322
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
++ FT S +IR+ LEL +Q H ++ ++ K G ++ A V
Sbjct: 323 IDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYV 382
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F++ P +N+ WN+++ A H + KLF++M + PN +TFL +L AC++ GL
Sbjct: 383 FDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLS 442
Query: 383 DKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
++G + F M + +GI+P A HYA M++LLGR G L EA+ I+ P++ T ++W A L
Sbjct: 443 EQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLN 502
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
CR+ + EL A++++ +G G V++ N + L +G+
Sbjct: 503 ACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMM 562
Query: 502 TGLSWIEEGNRVHTFAAGDR---SHEKAKRNL 530
+W+E G++ H+F +GDR +E KR +
Sbjct: 563 PACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 14/275 (5%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H +K + VS LI+ YSK + AFE EK+ W++VI+ A
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+ M + D I+ L + ++ K HA +++ GF+ ++
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ VD Y K G + AR VFD++P +N++SW+ ++ YA G +A+KLF++ + ++
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 262 SVNDFTFSSVIRVCGNSTLLELG-------RQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
+ N TF +V+ C S L E G ++HG+ + + + G
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH------YACMIELLGRDG 476
Query: 315 VIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
+++ A AP++ + MW ++L AC + E
Sbjct: 477 LLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLE 511
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 3/331 (0%)
Query: 119 QAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAI 176
Q ++ Q KS T S I L A E F + I + + + + ++AC
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
L K ++ F++ GF+ + ++ + + M+ KCG I +AR++FDE+PERN+ S+ +
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
I + G A +LFK E TF+ ++R + +G+Q+H LK
Sbjct: 196 ISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV 255
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
KCG IE A F P + WN+++ A H ++EE L
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
M++ G+ + T ++ + ++ +Q + G E +VD + G+
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 417 LQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+ A + +P + S W A + G HG
Sbjct: 376 VDTARYVFDKLPRKNIIS-WNALMGGYANHG 405
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 225/443 (50%), Gaps = 9/443 (2%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLP--VFSLQAFEEAQEKSATTWSSVISSLAQ 141
QIH I SSLQ+ + L+ S + F+ + + + +TW+ + +
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
++ P +I + +M I+P+ FP +KACA G+ I V+K GFD DV+V
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ + +YG C + +ARKVFDEM ERNVVSW+ ++ A G+ + F E + +
Sbjct: 151 GNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF 210
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
++ T ++ CG + L LG+ +H + + K G +E A
Sbjct: 211 CPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARL 268
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR-MKNVGMRPNFITFLCLLYACSHGG 380
VF +N+ W++M++ AQ+ EE +LF + MK +RPN++TFL +L ACSH G
Sbjct: 269 VFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+D G +YF M K + I+P HY MVD+LGRAG+L EA D IK MP EP VW
Sbjct: 329 LVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTL 388
Query: 440 LTGCRLHGDAE---LAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
L+ C +H D + + R+ EL SG V+++N +++++
Sbjct: 389 LSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKET 448
Query: 497 GVKKETGLSWIEEGNRVHTFAAG 519
+KK G S +E G H F +G
Sbjct: 449 KMKKIAGESCLELGGSFHRFFSG 471
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 6/271 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QI ++K V ++LI+ Y + + + F+E E++ +W+S++++L +
Sbjct: 132 GRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVE 191
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N +L E F +MI PD+ + AC G +GK +H+ V+ +++ +
Sbjct: 192 NGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRL 249
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE-D 260
G++ VDMY K G ++ AR VF+ M ++NV +WS MI A G E AL+LF + + E
Sbjct: 250 GTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESS 309
Query: 261 LSVNDFTFSSVIRVCGNSTLLELG-RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ N TF V+ C ++ L++ G + H + + G + A
Sbjct: 310 VRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA 369
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAHTEE 349
+ P + +W ++L AC+ H H E+
Sbjct: 370 YDFIKKMPFEPDAVVWRTLLSACSIH-HDED 399
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 239/497 (48%), Gaps = 53/497 (10%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLP----VFSLQAFEEAQEKSATTWSSVISSL 139
QIHA IKS L + ++ F + + L ++ + F + +++ +W+++I
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 140 AQNELPS--LAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
++++ +AI F +M+ D + P+ FPS +KACA G+ GK IH +K GF
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 197 VDVFVGSSTVDMYGKCGEIKN--------------------------------------- 217
D FV S+ V MY CG +K+
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 218 ------ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSV 271
AR +FD+M +R+VVSW+ MI Y+L G ++A+++F+E D+ N T SV
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNL 331
+ LELG +H + KCG+IE A VF P N+
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 332 GMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGL 391
W++M+ A H + F +M+ G+RP+ + ++ LL ACSHGGL+++G++YF
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 392 MKDY-GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
M G+EP +HY MVDLLGR+G L EA + I MPI+P + +W A L CR+ G+ E
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 451 LAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEG 510
+ A+ + ++ SG V LSN ++++ ++K+ G S I+
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Query: 511 NRVHTFAAGDRSHEKAK 527
+H F D SH KAK
Sbjct: 521 GVLHEFVVEDDSHPKAK 537
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H + S ++ ++ LI+ YSK + ++ FE ++ TWS++I+ A
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT-GFDVDVF 200
+ AI+ F +M +RP D + + + AC+ G + G+ + +V G + +
Sbjct: 353 HGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDE 247
VD+ G+ G + A + MP + + V W ++ A + G E
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 204/348 (58%), Gaps = 4/348 (1%)
Query: 182 IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA 241
+G++IH+ V+++GF ++V +S + +Y CG++ +A KVFD+MPE+++V+W+ +I +A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
G+ E AL L+ E + + + FT S++ C L LG+++H +K
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV- 360
+CG +E A +F+E +N W S+++ A + +E +LF M++
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQE 419
G+ P ITF+ +LYACSH G++ +G +YF M+ +Y IEP +H+ MVDLL RAG++++
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 420 ALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXX 479
A + IK+MP++P +W L C +HGD++LA FA +I +L SG VLLSN
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 305
Query: 480 XXXXXXXXXXXK-MLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
K MLRD GVKK G S +E GNRVH F GD+SH ++
Sbjct: 306 EQRWSDVQKIRKQMLRD-GVKKVPGHSLVEVGNRVHEFLMGDKSHPQS 352
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 146/288 (50%), Gaps = 7/288 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH+ +I+S S+ V + L++ Y+ + + F++ EK W+SVI+ A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N P A+ + +M I+PD S + ACA +G +GK +H +++K G ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA-LLED 260
+ +D+Y +CG ++ A+ +FDEM ++N VSW+ +I A+ G + A++LFK E
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEA 318
L + TF ++ C + +++ G + + ++ Y + + G ++
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 319 ASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
A P++ N+ +W ++L AC H ++ F R++ + + PN
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 227/448 (50%), Gaps = 5/448 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
QQ+HAH+I + + LI + ++ F ++SVI S ++
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
LP + Y+R+M+ N+ P ++ F S IK+CA L IGK +H V +GF +D +V
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
++ V Y KCG+++ AR+VFD MPE+++V+W+ ++ + G + A+++F +
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ TF S++ C + + LG +H + D +CG + A V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK-NVGMRPNFITFLCLLYACSHGGL 381
F++ N+ W +M+ A H + ++ +LF++M+ + G PN +TF+ +L AC+H GL
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 382 IDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDII---KAMPIEPTESVWG 437
+++G+ + M K Y + PG +H+ MVD+LGRAG L EA I A ++W
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWT 385
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
A L C++H + +L A R+ L + G +V+LSN +
Sbjct: 386 AMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSHEK 525
++K+ G S IE N+ + F+ GD SH++
Sbjct: 446 LRKQVGYSVIEVENKTYMFSMGDESHQE 473
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 22/297 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H H + S V L+ FYSK + Q F+ EKS W+S++S Q
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N L AI+ F QM PD F S + ACA G +G +H +++ G D++V +
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ +++Y +CG++ AR+VFD+M E NV +W+ MI AY G + A++LF + +ED
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK--MEDD 303
Query: 262 S---VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXX--XXXXXXXXXXXXKCGVI 316
N+ TF +V+ C ++ L+E GR ++ K SY + G +
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK-SYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 317 EAASRVFNE--------APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
+ A + ++ AP +W +ML AC H + + ++ R+ + + P+
Sbjct: 363 DEAYKFIHQLDATGKATAP----ALWTAMLGACKMHRNYDLGVEIAKRL--IALEPD 413
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 220/445 (49%), Gaps = 3/445 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H +I+ + + + L+N Y+K++ ++ F+ EK +WS+VI+ Q
Sbjct: 163 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 222
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N + A+ F M+ D P+ ++ACA + G+ H ++ G + +V V
Sbjct: 223 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 282
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ VDMY KC + A VF +P ++VVSW +I + L G +++ F LLE+
Sbjct: 283 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 342
Query: 262 SVND-FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ D V+ C LE + H +K +D +CG + AS
Sbjct: 343 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 402
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHG 379
+VFN +++ +W S++ H + + F+ M K+ ++PN +TFL +L ACSH
Sbjct: 403 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 462
Query: 380 GLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GLI +G + F LM DY + P +HYA +VDLLGR G L A++I K MP PT + G
Sbjct: 463 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 522
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L CR+H + E+A A ++FEL +G +L+SN ++ RG+
Sbjct: 523 LLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 582
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSH 523
KK S IE +VH F A D H
Sbjct: 583 KKGLAESLIEIRRKVHRFVADDELH 607
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 176/369 (47%), Gaps = 4/369 (1%)
Query: 82 GQQIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+ IH + K +L S V LI Y K + +L+ F+E ++ TWSS++S
Sbjct: 60 GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFE 119
Query: 141 QNELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+N P A+E+FR+M++ ++ PD + + AC L +G+ +H FV++ GF D+
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ +S ++ Y K K A +F + E++V+SWS +I Y G AL +F + + +
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N T V++ C + LE GR+ H L ++ + KC E A
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 299
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSH 378
VF+ P +++ W +++ + + F M RP+ I + +L +CS
Sbjct: 300 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 359
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G +++ + + + YG + A++V+L R G L A + + ++ T VW +
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT-VVWTS 418
Query: 439 FLTGCRLHG 447
+TG +HG
Sbjct: 419 LITGYGIHG 427
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 3/326 (0%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
++S W++++ SL++ + + +F M D +PD+ P A+KAC L + G+
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEM 62
Query: 186 IHAFVVK-TGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG 244
IH FV K D++VGSS + MY KCG + A ++FDE+ + ++V+WS M+ + G
Sbjct: 63 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG 122
Query: 245 EDENALKLFKEALL-EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
A++ F+ ++ D++ + T +++ C + LGR +HG ++ +
Sbjct: 123 SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV 182
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
K + A +F +++ W++++ Q+ E +F+ M + G
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
PN T LC+L AC+ +++G++ L G+E + +VD+ + +EA +
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 424 IKAMPIEPTESVWGAFLTGCRLHGDA 449
+P + S W A ++G L+G A
Sbjct: 303 FSRIPRKDVVS-WVALISGFTLNGMA 327
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 2/212 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++ H I+ L++ VS L++ Y K P + F K +W ++IS
Sbjct: 263 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 322
Query: 141 QNELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N + +IE F M++ +N RPD + + +C+ LG + K H++V+K GFD +
Sbjct: 323 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 382
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-L 258
F+G+S V++Y +CG + NA KVF+ + ++ V W+ +I Y + G+ AL+ F +
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 442
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
++ N+ TF S++ C ++ L+ G +I L
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 474
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 86/205 (41%), Gaps = 2/205 (0%)
Query: 225 MPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELG 284
M +R++ W+ ++ + + + E L F ++ ++FT ++ CG + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 285 RQIHGLCLK-TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
IHG K + KCG + A R+F+E ++ W+SM+ +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 344 HAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
+ + + F RM + P+ +T + L+ AC+ G+ G + G
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 403 HYATMVDLLGRAGKLQEALDIIKAM 427
++++ ++ +EA+++ K +
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMI 205
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 205/385 (53%), Gaps = 3/385 (0%)
Query: 125 QEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGK 184
Q A W++++ S ++E P AI+ + M+ + PD + P IKA + +GK
Sbjct: 78 QYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGK 137
Query: 185 SIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG 244
+H+ V+ GF D F S + +Y K GE +NARKVFDE PER + SW+ +I G
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 245 EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL--KTSYDXXXXX 302
A+++F + L +DFT SV CG L L Q+H L KT
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
KCG ++ AS +F E RN+ W+SM++ A + +T E + F +M+ G+
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEAL 421
RPN ITF+ +L AC HGGL+++G+ YF +MK ++ +EPG HY +VDLL R G+L+EA
Sbjct: 318 RPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXX 481
+++ MP++P VWG + GC GD E+A + A + EL + G+ V+L+N
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRG 437
Query: 482 XXXXXXXXXKMLRDRGVKKETGLSW 506
K+++ + V K S+
Sbjct: 438 MWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 6/272 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++H+ ++ I Y K + + F+E E+ +W+++I L
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV--KTGFDVDV 199
+ A+E F M + PDD S +C LG + +H V+ KT D+
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ +S +DMYGKCG + A +F+EM +RNVVSWS MI YA G AL+ F++
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX--XXXXXXKCGVIE 317
+ N TF V+ C + L+E G+ + +K+ ++ + G ++
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAM-MKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 318 AASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
A +V E P++ N+ +W ++ C + E
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVE 406
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 84 QIHAHII--KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
Q+H ++ K+ +S ++ + LI+ Y K + FEE ++++ +WSS+I A
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A+E FRQM +RP+ F + AC G + GK+ A ++K+ F+++ +
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGL 357
Query: 202 G--SSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENA 249
VD+ + G++K A+KV +EMP + NV+ W ++ G+ E A
Sbjct: 358 SHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 218/447 (48%), Gaps = 1/447 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH H+I + V++ L Y++ L FE E+ +W+S+I + +
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+E F +M + P++ F S ACA L R G+ +H V+ G + + V
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY CG + +A +F M R+++SWS +I Y G E K F
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
DF +S++ V GN ++E GRQ+H L L + KCG I+ AS
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F E ++ +M+ A+H ++E LF++ VG RP+ +TF+ +L AC+H G
Sbjct: 468 IFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D G YF +M++ Y + P +HY MVDLL RAG+L +A +I M + + VW L
Sbjct: 528 LDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
C+ GD E AA+RI EL + V L+N K ++ +GV K
Sbjct: 588 IACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAK 527
E G S I+ + V F +GDR H +++
Sbjct: 648 EPGWSSIKIKDCVSAFVSGDRFHPQSE 674
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 185/382 (48%), Gaps = 1/382 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +HA+ +K+SL S V L++ Y + S + F E ++A TW+++I+ L
Sbjct: 127 GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVH 186
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ YF +M D + F A+KACA L + GK+IH V+ GF + V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S MY +CGE+++ +F+ M ER+VVSW+ +I AY +G++ A++ F + +
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N+ TF+S+ C + + L G Q+H L + CG + +AS
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F R++ W++++ Q EE FK F M+ G +P LL + +
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
I+ G+Q L +G+E + ++++++ + G ++EA I + S+ A +
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL-TAMIN 485
Query: 442 GCRLHGDAELAAFAADRIFELG 463
G HG ++ A ++ ++G
Sbjct: 486 GYAEHGKSKEAIDLFEKSLKVG 507
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 141/326 (43%), Gaps = 3/326 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQM-IIDN-IRPDDHIFPSAIKACAI 176
Q F++ +W+S+I A+ F M ++D+ + PD + +KAC
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
G+S+HA+ VKT V+VGSS +DMY + G+I + +VF EMP RN V+W+ +
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
I G + L F E + + +TF+ ++ C ++ G+ IH + +
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
+CG ++ +F R++ W S+++A + + + F +
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
M+N + PN TF + AC+ + G+Q + G+ +M+ + G
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360
Query: 417 LQEALDIIKAMPIEPTESVWGAFLTG 442
L A + + M S W + G
Sbjct: 361 LVSASVLFQGMRCRDIIS-WSTIIGG 385
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 213 GEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT--FSS 270
G ++ AR+VFD+MP ++VSW+ +I Y + AL LF + D +V+ T S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
V++ CG S+ + G +H +KTS + G I+ + RVF+E P RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
W +++ +E F M + TF L AC+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 226/448 (50%), Gaps = 7/448 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQE-KSATTWSSVISSLAQ 141
+Q+H + S V++ + +YSK L ++ F E + +W+S+I + Q
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ 217
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
++ + A+ +++MI + D S + A L G+ H ++K GF + V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 202 GSSTVDMYGKCGE---IKNARKVFDEMPERNVVSWSGMICAYALLGE-DENALKLFKEAL 257
GS +D Y KCG + ++ KVF E+ ++V W+ MI Y++ E E A+K F++
Sbjct: 278 GSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKCGVI 316
+D +F V C N + +QIHGL +K+ K G +
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNL 397
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ A VF+ P N +N M+ AQH H E L+ RM + G+ PN ITF+ +L AC
Sbjct: 398 QDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
Query: 377 SHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
+H G +D+GQ+YF MK+ + IEP A+HY+ M+DLLGRAGKL+EA I AMP +P
Sbjct: 458 AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA 517
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W A L CR H + LA AA+ + + +++ V+L+N K +R
Sbjct: 518 WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRG 577
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSH 523
+ ++K+ G SWIE + H F A D SH
Sbjct: 578 KRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 183/419 (43%), Gaps = 40/419 (9%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSK-------------TQLP-VFSL--------- 118
G+ +HA +KS + S +S+H +N YSK T+ P VFS
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 119 --------QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
Q F+E + +++++IS A A+ F++M D
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE-RN 229
I AC R D+ K +H F V GFD V ++ V Y K G ++ A VF M E R+
Sbjct: 147 IAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
VSW+ MI AY E AL L+KE + + ++ FT +SV+ + L GRQ HG
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEA---ASRVFNEAPIRNLGMWNSMLIACAQHAH 346
+K + KCG + + +VF E +L +WN+M+ + +
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE 324
Query: 347 -TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGL-MKDYGIEPGAQHY 404
+EE K F +M+ +G RP+ +F+C+ ACS+ + +Q GL +K +
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
++ L ++G LQ+A + MP E + + G HG A R+ + G
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 133/317 (41%), Gaps = 37/317 (11%)
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG----------------------------- 213
GKS+HA VK+ ++ + V++Y KCG
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 214 --EIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSV 271
+I AR++FDE+P+ + VS++ +I YA E A+ LFK V+ FT S +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI-EAASRVFNEAPIRN 330
I C + ++L +Q+H + +D K G++ EA S + +R+
Sbjct: 147 IAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
WNSM++A QH + L+ M G + + T +L A + + G+Q+ G
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 391 LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP--IEPTESVWGAFLTGCRLHGD 448
+ G + + ++D + G D K + P VW ++G ++ +
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEE 324
Query: 449 -AELAAFAADRIFELGH 464
+E A + ++ +GH
Sbjct: 325 LSEEAVKSFRQMQRIGH 341
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 237/446 (53%), Gaps = 5/446 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE-AQEKSATTWSSVISSLAQ 141
+Q+HA ++K LQ + + +I+ Y+ + + F+ K +W+S+I+ ++
Sbjct: 168 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 227
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+EL A E F QM + D + + + AC+ GKS+H V+K G +
Sbjct: 228 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 287
Query: 202 GSSTVDMYGK--CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
++ + MY + G +++A +F+ + ++++SW+ +I +A G E+A+K F
Sbjct: 288 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 347
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
++ V+D+ FS+++R C + L+LG+QIH L K+ + KCG+IE+A
Sbjct: 348 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 407
Query: 320 SRVFNEAPIRNLGM-WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+ F + ++ + WN+M++ AQH + LF +M N ++ + +TF +L ACSH
Sbjct: 408 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSH 467
Query: 379 GGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
GLI +G + LM+ Y I+P +HYA VDLLGRAG + +A ++I++MP+ P V
Sbjct: 468 TGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLK 527
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
FL CR G+ E+A A+ + E+ V LS+ KM+++RG
Sbjct: 528 TFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERG 587
Query: 498 VKKETGLSWIEEGNRVHTFAAGDRSH 523
VKK G SWIE N+V F A DRS+
Sbjct: 588 VKKVPGWSWIEIRNQVKAFNAEDRSN 613
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 121/214 (56%), Gaps = 7/214 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFS----LQAFEEAQEKSATTWSSVIS 137
G+ +H +IK L+ + ++ LI+ Y Q P + L FE + K +W+S+I+
Sbjct: 269 GKSLHGMVIKKGLEQVTSATNALISMY--IQFPTGTMEDALSLFESLKSKDLISWNSIIT 326
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
AQ L A+++F + I+ DD+ F + +++C+ L +G+ IHA K+GF
Sbjct: 327 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 386
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEA 256
+ FV SS + MY KCG I++ARK F ++ + + V+W+ MI YA G + +L LF +
Sbjct: 387 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM 446
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
+++ ++ TF++++ C ++ L++ G ++ L
Sbjct: 447 CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 480
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 9/338 (2%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+E ++ + +W+++IS A F M D + F +K A + R
Sbjct: 3 FDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRF 62
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
D+G+ +H V+K G++ +V+VGSS VDMY KC +++A + F E+ E N VSW+ +I +
Sbjct: 63 DLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 122
Query: 241 ALLGEDENALKLFKEALLE---DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYD 297
+ + + A L L+E ++++ TF+ ++ + + L +Q+H LK
Sbjct: 123 VQVRDIKTAFWLL--GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 180
Query: 298 XXXXXXXXXXXXXXKCGVIEAASRVFNE-APIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
CG + A RVF+ ++L WNSM+ ++H E F+LF +
Sbjct: 181 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 240
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR--A 414
M+ + + T+ LL ACS G+ G++ G+E ++ + +
Sbjct: 241 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 300
Query: 415 GKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
G +++AL + +++ + S W + +TG G +E A
Sbjct: 301 GTMEDALSLFESLKSKDLIS-WNSIITGFAQKGLSEDA 337
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 166/370 (44%), Gaps = 4/370 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H +IK + V L++ Y+K + + +AF+E E ++ +W+++I+ Q
Sbjct: 65 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 124
Query: 142 NELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
A M + + D F + C++ K +HA V+K G ++
Sbjct: 125 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 184
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEM-PERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ ++ + Y CG + +A++VFD + ++++SW+ MI ++ E+A +LF +
Sbjct: 185 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 244
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK--CGVIE 317
+ + +T++ ++ C G+ +HG+ +K + + G +E
Sbjct: 245 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 304
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A +F ++L WNS++ AQ +E+ K F +++ ++ + F LL +CS
Sbjct: 305 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 364
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
+ GQQ L G ++++ + + G ++ A + + + + W
Sbjct: 365 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 424
Query: 438 AFLTGCRLHG 447
A + G HG
Sbjct: 425 AMILGYAQHG 434
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%)
Query: 221 VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
+FDEMP+R+ VSW+ MI Y G+ E+A LF V+ ++FS +++ +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIA 340
+LG Q+HGL +K Y+ KC +E A F E N WN+++
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 341 CAQHAHTEEVFKLFDRMK 358
Q + F L M+
Sbjct: 122 FVQVRDIKTAFWLLGLME 139
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F+E P R+ WN+M+ E+ + LF MK G + +F LL +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
D G+Q GL+ G E +++VD+ + ++++A + K + EP W A +
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 120
Query: 442 G 442
G
Sbjct: 121 G 121
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 228/441 (51%), Gaps = 2/441 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+++H + +K LV++ + Y+K ++ + F + K+ +W+++I AQ+
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
P L+++ QM I + PD S + AC+ L +GK +H F+++ + D+FV
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 534
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S + +Y CGE+ + +FD M ++++VSW+ +I Y G + AL +F++ +L +
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ + V C L LGR+ H LK + K G I +S+V
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
FN ++ WN+M++ H +E KLF+ M+ G P+ +TFL +L AC+H GLI
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 383 DKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDII-KAMPIEPTESVWGAFL 440
+G +Y MK +G++P +HYA ++D+LGRAG+L +AL ++ + M E +W + L
Sbjct: 715 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+ CR+H + E+ A ++FEL VLLSN + + + ++K
Sbjct: 775 SSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Query: 501 ETGLSWIEEGNRVHTFAAGDR 521
+ G SWIE +V +F G+R
Sbjct: 835 DAGCSWIELNRKVFSFVVGER 855
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 152/305 (49%), Gaps = 8/305 (2%)
Query: 82 GQQIHAHIIKSS-LQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G++IH + S+ L++ ++ +I Y+ P S F+ + K+ W++VISS +
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 141 QNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+NEL +E F +MI ++ PD +P IKACA + IG ++H VVKTG DV
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FVG++ V YG G + +A ++FD MPERN+VSW+ MI ++ G E + L E + E
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 260 D----LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ + T +V+ VC + LG+ +HG +K D KCG
Sbjct: 283 NGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG--MRPNFITFLCLL 373
I A +F +N+ WN+M+ + T F + +M G ++ + +T L +
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 374 YACSH 378
C H
Sbjct: 403 PVCFH 407
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 9/381 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H ++K+ L V + L++FY +LQ F+ E++ +W+S+I +
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 142 NELPSLAIEYFRQMIIDN----IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
N + +M+ +N PD + + CA +GK +H + VK D
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
++ + ++ +DMY KCG I NA+ +F +NVVSW+ M+ ++ G+ + ++ L
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 258 L--EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
ED+ ++ T + + VC + + L +++H LK + KCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ A RVF+ + + WN+++ AQ +MK G+ P+ T LL A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
CS + G++ G + +E Y +++ L G+L + AM + S
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS- 564
Query: 436 WGAFLTGCRLHG--DAELAAF 454
W +TG +G D L F
Sbjct: 565 WNTVITGYLQNGFPDRALGVF 585
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++ HA+ +K L+ ++ LI+ Y+K S + F +EKS +W+++I
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG-KSIHAFVVKTGFDVDVF 200
+ L AI+ F +M PDD F + AC G G + + G ++
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 735
Query: 201 VGSSTVDMYGKCGEIKNA-RKVFDEMPER-NVVSWSGMICA 239
+ +DM G+ G++ A R V +EM E +V W ++ +
Sbjct: 736 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 235/446 (52%), Gaps = 5/446 (1%)
Query: 82 GQQIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+ IHA II S SL +PL + L++ Y + F + +W+S+IS +
Sbjct: 319 GKLIHARIIVSDSLADLPL-DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 141 QNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+N A+ +R+++ + RPD++ F +AI A A R GK +H V K G++ V
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FVG++ + MY K E ++A+KVFD M ER+VV W+ MI ++ LG E A++ F E E
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ F+ SSVI C + +L G H L ++T +D K G E A
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+F+ A +L WNSML A +QH E+ F+++ G P+ +T+L LL ACSH
Sbjct: 558 ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHR 617
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES-VWGA 438
G +G+ + MK+ GI+ G +HY+ MV+L+ +AG + EAL++I+ P ++ +W
Sbjct: 618 GSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRT 677
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L+ C + ++ +AA++I +L + ++LLSN + +R
Sbjct: 678 LLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLAS 737
Query: 499 KKETGLSWIE-EGNRVHTFAAGDRSH 523
K+ GLSWIE N F++GD+S+
Sbjct: 738 SKDPGLSWIEVNNNNTQVFSSGDQSN 763
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 177/380 (46%), Gaps = 12/380 (3%)
Query: 81 KGQQIHAHIIKSSLQSI---PLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVIS 137
+ +QIHA ++ + + P +++LI+ Y + + + F++ ++ +++++ S
Sbjct: 112 RARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYS 171
Query: 138 SLAQN-ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
+ ++N + S A M + ++P+ F S ++ CA+L +G S+++ ++K G+
Sbjct: 172 AYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS 231
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
+V V +S + MY CG++++AR++FD + R+ V+W+ MI + E+ L F+
Sbjct: 232 DNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM 291
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
L+ + FT+S V+ C LG+ IH + + CG +
Sbjct: 292 LMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDM 351
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM-RPNFITFLCLLYA 375
A VF NL WNS++ C+++ E+ ++ R+ + RP+ TF + A
Sbjct: 352 REAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR---AGKLQEALDIIKAMPIEPT 432
+ G+ G + G E T++ + + A Q+ D++K E
Sbjct: 412 TAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK----ERD 467
Query: 433 ESVWGAFLTGCRLHGDAELA 452
+W + G G++ELA
Sbjct: 468 VVLWTEMIVGHSRLGNSELA 487
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 10/188 (5%)
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM--ICAYALLGEDENA--LKLFKE 255
+ ++ + MY +C ++ ARKVFD+MP+RN+V+ G+ + Y +G ++ +KL
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 256 ALLEDLSVNDFTFSSV--IRVCGNSTLLELGRQIHGLCLKTSYDXXX---XXXXXXXXXX 310
++ + +N+ S V R C + T+L+ RQIH L L
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 311 XKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH-TEEVFKLFDRMKNVGMRPNFITF 369
+CG +E A +VF++ P RN+ +N++ A +++ F L M ++PN TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 370 LCLLYACS 377
L+ C+
Sbjct: 203 TSLVQVCA 210
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 208/409 (50%), Gaps = 2/409 (0%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
+L+ F++ K+ +W+++I L QNE A++ F+ M+ I+ F I ACA
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
+G +H ++K GF + +V +S + Y C I ++RKVFDE V W+ +
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
+ Y+L + E+AL +F L + N TF+S + C L+ G+++HG+ +K
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
+ G + A VF + +++ WNS+++ CAQH + F +F +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD--YGIEPGAQHYATMVDLLGRA 414
M + P+ ITF LL ACSH G ++KG++ F M I+ QHY MVD+LGR
Sbjct: 418 MIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRC 477
Query: 415 GKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLS 474
GKL+EA ++I+ M ++P E VW A L+ CR+H D + AA IF L SS VLLS
Sbjct: 478 GKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLS 537
Query: 475 NXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
N ++ G+ K+ G SW+ + H F +GD+ H
Sbjct: 538 NIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 159/352 (45%), Gaps = 15/352 (4%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I Y+++ V +L F+E + +W+S+IS + + A++ F +M P+
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PE 125
Query: 164 DHI--FPSAIKACAILGRCDIGKSI-HAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARK 220
+ + + + C G+ D + + + VK D +S V Y + G++ +A K
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALK 180
Query: 221 VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
+F +MP +NV+SW+ MIC AL LFK L + F+ VI C N+
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIA 340
+G Q+HGL +K + C I + +VF+E + +W ++L
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 341 CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPG 400
+ + E+ +F M + PN TF L +CS G +D G++ G+ G+E
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETD 360
Query: 401 AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
A ++V + +G + +A+ + + + S W + + GC HG + A
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS-WNSIIVGCAQHGRGKWA 411
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H IIK VS LI FY+ + S + F+E + W++++S +
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A+ F M+ ++I P+ F S + +C+ LG D GK +H VK G + D FV
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+S V MY G + +A VF ++ ++++VSW+ +I A G + A +F + + +
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK--TSYDXXXXXXXXXXXXXXKCGVIEAA 319
++ TF+ ++ C + LE GR++ D +CG ++ A
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEA 483
Query: 320 SRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
+ ++ N +W ++L AC H+ +
Sbjct: 484 EELIERMVVKPNEMVWLALLSACRMHSDVD 513
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 234/489 (47%), Gaps = 32/489 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G I H++K L+ + V + I+ ++ + + F+E+ + +W+ +I+ +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
AI ++ M + ++PDD + +C++LG + GK + +V + G + + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG----------------- 244
++ +DM+ KCG+I AR++FD + +R +VSW+ MI YA G
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 245 --------------EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
++AL LF+E + ++ T + C L++G IH
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
K S KCG I A VF+ RN + +++ A H
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVD 409
F+ M + G+ P+ ITF+ LL AC HGG+I G+ YF MK + + P +HY+ MVD
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
LLGRAG L+EA ++++MP+E +VWGA L GCR+HG+ EL AA ++ EL SG+
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRN 529
VLL +M+ +RGV+K G S IE V F D+S ++++
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Query: 530 LSEIGGIGR 538
+ +GR
Sbjct: 655 YDRLHCLGR 663
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 37/417 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINF--YSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+QI A +I + L P S LI F S+++ +S++ + + + +W+ I +
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 141 QNELPSLAIEYFRQMIIDNI---RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
++E P + ++QM+ RPD +P K CA L +G I V+K ++
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
V ++++ M+ CG+++NARKVFDE P R++VSW+ +I Y +GE E A+ ++K
Sbjct: 190 VSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
E + +D T ++ C L G++ + + KCG I
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 318 AASRVFNEAPIR-------------------------------NLGMWNSMLIACAQHAH 346
A R+F+ R ++ +WN+M+ Q
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
++ LF M+ +P+ IT + L ACS G +D G ++ Y + +
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+VD+ + G + EAL + + + + + A + G LHGDA A + + + G
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGLALHGDASTAISYFNEMIDAG 485
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 202/382 (52%), Gaps = 2/382 (0%)
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
A+ ++ +M+ PD+ +P +KAC L GK IH V K G + DVFV +S ++
Sbjct: 116 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 175
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE-DLSVNDF 266
MYG+CGE++ + VF+++ + SWS M+ A A +G L LF+ E +L +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 267 TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA 326
S + C N+ L LG IHG L+ + KCG ++ A +F +
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
RN +++M+ A H E ++F +M G+ P+ + ++ +L ACSH GL+ +G+
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 387 QYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRL 445
+ F ++K+ +EP A+HY +VDLLGRAG L+EAL+ I+++PIE + +W FL+ CR+
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415
Query: 446 HGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLS 505
+ EL AA + +L + G +L+SN + +G+K+ G S
Sbjct: 416 RQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 506 WIEEGNRVHTFAAGDRSHEKAK 527
+E + H F + DRSH K K
Sbjct: 476 IVELKGKTHRFVSQDRSHPKCK 497
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 141/264 (53%), Gaps = 3/264 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+QIH + K L++ V + LIN Y + S FE+ + K+A +WSS++S+ A
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 141 QNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ S + FR M + N++ ++ SA+ ACA G ++G SIH F+++ ++++
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V +S VDMY KCG + A +F +M +RN +++S MI AL GE E+AL++F + + E
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS-YDXXXXXXXXXXXXXXKCGVIEA 318
L + + SV+ C +S L++ GR++ LK + + G++E
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 319 ASRVFNEAPI-RNLGMWNSMLIAC 341
A PI +N +W + L C
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQC 413
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 235/481 (48%), Gaps = 43/481 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLP--VFSLQAFEEAQEKSATTWSSVISSLA 140
+Q+HAH +++ + + L+ +P V++ + F+ Q ++ +I +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLL------LIPNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P +I + + D +RP H F A A + +H+ ++GF+ D F
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF------- 253
++ + Y K G + AR+VFDEM +R+V W+ MI Y G+ + A++LF
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 254 -----------------KEALL------EDLSV--NDFTFSSVIRVCGNSTLLELGRQIH 288
EAL +D SV N T SV+ C N LE+GR++
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE-APIRNLGMWNSMLIACAQHAHT 347
G + + KCG+I+ A R+F E RNL WNSM+ + A H
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYAT 406
+E LF +M G +P+ +TF+ LL AC HGG++ KGQ+ F M++ + I P +HY
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
M+DLLGR GKLQEA D+IK MP++P VWG L C HG+ E+A A++ +F+L +
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 467 SGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSW-IEEGNRVHTFAAGDRSHEK 525
G V++SN K+++ + K G S+ +E G VH F D+SH +
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 526 A 526
+
Sbjct: 479 S 479
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 234/453 (51%), Gaps = 14/453 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+QIH IK +S+ V + L++ YSK + F + E++ +W+++ISS
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD 354
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+ F M D + P++ F I A + G IH +KTGF + V
Sbjct: 355 D-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+S + +Y K +++A+K F+++ R ++SW+ MI +A G ALK+F A E +
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM 469
Query: 262 SVNDFTFSSVIRVCGNSTLLEL--GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N++TF SV+ + + + G++ H LK + K G I+ +
Sbjct: 470 P-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+VFNE +N +W S++ A + H E V LF +M + P+ +TFL +L AC+
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 380 GLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G++DKG + F +M + Y +EP +HY+ MVD+LGRAG+L+EA +++ +P P ES+ +
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L CRLHG+ ++ A A+ E+ SG V + N K +R + V
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
Query: 499 KKETGLSWIEEGN-----RVHTFAAGDRSHEKA 526
KE G SWI+ G+ + F++GD+SH K+
Sbjct: 709 SKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKS 741
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 14/370 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G QIH S S VS+ ++ Y K +L FE + +W++++S
Sbjct: 94 RGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD 153
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N++ A+ + +M + D + +A+ C +G + + VVKTG + D+
Sbjct: 154 DNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE-DENALKLFKEALLE 259
VG+S + MY + G + AR+VFDEM ++++SW+ ++ + G A+ +F++ + E
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ ++ +F+SVI C + T L+L RQIHGLC+K Y+ KCGV+EA
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF++ RN+ W +M+ ++ ++ +F M+ G+ PN +TF+ L+ A
Sbjct: 331 KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 380 GLIDKGQQYFGLMKDYGI--EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
I +G + GL G EP + + + L + L++A + + S W
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIIS-WN 442
Query: 438 AFLTGCRLHG 447
A ++G +G
Sbjct: 443 AMISGFAQNG 452
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G +IH IK+ S P V + I Y+K + + +AFE+ + +W+++IS A
Sbjct: 390 EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFA 449
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI--GKSIHAFVVKTGFDVD 198
QN A++ F + + P+++ F S + A A + G+ HA ++K G +
Sbjct: 450 QNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSC 508
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
V S+ +DMY K G I + KVF+EM ++N W+ +I AY+ G+ E + LF + +
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKCGVIE 317
E+++ + TF SV+ C +++ G +I + ++ + + + G ++
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
Query: 318 AASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
A + +E P M SML +C H + +
Sbjct: 629 EAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 220/439 (50%), Gaps = 42/439 (9%)
Query: 132 WSSVISSLAQN-ELPSL--AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHA 188
W+ +I ++ N P I + +M + PD H FP + + +G+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 189 FVVKTGFDVDVFVGSSTVDMYGKCGEIK-------------------------------N 217
++ G D D FV +S ++MY CG+++ +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 218 ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED-----LSVNDFTFSSVI 272
ARK+FDEMPERNV+SWS +I Y + G+ + AL LF+E L + N+FT S+V+
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE-APIRNL 331
CG LE G+ +H K + KCG +E A RVFN +++
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 332 GMWNSMLIACAQHAHTEEVFKLFDRMKNV-GMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
+++M+ A + T+E F+LF M + PN +TF+ +L AC H GLI++G+ YF
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 391 LM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+M +++GI P QHY MVDL GR+G ++EA I +MP+EP +WG+ L+G R+ GD
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 450 ELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEE 509
+ A R+ EL ++SG VLLSN + +G+ K G S++E
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 510 GNRVHTFAAGDRSHEKAKR 528
VH F GD S ++++R
Sbjct: 447 EGVVHEFVVGDESQQESER 465
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 38/243 (15%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQ+ HA I+ L P V L+N YS + + F+++ K W+SV+++ A+
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 142 -----------NELPSL--------------------AIEYFRQMIIDN-----IRPDDH 165
+E+P A++ FR+M + +RP++
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 166 IFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM 225
+ + AC LG + GK +HA++ K ++D+ +G++ +DMY KCG ++ A++VF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 226 -PERNVVSWSGMICAYALLGEDENALKLFKEALLED-LSVNDFTFSSVIRVCGNSTLLEL 283
+++V ++S MIC A+ G + +LF E D ++ N TF ++ C + L+
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 284 GRQ 286
G+
Sbjct: 321 GKS 323
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE-AQEKSATTWSSVISSL 139
+G+ +HA+I K ++ ++ LI+ Y+K + + F +K +S++I L
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCL 276
Query: 140 AQNELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT-GFDV 197
A L + F +M DNI P+ F + AC G + GKS +++ G
Sbjct: 277 AMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGED---ENALKLF 253
+ VD+YG+ G IK A MP E +V+ W ++ +LG+ E ALK
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 254 KE 255
E
Sbjct: 397 IE 398
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 238/479 (49%), Gaps = 36/479 (7%)
Query: 83 QQIHAHI-IKSSLQSIPLVSHHLINF-YSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+QIHA + + +L+ LV H + S + ++ Q + +++ + +S+I +
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 141 QNELPSLAIEYFRQMII--DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
++ +P + +++R+++ ++++PD++ ++AC L + G +H ++ GFD D
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 199 VFVGSSTVDMYG-------------------------------KCGEIKNARKVFDEMPE 227
V + + +Y +CG++ ARK+F+ MPE
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
R+ ++W+ MI YA +GE AL +F LE + VN SV+ C L+ GR
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
H + KCG +E A VF +N+ W+S L A +
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYAT 406
E+ +LF MK G+ PN +TF+ +L CS G +D+GQ++F M++ +GIEP +HY
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGC 382
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
+VDL RAG+L++A+ II+ MP++P +VW + L R++ + EL A+ ++ EL +
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETAN 442
Query: 467 SGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEK 525
G VLLSN + ++ +GV+K+ G S +E VH F GD+SH K
Sbjct: 443 HGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK 501
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ H++I ++ ++ ++ L++ Y+K +++ F +EK+ TWSS ++ LA
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N +E F M D + P+ F S ++ C+++G D G+ H ++ F ++
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQ 376
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICA 239
+ VD+Y + G +++A + +MP + + WS ++ A
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 241/479 (50%), Gaps = 38/479 (7%)
Query: 83 QQIHAHIIKSSLQSI-PLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+QIH HII S S+ + + L+ FY + + + F ++++ +I A+
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG--FDVDV 199
A++ + +M+ D I PD++ S + C L +GK +H ++ + G + ++
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 200 FVGSSTVDMYGKC-------------------------------GEIKNARKVFDEMPER 228
+ ++ +DMY KC G+++ A+ VFD+MP+R
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 229 NVVSWSGMICAYALLGEDENALK-LFKE-ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
++VSW+ ++ Y+ G D+ ++ LF E ++E + + T S+I N+ L GR
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
+HGL ++ KCG+IE A VF A +++ +W SM+ A H +
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYA 405
++ +LF RM+ G+ PN +T L +L ACSH GL+++G F MKD +G +P +HY
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 406 TMVDLLGRAGKLQEALDII-KAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGH 464
++VDLL RAG+++EA DI+ K MP+ P++S+WG+ L+ CR D E A A + +L
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 465 VSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
G VLLSN + + +RGVKK G S + +H F A ++ +
Sbjct: 570 EKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 186/429 (43%), Gaps = 45/429 (10%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKT---QLPVFSLQAFEEAQEKSATTWSSVISSL 139
+Q+ A I++ +L LI F + T L + L + ++++IS++
Sbjct: 51 KQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV 110
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVD 198
+ ++ + + MI + PD F +KA + L K IH ++ +G +
Sbjct: 111 SSSKNECFGL--YSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLG 165
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
++ +S V Y + G A KVF MP +V S++ MI YA G ALKL+ + +
Sbjct: 166 NYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS--YDXXXXXXXXXXXXXXKC--- 313
+ + +++T S++ CG+ + + LG+ +HG + Y KC
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 314 ----------------------------GVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
G +EAA VF++ P R+L WNS+L ++
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 346 HTEE-VFKLFDRMKNV-GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQH 403
+ V +LF M V ++P+ +T + L+ ++ G + G+ GL+ ++ A
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+ ++D+ + G ++ A + K E ++W + +TG HG+ + A R+ E G
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 464 HVSSGMNVL 472
+ + +L
Sbjct: 465 VTPNNVTLL 473
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H +I+ L+ +S LI+ Y K + + F+ A EK W+S+I+ LA
Sbjct: 387 GRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAF 446
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF---VVKTGFDVD 198
+ A++ F +M + + P++ + + AC+ G + G +H F K GFD +
Sbjct: 447 HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG--LHVFNHMKDKFGFDPE 504
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFD-EMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
S VD+ + G ++ A+ + +MP R S G I + GED +L L
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 258 LE 259
L+
Sbjct: 565 LK 566
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 209/426 (49%), Gaps = 34/426 (7%)
Query: 132 WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV 191
W+ VI + + P +I + QM+ + PD +P +K+ + L +G S+H VV
Sbjct: 822 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 881
Query: 192 KTGFDVDVFVGSSTVDMYG-------------------------------KCGEIKNARK 220
K+G + D+F+ ++ + MYG K G++ +AR
Sbjct: 882 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 941
Query: 221 VFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-LEDLSVNDFTFSSVIRVCGNST 279
VFDEM ER+VV+WS MI Y GE AL++F + + + N+ T SVI C +
Sbjct: 942 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 1001
Query: 280 LLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG--MWNSM 337
L G+ +H L KCG I A VF A ++ MWN++
Sbjct: 1002 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 1061
Query: 338 LIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGI 397
+ A H E +LF +M+ + P+ ITFLCLL ACSHGGL+ + +F +K+ G
Sbjct: 1062 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 1121
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
EP ++HYA MVD+L RAG +++A D I MPI+PT S+ GA L GC HG+ ELA
Sbjct: 1122 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGK 1181
Query: 458 RIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFA 517
++ EL + G V L+N + + +GVKK G S ++ H F
Sbjct: 1182 KLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFI 1241
Query: 518 AGDRSH 523
A D++H
Sbjct: 1242 AHDKTH 1247
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI-IDNIRP 162
+++ Y+K+ V + F+E E+ TWSS+I + + A+E F QM+ + + +
Sbjct: 926 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 985
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
++ S I ACA LG + GK++H +++ + V + +S +DMY KCG I +A VF
Sbjct: 986 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVF 1045
Query: 223 --DEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTL 280
+ E + + W+ +I A G +L+LF + + ++ TF ++ C + L
Sbjct: 1046 YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGL 1105
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG-MWNSMLI 339
++ ++ + + G+++ A +E PI+ G M ++L
Sbjct: 1106 VKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 1165
Query: 340 ACAQHAHTE 348
C H + E
Sbjct: 1166 GCINHGNLE 1174
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 237/464 (51%), Gaps = 9/464 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLV-SHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+Q H + K+ + +P+V + L+ YS+ S F +E+ +W+++IS+
Sbjct: 337 GRQFHGFVSKN-FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN L + +M + D + + A + L +IGK HAF+++ G +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-G 454
Query: 201 VGSSTVDMYGKCGEIKNARKVFDE--MPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ S +DMY K G I+ ++K+F+ ER+ +W+ MI Y G E +F++ L
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+++ N T +S++ C ++LG+Q+HG ++ D K G I+
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +F++ RN + +M++ QH E LF M+ G++P+ ITF+ +L ACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 379 GGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT-ESVW 436
GLID+G + F M++ Y I+P ++HY + D+LGR G++ EA + +K + E +W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 437 GAFLTGCRLHGDAELAAFAADRI--FELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLR 494
G+ L C+LHG+ ELA ++R+ F+ G SG VLLSN + +R
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 495 DRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGR 538
++G+KKE G S IE V+ F + D+ H + I G+ +
Sbjct: 755 EKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAK 798
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 5/339 (1%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACA 175
S + F+ E++ W+++I QN+ +IE F + I I D+ + A A +
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 176 ILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSG 235
L + ++G+ H FV K ++ + + +S + MY +CG + + VF M ER+VVSW+
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 236 MICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS 295
MI A+ G D+ L L E + ++ T ++++ N E+G+Q H ++
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 296 YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI--RNLGMWNSMLIACAQHAHTEEVFKL 353
K G+I + ++F + R+ WNSM+ Q+ HTE+ F +
Sbjct: 450 IQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
F +M +RPN +T +L ACS G +D G+Q G ++ + +VD+ +
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 414 AGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
AG ++ A D+ E + + G HG E A
Sbjct: 569 AGAIKYAEDMFSQTK-ERNSVTYTTMILGYGQHGMGERA 606
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 176/391 (45%), Gaps = 13/391 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFY-SKTQLP-VFSL----QAFEEAQEKSATTWSSV 135
G+ +H H+I+ S +V + L+N Y S P F + F+ + K+ W+++
Sbjct: 126 GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTL 185
Query: 136 ISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG- 194
IS + + A F M+ ++P F + A +I + ++K G
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGD 245
Query: 195 -FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF 253
+ D+FV SS + MY + G+I+++R+VFD ERN+ W+ MI Y +++LF
Sbjct: 246 EYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF 305
Query: 254 KEAL-LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
EA+ +++ ++ T+ +ELGRQ HG K + +
Sbjct: 306 LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSR 365
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
CG + + VF R++ WN+M+ A Q+ +E L M+ G + ++IT L
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 373 LYACSHGGLIDKGQQYFGLMKDYGIE-PGAQHYATMVDLLGRAGKLQEALDIIKAMPI-E 430
L A S+ + G+Q + GI+ G Y ++D+ ++G ++ + + + E
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 431 PTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
++ W + ++G +G E ++ E
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 21/330 (6%)
Query: 114 PVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRP----DDHIFPS 169
P + Q F+ + + W+++I N LP A+ ++ +M P D + + S
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTYSS 112
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMY------GKCGEIKNARKVFD 223
+KACA GK++H +++ + V +S ++MY C E RKVFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
M +NVV+W+ +I Y G + A + F + ++ + +F +V S ++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 284 GRQIHGLCLK--TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIAC 341
+GL LK Y + G IE++ RVF+ RN+ +WN+M+
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 342 AQHAHTEEVFKLFDRMKNVGMR---PNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGI 397
Q+ E +LF ++ +G + + +T+L A S ++ G+Q+ G + K++
Sbjct: 293 VQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE 350
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
P + MV + R G + ++ + +M
Sbjct: 351 LPIVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 213 GEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED---LSVNDFTFS 269
G + AR++FD +P+ V W+ +I + AL LF + + + + +T+S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL-LFYSRMKKTAPFTNCDAYTYS 111
Query: 270 SVIRVCGNSTLLELGRQIHG---LCLKTS---YDXXXXXXXXXXXXXXKCGVIEAASRVF 323
S ++ C + L+ G+ +H CL+ S C + +VF
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 324 NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
+ +N+ WN+++ + E + F M + ++P+ ++F+ + A S I
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 384 KGQQYFGLMKDYGIE 398
K ++GLM G E
Sbjct: 232 KANVFYGLMLKLGDE 246
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 225/460 (48%), Gaps = 33/460 (7%)
Query: 102 HHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIR 161
+++++ Y K+ + V + F+ E+ +W++++ AQ+ A+ ++++ I+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 162 PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKV 221
++ F + AC + + + H V+ GF +V + S +D Y KCG++++A++
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 222 FDEM-------------------------------PERNVVSWSGMICAYALLGEDENAL 250
FDEM PE+N VSW+ +I Y G AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 251 KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
LF++ + + FTFSS + + L G++IHG ++T+
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 311 XKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITF 369
K G +EA+ RVF + + WN+M+ A AQH + ++ D M ++PN T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 370 LCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
+ +L ACSH GL+++G ++F M +GI P +HYA ++DLLGRAG +E + I+ MP
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 429 IEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXX 488
EP + +W A L CR+HG+ EL AAD + +L SS +LLS+
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 489 XXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKR 528
+++ R V KE +SWIE +V F D SH A++
Sbjct: 537 LRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARK 576
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 148/377 (39%), Gaps = 63/377 (16%)
Query: 134 SVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT 193
S +S A S A+ + IR + S ++ C GK IH + T
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 194 GFD-VDVFVGSSTVDMYGKCGE------------IKN-------------------ARKV 221
GF + + + + MY KCG+ ++N AR V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 222 FDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLL 281
FD MPER+VVSW+ M+ YA G AL +KE + N+F+F+ ++ C S L
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 282 ELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIAC 341
+L RQ HG L + KCG +E+A R F+E ++++ +W +++
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 342 AQHAHTEEVFK-------------------------------LFDRMKNVGMRPNFITFL 370
A+ E K LF +M +G++P TF
Sbjct: 256 AKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE 430
L A + + G++ G M + P A ++++D+ ++G L+ + + + +
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK 375
Query: 431 PTESVWGAFLTGCRLHG 447
W ++ HG
Sbjct: 376 HDCVFWNTMISALAQHG 392
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK-SATTWSSVISSLA 140
G++IH ++I+++++ +V LI+ YSK+ S + F +K W+++IS+LA
Sbjct: 330 GKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALA 389
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG-KSIHAFVVKTGFDVDV 199
Q+ L A+ MI ++P+ + AC+ G + G + + V+ G D
Sbjct: 390 QHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQ 449
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ +D+ G+ G K + +EMP E + W+ ++ + G +E K E +
Sbjct: 450 EHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK 509
Query: 259 ED 260
D
Sbjct: 510 LD 511
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 226/483 (46%), Gaps = 37/483 (7%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q H ++I + L L I S ++ F + +++I +L+
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 143 ELP---SLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ P S+AI +R++ +PD FP +K + G+ IH VV GFD V
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPE-------------------------------- 227
V + + MY CG + +ARK+FDEM
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 228 -RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
RN VSW+ +I YA G A+++F+ L+E++ ++ T +V+ C + LELG +
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
I + K G I A VF RN+ W +++ A H H
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYA 405
E +F+RM G+RPN +TF+ +L ACSH G +D G++ F M+ YGI P +HY
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHV 465
M+DLLGRAGKL+EA ++IK+MP + ++WG+ L +H D EL A + +L
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 466 SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEK 525
+SG +LL+N M++ GVKK G S IE NRV+ F +GD +H +
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQ 511
Query: 526 AKR 528
+R
Sbjct: 512 VER 514
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++I +++ + +++ +I+ Y+K+ +L FE E++ TW+++I+ LA
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSI-HAFVVKTGFDVDVF 200
+ + A+ F +M+ +RP+D F + + AC+ +G D+GK + ++ K G ++
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICA 239
+D+ G+ G+++ A +V MP + N W ++ A
Sbjct: 389 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 222/451 (49%), Gaps = 6/451 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATT-WSSVISSLAQ 141
+++H K S V L+ YSK + + F+E ++ + W+++++ +Q
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+ F +M + + H S + A + G D G+SIH VKTG D+ V
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +DMYGK ++ A +F+ M ER++ +W+ ++C + G+ + L LF+ L +
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY----DXXXXXXXXXXXXXXKCGVIE 317
+ T ++V+ CG L GR+IHG + + KCG +
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLR 419
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A VF+ +++ WN M+ + E +F M G++P+ ITF+ LL ACS
Sbjct: 420 DARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACS 479
Query: 378 HGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
H G +++G+ + M+ Y I P + HYA ++D+LGRA KL+EA ++ + PI VW
Sbjct: 480 HSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVW 539
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
+ L+ CRLHG+ +LA A R+ EL G VL+SN +R +
Sbjct: 540 RSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQ 599
Query: 497 GVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
VKK G SWI N VHTF G+++H + K
Sbjct: 600 NVKKTPGCSWIVLKNGVHTFFTGNQTHPEFK 630
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 184/380 (48%), Gaps = 15/380 (3%)
Query: 82 GQQIHAHII-KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
GQQIH ++ K L P L+N Y+K L ++ F E+ ++++IS
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-GSERDVFGYNALISGFV 137
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N P A+E +R+M + I PD + FPS +K + D+ K +H K GFD D +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCY 196
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALLE 259
VGS V Y K +++A+KVFDE+P+R + V W+ ++ Y+ + E+AL +F + E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ V+ T +SV+ S ++ GR IHGL +KT K +E A
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 320 SRVFNEAPIRNLGMWNSMLIA---CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ +F R+L WNS+L C H T LF+RM G+RP+ +T +L C
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGT---LALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 377 SHGGLIDKGQQYFGLMKDYGI----EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
+ +G++ G M G+ + +++D+ + G L++A + +M ++ +
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS 433
Query: 433 ESVWGAFLTGCRLHGDAELA 452
S W + G + ELA
Sbjct: 434 AS-WNIMINGYGVQSCGELA 452
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 227/457 (49%), Gaps = 1/457 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H+ ++K L++ YS + + + F+E ++S TW+++ S
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ AI+ F++M+ ++PD + + AC +G D G+ I ++ + + FV
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ V++Y KCG+++ AR VFD M E+++V+WS MI YA + ++LF + L E+L
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ F+ + C + L+LG L + + KCG +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF E +++ + N+ + A++ H + F +F + + +G+ P+ TFL LL C H GL
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 382 IDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
I G ++F + Y ++ +HY MVDL GRAG L +A +I MP+ P VWGA L
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+GCRL D +LA + L ++G V LSN M+ +G+KK
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIG 537
G SWIE +VH F A D+SH + + +++ +G
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLG 586
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 166/373 (44%), Gaps = 7/373 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLIN---FYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
+QIH +I L + + L+ F+ +T+ +S F Q + ++S+I+
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK---YSYLLFSHTQFPNIFLYNSLINGF 86
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N L ++ F + + FP +KAC +G +H+ VVK GF+ DV
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+S + +Y G + +A K+FDE+P+R+VV+W+ + Y G A+ LFK+ +
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + + V+ C + L+ G I + KCG +E A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF+ +++ W++M+ A ++ +E +LF +M ++P+ + + L +C+
Sbjct: 267 RSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G +D G+ L+ + ++D+ + G + ++ K M E + A
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAA 385
Query: 440 LTGCRLHGDAELA 452
++G +G +L+
Sbjct: 386 ISGLAKNGHVKLS 398
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 219/449 (48%), Gaps = 2/449 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IH +K + V+ L++ Y K + + F++ KS W+S+I
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+E +MII+ RP S + AC+ GK IH +V+++ + D++
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V S +D+Y KCGE A VF + + SW+ MI +Y +G A++++ + +
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + TF+SV+ C LE G+QIH ++ + KCG + A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+FN P +++ W M+ A H E FD M+ G++P+ +T L +L AC H G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP-IEPTESVWGA 438
LID+G ++F M+ YGIEP +HY+ M+D+LGRAG+L EA +II+ P +
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
+ C LH + L A + E + ++L N +++ G+
Sbjct: 586 LFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGL 645
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
+K+ G SWIE ++V F A DRSH +A+
Sbjct: 646 RKKPGCSWIEMSDKVCHFFAEDRSHLRAE 674
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 196/391 (50%), Gaps = 1/391 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH ++KS +V+ L+ Y+K L SLQ F+E E+ +W++VIS Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+E F +M P+ AI AC+ L + GK IH VK GF++D +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
S+ VDMYGKC ++ AR+VF +MP +++V+W+ MI Y G+ ++ +++ ++E
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ T +S++ C S L G+ IHG +++ + KCG A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF++ WN M+ + + + +++D+M +VG++P+ +TF +L ACS
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
++KG+Q + + +E + ++D+ + G +EA I ++P + S W ++
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMIS 484
Query: 442 GCRLHGDAELAAFAADRIFELGHVSSGMNVL 472
HG A + D + + G G+ +L
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLL 515
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 177/381 (46%), Gaps = 3/381 (0%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKS-ATTWSSVISSLAQNE 143
+H I+ L+ ++ LIN Y + + FE +S W+S++S ++N
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 144 LPSLAIEYFRQMIIDNI-RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
+ +E F++++ +I PD FP+ IKA LGR +G+ IH VVK+G+ DV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
SS V MY K +N+ +VFDEMPER+V SW+ +I + GE E AL+LF
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
N + + I C LE G++IH C+K ++ KC +E A V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F + P ++L WNSM+ ++ ++ +RM G RP+ T +L ACS +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
G+ G + + +++DL + G+ A + + ES W ++
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES-WNVMISS 384
Query: 443 CRLHGDAELAAFAADRIFELG 463
G+ A D++ +G
Sbjct: 385 YISVGNWFKAVEVYDQMVSVG 405
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 208/420 (49%), Gaps = 38/420 (9%)
Query: 146 SLAIEYFRQMIIDNI-RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
S A +FR M+ ++ RP+ I+P +K+ L +H + K+GF + V V ++
Sbjct: 107 SSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTA 166
Query: 205 TVDMYGK-CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA------- 256
+ Y I AR++FDEM ERNVVSW+ M+ YA G+ NA+ LF++
Sbjct: 167 LLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS 226
Query: 257 -------------LLEDLSV------------NDFTFSSVIRVCGNSTLLELGRQIHGLC 291
LE +S+ N+ T V+ C + L+L + IH
Sbjct: 227 WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVF 351
+ KCG +E AS VF A ++L WNSM+ A H +EE
Sbjct: 287 YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAI 346
Query: 352 KLFDRMKNVGM---RPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATM 407
+F+ M + + +P+ ITF+ LL AC+HGGL+ KG+ YF LM + +GIEP +HY +
Sbjct: 347 AVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 467
+DLLGRAG+ EAL+++ M ++ E++WG+ L C++HG +LA A + L +
Sbjct: 407 IDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
Query: 468 GMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
G +++N KM++ + K G S IE N VH F + D+SH + +
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 17/266 (6%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGR 179
FE+ E+ +W++++++ QN L A+ FR+MI + +IRP++ + ACA G
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 180 CDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICA 239
+ K IHAF + DVFV +S VD+YGKCG ++ A VF ++++ +W+ MI
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINC 335
Query: 240 YALLGEDENALKLFKEAL---LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL-KTS 295
+AL G E A+ +F+E + + D+ + TF ++ C + L+ GR L +
Sbjct: 336 FALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFG 395
Query: 296 YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE--EVFK 352
+ + G + A V + ++ + +W S+L AC H H + EV
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEV-- 453
Query: 353 LFDRMKN-VGMRPN---FITFLCLLY 374
+KN V + PN ++ + LY
Sbjct: 454 ---AVKNLVALNPNNGGYVAMMANLY 476
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ IHA + L S VS+ L++ Y K + F+ A +KS T W+S+I+ A
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 142 NELPSLAIEYFRQMI---IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV-KTGFDV 197
+ AI F +M+ I++I+PD F + AC G G+ + + G +
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
+ +D+ G+ G FDE E V+S M A+ G NA K+
Sbjct: 399 RIEHYGCLIDLLGRAGR-------FDEALE--VMSTMKMKADEAIWGSLLNACKIHGHLD 449
Query: 258 LEDLSVNDFT 267
L +++V +
Sbjct: 450 LAEVAVKNLV 459
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 236/489 (48%), Gaps = 35/489 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+Q+H +I+ S V + +I +Y+K + + F+E E+ +W+S+IS +Q
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 142 NELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ + ++ M+ + +P+ S +AC G +H +++ +D+
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE----- 255
+ ++ + Y KCG + AR +FDEM E++ V++ +I Y G + A+ LF E
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 256 -----ALLEDLSVNDF------TFSSVIRVCGN----------------STLLELGRQIH 288
A++ L N+ +F +IR CG+ S+ L+ G++IH
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
++ D K G + A RVF+ R+L W +++ A A H ++
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEPGAQHYATM 407
LFD+M+ +G +P+ +T +L A +H G D Q F ++ Y IEPG +HYA M
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 467
V +L RAGKL +A++ I MPI+P VWGA L G + GD E+A FA DR+FE+ ++
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 468 GMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
G +++N ++ G+KK G SWIE + +F A D S E++K
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSK 629
Query: 528 RNLSEIGGI 536
I G+
Sbjct: 630 EMYEIIEGL 638
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 189/424 (44%), Gaps = 48/424 (11%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q+HA I+ S++ ++ LI+FY++ +L F+E ++A ++++++ + E
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIK-ACAI--LGRCD------IGKSIHAFVVKTG 194
+ A F I + D P +I +C + L CD + + +H FV++ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
FD DVFVG+ + Y KC I++ARKVFDEM ER+VVSW+ MI Y+ G E+ K++K
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 255 EAL-LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
L D N T SV + CG S+ L G ++H ++ KC
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 314 GVIEAASRVFNEAPIRN-------------------------------LGMWNSMLIACA 342
G ++ A +F+E ++ L WN+M+
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLM 342
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
Q+ H EEV F M G RPN +T LL + ++ + G++ G +
Sbjct: 343 QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 403 HYATMVDLLGRAGKL---QEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
+++D + G L Q D K + + W A +T +HGD++ A D++
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCK----DRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 460 FELG 463
LG
Sbjct: 459 QCLG 462
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 129/341 (37%), Gaps = 46/341 (13%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
+LQ + +I ++ LP ++ ++++ +I+PD+
Sbjct: 10 ALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDN------------ 57
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
F+ S + Y + + A VFDE+ RN S++ +
Sbjct: 58 -----------------------FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNAL 94
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVND------FTFSSVIRV---CGNSTLLELGRQI 287
+ AY +A LF + +D + S V++ C + L L RQ+
Sbjct: 95 LIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQV 154
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
HG ++ +D KC IE+A +VF+E R++ WNSM+ +Q
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 348 EEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
E+ K++ M +PN +T + + AC + G + M + I+
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA 274
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
++ + G L A + M E +GA ++G HG
Sbjct: 275 VIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG 314
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 231/490 (47%), Gaps = 46/490 (9%)
Query: 82 GQQIHAHIIKSSLQSIP--LVSHHLINFYSKTQLPVFSLQAFEEA--QEKSATTWSSVIS 137
G+++HA + S L+ P +S+ L FY+ + V + + F+E EK W++++S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
S ++ L +++ F +M + DD CA L + H VK G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 198 DVFVGSSTVDMYGKCG---EIKN----------------------------ARKVFDEMP 226
V V ++ +DMYGKCG E+K R+VF EMP
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 227 ERNVVSWSGMICAYALLGEDENALKLFKEALLE-DLSVNDFTFSSVIRVCGNSTLLELGR 285
ERN V+W+ M+ Y G L+L E + +N T S++ C S L +GR
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 286 QIHGLCLK--------TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSM 337
+H LK SYD KCG I+++ VF RN+ WN++
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYA-KCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 338 LIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGI 397
A H V +F +M ++P+ +TF +L ACSH G++D+G + F ++ YG+
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGL 382
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
EP HYA MVDLLGRAG ++EA +++ MP+ P E V G+ L C +HG E+A
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKR 442
Query: 458 RIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFA 517
+ ++ ++ +L+SN LR RG++K GLS I + VH F+
Sbjct: 443 ELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFS 502
Query: 518 AGDRSHEKAK 527
+GDRSH + K
Sbjct: 503 SGDRSHPRTK 512
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 235/475 (49%), Gaps = 33/475 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++++A I S ++ L+ L++ Y K + + F+E + +++ S+ +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L A+ F M+ +RPD SAI +C+ L GKS H +V++ GF+ +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK---------- 251
++ +DMY KC A ++FD M + VV+W+ ++ Y GE + A +
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 252 --------------LFKEAL--------LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
LF+EA+ E ++ + T S+ CG+ L+L + I+
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
K +CG E+A +FN R++ W + + A A + E
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ-YFGLMKDYGIEPGAQHYATMV 408
+LFD M G++P+ + F+ L ACSHGGL+ +G++ ++ ++K +G+ P HY MV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSG 468
DLLGRAG L+EA+ +I+ MP+EP + +W + L CR+ G+ E+AA+AA++I L +G
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 469 MNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
VLLSN ++++G++K G S I+ + H F +GD SH
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 3/339 (0%)
Query: 116 FSLQAFEEAQE-KSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKAC 174
F+ + FE ++ + ++S+I A + L + AI F +M+ I PD + FP + AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 175 AILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWS 234
A G IH +VK G+ D+FV +S V Y +CGE+ +ARKVFDEM ERNVVSW+
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 235 GMICAYALLGEDENALKLFKEALL-EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK 293
MIC YA ++A+ LF + E+++ N T VI C LE G +++
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 294 TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKL 353
+ + KC I+ A R+F+E NL + N+M + T E +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
F+ M + G+RP+ I+ L + +CS I G+ G + G E ++D+ +
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 414 AGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ A I M T W + + G +G+ + A
Sbjct: 385 CHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 34/416 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G QIH I+K V + L++FY++ + + F+E E++ +W+S+I A
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 141 QNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ + A++ F +M+ D + P+ I ACA L + G+ ++AF+ +G +V+
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ S+ VDMY KC I A+++FDE N+ + M Y G AL +F +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKC------ 313
+ + + S I C + G+ HG L+ ++ KC
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 314 -------------------------GVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
G ++AA F P +N+ WN+++ Q + E
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 349 EVFKLFDRMKNV-GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
E ++F M++ G+ + +T + + AC H G +D + + ++ GI+ + T+
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
VD+ R G + A+ I ++ S W A + + G+AE A D + E G
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDV-SAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 12/265 (4%)
Query: 168 PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG---EIKNARKVFDE 224
PS++K C + D K H + K G D DV + V + G + A++VF+
Sbjct: 36 PSSLKNCKTI---DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 225 MPERNVV-SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
++ +I YA G A+ LF + +S + +TF + C S
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 284 GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
G QIHGL +K Y +CG +++A +VF+E RN+ W SM+ A+
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 344 HAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
++ LF RM ++ + PN +T +C++ AC+ ++ G++ + +++ GIE
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 403 HYATMVDLLGRAGKLQEALDIIKAM 427
+ +VD+ + A+D+ K +
Sbjct: 273 MVSALVDMYMKC----NAIDVAKRL 293
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 227/474 (47%), Gaps = 32/474 (6%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++H H++K L S V + L+ YS L + F+ ++ +W+ +IS +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ +IE +M + + P + AC+ + D+ K +H +V + + + +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 202 GSSTVDMYGKCGE-------------------------------IKNARKVFDEMPERNV 230
++ V+ Y CGE +K AR FD+MP R+
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
+SW+ MI Y G +L++F+E + ++FT SV+ C + LE+G I
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
K KCG E A +VF++ R+ W +M++ A + +E
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVD 409
K+F +M+++ ++P+ IT+L +L AC+H G++D+ +++F M+ D+ IEP HY MVD
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
+LGRAG ++EA +I++ MP+ P VWGA L RLH D +A AA +I EL + +
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
LL N + + D +KK G S IE H F AGD+SH
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 163/404 (40%), Gaps = 35/404 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFY-SKTQLPV-FSLQAFEEAQEKSATTWSSVISSLA 140
+Q+H+ I + P L F+ S+ V ++ + F + E W+++I +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-DIGKSIHAFVVKTGFDVDV 199
+ + + + M+ + + PD H FP + G GK +H VVK G ++
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+V ++ V MY CG + AR VFD + +V SW+ MI Y + E E +++L E
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+S T V+ C +L +++H + + CG ++ A
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 320 SRV-------------------------------FNEAPIRNLGMWNSMLIACAQHAHTE 348
R+ F++ P+R+ W M+ +
Sbjct: 291 VRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFN 350
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
E ++F M++ GM P+ T + +L AC+H G ++ G+ + I+ ++
Sbjct: 351 ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALI 410
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
D+ + G ++A + M + + W A + G +G + A
Sbjct: 411 DMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEA 453
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 236/471 (50%), Gaps = 37/471 (7%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQ-LPVF-SLQAFEEAQEKSATTWSSVISSLA 140
+ +H HI K L S V + LI+ YS+ L V +++ FE+ E+ +W+S++ L
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV 196
Query: 141 Q-----------NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-DIGKSIHA 188
+ +E+P R +I N D + RC ++ K+
Sbjct: 197 KAGELRDARRLFDEMPQ------RDLISWNTMLDGY------------ARCREMSKAFEL 238
Query: 189 FVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP--ERNVVSWSGMICAYALLGED 246
F + + + S+ V Y K G+++ AR +FD+MP +NVV+W+ +I YA G
Sbjct: 239 F--EKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
+ A +L + + L + S++ C S LL LG +IH + +++
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 307 XXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNF 366
KCG ++ A VFN+ P ++L WN+ML H H +E +LF RM+ G+RP+
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 367 ITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
+TF+ +L +C+H GLID+G YF M K Y + P +HY +VDLLGR G+L+EA+ +++
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQ 476
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXX 485
MP+EP +WGA L CR+H + ++A D + +L G LLSN
Sbjct: 477 TMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEG 536
Query: 486 XXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGI 536
++ GV+K +G S +E + +H F D+SH K+ + +G +
Sbjct: 537 VADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 13/374 (3%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q+HA II+ +L ++ LI+ S + +++ F + QE + +S+I + AQN
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
P A F +M + D+ +P +KAC+ + K +H + K G D++V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 203 SSTVDMYGKCG--EIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
++ +D Y +CG +++A K+F++M ER+ VSW+ M+ GE +A +LF E D
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
L + R S EL ++ + K G +E A
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMP--------ERNTVSWSTMVMGYSKAGDMEMAR 267
Query: 321 RVFNEAPI--RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
+F++ P+ +N+ W ++ A+ +E +L D+M G++ + + +L AC+
Sbjct: 268 VMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL+ G + ++K + A ++D+ + G L++A D+ +P + S W
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS-WNT 386
Query: 439 FLTGCRLHGDAELA 452
L G +HG + A
Sbjct: 387 MLHGLGVHGHGKEA 400
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +IH+ + +S+L S V + L++ Y+K + F + +K +W++++ L
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV 393
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV--DV 199
+ AIE F +M + IRPD F + + +C G D G + + ++ +D+ V
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQV 452
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEAL 257
VD+ G+ G +K A KV MP E NVV W ++ A + N + + KE L
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM----HNEVDIAKEVL 507
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 227/467 (48%), Gaps = 39/467 (8%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IHA IIK+ Q +S L+ + K ++ Q F+E + + + ++ +IS +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC-----DIGKSIHAFVVKTGFD 196
+ L + ++M + D + +KA G + + +HA ++K +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
+D + ++ VD Y K G++++AR VF+ M + NVV + MI Y G E+A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 257 LLEDLSV--------------------------------NDFTFSSVIRVCGNSTLLELG 284
++D+ V N TF+SVI C T E+G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 285 RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQH 344
+Q+H +K+ KCG I A RVF++ +N+ W SM+ ++
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEPGAQH 403
+ EE +LF RMK + PN++TFL L ACSH GL+DKG + F + +DY ++P +H
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL- 462
YA +VDL+GRAG L +A + +AMP P +W A L+ C LHG+ ELA+ AA +F+L
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 463 GHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEE 509
G + LSN ++++ R + K G SW E
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSE 519
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 221/439 (50%), Gaps = 5/439 (1%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID 158
V L++ Y K + + +EK +++I +Q + A++ F+ M+++
Sbjct: 202 FVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE 261
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
++P+++ + S + +C L GK IH +VK+GF+ + +S + MY +C + ++
Sbjct: 262 KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDS 321
Query: 219 RKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNS 278
+VF + N VSW+ +I G +E AL F++ + + + N FT SS +R C N
Sbjct: 322 LRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNL 381
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
+ E GRQIHG+ K +D KCG + A VF+ ++ N+M+
Sbjct: 382 AMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMI 441
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIE 398
+ AQ+ E LF+RM N+G++PN +T L +L AC++ L+++G + F + I
Sbjct: 442 YSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIM 501
Query: 399 PGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADR 458
HYA MVDLLGRAG+L+EA +++ I P +W L+ C++H E+A +
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRK 560
Query: 459 IFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAA 518
I E+ G +L+SN ++D +KK +SW+E HTF A
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620
Query: 519 GDR-SH---EKAKRNLSEI 533
GD SH E+ NL E+
Sbjct: 621 GDLFSHPNSEQILENLEEL 639
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 171/334 (51%), Gaps = 2/334 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ I AH++KS + + L++ K ++ Q F+ E+ TW+S+I+ L ++
Sbjct: 85 KTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-DVFV 201
A+E +R MI +N+ PD++ S KA + L + H V G +V +VFV
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS+ VDMY K G+ + A+ V D + E++VV + +I Y+ GED A+K F+ L+E +
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N++T++SV+ CGN + G+ IHGL +K+ ++ +C +++ + R
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF N W S++ Q+ E F +M ++PN T L CS+ +
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAG 415
++G+Q G++ YG + + ++DL G+ G
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 134/267 (50%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH ++KS +S L+ Y + L SL+ F+ + + +W+S+IS L Q
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQ 345
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N +A+ FR+M+ D+I+P+ SA++ C+ L + G+ IH V K GFD D +
Sbjct: 346 NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA 405
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS +D+YGKCG AR VFD + E +V+S + MI +YA G AL LF+ + L
Sbjct: 406 GSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGL 465
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
ND T SV+ C NS L+E G ++ K + G +E A
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEM 525
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTE 348
+ E +L +W ++L AC H E
Sbjct: 526 LTTEVINPDLVLWRTLLSACKVHRKVE 552
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 229/494 (46%), Gaps = 43/494 (8%)
Query: 85 IHAHIIKSSLQSIPLVSHHLI-------NFYSKTQLPVFSLQAFEEAQEKSATTWSSVIS 137
IH ++++ L S V+ L+ F T L ++ F + Q + ++ +I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+ PS A ++ QM+ I PD+ FP IKA + + +G+ H+ +V+ GF
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE-- 255
DV+V +S V MY CG I A ++F +M R+VVSW+ M+ Y G ENA ++F E
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 256 -----------------------------ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
E + N+ SVI C + LE G +
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
+ +K+ +CG IE A VF P + W+S++ A H H
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ-YFGLMKDYGIEPGAQHYA 405
+ F +M ++G P +TF +L ACSHGGL++KG + Y + KD+GIEP +HY
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHV 465
+VD+LGRAGKL EA + I M ++P + GA L C+++ + E+A + + ++
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE 450
Query: 466 SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHE- 524
SG VLLSN M++++ VKK G S IE +++ F GD
Sbjct: 451 HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
Query: 525 ---KAKRNLSEIGG 535
K +R EI G
Sbjct: 511 EMGKIRRKWEEILG 524
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 129/320 (40%), Gaps = 39/320 (12%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDM------YGK-CGEIKNARKVFDEMPERNVVSWSGM 236
K IH F+++T DVFV S + + + K + A +F ++ N+ ++ +
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
I ++ E A + + L + ++ TF +I+ + +G Q H ++ +
Sbjct: 89 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF 148
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRV-------------------------------FNE 325
CG I AA R+ F+E
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 326 APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKG 385
P RNL W+ M+ A++ E+ LF+ MK G+ N + ++ +C+H G ++ G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 386 QQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRL 445
++ + + + +VD+ R G +++A+ + + +P E W + + G +
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAV 327
Query: 446 HGDAELAAFAADRIFELGHV 465
HG A A ++ LG +
Sbjct: 328 HGHAHKAMHYFSQMISLGFI 347
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 226/452 (50%), Gaps = 8/452 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQIH +K + VS+ L+ Y++T + F E +W+S+I +LA+
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 142 NE--LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+E LP A+ F + + F S + A + L ++GK IH +K +
Sbjct: 494 SERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALL 258
++ + YGKCGE+ K+F M ER + V+W+ MI Y AL L L
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
++ F +++V+ + LE G ++H ++ + KCG ++
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR-PNFITFLCLLYACS 377
A R FN P+RN WNSM+ A+H EE KLF+ MK G P+ +TF+ +L ACS
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS 732
Query: 378 HGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
H GL+++G ++F M D YG+ P +H++ M D+LGRAG+L + D I+ MP++P +W
Sbjct: 733 HAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIW 792
Query: 437 GAFLTG-CRLHG-DAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLR 494
L CR +G AEL AA+ +F+L ++ VLL N K ++
Sbjct: 793 RTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMK 852
Query: 495 DRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
D VKKE G SW+ + VH F AGD+SH A
Sbjct: 853 DADVKKEAGYSWVTMKDGVHMFVAGDKSHPDA 884
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 180/378 (47%), Gaps = 10/378 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPL-VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
KG+++H H+I + L + + + L+N Y+K + + F +K + +W+S+I+ L
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
QN A+E ++ M +I P S++ +CA L +G+ IH +K G D++V
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGED-ENALKLFKEALL 258
V ++ + +Y + G + RK+F MPE + VSW+ +I A A A+ F A
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+N TFSSV+ + + ELG+QIHGL LK + KCG ++
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDG 570
Query: 319 ASRVFNE-APIRNLGMWNSMLIACAQHAHTEEVFKLFDR---MKNVGMRPNFITFLCLLY 374
++F+ A R+ WNSM+ + + H E + K D M G R + + +L
Sbjct: 571 CEKIFSRMAERRDNVTWNSMI---SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
A + +++G + +E + +VD+ + G+L AL MP+ + S
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 687
Query: 435 VWGAFLTGCRLHGDAELA 452
W + ++G HG E A
Sbjct: 688 -WNSMISGYARHGQGEEA 704
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 17/371 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-FSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH + K S +VS+ LI+ Y K V ++L AF + + K++ +W+S+IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG--KSIHAFVVKTGFDVD 198
Q A F M D RP ++ F S + L D+ + I + K+G D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA-L 257
+FVGS V + K G + ARKVF++M RN V+ +G++ E A KLF +
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 258 LEDLS-------VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY-DXXXXXXXXXXXX 309
+ D+S ++ F S+ G L+ GR++HG + T D
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVG----LKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 310 XXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITF 369
KCG I A RVF ++ WNSM+ Q+ E + + M+ + P T
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 370 LCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI 429
+ L +C+ GQQ G GI+ ++ L G L E I +MP
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP- 477
Query: 430 EPTESVWGAFL 440
E + W + +
Sbjct: 478 EHDQVSWNSII 488
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 169 SAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
S +++C +G + H+ + K D DV++ ++ ++ Y + G+ +ARKVFDEMP R
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCG--NSTLLELGRQ 286
N VSW+ ++ Y+ GE + AL ++ + E + N + F SV+R C S + GRQ
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKC-GVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
IHGL K SY KC G + A F + ++N WNS++ +Q
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLL-YACS 377
F++F M+ G RP TF L+ ACS
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 170/375 (45%), Gaps = 15/375 (4%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
H+ + K+ L + ++LIN Y +T V + + F+E ++ +W+ ++S ++N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI--GKSIHAFVVKTGFDVDVFVG 202
A+ + R M+ + I + + F S ++AC +G I G+ IH + K + VD V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 203 SSTVDMYGKC-GEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ + MY KC G + A F ++ +N VSW+ +I Y+ G+ +A ++F +
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 262 SVNDFTFSSVIRVCGNSTL--LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
++TF S++ + T + L QI K+ K G + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN-VGMRPNFITFLCLL----- 373
+VFN+ RN N +++ + EE KLF M + + + P +++ LL
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPE 320
Query: 374 YACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT-MVDLLGRAGKLQEALDIIKAMPIEPT 432
Y+ + + KG++ G + G+ +V++ + G + +A + M + +
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 433 ESVWGAFLTGCRLHG 447
S W + +TG +G
Sbjct: 381 VS-WNSMITGLDQNG 394
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G ++HA +++ L+S +V L++ YSK ++L+ F +++ +W+S+IS A
Sbjct: 637 RGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYA 696
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHI-FPSAIKACAILGRCDIG-KSIHAFVVKTGFDVD 198
++ A++ F M +D P DH+ F + AC+ G + G K + G
Sbjct: 697 RHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 756
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICA 239
+ S D+ G+ GE+ ++MP + NV+ W ++ A
Sbjct: 757 IEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 217/443 (48%), Gaps = 3/443 (0%)
Query: 81 KGQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
+G+ +H ++ L + +S L+ Y++ +++ W+S+IS
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLY 380
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
A + A+ FRQM+ I+PD S+I AC G +GK IH V++T D
Sbjct: 381 AHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DE 439
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FV +S +DMY K G + +A VF+++ R+VV+W+ M+C ++ G A+ LF
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
L +N+ TF +VI+ C + LE G+ +H L S KCG + AA
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHK-LIISGLKDLFTDTALIDMYAKCGDLNAA 558
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF R++ W+SM+ A H F++M G +PN + F+ +L AC H
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G +++G+ YF LMK +G+ P ++H+A +DLL R+G L+EA IK MP SVWG+
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
+ GCR+H ++ + + ++ +G LLSN ++ +K
Sbjct: 679 VNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLK 738
Query: 500 KETGLSWIEEGNRVHTFAAGDRS 522
K G S IE +V F AG+ +
Sbjct: 739 KVPGYSAIEIDQKVFRFGAGEEN 761
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 179/347 (51%), Gaps = 3/347 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ +H I + + + L+ YSK + S + FE+ +K+A +W+++ISS +
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV-F 200
E A+ F +MI I P+ S + +C ++G GKS+H F V+ D +
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ + V++Y +CG++ + V + +RN+V+W+ +I YA G AL LF++ + +
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + FT +S I C N+ L+ LG+QIHG ++T K G +++AS
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSAS 459
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VFN+ R++ WNSML +Q+ ++ E LFD M + + N +TFL ++ ACS G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
++KG+ + G++ A ++D+ + G L A + +AM
Sbjct: 520 SLEKGKWVHHKLIISGLKDLFTDTA-LIDMYAKCGDLNAAETVFRAM 565
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 178/381 (46%), Gaps = 5/381 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G ++H IIK + ++ L+ Y +T + + F+ + WS+++SS +
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A+ F+ M+ D + PD S ++ CA LG I +S+H + + FD+D +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY KCG++ ++ ++F+++ ++N VSW+ MI +Y E AL+ F E + +
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYD-XXXXXXXXXXXXXXKCGVIEAAS 320
N T SV+ CG L+ G+ +HG ++ D +CG +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
V RN+ WNS++ A + LF +M ++P+ T + AC + G
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 381 LIDKGQQYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+ G+Q G +++ + Q+ +++D+ ++G + A + + + W +
Sbjct: 420 LVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSM 476
Query: 440 LTGCRLHGDAELAAFAADRIF 460
L G +G++ A D ++
Sbjct: 477 LCGFSQNGNSVEAISLFDYMY 497
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 164/348 (47%), Gaps = 3/348 (0%)
Query: 83 QQIHAHI-IKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
Q+HAH+ + L+ PL LI Y+ P S FE + + +I
Sbjct: 18 SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVW 77
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACA-ILGRCDIGKSIHAFVVKTGFDVDVF 200
L AI+ + +++ + + +FPS ++ACA +G +H ++K G D D
Sbjct: 78 CHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV 137
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +S + MYG+ G + +A KVFD MP R++V+WS ++ + GE AL++FK + +
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + T SV+ C L + R +HG + +D KCG + ++
Sbjct: 198 VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSE 257
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+F + +N W +M+ + + +E+ + F M G+ PN +T +L +C G
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYA-TMVDLLGRAGKLQEALDIIKAM 427
LI +G+ G ++P + + +V+L GKL + +++ +
Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVV 365
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 214/435 (49%), Gaps = 11/435 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +H + + + +V +++ Y+K++ +++ + F+ +K+ TWS++I
Sbjct: 223 EGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 141 QNELPSLAIEYFRQMII-DNIRPDDHIFPSAIK----ACAILGRCDIGKSIHAFVVKTGF 195
+NE+ A E F QM++ DN+ + P AI CA G G+ +H + VK GF
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVA---MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
+D+ V ++ + Y K G + +A + F E+ ++V+S++ +I + E + +LF E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ + T V+ C + L G HG C+ Y KCG
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
++ A RVF+ R++ WN+ML H +E LF+ M+ G+ P+ +T L +L A
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 376 CSHGGLIDKGQQYFGLMK--DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
CSH GL+D+G+Q F M D+ + P HY M DLL RAG L EA D + MP EP
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Query: 434 SVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKML 493
V G L+ C + +AEL + ++ LG + + VLLSN +
Sbjct: 580 RVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQ 638
Query: 494 RDRGVKKETGLSWIE 508
+ RG+ K G SW++
Sbjct: 639 KKRGLLKTPGYSWVD 653
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 175/371 (47%), Gaps = 13/371 (3%)
Query: 82 GQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK--SATTWSSVISS 138
GQ IH H++K SL S V +L Y+ + F+E + W +I +
Sbjct: 18 GQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRA 77
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
A N+ A++ + +M+ +RP + +P +KACA L D GK IH+ V + F D
Sbjct: 78 YASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATD 137
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA-L 257
++V ++ VD Y KCGE++ A KVFDEMP+R++V+W+ MI ++L + + LF +
Sbjct: 138 MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR 197
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
++ LS N T + G + L G+ +HG C + + K I
Sbjct: 198 IDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCII 257
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM---KNVGMRPNFITFLCLLY 374
A RVF+ +N W++M+ ++ +E ++F +M NV M L +L
Sbjct: 258 YARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL-ILM 316
Query: 375 ACSHGGLIDKGQ--QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
C+ G + G+ + + + ++ Q+ T++ + G L +A + ++
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFILDLTVQN--TIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 433 ESVWGAFLTGC 443
S + + +TGC
Sbjct: 375 IS-YNSLITGC 384
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 211/455 (46%), Gaps = 48/455 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H +K L+S V LI Y F+ + F+E + + W++VI++ +
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A E F +M++ N T ++V +
Sbjct: 185 GNDVAGAREIFDKMLVRN--------------------------------HTSWNV-MLA 211
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G Y K GE+++A+++F EMP R+ VSWS MI A G + F+E +
Sbjct: 212 G------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
S N+ + + V+ C S E G+ +HG K Y +CG + A
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 322 VF-NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF R + W SM+ A H EE +LF+ M G+ P+ I+F+ LL+ACSH G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
LI++G+ YF MK Y IEP +HY MVDL GR+GKLQ+A D I MPI PT VW
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L C HG+ ELA R+ EL +SG VLLSN K + + +K
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 500 KETGLSWIEEGNRVHTFAAGDR-------SHEKAK 527
K T S +E G ++ F AG++ +HEK K
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLK 540
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 20/276 (7%)
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCG-----EIKNARKVFDEMPERNVVSWSGMICAY 240
IH +K G D D + T + C + AR++ PE + ++ ++ Y
Sbjct: 24 IHGLFIKYGVDTDSYF---TGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGY 80
Query: 241 ALLGEDENALKLFKEALLEDLSVND-FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXX 299
+ E N++ +F E + + D F+F+ VI+ N L G Q+H LK +
Sbjct: 81 SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESH 140
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
CG +E A +VF+E NL WN+++ AC + ++FD+M
Sbjct: 141 LFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM-- 198
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
+ N ++ +L G ++ ++ F M ++TM+ + G E
Sbjct: 199 --LVRNHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSWSTMIVGIAHNGSFNE 252
Query: 420 ALDIIKAMP---IEPTESVWGAFLTGCRLHGDAELA 452
+ + + + P E L+ C G E
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 12/386 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSAT--TWSSVISSL 139
G ++H I L++ +S L+ Y+ + + F+ ++ ++ W+S+IS
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
A+ A+ + QM D ++PD FP +KAC +G IG++IH +VK GF DV
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+V ++ V MY KCG+I AR VFD +P ++ VSW+ M+ Y G AL +F+ +
Sbjct: 231 YVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN 290
Query: 260 DLSVNDFTFSSVI-RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
+ + SSV+ RV + GRQ+HG ++ + K G +
Sbjct: 291 GIEPDKVAISSVLARVLS----FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQ 346
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +F++ R+ WN+++ A H+ K F++M +P+ ITF+ +L C++
Sbjct: 347 ACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403
Query: 379 GGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALD-IIKAMPIEPTESVW 436
G+++ G++ F LM K+YGI+P +HYA MV+L GRAG ++EA I++ M +E +VW
Sbjct: 404 TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVW 463
Query: 437 GAFLTGCRLHGDAELAAFAADRIFEL 462
GA L C LHG+ ++ AA R+FEL
Sbjct: 464 GALLYACYLHGNTDIGEVAAQRLFEL 489
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 236/501 (47%), Gaps = 21/501 (4%)
Query: 15 TLSKILTNLLVERIKPELKPQQTPLNQPVFEQNYKPPQNLNQFSFEEKYRHICEXXXXXX 74
LS N L+ KP+ T F N P + F+F ++
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSP---DMFTFPPVFK-------ACG 117
Query: 75 XXXXXXKGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSS 134
+G+QIH + K V + L++FY + + F E + +W+
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTG 177
Query: 135 VISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
+I+ + L A++ F +M ++ P+ + + + +G +GK IH ++K
Sbjct: 178 IITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
+ + G++ +DMY KC ++ +A +VF E+ +++ VSW+ MI + A+ LF
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF- 293
Query: 255 EALLED---LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
+L++ + + +SV+ C + ++ GR +H L
Sbjct: 294 -SLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYA 352
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
KCG IE A +FN +N+ WN++L A H H E + F+ M +G +PN +TFL
Sbjct: 353 KCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLA 412
Query: 372 LLYACSHGGLIDKGQQYFGLMK--DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI 429
L AC H GL+D+G++YF MK +Y + P +HY M+DLL RAG L EAL+++KAMP+
Sbjct: 413 ALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
Query: 430 EPTESVWGAFLTGCRLHGD-AELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXX 488
+P + GA L+ C+ G EL D ++ SG+ VLLSN
Sbjct: 473 KPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVAR 532
Query: 489 XXKMLRDRGVKKETGLSWIEE 509
++++ +G+ K G S+IE+
Sbjct: 533 IRRLMKVKGISKVPGSSYIEK 553
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 7/368 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKT-QLPVFSLQAFEEAQEK-SATTWSSVISSLA 140
+QI +I L L+ + ++ F K+ +S + S+ ++++++SS A
Sbjct: 23 KQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYA 82
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P + I ++ + + PD FP KAC GK IH V K GF D++
Sbjct: 83 VCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIY 142
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S V YG CGE +NA KVF EMP R+VVSW+G+I + G + AL F + D
Sbjct: 143 VQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---D 199
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ N T+ V+ G L LG+ IHGL LK + KC + A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK-NVGMRPNFITFLCLLYACSHG 379
RVF E ++ WNSM+ ++E LF M+ + G++P+ +L AC+
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G +D G+ + GI+ +VD+ + G ++ AL+I + + + W A
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT-WNAL 378
Query: 440 LTGCRLHG 447
L G +HG
Sbjct: 379 LGGLAIHG 386
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 212/416 (50%), Gaps = 2/416 (0%)
Query: 94 LQSIPLVSHHLINFYSK-TQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYF 152
L S ++S L+ YSK L SL F ++ +W+ +I +++ S +I+ F
Sbjct: 43 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 102
Query: 153 RQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGK 211
+M ++ +RPDD P ++AC+ G IH +K GF +FV S+ V MY
Sbjct: 103 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 162
Query: 212 CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSV 271
G++ +ARK+FD+MP R+ V ++ M Y GE L +F+E +++ S+
Sbjct: 163 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 222
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNL 331
+ CG L+ G+ +HG C++ KC +++ A VF R++
Sbjct: 223 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 282
Query: 332 GMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGL 391
W+S+++ FKLFD M G+ PN +TFL +L AC+HGGL++K YF L
Sbjct: 283 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 342
Query: 392 MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAEL 451
M++Y I P +HYA++ D + RAG L+EA ++ MP++P E+V GA L+GC+++G+ E+
Sbjct: 343 MQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 402
Query: 452 AAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
A + +L + V L+ + ++++ + K G S I
Sbjct: 403 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 458
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 1/268 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G IH +K S VS L+ Y + + + F++ + + ++++ Q
Sbjct: 134 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 193
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L + FR+M D + S + AC LG GKS+H + ++ + + +
Sbjct: 194 QGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL 253
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G++ DMY KC + A VF M R+V+SWS +I Y L G+ + KLF E L E +
Sbjct: 254 GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI 313
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N TF V+ C + L+E L + + + G++E A +
Sbjct: 314 EPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEK 373
Query: 322 VFNEAPIR-NLGMWNSMLIACAQHAHTE 348
+ P++ + + ++L C + + E
Sbjct: 374 FLEDMPVKPDEAVMGAVLSGCKVYGNVE 401
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 224/482 (46%), Gaps = 37/482 (7%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINF----YSKTQLPVFSLQAFEEAQEKSATTWSSVISS 138
+QIHA ++K+ L ++F S LP ++ F+ W+ +I
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP-YAQIVFDGFDRPDTFLWNLMIRG 89
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
+ ++ P ++ +++M+ + + + FPS +KAC+ L + IHA + K G++ D
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPE------------------------------- 227
V+ +S ++ Y G K A +FD +PE
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
+N +SW+ MI Y ++ AL+LF E D+ ++ + ++ + C LE G+ I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
H KT KCG +E A VF +++ W +++ A H H
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ-YFGLMKDYGIEPGAQHYAT 406
E F M+ +G++PN ITF +L ACS+ GL+++G+ ++ + +DY ++P +HY
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVS 466
+VDLLGRAG L EA I+ MP++P +WGA L CR+H + EL + + +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 467 SGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKA 526
G V +N ++++++GV K G S I H F AGDRSH +
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEI 509
Query: 527 KR 528
++
Sbjct: 510 EK 511
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ IH+++ K+ ++ ++ LI+ Y+K +L+ F+ ++KS W+++IS A
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ AI F +M I+P+ F + + AC+ G + GK I + ++ +++
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPT 383
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICA 239
+ VD+ G+ G + A++ EMP + N V W ++ A
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 228/465 (49%), Gaps = 8/465 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q H +K L S V + L+ YS +++ ++ + +SS +S
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ ++ R+ ++ ++ + S+++ + L ++ +H+ +V+ GF+ +V
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ ++MYGKCG++ A++VFD+ +N+ + ++ AY E AL LF + ++
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ N++TF+ ++ +LL+ G +HGL LK+ Y K G IE A
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+ F+ R++ WN+M+ C+ H E + FDRM G PN ITF+ +L ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 381 LIDKGQQYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+++G YF LMK + ++P QHY +V LL +AG ++A D ++ PIE W
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L C + + L A+ E SG+ VLLSN ++ +RGVK
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH-------EKAKRNLSEIGGIG 537
KE G+SWI N+ H F A D H K K +S+I +G
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLG 618
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 171/388 (44%), Gaps = 5/388 (1%)
Query: 82 GQQIHAHII---KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS 138
G+ IHAH+I +SS + LIN Y K + V + + F+ E++ +W +++
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 139 LAQNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+ ++ F+ M RP++ + K+C+ GR + GK H +K G
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
FV ++ V MY C A +V D++P ++ +S + Y G + L + ++
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTA 229
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
ED N+ T+ S +R+ N L L Q+H ++ ++ KCG +
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A RVF++ +N+ + +++ A Q EE LF +M + PN TF LL + +
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
L+ +G GL+ G +V++ ++G +++A M + W
Sbjct: 350 ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVT-WN 408
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHV 465
++GC HG A A DR+ G +
Sbjct: 409 TMISGCSHHGLGREALEAFDRMIFTGEI 436
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 121/277 (43%), Gaps = 7/277 (2%)
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDV---DVFVGSSTVDMYGKCGEIKNARKVFDEMPE 227
+K CA IG+SIHA ++ T D + +S +++Y KC E ARK+FD MPE
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLS-VNDFTFSSVIRVCGNSTLLELGRQ 286
RNVVSW M+ Y G D LKLFK S N+F + V + C NS +E G+Q
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
HG LK C A RV ++ P +L +++S L +
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
+E + + N N +T+L L S+ ++ Q M +G +
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGA 277
Query: 407 MVDLLGRAGKL---QEALDIIKAMPIEPTESVWGAFL 440
++++ G+ GK+ Q D A I ++ A+
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 5/179 (2%)
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKT---SYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
+ +++VC NS+ L +G IH + T S KC A ++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGGLID 383
P RN+ W +M+ EV KLF M G RPN + +CS+ G I+
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 384 KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+G+Q+ G YG+ T+V + EA+ ++ +P SV+ + L+G
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL-SVFSSALSG 211
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 211/431 (48%), Gaps = 2/431 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G IH +K+ L V+ L+ Y++ + + F+E +++ W ++ +
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF-DVDVF 200
F M + D +KAC + +GK +H ++ F D +
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +S +DMY KC + NARK+F+ +RNVV W+ +I +A A LF++ L E
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ N T ++++ C + L G+ +HG ++ + +CG I+ A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF+ P RN+ W+SM+ A + EE F +MK+ + PN +TF+ LL ACSH G
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 381 LIDKG-QQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ +G +Q+ + +DYG+ P +HYA MVDLLGRAG++ EA I MP++P S WGA
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+ CR+H + +LA A+++ + S + VLLSN + + +G +
Sbjct: 488 LSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYR 547
Query: 500 KETGLSWIEEG 510
K G S E G
Sbjct: 548 KHVGQSATEVG 558
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 185/374 (49%), Gaps = 14/374 (3%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEE--AQEKSATTWSSVISSLA 140
QQ+HA +I + ++ L N Y ++ F+ +F +++ +W++++S +
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 141 QNE---LPSLAIEYFR-QMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
+++ + + Y R + D + + +F AIKAC LG + G IH +K G D
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVF--AIKACVGLGLLENGILIHGLAMKNGLD 141
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
D +V S V+MY + G +++A+KVFDE+P RN V W ++ Y +D +LF
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF--C 199
Query: 257 LLED--LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKC 313
L+ D L+++ T +++ CGN ++G+ +HG+ ++ S+ D KC
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 314 GVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLL 373
+++ A ++F + RN+ MW +++ A+ E F LF +M + PN T +L
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 374 YACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
+CS G + G+ G M GIE A ++ + +D+ R G +Q A + MP E
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNV 378
Query: 434 SVWGAFLTGCRLHG 447
W + + ++G
Sbjct: 379 ISWSSMINAFGING 392
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 231/504 (45%), Gaps = 66/504 (13%)
Query: 87 AHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPS 146
A +IK+SL + + I + + ++ + QE + ++++ P
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 147 LAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTV 206
++E + +M+ D++ P + + S +KA + R G+S+ A + K GF V + ++ +
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLI 166
Query: 207 DMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL------------------------ 242
D Y G I+ ARKVFDEMPER+ ++W+ M+ AY
Sbjct: 167 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 226
Query: 243 -------LGEDENALKLFKEALLEDLSV-------------------------------N 264
LG E A LF + ++D+ +
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
+ T S+VI C + +LE+G+++H L+ + KCG +E A VF
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 346
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
P +NL WNS++ A H +E K+F +M+ ++PN +TF+ + AC+H GL+D+
Sbjct: 347 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 406
Query: 385 GQQ-YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
G++ Y ++ DY I +HY MV L +AG + EAL++I M EP +WGA L GC
Sbjct: 407 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 466
Query: 444 RLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKET- 502
R+H + +A A +++ L ++SG LL + +R+ G++K
Sbjct: 467 RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICP 526
Query: 503 GLSWIEEGNRVHTFAAGDRSHEKA 526
G S I R H FAA D+SH +
Sbjct: 527 GTSSIRIDKRDHLFAAADKSHSAS 550
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++H + +++ + L++ YSK +L F +K+ W+S+I LA
Sbjct: 306 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA 365
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A++ F +M +++++P+ F S AC G D G+ I+ + +D +
Sbjct: 366 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM------IDDYS 419
Query: 202 GSSTVDMYG-------KCGEIKNARKVFDEMP-ERNVVSWSGMI 237
S V+ YG K G I A ++ M E N V W ++
Sbjct: 420 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 463
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 211/447 (47%), Gaps = 39/447 (8%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H I+KS ++ V LI+ Y+K + + E + +W+S+I +
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD--IGKSIHAFVVKTGFDVDV 199
L A+ F +M +++ DD PS I C L R + I S H +VKTG+
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPS-ILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V ++ VDMY K G + +A KVF+ M E++V+SW+ ++ G + ALKLF +
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
++ + +SV+ TLLE G+Q+HG +K+ + KCG +E A
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+ +FN IR+L IT+ CL+ +
Sbjct: 485 NVIFNSMEIRDL-----------------------------------ITWTCLIVGYAKN 509
Query: 380 GLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL++ Q+YF M+ YGI PG +HYA M+DL GR+G + ++ M +EP +VW A
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L R HG+ E AA + EL ++ V LSN ++++ R +
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEK 525
KE G SW+EE +VH+F + DR H +
Sbjct: 630 SKEPGCSWVEEKGKVHSFMSEDRRHPR 656
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 189/390 (48%), Gaps = 3/390 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQ-EKSATTWSSVISSL 139
+G+QIH H IK+ V + L+ Y++ + + FE + EK+ TW+S+++
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY 202
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+QN AIE FR + + + + + FPS + ACA + C +G +H +VK+GF ++
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+V S+ +DMY KC E+++AR + + M +VVSW+ MI G AL +F
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 260 DLSVNDFTFSSVIRVCGNS-TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
D+ ++DFT S++ S T +++ H L +KT Y K G++++
Sbjct: 323 DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +VF +++ W +++ + +E KLF M+ G+ P+ I +L A +
Sbjct: 383 ALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
L++ GQQ G G ++V + + G L++A I +M I + W
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT-WTC 501
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSG 468
+ G +G E A D + + ++ G
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSMRTVYGITPG 531
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 27/371 (7%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I YS ++ + + F K+ +W+++IS ++ A F +M D I+P+
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
++ S ++ C L G+ IH +KTGFD+DV V + + MY +C I A +F+
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 224 EMP-ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE 282
M E+N V+W+ M+ Y+ G A++ F++ E N +TF SV+ C + +
Sbjct: 185 TMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACR 244
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
+G Q+H +K+ + KC +E+A + + ++ WNSM++ C
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 343 QHAHTEEVFKLFDRMKNVGMR------PNFITFLCL------LYACSHGGLIDKGQQYFG 390
+ E +F RM M+ P+ + L + + +H ++ G +
Sbjct: 305 RQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 391 LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG--D 448
L+ + +VD+ + G + AL + + M IE W A +TG +G D
Sbjct: 365 LVNN-----------ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYD 412
Query: 449 AELAAFAADRI 459
L F R+
Sbjct: 413 EALKLFCNMRV 423
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 40/298 (13%)
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER-------------- 228
G IH++ +T ++ +G + K G + AR++FD+MPER
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDLS-----KSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 229 -----------------NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSV 271
N +SW+ +I Y G A LF E + + N++T SV
Sbjct: 72 SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSV 131
Query: 272 IRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN--EAPIR 329
+R+C + LL G QIHG +KT +D +C I A +F E
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 330 NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF 389
N+ W SML +Q+ + + F ++ G + N TF +L AC+ G Q
Sbjct: 192 NV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 390 GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
+ G + + ++D+ + +++ A +++ M ++ S W + + GC G
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQG 307
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 213/417 (51%), Gaps = 22/417 (5%)
Query: 121 FEEAQE-------KSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKA 173
FE+AQ K A +W+++I+ A+ A E F M+ N + + I+
Sbjct: 54 FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE- 112
Query: 174 CAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVS 232
C D+ K+ H F K V ++ + Y K +++ A +F +M +N+V+
Sbjct: 113 CG-----DLEKASHFF--KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 165
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
W+ MI Y E+ LKLF+ L E + N SS + C + L+LGRQIH +
Sbjct: 166 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 225
Query: 293 KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFK 352
K++ KCG + A ++F +++ WN+M+ AQH + ++
Sbjct: 226 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 285
Query: 353 LFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEPGAQHYATMVDLL 411
LF M + +RP++ITF+ +L AC+H GL++ G YF +++DY +EP HY MVDLL
Sbjct: 286 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 345
Query: 412 GRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNV 471
GRAGKL+EAL +I++MP P +V+G L CR+H + ELA FAA+++ +L ++ V
Sbjct: 346 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 405
Query: 472 LLSNXXXXXXXXXXXXXXXKMLRDRGVKKET-----GLSWIEEGNRVHTFAAGDRSH 523
L+N K +++ V K G SWIE N+VH F + DR H
Sbjct: 406 QLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIH 462
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
D F + + Y + + A+ FD MP ++ SW+ MI YA GE E A +LF ++
Sbjct: 37 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY-SM 95
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+E V+ S CG+ LE K + K +E
Sbjct: 96 MEKNEVSWNAMISGYIECGD---LEKASHF----FKVAPVRGVVAWTAMITGYMKAKKVE 148
Query: 318 AASRVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
A +F + + +NL WN+M+ +++ E+ KLF M G+RPN L C
Sbjct: 149 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 208
Query: 377 SHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
S + G+Q ++ + +++ + + G+L +A + + M + + W
Sbjct: 209 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA-W 267
Query: 437 GAFLTGCRLHGDAELA 452
A ++G HG+A+ A
Sbjct: 268 NAMISGYAQHGNADKA 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH + KS+L + LI+ Y K + + FE ++K W+++IS AQ
Sbjct: 217 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 276
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+ FR+MI + IRPD F + + AC G +IG + +V+ + V+
Sbjct: 277 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD-YKVEPQP 335
Query: 202 GSST--VDMYGKCGEIKNARKVFDEMPER 228
T VD+ G+ G+++ A K+ MP R
Sbjct: 336 DHYTCMVDLLGRAGKLEEALKLIRSMPFR 364
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 216/444 (48%), Gaps = 2/444 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G QIH IKS L + L + Y++ + + F++ + +W+ +I+ LA
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A+ F QM PD S + A G IH++++K GF D+ V
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALLED 260
+S + MY C ++ +F++ + VSW+ ++ A + L+LFK L+ +
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ T +++R C + L+LG Q+H LKT KCG + A
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+F+ R++ W+++++ AQ EE LF MK+ G+ PN +TF+ +L ACSH G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 381 LIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++G + + M+ ++GI P +H + +VDLL RAG+L EA I M +EP VW
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+ C+ G+ LA AA+ I ++ +S +VLL + ++ VK
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH 523
K G SWIE +++H F A D H
Sbjct: 709 KIPGQSWIEIEDKIHIFFAEDIFH 732
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 178/367 (48%), Gaps = 1/367 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G++IH HI+ S+ + ++++H+++ Y K + + F+ E++ +++SVI+ +
Sbjct: 85 QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS 144
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN + AI + +M+ +++ PD F S IKACA +GK +HA V+K +
Sbjct: 145 QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-LE 259
++ + MY + ++ +A +VF +P ++++SWS +I ++ LG + AL KE L
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N++ F S ++ C + + G QIHGLC+K+ +CG + +A
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RVF++ + WN ++ A + + +E +F +M++ G P+ I+ LL A +
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ +G Q + +G +++ + L ++ + W
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTI 444
Query: 440 LTGCRLH 446
LT C H
Sbjct: 445 LTACLQH 451
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 167 FPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
+ S I AC+ G+ IH ++ + D + + + MYGKCG +++AR+VFD MP
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 227 ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
ERN+VS++ +I Y+ G+ A++L+ + L EDL + F F S+I+ C +S+ + LG+Q
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
+H +K + + ASRVF P+++L W+S++ +Q
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 347 TEEVFKLFDRMKNVGM-RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
E M + G+ PN F L ACS D G Q GL + A
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
++ D+ R G L A + + P + W + G +G A+ A
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEA 355
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKS-ATTWSSVISSL 139
+G QIH++IIK + V + L+ Y+ FE+ + + + +W++++++
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
Q+E P + F+ M++ PD + ++ C + +G +H + +KTG +
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
F+ + +DMY KCG + AR++FD M R+VVSWS +I YA G E AL LFKE
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX--XXXXXXXXKCGVIE 317
+ N TF V+ C + L+E G +++ ++T + + G +
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYAT-MQTEHGISPTKEHCSCVVDLLARAGRLN 627
Query: 318 AASRVFNEAPIR-NLGMWNSMLIAC 341
A R +E + ++ +W ++L AC
Sbjct: 628 EAERFIDEMKLEPDVVVWKTLLSAC 652
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 267 TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA 326
T+ S+I C +S L GR+IH L ++ KCG + A VF+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
P RNL + S++ +Q+ E +L+ +M + P+ F ++ AC+ + G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 387 QYFGLMKDYGIEPGAQHYA--TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
Q + +E + A ++ + R ++ +A + +P++ S W + + G
Sbjct: 189 QLHA--QVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLIS-WSSIIAG 243
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 213/453 (47%), Gaps = 34/453 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IH K L S V + L++ Y K + +E + +W+S++ AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A+E R+M I D S + A V
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPA---------------------------V 251
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++T + + + +F +M ++++VSW+ MI Y A++L+ +
Sbjct: 252 SNTTTE------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ + +SV+ CG+++ L LG++IHG + KCG +E A
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF R++ W +M+ A + LF ++++ G+ P+ I F+ L ACSH GL
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++G+ F LM D Y I P +H A MVDLLGRAGK++EA I+ M +EP E VWGA L
Sbjct: 426 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR+H D ++ AAD++F+L SG VLLSN +++ +G+KK
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEI 533
G S +E +HTF GDRSH ++ E+
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 160/365 (43%), Gaps = 34/365 (9%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +H+ II L+ + L+ Y+ + + + F+E E++ + +I S N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
++ F M N+RPD + FP +KAC+ G IG+ IH K G +FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ V MYGKCG + AR V DEM R+VVSW+ ++ YA ++AL++ +E +S
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ T +S++ N+T + +
Sbjct: 239 HDAGTMASLLPAVSNTTTEN---------------------------------VMYVKDM 265
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F + ++L WN M+ ++A E +L+ RM+ G P+ ++ +L AC +
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
G++ G ++ + P ++D+ + G L++A D+ + M S W A ++
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMISA 384
Query: 443 CRLHG 447
G
Sbjct: 385 YGFSG 389
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 211/446 (47%), Gaps = 34/446 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IH K L S V + L++ Y K + +E + +W+S++ AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ A+E R+M I D S + A V
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPA---------------------------V 251
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++T + + + +F +M ++++VSW+ MI Y A++L+ +
Sbjct: 252 SNTTTE------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ + +SV+ CG+++ L LG++IHG + KCG +E A
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF R++ W +M+ A + LF ++++ G+ P+ I F+ L ACSH GL
Sbjct: 366 VFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+++G+ F LM D Y I P +H A MVDLLGRAGK++EA I+ M +EP E VWGA L
Sbjct: 426 LEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
CR+H D ++ AAD++F+L SG VLLSN +++ +G+KK
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 501 ETGLSWIEEGNRVHTFAAGDRSHEKA 526
G S +E +HTF GDRSH ++
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQS 571
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 160/365 (43%), Gaps = 34/365 (9%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +H+ II L+ + L+ Y+ + + + F+E E++ + +I S N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
++ F M N+RPD + FP +KAC+ G IG+ IH K G +FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ V MYGKCG + AR V DEM R+VVSW+ ++ YA ++AL++ +E +S
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ T +S++ N+T + +
Sbjct: 239 HDAGTMASLLPAVSNTTTEN---------------------------------VMYVKDM 265
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F + ++L WN M+ ++A E +L+ RM+ G P+ ++ +L AC +
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
G++ G ++ + P ++D+ + G L++A D+ + M S W A ++
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMISA 384
Query: 443 CRLHG 447
G
Sbjct: 385 YGFSG 389
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 236/494 (47%), Gaps = 37/494 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H I SS +S V + LI+ Y + + + + F+ E+ A +W++VI+ A
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 142 NELPSLAIEYFRQMIIDNI---------------RPDDHI-----------FPSAI---- 171
+ S A E F +M + + +++ FP+++
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 172 -----KACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
KAC+++G +GK IH + + +D V ++ + MY KC ++++A VF +
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 227 ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
E ++ +W+ +I YA L + E A L +E L+ N T +S++ +C L+ G++
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 287 IHGLCL-KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
H L + + K G I AA +V + R+ + S++
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHY 404
LF M G++P+ +T + +L ACSH L+ +G++ F M+ +YGI P QH+
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGH 464
+ MVDL GRAG L +A DII MP +P+ + W L C +HG+ ++ +AA+++ E+
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 465 VSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHE 524
+ G VL++N ++RD GVKK+ G +WI+ + F+ GD S
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Query: 525 KAKRNLSEIGGIGR 538
+A + G+ +
Sbjct: 643 EACNTYPLLDGLNQ 656
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 179/412 (43%), Gaps = 47/412 (11%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+HAH I S ++ ++ L+ FYS L + E + W+ +I+S A+
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
NEL I +++M+ IRPD +PS +KAC G+ +H + + + ++V
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ + MY + + AR++FD M ER+ VSW+ +I YA G A +LF + +
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241
Query: 262 SVNDFTFSSV-----------------------------------IRVCGNSTLLELGRQ 286
V+ T++ + ++ C + LG++
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
IHGL + +SYD KC + A VF + +L WNS++ AQ
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM------KDYGIEPG 400
+EE L M G +PN IT +L C+ + G+++ + KDY +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-- 419
Query: 401 AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ ++VD+ ++GK+ A + M + E + + + G G+ +A
Sbjct: 420 ---WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVA 467
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 25/290 (8%)
Query: 163 DDHIFPSA---IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
DD + SA + AC + G +HA + +G + + V Y A+
Sbjct: 39 DDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQ 98
Query: 220 KVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNST 279
+ + + + W+ +I +YA E + +K + + + + FT+ SV++ CG +
Sbjct: 99 SIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETL 158
Query: 280 LLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLI 339
+ GR +HG +SY + + A R+F+ R+ WN+++
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 340 ACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEP 399
A E F+LFD+M G+ + IT+ + GG + G
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNII-----SGGCLQTG-------------- 259
Query: 400 GAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+Y + L+ R +LD + + S+ GA G +HG A
Sbjct: 260 ---NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA 306
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 199/384 (51%), Gaps = 8/384 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H ++K L+S S L++FY K L V + + FE ++ W++++SS
Sbjct: 161 GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVL 220
Query: 142 NELPSLAIEYFRQMIIDN--IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N + A + M D R D F S + AC R + GK IHA + K + D+
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDI 276
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V ++ ++MY K + +AR+ F+ M RNVVSW+ MI +A GE A++LF + LLE
Sbjct: 277 PVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+L ++ TF+SV+ C + + +Q+ + K + G + A
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
F+ +L W S++ A A H EE ++F+ M ++P+ ITFL +L ACSHG
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHG 455
Query: 380 GLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL+ +G + F M + Y IE +HY ++DLLGRAG + EA D++ +MP EP+ A
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAA 515
Query: 439 FLTGCRLHGDAELAAFAADRIFEL 462
F GC +H E + A ++ E+
Sbjct: 516 FTGGCNIHEKRESMKWGAKKLLEI 539
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 12/375 (3%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ- 141
+Q H ++K + + + + L+ Y+K + + + F+E ++ TW+ +I + Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 142 ----NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
N L Y +++ ++ D F I+ C G +H +VK G +
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK--E 255
F +S V YGKCG I AR+VF+ + +R++V W+ ++ +Y L G + A L K
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ + FTFSS++ C +E G+QIH + K SY K
Sbjct: 236 SDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ A F +RN+ WN+M++ AQ+ E +LF +M ++P+ +TF +L +
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
C+ I + +Q ++ G +++ R G L EAL ++ EP
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVS 410
Query: 436 WGAFLTGCRLHGDAE 450
W + + HG AE
Sbjct: 411 WTSVIGALASHGFAE 425
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 14/277 (5%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALL 243
K H F+VK G +F+ + + Y K E +A K+FDEMP RN+V+W+ +I
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 244 GEDEN-----ALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
D N L D+S++ +F +IR+C +ST ++ G Q+H L +K +
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM- 357
KCG+I A RVF R+L +WN+++ + + +E F L M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 358 --KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAG 415
KN R ++ TF LL AC I++G+Q ++ + ++++ ++
Sbjct: 236 SDKN-RFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 416 KLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
L +A + ++M + S W A + G +G+ A
Sbjct: 291 HLSDARECFESMVVRNVVS-WNAMIVGFAQNGEGREA 326
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+QIHA + K S Q V+ L+N Y+K+ + + FE ++ +W+++I A
Sbjct: 259 QGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN A+ F QM+++N++PD+ F S + +CA K + A V K G +
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S + Y + G + A F + E ++VSW+ +I A A G E +L++F E++L+
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF-ESMLQK 437
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-----SYDXXXXXXXXXXXXXXKCGV 315
L + TF V+ C + L++ G + C K + + G
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLR----CFKRMTEFYKIEAEDEHYTCLIDLLGRAGF 493
Query: 316 IEAASRVFNEAP 327
I+ AS V N P
Sbjct: 494 IDEASDVLNSMP 505
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 205/404 (50%), Gaps = 17/404 (4%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+E +E++ TW+++I+ QN +A + F M + + S + + GR
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRI 250
Query: 181 DIGKSIHAFVVKTGFDV----DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
+ + F+V V ++ + +G+ GEI AR+VFD M +R+ +W GM
Sbjct: 251 EDAEEF--------FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
I AY G + AL LF + + + + + S++ VC L+ GRQ+H ++ +
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
D KCG + A VF+ +++ MWNS++ A H EE K+F
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAG 415
M + G PN +T + +L ACS+ G +++G + F M+ + + P +HY+ VD+LGRAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 416 KLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSN 475
++ +A+++I++M I+P +VWGA L C+ H +LA AA ++FE ++G VLLS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 476 XXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAG 519
K +R V K G SWIE G +VH F G
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+ F+ +++ TW +I + + A++ F QM +RP S + CA L
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMIC 238
G+ +HA +V+ FD DV+V S + MY KCGE+ A+ VFD ++++ W+ +I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI-HGLCLKTSYD 297
YA G E ALK+F E N T +++ C + LE G +I + K
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 298 XXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
+ G ++ A + I+ + +W ++L AC H+ +
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 19/350 (5%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
L++ Y K ++ V + FE E++ +W++++ Q + A F +M N
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW 144
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFV-VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
+F I GR D + ++ + VK DV ++ + + G + AR +F
Sbjct: 145 TVMFGGLIDD----GRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIF 195
Query: 223 DEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE 282
DEM ERNVV+W+ MI Y + A KLF E + E V +++S++ S +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEV---SWTSMLLGYTLSGRIE 251
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
+ + + G I A RVF+ R+ W M+ A
Sbjct: 252 DAEEF----FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
+ E LF +M+ G+RP+F + + +L C+ + G+Q + +
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 403 HYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ ++ + + G+L +A + + +W + ++G HG E A
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDI-IMWNSIISGYASHGLGEEA 416
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+HAH+++ V+ L+ Y K V + F+ K W+S+IS A
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L A++ F +M P+ + + AC+ G+ + G I +++ F V V
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE-SMESKFCVTPTV 468
Query: 202 G--SSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICA 239
S TVDM G+ G++ A ++ + M + + W ++ A
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 55/307 (17%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+ Q K+ +W+S++S N LP A + F +M N+ + + IK I+
Sbjct: 40 FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEAR 99
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
++ + + + +V ++ V Y + G + A +F MPERN VSW+ M
Sbjct: 100 NVFELMP--------ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGL 151
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXX 300
G + A KL+ + + V D S+ I GLC
Sbjct: 152 IDDGRIDKARKLY-----DMMPVKDVVAST--------------NMIGGLC--------- 183
Query: 301 XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
+ G ++ A +F+E RN+ W +M+ Q+ + KLF+ M
Sbjct: 184 -----------REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE- 231
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
+++ +L + G I+ +++F +M ++P A +V G G++ +A
Sbjct: 232 ---KTEVSWTSMLLGYTLSGRIEDAEEFFEVMP---MKPVIACNAMIVG-FGEVGEISKA 284
Query: 421 LDIIKAM 427
+ M
Sbjct: 285 RRVFDLM 291
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 214/446 (47%), Gaps = 2/446 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+ + + ++ V ++N Y K + F + ++ W+++++ A
Sbjct: 134 KGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFA 193
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q A+E++R+M + D + ++A LG +G+S+H ++ +TG ++V
Sbjct: 194 QAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV 253
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S VDMY K G I+ A +VF M + VSW +I +A G A + E
Sbjct: 254 VETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ T V+ C L+ GR +H LK + KCG + ++
Sbjct: 314 FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDMYSKCGALSSSR 372
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F ++L WN+M+ H + +EV LF +M + P+ TF LL A SH G
Sbjct: 373 EIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSG 432
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++GQ +F +M Y I+P +HY ++DLL RAG+++EALD+I + ++ +W A
Sbjct: 433 LVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVAL 492
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+GC H + + AA++I +L S G+ L+SN K++R+ ++
Sbjct: 493 LSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAME 552
Query: 500 KETGLSWIEEGNRVHTFAAGDRSHEK 525
K G S IE + TF D SH +
Sbjct: 553 KVPGYSAIEVNGELRTFLMEDLSHHE 578
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 9/371 (2%)
Query: 84 QIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
QIHA +I + +L + +S LI + ++ + F+E ++ + ++S+I ++
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
+ P + + QMI + I+PD F IKAC + G+++ V G+ DVFV
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
SS +++Y KCG++ A +F +M +R+V+ W+ M+ +A G+ A++ ++E E
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ +++ G+ ++GR +HG +T K G IE ASRV
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
F+ + W S++ AQ+ + F+ M+++G +P+ +T + +L ACS G +
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 383 DKGQQYFGLMKDYGIEPGAQHYAT---MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G+ L+ Y ++ T ++D+ + G L + +I + + W
Sbjct: 335 KTGR----LVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTM 389
Query: 440 LTGCRLHGDAE 450
++ +HG+ +
Sbjct: 390 ISCYGIHGNGQ 400
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 186 IHAFVVKTGFDVDVFVGSS-TVDMYGKCG---EIKNARKVFDEMPERNVVSWSGMICAYA 241
IHAFV+ TG ++ GSS + D+ CG EI ARKVFDE+P+R V ++ MI Y+
Sbjct: 36 IHAFVISTG---NLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
+ L+L+ + + E + + TF+ I+ C + +LE G + + Y
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
KCG ++ A +F + R++ W +M+ AQ + + + + M+N G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ + L LL A G G+ G + G+ ++VD+ + G ++ A
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+ M + S WG+ ++G +G A A A + LG
Sbjct: 273 RVFSRMMFKTAVS-WGSLISGFAQNGLANKAFEAVVEMQSLG 313
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 215/436 (49%), Gaps = 28/436 (6%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK---ACA 175
+ F+E E+S TW+++++ QN +D+ R + P +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNR------------VDDARKIFDVMPEKTEVSWTSM 240
Query: 176 ILGRCDIGKSIHAFVVKTGFDV----DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVV 231
++G G+ A + F+V V ++ + G+ GEI AR+VFD M ERN
Sbjct: 241 LMGYVQNGRIEDA---EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
SW +I + G + AL LF + + T S++ VC + L G+Q+H
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVF 351
++ +D KCG + + +F+ P +++ MWNS++ A H EE
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 352 KLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVD 409
K+F M G +PN +TF+ L ACS+ G++++G + + M+ +G++P HYA MVD
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
+LGRAG+ EA+++I +M +EP +VWG+ L CR H ++A F A ++ E+ +SG
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGT 537
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGD-RSH---EK 525
+LLSN K+++ R V+K G SW E N+VH F G SH E
Sbjct: 538 YILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQES 597
Query: 526 AKRNLSEIGGIGRXYG 541
+ L E+ G+ R G
Sbjct: 598 ILKILDELDGLLREAG 613
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 131/330 (39%), Gaps = 84/330 (25%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+ KS ++W+S+++ N +P A + F +M PD +I
Sbjct: 40 FDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS------------ 81
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
+ V Y K GEI ARKVFD MPERNVVSW+ ++ Y
Sbjct: 82 ---------------------WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY 120
Query: 241 ALLGEDENALKLFKE--------------ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
G+ + A LF + L+D ++D + + + +
Sbjct: 121 VHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDAC--KLYEMIPDKDNIARTSM 178
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
IHGLC K G ++ A +F+E R++ W +M+ Q+
Sbjct: 179 IHGLC--------------------KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
++ K+FD M +++ +L G I+ ++ F +M ++P A
Sbjct: 219 VDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKPVIACNA- 270
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
M+ LG+ G++ +A + +M E ++ W
Sbjct: 271 MISGLGQKGEIAKARRVFDSMK-ERNDASW 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+HA +++ V+ L+ Y K V S F+ K W+S+IS A
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 142 NELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ L A++ F +M + + +P++ F + + AC+ G + G I+ +++ F V
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPI 468
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICA 239
+ VDM G+ G A ++ D M E + W ++ A
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 238/483 (49%), Gaps = 39/483 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+++H + +K+ L+ VS+ L+ Y+ + + F+E ++ +W+ +ISS
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 141 QNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N AI F++M + N++ D+ S + AC+ L +IG+ I+ FVV T F++ V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSV 182
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+G++ VDM+ KCG + AR VFD M ++NV W+ M+ Y G + A LF+ + ++
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 260 DLSV-------------------------------NDFTFSSVIRVCGNSTLLELGRQIH 288
D+ + ++F S++ C + LE G+ IH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
G + KCG IE A VF E R+ W S++ A + +
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATM 407
L+ M+NVG+R + ITF+ +L AC+HGG + +G++ F M + + ++P ++H + +
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTES---VWGAFLTGCRLHGDAELAAFAADRIFELGH 464
+DLL RAG L EA ++I M E E+ V+ + L+ R +G+ ++A A+++ ++
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 465 VSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDR--S 522
S + LL++ + ++D G++K G S IE H F GD S
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLS 542
Query: 523 HEK 525
H K
Sbjct: 543 HPK 545
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 125 QEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGK 184
Q S ++ ++ SLA + + + F ++ + PD+ P +K+ L + G+
Sbjct: 7 QTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 185 SIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLG 244
+H + VK G + D +V +S + MY G+I+ KVFDEMP+R+VVSW+G+I +Y G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 245 EDENALKLFKEALLE-DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
E+A+ +FK E +L ++ T S + C LE+G +I+ + T ++
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIG 185
Query: 304 XXXXXXXXKCGVIEAASRVFN-------------------------------EAPIRNLG 332
KCG ++ A VF+ +P++++
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM 392
+W +M+ Q +E +LF M+ G+RP+ + LL C+ G +++G+ G +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 393 KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ + +VD+ + G ++ AL++ + T S W + + G ++G ++
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLIYGLAMNG---MS 361
Query: 453 AFAADRIFELGHVSSGMNVL 472
A D +E+ +V ++ +
Sbjct: 362 GRALDLYYEMENVGVRLDAI 381
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 209/442 (47%), Gaps = 36/442 (8%)
Query: 118 LQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAIL 177
+Q ++ ++ +W+S I+ L +N + A + F M + + P+ F + + C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 178 --GRCDIGKSIHAFVVKTGFDVD-VFVGSSTVDMYGK----------------------- 211
G +G +H + K G D + V VG++ + MY K
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 212 --------CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
G++ NA K+FD+MPER+++SW+ MI + G E AL F+E + +
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 264 NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVF 323
+ + + C N L G +H L + +CG +E A +VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 324 NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
R + WNS+++ A + + E F +M+ G +P+ +TF L ACSH GL++
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 384 KGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+G +YF +MK DY I P +HY +VDL RAG+L++AL ++++MP++P E V G+ L
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 443 CRLHG-DAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKE 501
C HG + LA + +L S V+LSN + ++ G+KK+
Sbjct: 385 CSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQ 444
Query: 502 TGLSWIEEGNRVHTFAAGDRSH 523
G S IE + +H F AGD +H
Sbjct: 445 PGFSSIEIDDCMHVFMAGDNAH 466
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 10/279 (3%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I+ Y ++ + + F++ E+ +W+++I+ + A+ +FR+M I ++PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+A+ AC LG G +H +V+ F +V V +S +D+Y +CG ++ AR+VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
M +R VVSW+ +I +A G +L F++ + + TF+ + C + L+E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 284 GRQIHGLCLKTSYDXXXXXXXX--XXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIA 340
G + + +K Y + G +E A ++ P++ N + S+L A
Sbjct: 326 GLRYFQI-MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Query: 341 CAQHAHT----EEVFKLFDRMKNVGMRPNFITFLCLLYA 375
C+ H + E + K + NV N++ L +YA
Sbjct: 385 CSNHGNNIVLAERLMKHLTDL-NVKSHSNYV-ILSNMYA 421
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H +++ ++ VS+ LI+ Y + F+ Q F ++++ +W+SVI A
Sbjct: 225 GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAA 284
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF-VVKTGFDVDVF 200
N ++ YFR+M +PD F A+ AC+ +G + G + F ++K + +
Sbjct: 285 NGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG--LRYFQIMKCDYRISPR 342
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMPER 228
+ VD+Y + G +++A K+ MP +
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 216/478 (45%), Gaps = 54/478 (11%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +H +K+ L S V + +FYSK+ P + +F E ++ +W+S+I+SLA
Sbjct: 248 EGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLA 307
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHA------------ 188
++ + + F +M + PD + I + GK+ H
Sbjct: 308 RSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCK 367
Query: 189 -----------------------------------------FVVKTGFDVDVFVGSSTVD 207
+VVKT D+ + V +S +D
Sbjct: 368 FELLSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLID 427
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
+YGK G++ A ++F E + NV++W+ MI +Y + E A+ LF + E+ + T
Sbjct: 428 LYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 486
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
+++ C N+ LE G+ IH +T ++ KCG +E + +F+
Sbjct: 487 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 546
Query: 328 IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
++ WN M+ H E LFD+M+ ++P TFL LL AC+H GL+++G++
Sbjct: 547 QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKK 606
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
F M Y ++P +HY+ +VDLL R+G L+EA + +MP P +WG L+ C HG
Sbjct: 607 LFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 666
Query: 448 DAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLS 505
+ E+ A+R + G ++L+N +M+R+ GV K G S
Sbjct: 667 EFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 724
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 138/309 (44%), Gaps = 4/309 (1%)
Query: 86 HAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELP 145
+A II L V+ LI+ Y+ P S + F + W+S+I + N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 146 SLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVK-TGFDVDVFVGSS 204
+ ++ +F M++ PD P + ACA L +G +H V+K GFD + VG+S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV- 263
V Y KCG +++A VFDEMP+R+VV+W+ +I + GE E L + V
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 264 --NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N T + C N L+ GR +HG +K K G A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
F E ++ W S++ + A+ EE F +F M+N GM P+ + CL+ L
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 382 IDKGQQYFG 390
+ +G+ + G
Sbjct: 347 VPQGKAFHG 355
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 176/437 (40%), Gaps = 59/437 (13%)
Query: 82 GQQIHAHIIK-SSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G +H ++K V + FYSK + F+E ++ W+++IS
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 141 QNELPSLAIEYFRQMII---DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
QN + Y +M D +P+ +AC+ LG G+ +H F VK G
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
FV SS Y K G A F E+ + ++ SW+ +I + A G+ E + +F E
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 258 LEDLSVNDFTFSSVIR-----------------VC------------------------- 275
+ + + S +I VC
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISE 383
Query: 276 -GN----STLLE------LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
GN +T+L+ LG+ +H +KTS D K G + A R+F
Sbjct: 384 EGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 443
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
EA N+ WN+M+ + +E+ LFDRM + +P+ IT + LL AC + G +++
Sbjct: 444 EADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 502
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCR 444
GQ + + E A ++D+ + G L+++ ++ A + W ++G
Sbjct: 503 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYG 561
Query: 445 LHGDAELAAFAADRIFE 461
+HGD E A D++ E
Sbjct: 562 MHGDVESAIALFDQMEE 578
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 5/268 (1%)
Query: 187 HAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGED 246
+A ++ G ++FV S + Y G+ + +VF + R++ W+ +I A+ G+
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK-TSYDXXXXXXXX 305
+L F LL S + FT V+ C +G +HGL LK +D
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 306 XXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM--- 362
KCG ++ A VF+E P R++ W +++ Q+ +E +M + G
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
+PN T C ACS+ G + +G+ G G+ ++M ++G EA
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 423 IIKAMPIEPTESVWGAFLTGCRLHGDAE 450
+ + E S W + + GD E
Sbjct: 287 SFRELGDEDMFS-WTSIIASLARSGDME 313
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 211/419 (50%), Gaps = 11/419 (2%)
Query: 116 FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID---NIRPDDHIFPSAIK 172
++ F+ + ++ + ++I +++ P L + YF M+ + +I P F I
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 173 ACAILGRCDIGKSIHAFVVKTG-FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVV 231
AC +GK IH +VVK G F D V + + +Y + + +ARKVFDE+P+ +VV
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
W ++ Y G L++FKE L+ + ++F+ ++ + C L G+ IH
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 292 LKTSY-DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
K + + KCG IE A VF + RN+ W +++ A + + ++
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 351 FKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMV 408
DR+ + G++P+ + L +L AC+HGG +++G+ M+ YGI P +HY+ +V
Sbjct: 305 TTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIV 364
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL--GHVS 466
DL+ RAG+L +ALD+I+ MP++P SVWGA L GCR H + EL A + +L G+V
Sbjct: 365 DLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVE 424
Query: 467 SGMNVL--LSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
L LSN M+ RG++K G S +E V F +GD SH
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSH 483
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 82 GQQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH ++K+ + S V ++ Y + +L + + F+E + W +++
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF-DVDV 199
+ L S +E F++M++ I PD+ +A+ ACA +G GK IH FV K + + DV
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FVG++ VDMY KCG I+ A +VF+++ RNV SW+ +I YA G + A E
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERE 314
Query: 260 D-LSVNDFTFSSVIRVCGNSTLLELGR-QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
D + + V+ C + LE GR + + + + G ++
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 318 AASRVFNEAPIRNLG-MWNSMLIACAQHAHTE 348
A + + P++ L +W ++L C H + E
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 173/355 (48%), Gaps = 20/355 (5%)
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL 242
GK IHA + GF ++ ++ + +Y +++ W+ MI Y
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYAL----------------SDLIPWNAMISGYVQ 170
Query: 243 LGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
G ++ L ++ + + + +TF+SV R C LE G++ H + +K
Sbjct: 171 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 230
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
KC RVF++ RN+ W S++ H EV K F++MK G
Sbjct: 231 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 290
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEAL 421
RPN +TFL +L AC+HGGL+DKG ++F MK DYGIEP QHYA MVD LGRAG+LQEA
Sbjct: 291 RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAY 350
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXX 481
+ + P + VWG+ L CR+HG+ +L AA + EL + G V+ +N
Sbjct: 351 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 410
Query: 482 XXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
+ + + GVKK+ G S IE VH F D SH EK + + E+
Sbjct: 411 LREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 465
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 20/271 (7%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG++IHA + V +N Y K +L + L A + W+++IS
Sbjct: 126 KGKRIHAQM---------FVVGFALNEYLKVKLLI--LYALSDL-----IPWNAMISGYV 169
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q L + + M + I PD + F S +AC+ L R + GK HA ++K ++
Sbjct: 170 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 229
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V S+ VDMY KC + +VFD++ RNV++W+ +I Y G+ LK F++ E
Sbjct: 230 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 289
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEA 318
N TF V+ C + L++ G + H +K Y + + G ++
Sbjct: 290 CRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 348
Query: 319 ASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
A ++P + + +W S+L AC H + +
Sbjct: 349 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 379
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 230/500 (46%), Gaps = 73/500 (14%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLP---VFSLQAFEEAQEKSATTWSSVISSL 139
+QIHA ++ + L S V LI + + +P ++ + F+E + + + V+
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAIL-----GRCDIGKSI-HAFVVKT 193
AQ+ P + + +M + PD + F +KAC+ L G GK + H FV+
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147
Query: 194 ----------------GFDVDVF---------VGSSTVDMYGKCGEIKNARKVFDEMP-- 226
G ++F SS Y K G+I A ++FDEMP
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 227 -----------------------------ERNVVSWSGMICAYALLGEDENALKLFKEAL 257
E++VV+W+ MI Y G + AL +FKE
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR 267
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-----SYDXXXXXXXXXXXXXXK 312
+ T S++ C LE G+++H L+T S K
Sbjct: 268 DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
CG I+ A VF R+L WN++++ A H H E ++F+ M+ + + PN +TF+ +
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGV 386
Query: 373 LYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
+ ACSH G +D+G++YF LM+D Y IEP +HY MVD+LGRAG+L+EA +++M IEP
Sbjct: 387 ILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEP 446
Query: 432 TESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXK 491
VW L C+++G+ EL +A +++ + SG VLLSN K
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRK 506
Query: 492 MLRDRGVKKETGLSWIEEGN 511
M D VKK TG+S IEE +
Sbjct: 507 MFDDTRVKKPTGVSLIEEDD 526
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 82 GQQIHAHIIKSSLQSIPL-----VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVI 136
G+++H +I++++ S + + + LI+ Y+K +++ F +++ +TW+++I
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Query: 137 SSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD 196
LA + +IE F +M + P++ F I AC+ GR D G+ + +++ ++
Sbjct: 354 VGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDMYN 411
Query: 197 VDVFVG--SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDE 247
++ + VDM G+ G+++ A + M E N + W ++ A + G E
Sbjct: 412 IEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVE 465
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 227/509 (44%), Gaps = 68/509 (13%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +HA I++ + S V+ L++ S + P +SL F ++E++ +++I L +N
Sbjct: 46 RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
++ +F M+ ++PD FP +K+ + LG +G+++HA +K D D FV
Sbjct: 105 ARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVR 164
Query: 203 SSTVDMYGKCGEIKNARKVFDE-----------------------------------MPE 227
S VDMY K G++K+A +VF+E MPE
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE 224
Query: 228 RNVVSWSGMICAYALLGEDENALKLFK-------------------------------EA 256
RN SWS +I Y GE A +LF+ E
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
L + L N++T ++V+ C S L G +IHG L KCG +
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ A+ VF+ +++ W +M+ A H + + F +M G +P+ + FL +L AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 377 SHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
+ +D G +F M+ DY IEP +HY +VDLLGRAGKL EA ++++ MPI P +
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W A C+ H A + + EL G + L L+
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQK 524
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSHE 524
R ++ G S+IE +++ F+AGD SH+
Sbjct: 525 RIKERSLGWSYIELDGQLNKFSAGDYSHK 553
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 225/452 (49%), Gaps = 37/452 (8%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I+ Y+++ +L+ F+E E++ +W+S++ +L Q A+ F +M R D
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRD 201
Query: 164 DHIFPSAIKACAILGRCDIGKS----------IHAFVVKTGF-----------------D 196
+ + + A G+ D + I + TG+ +
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
D ++ + + + E+ A +FD MPE+NV+SW+ MI Y E+E AL +F +
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK- 320
Query: 257 LLEDLSV--NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
+L D SV N T+ S++ C + L G+QIH L K+ + K G
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 315 VIEAASRVFNEAPI--RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
+ AA ++F+ + R+L WNSM+ A H H +E +++++M+ G +P+ +T+L L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 373 LYACSHGGLIDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
L+ACSH GL++KG ++F L++D + +HY +VDL GRAG+L++ + I
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARL 500
Query: 432 TESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXK 491
+ S +GA L+ C +H + +A ++ E G +G VL+SN
Sbjct: 501 SRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRM 560
Query: 492 MLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
++++G+KK+ G SW++ G + H F GD+SH
Sbjct: 561 KMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
K G+I ARK+FD +PER+VV+W+ +I Y LG+ A +LF D N T+++
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTA 114
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
++ S L + + + + + G I+ A +F+E P RN
Sbjct: 115 MVSGYLRSKQLSIAE----MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
+ WNSM+ A Q +E LF+RM R + +++ ++ + G +D+ ++ F
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 391 LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
M + I + M+ + ++ EA + + MP E + W +TG + +
Sbjct: 227 CMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITGFIRNREMN 281
Query: 451 LAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETG------- 503
A DR+ E +S +++ KMLRD VK G
Sbjct: 282 KACGLFDRMPEKNVIS--WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 504 ----LSWIEEGNRVH 514
L+ + EG ++H
Sbjct: 340 ACSDLAGLVEGQQIH 354
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+++ Y +++ + F+E E++ +W+++I AQ+ A+E F +M NI
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS- 173
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+ S +KA GR D ++ + + DV ++ VD K G++ AR++FD
Sbjct: 174 ---WNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
MPERN++SW+ MI YA + A +LF+ D + + + IR
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR---------- 276
Query: 284 GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
R+++ C +F+ P +N+ W +M+ +
Sbjct: 277 NREMNKAC-----------------------------GLFDRMPEKNVISWTTMITGYVE 307
Query: 344 HAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
+ EE +F +M ++ ++PN T++ +L ACS + +GQQ L+ +
Sbjct: 308 NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI 367
Query: 403 HYATMVDLLGRAGKL 417
+ ++++ ++G+L
Sbjct: 368 VTSALLNMYSKSGEL 382
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 223/461 (48%), Gaps = 33/461 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQA---FEEAQEKSATTWSSVISS 138
G+Q+H +K L V++ +I+ Y + + +A FE + K+ TW+S+I++
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPD--------------DHIFPSAIKACAILGRCDIGK 184
L AI F +M D + D + P+ + C +
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCL-------- 287
Query: 185 SIHAFVVKTGFDVDVFVGSSTVDMYGKCGE-IKNARKVFDEMPE-RNVVSWSGMICAYAL 242
+H+ VK+G V ++ + +Y + E + K+F EM R++V+W+G+I A+A+
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 243 LGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
+ E A+ LF + E LS + +TFSSV++ C IH +K +
Sbjct: 348 Y-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVL 406
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
KCG ++ RVF++ R++ WNSML A + H + + +F +M +
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---I 463
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
P+ TF+ LL ACSH G +++G + F + + P HYA ++D+L RA + EA
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVL-LSNXXXXX 480
++IK MP++P VW A L CR HG+ L AAD++ EL ++ M+ + +SN
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAE 583
Query: 481 XXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDR 521
K + V+KE LSW E GN+VH FA+G R
Sbjct: 584 GSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGR 624
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
+ +V + + ++MY KCG I AR+VFD MPERNVVSW+ +I Y G ++ LF
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF- 150
Query: 255 EALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
++L N+FT SSV+ C E G+Q+HGL LK +C
Sbjct: 151 SSMLSHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 315 VIEAASR---VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
AA VF +NL WNSM+ A ++ +F RM + G+ + T L
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 175/418 (41%), Gaps = 60/418 (14%)
Query: 82 GQQIHAHIIKSSL---QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS 138
G +H H++ Q++ ++++ LIN Y+K +++ Q F+ E++ +W+++I+
Sbjct: 78 GINLHHHMLSHPYCYSQNV-ILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITG 136
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC--DIGKSIHAFVVKTGFD 196
Q F M+ H FP+ ++L C + GK +H +K G
Sbjct: 137 YVQAGNEQEGFCLFSSML-------SHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLH 189
Query: 197 VDVFVGSSTVDMYGKCGE---IKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF 253
++V ++ + MYG+C + A VF+ + +N+V+W+ MI A+ + A+ +F
Sbjct: 190 CSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVF 249
Query: 254 KEALLEDLSVNDFTFSSVIRVCGNSTLL---ELGR---QIHGLCLKTSYDXXXXXXXXXX 307
+ + + T ++ S+ L E+ + Q+H L +K+
Sbjct: 250 MRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALI 309
Query: 308 XXXXKCGVIEAAS---RVFNE-APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
+ ++E + ++F E + R++ WN ++ A A + E LF +++ +
Sbjct: 310 KVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLS 366
Query: 364 PNFITFLCLLYACS-----------HGGLIDKGQQYFGLMKDYGIEPGAQ---------- 402
P++ TF +L AC+ H +I G ++ + I A+
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 403 ----------HYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
+ +M+ G++ L + + M I P + + A L+ C G E
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVE 484
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 201/447 (44%), Gaps = 39/447 (8%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKAC-A 175
+L F E ++ A W+ +IS A + F++M+ +PD + F S + AC A
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 176 ILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGK------------------------ 211
G+ +HA ++K G+ V +S + Y K
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 212 -------CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
GE + A +VF PE+N+V+W+ MI Y G+ E AL+ F E + + +
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
F + +V+ C LL G+ IHG + + KCG I+ A R F
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
+ ++L WN+ML A H ++ KL+D M G++P+ +TF+ LL CSH GL+++
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 385 GQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE----SVWGAF 439
G F ++KDY I H M+D+ GR G L EA D+ T+ S W
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMN-VLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L C H EL ++ ++ S M+ VLLSN + + +RG+
Sbjct: 517 LGACSTHWHTELGR-EVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 499 KKETGLSWIEEGNRVHTFAAGDRSHEK 525
KK G SWIE GN+V TF GD SH +
Sbjct: 576 KKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 170/410 (41%), Gaps = 66/410 (16%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q F+ E W+++++S ++ L AI F Q+ + +PDD+ F + + CA LG
Sbjct: 25 QVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLG 84
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD--------------- 223
G+ I + V+++GF + V +S +DMYGKC + +A KVF
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 224 ------------------EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVND 265
EMP+R +W+ MI +A G+ E+ L LFKE L + +
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 266 FTFSSVIRVC-GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR--- 321
+TFSS++ C +S+ + GR +H + LK + K G + A R
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 322 ----------------------------VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKL 353
VF+ AP +N+ W +M+ ++ E+ +
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
F M G+ + + +L+ACS L+ G+ G + G + A +V+L +
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 414 AGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
G ++EA + + S W L +HG A+ A D + G
Sbjct: 385 CGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLADQALKLYDNMIASG 433
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 35/284 (12%)
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+S + K G I +AR+VFD MPE + V+W+ M+ +Y+ LG + A+ LF + D
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG-------- 314
+D++F++++ C + ++ GR+I L +++ + KC
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 315 -------------------------VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
EAA VF E P R WN M+ A E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACS-HGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
LF M +P+ TF L+ ACS + G+ +M G + +++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ G +A+ ++++ + T+ W + + C G+ E A
Sbjct: 248 SFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH +I Q V + L+N Y+K + +AF + K +W++++ +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L A++ + MI I+PD+ F + C+ G + G I +VK + + + V
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD-YRIPLEV 474
Query: 202 GSST--VDMYGKCGEIKNARKV 221
T +DM+G+ G + A+ +
Sbjct: 475 DHVTCMIDMFGRGGHLAEAKDL 496
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 225/478 (47%), Gaps = 50/478 (10%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G QIH + + L+ + + L++ YSK + F + K + +W+S+I+ L
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q + S A E F +M P GK + ++ D+
Sbjct: 353 QRKQISEAYELFEKM------------P--------------GKDMVSWT-------DMI 379
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
G S GK GEI ++F MPE++ ++W+ MI A+ G E AL F + L ++
Sbjct: 380 KGFS-----GK-GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ N +TFSSV+ + L G QIHG +K + KCG A
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
++F+ N+ +N+M+ + + ++ KLF +++ G PN +TFL LL AC H G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+D G +YF MK Y IEPG HYA MVDLLGR+G L +A ++I MP +P VWG+
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L+ + H +LA AA ++ EL S+ V+LS + + + +K
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIK 673
Query: 500 KETGLSWIEEGNRVHTFAAGDRSHEKAKRNLSEIGGIGRXYGESWFMWQIQVLCFKKW 557
K+ G SWI VH F AGD S + NL EI G +F + ++C +W
Sbjct: 674 KDPGSSWIILKGEVHNFLAGDES----QLNLEEIAICG------FFALMVIIVCILEW 721
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 137/359 (38%), Gaps = 66/359 (18%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGR- 179
F + +S +W ++IS+ A+N S A + F +M + + + + IK LG+
Sbjct: 73 FRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKA 132
Query: 180 ----CDIGKS--------IHAFVVKTGFD------------------------------- 196
CDI + I FV FD
Sbjct: 133 YELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGK 192
Query: 197 ----VDVFVG---------SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALL 243
V VF G SS V Y K G I +AR +FD M ERNV++W+ MI Y
Sbjct: 193 WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKA 252
Query: 244 GEDENALKLFKEALLE-DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
G E+ LF E D+ VN T + + + C + G QIHGL + +
Sbjct: 253 GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFL 312
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
K G + A VF ++ WNS++ Q E ++LF++M M
Sbjct: 313 GNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM 372
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+++ ++ S G I K + FG+M E + M+ G +EAL
Sbjct: 373 ----VSWTDMIKGFSGKGEISKCVELFGMMP----EKDNITWTAMISAFVSNGYYEEAL 423
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 210/431 (48%), Gaps = 4/431 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ H ++KS ++ + L++ Y K + + F E W+++I
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N + A+ F++M I+P+ S + C ++ ++G+S+H +K G D
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTN 378
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ V MY KC + ++A+ VF+ E+++V+W+ +I ++ G AL LF E
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES 438
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEA 318
++ N T +S+ C + L +G +H +K + KCG ++
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +F+ +N W++M+ + T +LF+ M +PN TF +L AC H
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGH 558
Query: 379 GGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
G++++G++YF M KDY P +HY MVD+L RAG+L++ALDII+ MPI+P +G
Sbjct: 559 TGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFG 618
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRG 497
AFL GC +H +L ++ +L + VL+SN +++ RG
Sbjct: 619 AFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRG 678
Query: 498 VKKETGLSWIE 508
+ K G S +E
Sbjct: 679 LSKIAGHSTME 689
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 171/381 (44%), Gaps = 11/381 (2%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q H + + L ++ L++ Y + F++ E W ++ N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT-GFDVDVFV 201
+ ++ + ++ R DD +F A+KAC L D GK IH +VK FD V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT 180
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G +DMY KCGEIK+A KVF+++ RNVV W+ MI Y E L LF ++
Sbjct: 181 G--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N++T+ ++I C + L G+ HG +K+ + KCG I A R
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VFNE +L MW +M++ + E LF +MK V ++PN +T +L C GL
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GL 355
Query: 382 IDK---GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
I+ G+ GL GI A +V + + + ++A + + M E W +
Sbjct: 356 IENLELGRSVHGLSIKVGIWDTNVANA-LVHMYAKCYQNRDAKYVFE-MESEKDIVAWNS 413
Query: 439 FLTGCRLHGDAELAAFAADRI 459
++G +G A F R+
Sbjct: 414 IISGFSQNGSIHEALFLFHRM 434
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 211/448 (47%), Gaps = 17/448 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G Q+H+ I + + VS +++ Y+K + AF+E +S +W+++IS
Sbjct: 96 QGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI 155
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD---- 196
+ LA + F QM H+ I + G G A + FD
Sbjct: 156 RCGELDLASKLFDQM--------PHVKDVVIYNAMMDGFVKSGDMTSA---RRLFDEMTH 204
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA 256
V ++ + Y +I ARK+FD MPERN+VSW+ MI Y + + ++LF+E
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 257 -LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
L +D T SV+ ++ L LG H + D KCG
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
IE A R+F+E P + + WN+M+ A + + LF M + +P+ IT L ++ A
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITA 383
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
C+HGGL+++G+++F +M++ G+ +HY MVDLLGRAG L+EA D+I MP EP +
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
+FL+ C + D E A + EL + G VLL N ++R
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 496 RGVKKETGLSWIEEGNRVHTFAAGDRSH 523
KKE G S IE V F +GD +H
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTH 531
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 215 IKNARKVFDEMPERNVVSWSG-MICAYALLGEDENALKLFKEALLED-LSVNDFTFSSVI 272
I ARK+FD+ P+R+ S MI AY + ++ L+++ E + ++FTF+++
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
+ C S + G Q+H + + K G + A F+E P R+
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNV 360
W +++ + + KLFD+M +V
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHV 173
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 219/490 (44%), Gaps = 64/490 (13%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKT---QLPVFSLQAFEEAQEKSATT------- 131
G+QIHA I+ ++ ++ L+N Y+K ++ + L+ E + S +
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 132 ---------------------WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
W+S+IS N + A+ F +M + R D +
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAV 324
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG----------------- 213
I AC LG + GK +H K G D+ V S+ +DMY KCG
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384
Query: 214 --------------EIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
I +A++VF+ + ++++SW+ M ++ G L+ F +
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
DL ++ + SSVI C + + LELG Q+ D KCG +E
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RVF+ + WNSM+ A + E LF +M G+RP ITF+ +L AC++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 380 GLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
GL+++G++ F MK D+G P +H++ MVDLL RAG ++EA+++++ MP + S+W +
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGV 498
L GC +G + AA++I EL +S V LS K++R+ V
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 684
Query: 499 KKETGLSWIE 508
K G SW +
Sbjct: 685 TKNPGSSWTD 694
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 150/391 (38%), Gaps = 71/391 (18%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F EK T +S++ N A+ F+++ N D + +KACA L
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEAL 203
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA---------------------- 218
GK IHA ++ G + D + SS V++Y KCG+++ A
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 219 ---------RKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFS 269
R +FD R V+ W+ MI Y AL LF E + + + T +
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE-MRNETREDSRTLA 322
Query: 270 SVIRVCGNSTLLELGRQIHGLCLK---------------------------------TSY 296
+VI C LE G+Q+H K SY
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
D CG I+ A RVF ++L WNSM +Q+ T E + F +
Sbjct: 383 D--TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
M + + + ++ ++ AC+ ++ G+Q F G++ ++++DL + G
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 417 LQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
++ + M ++ E W + ++G +G
Sbjct: 501 VEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 148/367 (40%), Gaps = 86/367 (23%)
Query: 91 KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIE 150
K L SI +V++HL+ YS++ + F+E +++ +W+++I + ++
Sbjct: 55 KGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLR 114
Query: 151 YFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYG 210
+F M P+ + G+ +V V +
Sbjct: 115 FFDMM------PE----------------------------RDGYSWNVVVSG-----FA 135
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
K GE+ AR++F+ MPE++VV+ + ++ Y L G E AL+LFKE + S + T ++
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTT 192
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR--------- 321
V++ C L+ G+QIH L + KCG + AS
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 322 ----------------------VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
+F+ R + +WNSM+ + E LF+ M+N
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN 312
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQY------FGLMKDYGIEPGAQHYATMVDLLGR 413
R + T ++ AC G ++ G+Q FGL+ D + +T++D+ +
Sbjct: 313 -ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA------STLLDMYSK 365
Query: 414 AGKLQEA 420
G EA
Sbjct: 366 CGSPMEA 372
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 147 LAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF-DVDVFVGSST 205
L+ + + M +D R + +++C+ R + + + ++K GF V V +
Sbjct: 13 LSSSFLQAMEVDCRR----YYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHL 68
Query: 206 VDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVND 265
+ MY + G++ AR +FDEMP+RN SW+ MI Y GE +L+ F D+
Sbjct: 69 LQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPER 122
Query: 266 FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE 325
+S + V G K G + A R+FN
Sbjct: 123 DGYSWNVVVSG---------------------------------FAKAGELSVARRLFNA 149
Query: 326 APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKG 385
P +++ NS+L + + EE +LF K + + IT +L AC+ + G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLF---KELNFSADAITLTTVLKACAELEALKCG 206
Query: 386 QQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+Q + G+E ++ +++V++ + G L+ A +++ + EP + A ++G
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISG 262
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 208/444 (46%), Gaps = 2/444 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H I+K+ + LI Y K S + E K W+ +IS L +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
A+ F +M+ S + +CA LG D+G S+H +V++ G+ +D
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY KCG + + +F+ M ER++VSW+ +I YA + AL LF+E + +
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 262 -SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
V+ FT S+++ C ++ L +G+ IH + +++ KCG +EAA
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R F+ +++ W ++ H + +++ + GM PN + FL +L +CSH G
Sbjct: 504 RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
++ +G + F M +D+G+EP +H A +VDLL RA ++++A K P+ V G
Sbjct: 564 MVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L CR +G E+ + + EL +G V L + +R G+K
Sbjct: 624 LDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLK 683
Query: 500 KETGLSWIEEGNRVHTFAAGDRSH 523
K G S IE + TF SH
Sbjct: 684 KLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 161/361 (44%), Gaps = 4/361 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G IH ++ + S +S L+N Y+K L + + FEE +E+ W+++I ++
Sbjct: 65 GLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A +M I+P + + + + +H F V GFD D+ V
Sbjct: 125 AGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAV 181
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S +++Y KC + +A+ +FD+M +R++VSW+ MI YA +G LKL + L
Sbjct: 182 MNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGL 241
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ TF + + V G LE+GR +H +KT +D KCG EA+ R
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
V P +++ W M+ + E+ +F M G + ++ +C+ G
Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGS 361
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
D G G + +G +++ + + G L ++L I + M E W A ++
Sbjct: 362 FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIIS 420
Query: 442 G 442
G
Sbjct: 421 G 421
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 152/339 (44%), Gaps = 8/339 (2%)
Query: 127 KSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSI 186
S ++S I+ L+ + + F M+ + + PD FPS +KACA L R G SI
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 187 HAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGED 246
H V+ GF D ++ SS V++Y K G + +ARKVF+EM ER+VV W+ MI Y+ G
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ--IHGLCLKTSYDXXXXXXX 304
A L E + + T ++ S +LE+ + +H + +D
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMN 183
Query: 305 XXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP 364
KC + A +F++ R++ WN+M+ A + E+ KL RM+ G+RP
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 365 NFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDII 424
+ TF L ++ G+ + G + ++ + + GK + + ++
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 425 KAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+ +P + W ++G G AE A + + G
Sbjct: 304 ETIPNKDV-VCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 214/441 (48%), Gaps = 19/441 (4%)
Query: 42 PVFEQNYKPPQNLNQFSF----EEKYRHICEXXXXXXXXXXXXKGQQIHAHIIKSSLQSI 97
VF Q L++FSF + R +C G+ +H ++S
Sbjct: 111 SVFNQLRAKGLTLDRFSFITTLKSCSRELC-----------VSIGEGLHGIALRSGFMVF 159
Query: 98 PLVSHHLINFYSKTQLPVFSLQAFEEA-QEKSATTWSSVISSLAQNELPSLAIEYFRQMI 156
+ + LI+FY + + F+E Q A T+S++++ Q +LA++ FR M
Sbjct: 160 TDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 157 IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIK 216
+ + S + A + LG +S H +K G D+D+ + ++ + MYGK G I
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 217 NARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCG 276
+AR++FD ++VV+W+ MI YA G E + L ++ E + N TF ++ C
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 277 NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNS 336
S +GR + L + K G++E A +FN +++ W +
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTA 399
Query: 337 MLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD 394
M+ H E LF++M +N +RPN ITFL +L ACSHGGL+ +G + F M +
Sbjct: 400 MISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
Query: 395 -YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAA 453
Y P +HY +VDLLGRAG+L+EA ++I+ +PI + W A L CR++G+A+L
Sbjct: 460 AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGE 519
Query: 454 FAADRIFELGHVSSGMNVLLS 474
R+ E+G +LL+
Sbjct: 520 SVMMRLAEMGETHPADAILLA 540
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 3/371 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+IH +++K+ L L+ F S + ++ FE + ++++I + +
Sbjct: 45 SRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIR-YASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
+ P A F Q+ + D F + +K+C+ IG+ +H +++GF V +
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR 163
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ + Y CG+I +ARKVFDEMP+ + V++S ++ Y + + AL LF+ ++
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
VN T S + + L H LC+K D K G I +A R
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F+ A +++ WN M+ A+ EE L +MK M+PN TF+ LL +C++
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
G+ L+++ I A +VD+ + G L++A++I M + +S W A ++
Sbjct: 344 AFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS-WTAMIS 402
Query: 442 GCRLHGDAELA 452
G HG A A
Sbjct: 403 GYGAHGLAREA 413
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 216/436 (49%), Gaps = 17/436 (3%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QIHA II L L++ S L ++L + S ++++ISS+ N
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLS-YALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 143 ELPS---LAIEYFRQMIIDN---IRPDDHIFPSAIKACAILGRCDI-GKSIHAFVVK--T 193
+ LA + Q++ +RP++ +PS KA + G+++HA V+K
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLE 144
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYA---LLGEDENAL 250
+ D FV ++ V Y CG+++ AR +F+ + E ++ +W+ ++ AYA + DE L
Sbjct: 145 PVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVL 204
Query: 251 KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
LF + N+ + ++I+ C N G H LK +
Sbjct: 205 LLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLY 261
Query: 311 XKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
KCG + A +VF+E R++ +N+M+ A H +E +L+ + + G+ P+ TF+
Sbjct: 262 SKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFV 321
Query: 371 CLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI 429
+ ACSH GL+D+G Q F MK YGIEP +HY +VDLLGR+G+L+EA + IK MP+
Sbjct: 322 VTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPV 381
Query: 430 EPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXX 489
+P ++W +FL + HGD E A + L +SG VLLSN
Sbjct: 382 KPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKT 441
Query: 490 XKMLRDRGVKKETGLS 505
++++D V K G+S
Sbjct: 442 RELMKDHRVNKSPGIS 457
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 23/356 (6%)
Query: 1 MLRQVSDRSTETPITLSKILTNLLVERIKPELKPQQTPLNQPVFEQNYKPPQNL---NQF 57
+LRQ+ + S L N L+ I QT L +++Q N N+F
Sbjct: 62 ILRQIPNPSV--------FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEF 113
Query: 58 SFEEKYRHICEXXXXXXXXXXXXKGQQIHAHIIK--SSLQSIPLVSHHLINFYSKTQLPV 115
++ ++ G+ +HAH++K + V L+ FY+
Sbjct: 114 TYPSLFK------ASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 116 FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACA 175
+ FE +E TW++++++ A +E E + +RP++ + IK+CA
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 176 ILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSG 235
LG G H +V+K ++ FVG+S +D+Y KCG + ARKVFDEM +R+V ++
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 236 MICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS 295
MI A+ G + ++L+K + + L + TF I C +S L++ G QI +K
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN-SMKAV 346
Query: 296 Y--DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
Y + + G +E A + P++ N +W S L + H E
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 195/400 (48%), Gaps = 2/400 (0%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
+++ +W+S+ + + A + M+ + +PD F + +C G+
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE 245
IH+ + G D D+ ++ + MY K + +AR +FD M R VSW+ MI YA G+
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC-LKTSYDXXXXXXX 304
+ AL LF + + T S+I CG LE G+ I +
Sbjct: 338 MDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN 397
Query: 305 XXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP 364
KCG I A +F+ P + + W +M+ A + E KLF +M ++ +P
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 365 NFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDI 423
N ITFL +L AC+H G ++KG +YF +MK Y I PG HY+ MVDLLGR GKL+EAL++
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 424 IKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXX 483
I+ M +P +WGA L C++H + ++A AA+ +F L + V ++N
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 484 XXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
+++ R +KK G S I+ + H+F G+ H
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 4/368 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +HAH+IKS S V ++ + K ++ + FE E+ ATTW++++S Q+
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A FR+M ++ I PD + I++ + + +++HA ++ G DV V V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 203 SSTVDMYGKCGEIKNARKVFDEMP--ERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
++ + YGKCG++ +A+ VF+ + +R VVSW+ M AY++ GE +A L+ L E+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ TF ++ C N L GR IH + D K +A
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+F+ R W M+ A+ +E LF M G +P+ +T L L+ C G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 381 LIDKGQQYFGLMKDYGIE-PGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
++ G+ YG + ++D+ + G + EA DI P E T W
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTM 430
Query: 440 LTGCRLHG 447
+ G L+G
Sbjct: 431 IAGYALNG 438
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 5/333 (1%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S W+ I P ++ FR+M P++ FP KACA L + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDE 247
A ++K+ F DVFVG++TVDM+ KC + A KVF+ MPER+ +W+ M+ + G +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
A LF+E L +++ + T ++I+ L+L +H + ++ D
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 308 XXXXKCGVIEAASRVFN--EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
KCG +++A VF + R + WNSM A + + F L+ M +P+
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
TF+ L +C + + +G+ G + + T + + ++ A +
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAE--LAAFAA 456
M S W ++G GD + LA F A
Sbjct: 316 IMTSRTCVS-WTVMISGYAEKGDMDEALALFHA 347
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 192/409 (46%), Gaps = 41/409 (10%)
Query: 136 ISSLAQNELPSLAIEYFRQMIIDNIRP-DDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
+SS A A+ F QM P D H+F A+K+CA R +G S+HA VK+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
F + FVG + +DMYGKC + +ARK+FDE+P+RN V W+ MI Y G+ + A++L+
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELY- 137
Query: 255 EALLEDLSVNDFTFSSVIR------------------------------------VCGNS 278
EA+ D+ N+ +F+++I+ C
Sbjct: 138 EAM--DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
L ++IH + + +CG I VF+ R++ W+S++
Sbjct: 196 GAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGI 397
A A H E K F M+ + P+ I FL +L ACSH GL D+ YF M+ DYG+
Sbjct: 256 SAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGL 315
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
HY+ +VD+L R G+ +EA +I+AMP +PT WGA L CR +G+ ELA AA
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAAR 375
Query: 458 RIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSW 506
+ + + VLL +++ GVK G SW
Sbjct: 376 ELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 43/306 (14%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL-- 139
G +HAH +KS+ S P V L++ Y K + + F+E +++A W+++IS
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 140 ------------AQNELPS-------------------LAIEYFRQMIIDNIRPDDHIFP 168
A + +P+ AIE++R+MI +P+
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 169 SAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
+ + AC+ +G + K IH++ + + + S V+ YG+CG I + VFD M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNS-----TLLEL 283
+VV+WS +I AYAL G+ E+ALK F+E L ++ +D F +V++ C ++ L+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 284 GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG-MWNSMLIACA 342
R L+ S D + G E A +V P + W ++L AC
Sbjct: 307 KRMQGDYGLRASKD----HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR 362
Query: 343 QHAHTE 348
+ E
Sbjct: 363 NYGEIE 368
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
++IH++ ++ ++ P + L+ Y + V+ F+ +++ WSS+IS+ A +
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A++ F++M + + PDD F + +KAC+ G D A V D +
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD-----EALVYFKRMQGDYGLR 316
Query: 203 SST------VDMYGKCGEIKNARKVFDEMPERNVV-SWSGMICAYALLGEDENALKLFKE 255
+S VD+ + G + A KV MPE+ +W ++ A GE E A +E
Sbjct: 317 ASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARE 376
Query: 256 ALL 258
L+
Sbjct: 377 LLM 379
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 197/398 (49%), Gaps = 3/398 (0%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F + S + W++++S + E AI FRQM N++PD + +CA L
Sbjct: 339 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 398
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDE-MPERNVVSWSGMICA 239
+ GK IH V++T + + S + +Y +C +++ + +FD+ + E ++ W+ MI
Sbjct: 399 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 458
Query: 240 YALLGEDENALKLFKEA-LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
+ D AL LF+ L N+ +F++V+ C L GRQ HGL +K+ Y
Sbjct: 459 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 518
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK 358
KCG I++A + F+ +N +WN M+ + +E L+ +M
Sbjct: 519 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 578
Query: 359 NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKL 417
+ G +P+ ITF+ +L ACSH GL++ G + M+ +GIEP HY +VD LGRAG+L
Sbjct: 579 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 638
Query: 418 QEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXX 477
++A + +A P + + +W L+ CR+HGD LA A+++ L SS VLLSN
Sbjct: 639 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 698
Query: 478 XXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHT 515
++ V K G SW GN + +
Sbjct: 699 SSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDS 736
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 157/338 (46%), Gaps = 17/338 (5%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+ F+ E+ +W+++IS L + A+ +++M+ D P S + AC+ +
Sbjct: 59 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 118
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN-ARKVFDEMPERNVVSWSGMI 237
G H VKTG D ++FVG++ + MY KCG I + +VF+ + + N VS++ +I
Sbjct: 119 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 178
Query: 238 CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRV------CGNSTLL---ELGRQIH 288
A + A+++F+ + + V+ S+++ + C + + + ELG+QIH
Sbjct: 179 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 238
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
L L+ + K + A +F E P N+ WN M++ Q ++
Sbjct: 239 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 298
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
+ + RM++ G +PN +T + +L AC G ++ G++ F + +P + M+
Sbjct: 299 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP----QPSVSAWNAML 354
Query: 409 DLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTGC 443
+EA+ + M ++P ++ L+ C
Sbjct: 355 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 392
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 16/274 (5%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEA-QEKSATTWSSVISSLA 140
G+QIH +I++ + + LI YS+ + S F++ E W+S+IS
Sbjct: 401 GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 460
Query: 141 QNELPSLAIEYFRQMIIDNIR-PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
N L + A+ FR+M + P++ F + + +C+ L G+ H VVK+G+ D
Sbjct: 461 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDS 520
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FV ++ DMY KCGEI +AR+ FD + +N V W+ MI Y G + A+ L+++ +
Sbjct: 521 FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISS 580
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELG-------RQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
+ TF SV+ C +S L+E G ++IHG+ + +
Sbjct: 581 GEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI------EPELDHYICIVDCLGR 634
Query: 313 CGVIEAASRVFNEAPIRNLG-MWNSMLIACAQHA 345
G +E A ++ P ++ +W +L +C H
Sbjct: 635 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 668
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 157/373 (42%), Gaps = 45/373 (12%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-FSLQAFEEAQEKSATTWSSVISSLA 140
G + H +K+ L V + L++ Y+K V + ++ FE + + ++++VI LA
Sbjct: 123 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 182
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD---------IGKSIHAFVV 191
+ A++ FR M ++ D + + A CD +GK IH +
Sbjct: 183 RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL 242
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK 251
+ GF D+ + +S +++Y K ++ A +F EMPE NVVSW+ MI + + +++
Sbjct: 243 RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE 302
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
N+ T SV+ C S +E GR
Sbjct: 303 FLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR-------------------------- 336
Query: 312 KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
R+F+ P ++ WN+ML + + H EE F +M+ ++P+ T
Sbjct: 337 ---------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 387
Query: 372 LLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEP 431
+L +C+ ++ G+Q G++ I + + ++ + K++ + I E
Sbjct: 388 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 447
Query: 432 TESVWGAFLTGCR 444
+ W + ++G R
Sbjct: 448 DIACWNSMISGFR 460
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DV+ ++ + K G++ A +VFD MPER+VVSW+ MI G +E AL ++K +
Sbjct: 37 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 96
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG-VI 316
+ + FT +SV+ C G + HG+ +KT D KCG ++
Sbjct: 97 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 156
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
+ RVF N + +++ A+ E ++F M G++ + +
Sbjct: 157 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 207
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 200/422 (47%), Gaps = 2/422 (0%)
Query: 89 IIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLA 148
++ +Q L+S L++ Y K + F++ + K+ +W+++IS N+ +
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 149 IEYFRQMIIDNIRPDDHIFPSAIKACAILGR-CDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
++ FR M +N+RP+ S + AC L + K IH F + G D + ++ +
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMT 295
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFT 267
MY +CG + +R +F+ R+VV WS MI YA G+ + L + E + N T
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
+++ C NSTLL +H LK + KCG + AA VF E
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 328 IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
++L W+SM+ A H H E ++F M G + + FL +L AC+H GL+++ Q
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
F Y + +HYA ++LLGR GK+ +A ++ MP++P+ +W + L+ C HG
Sbjct: 476 IFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Query: 448 DAELAA-FAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSW 506
++A A+ + + + VLLS ++++ R + K G S
Sbjct: 536 RLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSK 595
Query: 507 IE 508
IE
Sbjct: 596 IE 597
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 160/373 (42%), Gaps = 12/373 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H +K+ +VS+ LI+ Y+K + F+E + ++ S+I+S Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD-IGKSIHAFV-VKTGFDVDV 199
+ L A++ ++M P + S + C +G + + HA V V V
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ ++ VDMY K + A VFD+M +N VSW+ MI E + LF+ E
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 260 DLSVNDFTFSSVIRVC-----GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
+L N T SV+ C G+S L ++IHG + +CG
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSS----LVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
+ + +F + +R++ MW+SM+ A+ EV L ++M+ G+ N +T L ++
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
AC++ L+ + G ++D+ + G L A ++ + E
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLV 420
Query: 435 VWGAFLTGCRLHG 447
W + + LHG
Sbjct: 421 SWSSMINAYGLHG 433
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
++IH + + ++ + Y + S FE ++ + WSS+IS A+
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
S + QM + I + + + AC ++H+ ++K GF + +G
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG 391
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
++ +DMY KCG + AR+VF E+ E+++VSWS MI AY L G AL++FK +
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
V+D F +++ C ++ L+E + I K + G I+ A V
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 323 FNEAPIR-NLGMWNSMLIACAQHAHTEEVFKL 353
P++ + +W+S+L AC H + K+
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 19/294 (6%)
Query: 166 IFPSAIKACAILGR-CDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDE 224
I PS IKACA +G +H +K G D D V +S + MY K RKVFDE
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 225 MPERNVVSWSGMI---CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC---GNS 278
M R+ VS+ +I C LL E A+KL KE +S++ +C G+S
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYE---AMKLIKEMYFYGFIPKSELVASLLALCTRMGSS 164
Query: 279 TLLELGRQIHGLCL-KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSM 337
+ ++ R H L L K AA VF++ ++N W +M
Sbjct: 165 S--KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 338 LIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC---SHGGLIDKGQQYFGLMKD 394
+ C + + E LF M+ +RPN +T L +L AC ++G + K + G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK--EIHGFSFR 280
Query: 395 YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGD 448
+G + A + + R G + + + + + +W + ++G GD
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV-VMWSSMISGYAETGD 333
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 217/449 (48%), Gaps = 16/449 (3%)
Query: 82 GQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+ +H I+ + V + LI+ YSK + + F+E ++ +W+S+++
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N+ A+E F M+ + + D+ S ++ C + KSIH +++ G++ +
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
SS +D Y C + +A V D M ++VVS S MI A G + A+ +F + D
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH--MRD 422
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX-XXXXXXXXKCGVIEAA 319
+ N T S++ C S L + HG+ ++ S KCG IE A
Sbjct: 423 -TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
R F++ +N+ W ++ A A + ++ LFD MK G PN +T+L L AC+HG
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP--IEPTESVWG 437
GL+ KG F M + +P QHY+ +VD+L RAG++ A+++IK +P ++ S WG
Sbjct: 542 GLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 438 AFLTGCR-----LHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKM 492
A L+GCR L +E+ A + EL + S +L S+ ++
Sbjct: 602 AILSGCRNRFKKLIITSEVVA----EVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRL 657
Query: 493 LRDRGVKKETGLSWIEEGNRVHTFAAGDR 521
+++R V+ G S + EGN F AGD+
Sbjct: 658 VKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 167/387 (43%), Gaps = 36/387 (9%)
Query: 102 HHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIR 161
+ + +FY K L+ F+ + + +W+ ++ L + +F ++ +
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 162 PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKV 221
P+ I AC L G+ IH +V+++GF V +S + MY + +ARK+
Sbjct: 125 PNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKL 181
Query: 222 FDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVND-FTFSSVIRVCGNSTL 280
FDEM ER+V+SWS +I +Y E LKLFKE + E + D T +SV++ C
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 281 LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV-IEAASRVFNEAPIRNLGMWNSMLI 339
+++GR +HG ++ +D G +++A RVF+E RN+ WNS+L
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 340 ACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS-----------HGGLIDKGQQ- 387
+ +E ++F M + + +T + LL C HG +I +G +
Sbjct: 302 GFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYES 361
Query: 388 -------------YFGLMKDYGIEPGAQHY------ATMVDLLGRAGKLQEALDIIKAMP 428
L+ D G + Y +TM+ L AG+ EA+ I M
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Query: 429 IEPTESVWGAFLTGCRLHGDAELAAFA 455
P + L C + D + +A
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSKWA 448
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 25/282 (8%)
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
D +FP KACA L +F G+S D Y KCG++ + + F
Sbjct: 44 DPFVFPIVFKACAKLSW-------------------LFQGNSIADFYMKCGDLCSGLREF 84
Query: 223 DEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE 282
D M R+ VSW+ ++ G +E L F + + N T VI C +L
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC--RSLWF 142
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
G +IHG +++ + + +A ++F+E R++ W+ ++ +
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYV 201
Query: 343 QHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
Q KLF M P+ +T +L AC+ ID G+ G G +
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 402 QHYA-TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+++D+ + + A + S W + L G
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS-WNSILAG 302
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 226/483 (46%), Gaps = 75/483 (15%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI--IDNIRPDDHIFPSAIKACAILG 178
F E E++ +W+++IS A NEL A+ F +M +D + P+ S AC LG
Sbjct: 254 FCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Query: 179 R--CDIGKSIHAFVVKTGF---DVDVFVGSSTVDMYGKCGEIKNARKVFDE--------- 224
+G+ +HA V+ G+ D D + S V MY G I +A+ + +E
Sbjct: 314 VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNI 373
Query: 225 ----------------MPER-----NVVSWSGMICAYALLGEDENALKLFKE-------- 255
+ ER + VSW+ MI Y G+ A LF++
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT 433
Query: 256 ------------------ALLED-----LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
+LL D L + T+S ++ G ++ L+ G+ IH +
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 293 KTS--YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
KT+ YD KCG IE A +F + ++ WNSM++ + H ++
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVD 409
LF M + G +PN +TFL +L ACSH GLI +G + F MK+ Y I+PG HY +M+D
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMID 613
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLH---GDAE-LAAFAADRIFELGHV 465
LLGRAGKL+EA + I A+P P +V+GA L C L+ DAE +A AA R+ EL V
Sbjct: 614 LLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPV 673
Query: 466 SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEK 525
++ +V L N K + +GVKK G SW+ R + F +GD+S +
Sbjct: 674 NAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Query: 526 AKR 528
A +
Sbjct: 734 AAQ 736
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 144/337 (42%), Gaps = 31/337 (9%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
+++ F+E E++ +W+++++ L +N A + F M ++ + + I+
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE---- 212
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
+ G + + +V +S V Y + G+++ A ++F EMPERN+VSW+ M
Sbjct: 213 ----NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 237 ICAYALLGEDENALKLFKEAL--LEDLSVNDFTFSSVIRVCG--NSTLLELGRQIHGLCL 292
I +A AL LF E ++ +S N T S+ CG LG Q+H +
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
Query: 293 KTSY---DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
+ D G+I +A + NE+ +L N ++ ++ E
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES--FDLQSCNIIINRYLKNGDLER 386
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ--QYFGLMKDYGIEPGAQHYATM 407
LF+R+K++ + ++ + + G ++ G + FGL + + G + M
Sbjct: 387 AETLFERVKSLHDKVSWTSMI--------DGYLEAGDVSRAFGLFQKLHDKDGVT-WTVM 437
Query: 408 VDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLT 441
+ L + EA ++ M ++P S + L+
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 81 KGQQIHAHIIKSSLQSIP--LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS 138
+G+ IH I K++ P ++ + L++ Y+K + + F + +K +W+S+I
Sbjct: 484 QGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSI-----HAFVVKT 193
L+ + L A+ F++M+ +P+ F + AC+ G G + + ++
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
G D + S +D+ G+ G++K A + +P
Sbjct: 604 GIDHYI----SMIDLLGRAGKLKEAEEFISALP 632
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 213/432 (49%), Gaps = 44/432 (10%)
Query: 130 TTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF 189
TW+SV+S +Q ++YF M + CA L I + +H +
Sbjct: 260 VTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGY 319
Query: 190 VVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENA 249
V+K GF+ + ++ + +YGK G++K+A +F ++ + + SW+ +I ++ G+ + A
Sbjct: 320 VIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEA 379
Query: 250 LKLFKEALLEDLS------VNDFTFSSVIRVC-----GNSTL------------------ 280
L LF E LE+++ N T++SVI+ C G+ +L
Sbjct: 380 LSLFSE--LEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 281 ------------LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI 328
L LGR+IHG ++TS KCG++ S VF
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 329 RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ- 387
++L WNS++ H E+ +FDRM + G P+ I + +L ACSH GL++KG++
Sbjct: 498 KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
++ + K +G+EP +HYA +VDLLGR G L+EA +I+K MP+EP V GA L CR+H
Sbjct: 558 FYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHK 617
Query: 448 DAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
+ ++A A ++ L +G +LLSN + + + +KK +G SWI
Sbjct: 618 NVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWI 677
Query: 508 EEGNRVHTFAAG 519
E + + F++G
Sbjct: 678 EVKKKKYKFSSG 689
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 193/468 (41%), Gaps = 85/468 (18%)
Query: 83 QQIHAHIIKSSL--QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQE---KSATTWSSVIS 137
+Q+HA ++ S +S L ++ LI+ Y++ L + + FE W+S++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+ + L A+E +R M + D +I P ++AC LGR + ++ H V++ G
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
++ V + + +Y K G + +A +F EMP RN +SW+ MI ++ + E+A+K+F+
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 258 LEDLSVNDFTFSSVI-----------------------------------RVCGNSTLLE 282
E+ ++ T++SV+ VC L
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 283 LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM--WNSMLIA 340
+ ++HG +K ++ K G ++ A +F + IRN G+ WNS++ +
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ--IRNKGIESWNSLITS 369
Query: 341 CAQHAHTEEVFKLFDRMKNV----GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK--- 393
+E LF ++ + ++ N +T+ ++ C+ G D +YF M+
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 394 ---------------------DYGIEPGAQHYAT-----------MVDLLGRAGKLQEAL 421
+ G E T +V++ + G L E
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 422 DIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
+ +A+ + S W + + G +HG AE A DR+ G G+
Sbjct: 490 LVFEAIRDKDLIS-WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 117 SLQAFEEAQE--------KSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFP 168
+L F E +E + TW+SVI ++EYFRQM + +
Sbjct: 379 ALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTIC 438
Query: 169 SAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
+ CA L ++G+ IH V++T ++ V ++ V+MY KCG + VF+ + ++
Sbjct: 439 CILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK 498
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI- 287
+++SW+ +I Y + G E AL +F + + +V+ C ++ L+E GR+I
Sbjct: 499 DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIF 558
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAH 346
+ + + + + G ++ AS + P+ + + ++L +C H +
Sbjct: 559 YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKN 618
Query: 347 TE 348
+
Sbjct: 619 VD 620
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 146/362 (40%), Gaps = 49/362 (13%)
Query: 146 SLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF----V 201
++++ + + +N + H F + C +C + +HA V+ + F +F +
Sbjct: 38 TVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQC---RQVHAQVLLSDF---IFRSGSL 91
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPE---RNVVSWSGMICAYALLGEDENALKLFKEALL 258
++ + +Y + G + +AR VF+ + ++ W+ ++ A G ENAL+L++
Sbjct: 92 AANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQ 151
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
L+ + + ++R C L R H ++ K G +
Sbjct: 152 RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A +F E P+RN WN M+ +Q E K+F+ M+ +P+ +T+ +L S
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 379 GGLIDKGQQYFGLMK-------------------------------DYGIEPGAQHYA-- 405
G + +YF LM+ Y I+ G + Y
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPS 331
Query: 406 --TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
++ + G+ GK+++A + + + + ES W + +T G + A + E+
Sbjct: 332 RNALIHVYGKQGKVKDAEHLFRQIRNKGIES-WNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 464 HV 465
HV
Sbjct: 391 HV 392
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G++IH H+I++S+ LV + L+N Y+K L FE ++K +W+S+I
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGM 512
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSI-HAFVVKTGFDVDVF 200
+ A+ F +MI PD + + AC+ G + G+ I ++ + G +
Sbjct: 513 HGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQE 572
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMP 226
+ VD+ G+ G +K A ++ MP
Sbjct: 573 HYACIVDLLGRVGFLKEASEIVKNMP 598
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 166/319 (52%), Gaps = 5/319 (1%)
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL-LEDLSVNDFTFS 269
K GE A+KV ++NV++W+ MI Y + E ALK K L D+ N F+F+
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 270 SVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR 329
S + C L + +H L + + + KCG I + VF
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 330 NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF 389
++ +WN+M+ A H E ++F M+ + P+ ITFL LL CSH GL+++G++YF
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 390 GLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGD 448
GLM + + I+P +HY MVDLLGRAG+++EA ++I++MPIEP +W + L+ R + +
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Query: 449 AELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIE 508
EL A I L SG VLLSN +++ G++K G SW+E
Sbjct: 350 PELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Query: 509 EGNRVHTFAAGDRSHEKAK 527
G +H F AGD SH + K
Sbjct: 407 FGGMIHRFKAGDTSHIETK 425
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 3/233 (1%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAIL 177
+ A +++ TW+ +I +N A++ + M+ +I+P+ F S++ ACA L
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 178 GRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMI 237
G K +H+ ++ +G +++ + S+ VD+Y KCG+I +R+VF + +V W+ MI
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 238 CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SY 296
+A G A+++F E E +S + TF ++ C + LLE G++ GL + S
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSI 298
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
+ G ++ A + PI ++ +W S+L + + + E
Sbjct: 299 QPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPE 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
+ +H+ +I S ++ ++S L++ Y+K S + F + + W+++I+ A
Sbjct: 184 AKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L + AI F +M +++ PD F + C+ G + GK + + F + +
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR-FSIQPKL 302
Query: 202 G--SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICA 239
+ VD+ G+ G +K A ++ + MP E +VV W ++ +
Sbjct: 303 EHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 205/427 (48%), Gaps = 2/427 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +H ++K + + V L+ YS+ V + + + A++ S +S++S A+
Sbjct: 156 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 215
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
+A+ YF + ++ D + C DIG S+H + +K+G V
Sbjct: 216 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 275
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ + MY K +++ +F+++ E ++SW+ +I G A ++F + +L
Sbjct: 276 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 335
Query: 263 VND-FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ D T +S++ C L LG+++HG L+ +++ KCG A
Sbjct: 336 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 395
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF WNSM+ + + M+ G++P+ ITFL +L AC+HGG
Sbjct: 396 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 455
Query: 382 IDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFL 440
+D+G+ F ++K++GI P QHYA MV LLGRA EAL +I M I+P +VWGA L
Sbjct: 456 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 515
Query: 441 TGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKK 500
+ C +H + E+ + A ++F L + + G+ VL+SN M++D G
Sbjct: 516 SACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDG 575
Query: 501 ETGLSWI 507
G+S I
Sbjct: 576 YLGVSQI 582
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 162/368 (44%), Gaps = 8/368 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +H KS L+ V + LI+FYSK + F E ++KS +W+++I + +
Sbjct: 59 QGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYS 118
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q+ L AI F+ M N+ S + +L + +H VVK G D+
Sbjct: 119 QSGLQEEAITVFKNMFEKNVE------ISPVTIINLLSAHVSHEPLHCLVVKCGMVNDIS 172
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S V Y +CG + +A +++ + ++V + ++ YA G+ + A+ F +
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ++ ++ C S+ +++G +HG +K+ K +E
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK-NVGMRPNFITFLCLLYACSHG 379
+F + L WNS++ C Q F++F +M G+ P+ IT LL CS
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
++ G++ G E ++D+ + G +A + K++ P + W +
Sbjct: 353 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSM 411
Query: 440 LTGCRLHG 447
++G L G
Sbjct: 412 ISGYSLSG 419
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H + IKS L + LV + LI YSK L FE+ QE +W+SVIS Q
Sbjct: 256 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 315
Query: 142 NELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ S A E F QM++ + PD S + C+ L ++GK +H + ++ F+ + F
Sbjct: 316 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF 375
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V ++ +DMY KCG A VF + +W+ MI Y+L G AL + E +
Sbjct: 376 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 435
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGR 285
L ++ TF V+ C + ++ G+
Sbjct: 436 LKPDEITFLGVLSACNHGGFVDEGK 460
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 138/327 (42%), Gaps = 7/327 (2%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
E+ W+++I ++N A + F M+ P + + C G G+S
Sbjct: 3 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 62
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE 245
+H K+G ++D V ++ + Y KC E+ +A +F EM +++ VSW+ MI AY+ G
Sbjct: 63 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 122
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
E A+ +FK +++ ++ T +++ + +H L +K
Sbjct: 123 QEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTS 176
Query: 306 XXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
+CG + +A R++ A ++ S++ A+ + F + + + M+ +
Sbjct: 177 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 236
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
+ + +L+ C ID G G G+ ++ + + ++ L + +
Sbjct: 237 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 296
Query: 426 AMPIEPTESVWGAFLTGCRLHGDAELA 452
+ P S W + ++GC G A A
Sbjct: 297 QLQETPLIS-WNSVISGCVQSGRASTA 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 225 MPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELG 284
MPER+ V W+ +IC Y+ G + +A KLF L + S + T +++ CG + G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 285 RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQH 344
R +HG+ K+ + KC + +A +F E ++ WN+M+ A +Q
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 345 AHTEEVFKLFDRM--KNVGMRPNFITFLCLLYA 375
EE +F M KNV + P +T + LL A
Sbjct: 121 GLQEEAITVFKNMFEKNVEISP--VTIINLLSA 151
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 218/458 (47%), Gaps = 34/458 (7%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
+IHAH+++ L L+ H I+ ++ + F Q + ++++I +
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGS 203
P ++ +F M I D++ + +K+C+ L GK +H +++TGF +
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 204 STVDMYGKCGEIKNARKVFDEMPERNVV-------------------------------S 232
V++Y G + +A+KVFDEM ERNVV S
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
W+ MI + + G D AL+LF E + + ++ T +V+ + + +L+ G+ IH
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 293 KTS-YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVF 351
+ + K G +EAA+ +F + RN+ WN+++ A + E
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 352 KLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVD 409
LFD M G + PN TFL +L CS+ G +++G++ FGLM + + +E +HY MVD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGM 469
L+ R+G++ EA +K MP+ ++WG+ L+ CR HGD +LA AA + ++ +SG
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 470 NVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
VLLSN +++ ++K TG S I
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 191/374 (51%), Gaps = 8/374 (2%)
Query: 158 DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG-FDVDVFVGSSTVDMYGKCGEIK 216
++I P F I AC +GK IH +VVK G F D V + + +Y + +
Sbjct: 7 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 66
Query: 217 NARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCG 276
+ARKVFDE+P+ +VV W ++ Y G L++F+E L++ L ++F+ ++ + C
Sbjct: 67 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 126
Query: 277 NSTLLELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWN 335
L G+ IH K S+ + KCG IE A VF + RN+ W
Sbjct: 127 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 186
Query: 336 SMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK- 393
+++ A + + ++ +R+ + G++P+ + L +L AC+HGG +++G+ M+
Sbjct: 187 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 246
Query: 394 DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAA 453
Y I P +HY+ +VDL+ RAG+L +AL++I+ MP++P SVWGA L GCR H + EL
Sbjct: 247 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 306
Query: 454 FAADRIFEL--GHVSSGMNVL--LSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEE 509
A + +L G+V L LSN M+ RGV+K G S +E
Sbjct: 307 LAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 366
Query: 510 GNRVHTFAAGDRSH 523
V F +GD SH
Sbjct: 367 DGNVTKFVSGDVSH 380
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 7/273 (2%)
Query: 82 GQQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH ++K+ + S V ++ Y + +L + + + F+E + W +++
Sbjct: 32 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYV 91
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF-DVDV 199
+ L S +E FR+M++ + PD+ +A+ ACA +G GK IH FV K + + DV
Sbjct: 92 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 151
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FVG++ VDMY KCG I+ A +VF ++ RNV SW+ +I YA G + A+ + E
Sbjct: 152 FVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE 211
Query: 260 D-LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKC--GVI 316
D + + V+ C + LE GR + ++ Y+ C G +
Sbjct: 212 DGIKPDSVVLLGVLAACAHGGFLEEGRSMLE-NMEARYEITPKHEHYSCIVDLMCRAGRL 270
Query: 317 EAASRVFNEAPIRNLG-MWNSMLIACAQHAHTE 348
+ A + + P++ L +W ++L C H + E
Sbjct: 271 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVE 303
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 217/466 (46%), Gaps = 71/466 (15%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +HAH++ S + + ++ L+ FY + + + + F+E ++ + +I + A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH-----------AF 189
+N ++++FR+M D ++ D I PS +KA L + GK IH AF
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 190 VVKTGFDV--------------------DVFVGSSTVDMYGKCGEIKNARKVFDEM---- 225
+V + D+ D+ V ++ + Y + A + +M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 226 --PE--------------RN-------------------VVSWSGMICAYALLGEDENAL 250
P+ RN VVSW+ +I ++E A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 251 KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
FK+ L L N T +++ C ++ G++IHG + T +
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 311 XKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
KCG I A +F + P + +NSM+ A H ++ +LFD+M+ G + + +TF
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 371 CLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPI 429
+L ACSH GL D GQ F LM++ Y I P +HYA MVDLLGRAGKL EA ++IKAM +
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 430 EPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSN 475
EP VWGA L CR HG+ ELA AA + EL +SG +LL++
Sbjct: 454 EPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTS 499
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 203/440 (46%), Gaps = 6/440 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H + + L V + L+N Y K + F+ + + TW+ +I+ +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A+E R M + +RP+ S + C + + GK +H + V+ D+ +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+S + MY KC + +VF + + WS +I +AL LFK ED+
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N T +S++ L IH KT + KCG +E+A +
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 322 VFN----EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
+FN + +++ +W +++ H ++F M G+ PN ITF L ACS
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 378 HGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
H GL+++G F M + Y + HY +VDLLGRAG+L EA ++I +P EPT +VW
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
GA L C H + +L AA+++FEL ++G VLL+N M+ +
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENV 656
Query: 497 GVKKETGLSWIE-EGNRVHT 515
G++K+ G S IE N V T
Sbjct: 657 GLRKKPGHSTIEIRSNSVDT 676
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 169/375 (45%), Gaps = 5/375 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H I++S V + L+ Y + F+ + + +W+++IS +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N + A+ F M+ +++ D S + C L ++G+++H V + + V
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ V+MY KCG + AR VFD M R+V++W+ MI Y G+ ENAL+L + E +
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N T +S++ VCG++ + G+ +HG ++ KC ++ R
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ A + G W++++ C Q+ + LF RM+ + PN T LL A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES----VWG 437
+ + + G +V + + G L+ A I + E +S +WG
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ-EKHKSKDVVLWG 494
Query: 438 AFLTGCRLHGDAELA 452
A ++G +HGD A
Sbjct: 495 ALISGYGMHGDGHNA 509
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 12/369 (3%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQL----PVFSLQAFEEAQEKSATTWSSVI 136
K + +H H+I VS H+++ S T ++ + FEE + S +++ VI
Sbjct: 33 KTKALHCHVITGGR-----VSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVI 87
Query: 137 SSLAQNELPSLAIEYFRQMIIDNIR--PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
+ L AI F +M+ + ++ PD + +P KA L +G +H ++++
Sbjct: 88 RMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSW 147
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
F D +V ++ + MY G+++ AR VFD M R+V+SW+ MI Y G +AL +F
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 255 EALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
+ E + ++ T S++ VCG+ LE+GR +H L + KCG
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
++ A VF+ R++ W M+ + E +L M+ G+RPN +T L+
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
C ++ G+ G + +++ + + ++ + T
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT-G 386
Query: 435 VWGAFLTGC 443
W A + GC
Sbjct: 387 PWSAIIAGC 395
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATT----WSSVI 136
+ IH ++ K+ S + L++ YSK + + F QEK + W ++I
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALI 497
Query: 137 SSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV---KT 193
S + A++ F +M+ + P++ F SA+ AC+ G + G ++ F++ KT
Sbjct: 498 SGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKT 557
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICA 239
+ + + VD+ G+ G + A + +P E W ++ A
Sbjct: 558 LARSNHY--TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 206/429 (48%), Gaps = 13/429 (3%)
Query: 116 FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNI------RPDDHIFPS 169
F++Q F + W+++I A + PSLA ++R M+ + R D
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN 229
+KACA +H + + G D + ++ +D Y K G++ +A K+FDEMP R+
Sbjct: 115 TLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD 174
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI-H 288
V SW+ +I A++L+K E + ++ T + + C + ++ G I H
Sbjct: 175 VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH 234
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE-APIRNLGMWNSMLIACAQHAHT 347
G + KCG ++ A +VF + +++ WN+M+ A H
Sbjct: 235 GYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA 289
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
++FD++++ G++P+ +++L L AC H GL++ G F M G+E +HY +
Sbjct: 290 HRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCV 349
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSS 467
VDLL RAG+L+EA DII +M + P +W + L ++ D E+A A+ I E+G +
Sbjct: 350 VDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNND 409
Query: 468 GMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEKAK 527
G VLLSN + + VKK GLS+IE +H F D+SHE+ +
Sbjct: 410 GDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWR 469
Query: 528 RNLSEIGGI 536
+I I
Sbjct: 470 EIYEKIDEI 478
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 111/206 (53%), Gaps = 7/206 (3%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q+H I + L + L+ L++ YSK + + + F+E + +W+++I+ L
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD-VFVG 202
S A+E +++M + IR + +A+ AC+ LG G++I G+ D V V
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVS 244
Query: 203 SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ +DMY KCG + A +VF++ +++VV+W+ MI +A+ GE AL++F + +
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQI 287
+D ++ + + C ++ L+E G +
Sbjct: 305 KPDDVSYLAALTACRHAGLVEYGLSV 330
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 12/463 (2%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV---FSLQAFEEAQEKSATTWSSVISSL 139
+QIHA ++++SL V HH ++ + + +P +S + F + + + +++I +
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPS-AIKACAILGRCDIGKSIHAFVVKTGFDVD 198
+ ++ P FR + ++ P + + S A+K C G G IH + GF D
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF---KE 255
+ ++ +D+Y C +A KVFDE+P+R+ VSW+ + Y + L LF K
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 207
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
+ + + T ++ C N L+ G+Q+H + +CG
Sbjct: 208 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
++ A +VF RN+ W +++ A + +E + F+ M G+ P T LL A
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 376 CSHGGLIDKGQQYFGLMK--DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
CSH GL+ +G +F M+ ++ I+P HY +VDLLGRA L +A +IK+M ++P
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 434 SVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKML 493
++W L CR+HGD EL + EL +G VLL N ++
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 494 RDRGVKKETGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
+++ + + G S IE VH F D SH E+ + L+EI
Sbjct: 448 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G QIH I S L+ L++ YS + + + F+E ++ +W+ + S +
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 142 NELPSLAIEYFRQMIID---NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
N+ + F +M D ++PD A++ACA LG D GK +H F+ + G
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ + ++ V MY +CG + A +VF M ERNVVSW+ +I A+ G + A++ F E L
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELG 284
+S + T + ++ C +S L+ G
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEG 337
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 212/460 (46%), Gaps = 33/460 (7%)
Query: 95 QSIPLVSHHLINFYSKTQLPVFSL-----------QAFEEAQEKSATTWSSVISSLAQNE 143
+S L++H + S Q+ +F + + F E EK+ W+S+I+ N+
Sbjct: 14 ESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNK 73
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV----DV 199
A YF ++ P+ I + I G ++G + A ++ FD DV
Sbjct: 74 DLVSARRYF------DLSPERDI---VLWNTMISGYIEMGNMLEA---RSLFDQMPCRDV 121
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
++ ++ Y G+++ +VFD+MPERNV SW+G+I YA G L FK + E
Sbjct: 122 MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDE 181
Query: 260 DLSV-NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX-KCGVIE 317
V ND T + V+ C + G+ +H Y+ KCG IE
Sbjct: 182 GSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIE 241
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A VF R+L WN+M+ A H H E LF MKN G+ P+ +TF+ +L AC
Sbjct: 242 IAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACK 301
Query: 378 HGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
H GL++ G YF M D+ I P +H +VDLL RAG L +A++ I MP++ +W
Sbjct: 302 HMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIW 361
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDR 496
L +++ ++ A + + +L + V+LSN +RD
Sbjct: 362 ATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDT 421
Query: 497 GVKKETGLSWIEEGNRVHTFAAGDRSH---EKAKRNLSEI 533
G KKE G+SWIE + + F + H E+ +R L E+
Sbjct: 422 GFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 208/432 (48%), Gaps = 18/432 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G +H +++ +V ++FY K + + + F E E++A +W++++ + +
Sbjct: 129 GSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFD----V 197
+ A F M N+ + + +K+ G ++A K FD
Sbjct: 189 SGELEEAKSMFDLMPERNLGSWNALVDGLVKS---------GDLVNA---KKLFDEMPKR 236
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
D+ +S +D Y K G++ +AR +F+E +V +WS +I YA G+ A K+F E
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG-LCLKTSYDXXXXXXXXXXXXXXKCGVI 316
+++ ++F ++ C EL ++ L + + KCG +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+ A+++F E P R+L + SM+ A H E +LF++M + G+ P+ + F +L C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 377 SHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
L+++G +YF LM K Y I HY+ +V+LL R GKL+EA ++IK+MP E S
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
WG+ L GC LHG+ E+A A +FEL S+G VLLSN + +
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNE 536
Query: 496 RGVKKETGLSWI 507
G+ K G SWI
Sbjct: 537 NGITKICGRSWI 548
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 182/390 (46%), Gaps = 32/390 (8%)
Query: 83 QQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
QIHA II+ L Q L+S + + S + +S FE W+ +I +
Sbjct: 27 NQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSN 86
Query: 142 NELPSLAIEYFRQMIIDNI-RPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
L + +M+ + RPD++ FP +K C+ G+ +G S+H V++ GFD DV
Sbjct: 87 KFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+S VD YGKC ++ +ARKVF EMPERN VSW+ ++ AY GE E A +F +
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX----XKCGVI 316
L ++++++ L++ G ++ K +D K G +
Sbjct: 207 LG----SWNALV-----DGLVKSGDLVNA---KKLFDEMPKRDIISYTSMIDGYAKGGDM 254
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+A +F EA ++ W+++++ AQ+ E FK+F M ++P+ + L+ AC
Sbjct: 255 VSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSAC 314
Query: 377 SHGG---LIDKGQQYFGLMKDYGIEPGAQHYAT--MVDLLGRAGKLQEALDIIKAMPIEP 431
S G L +K Y + + HY ++D+ + G + A + + MP
Sbjct: 315 SQMGCFELCEKVDSYL----HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 432 TESVWGAFLTGCRLHGDAELAAFAADRIFE 461
S + + + G +HG A R+FE
Sbjct: 371 LVS-YCSMMEGMAIHG----CGSEAIRLFE 395
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 187/365 (51%), Gaps = 26/365 (7%)
Query: 169 SAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER 228
SA KA ++ GR IHA V K GF+ + + +S V Y G++ AR+VFDE PE+
Sbjct: 75 SAQKASSLDGR-----QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK 129
Query: 229 -NVVSWSGMICAYALLGEDEN---ALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELG 284
N+V W+ MI AY E+EN A++LFK E + ++ + + C + +++G
Sbjct: 130 QNIVLWTAMISAYT---ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMG 186
Query: 285 RQIHGLCLKTSYDXXX--XXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
+I+ +K K G E A ++F+E+ +++ + SM+ A
Sbjct: 187 EEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA 246
Query: 343 QHAHTEEVFKLFDRMKNVG------MRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDY 395
+ +E +LF +MK + + PN +TF+ +L ACSH GL+++G+++F ++ DY
Sbjct: 247 LNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDY 306
Query: 396 GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFA 455
++P H+ MVDL R+G L++A + I MPI+P +W L C LHG+ EL
Sbjct: 307 NLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEV 366
Query: 456 ADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKET-GLSWIEEGNRVH 514
RIFEL G V LSN +RDR K+ G SWIE G+ ++
Sbjct: 367 QRRIFELDRDHVGDYVALSNIYASKGMWDEKSK----MRDRVRKRRMPGKSWIELGSIIN 422
Query: 515 TFAAG 519
F +G
Sbjct: 423 EFVSG 427
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 147/279 (52%), Gaps = 13/279 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK-SATTWSSVISSLA 140
G+QIHA + K ++ + L+ FYS ++ Q F+E EK + W+++IS+
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG--FDVD 198
+NE AIE F++M + I D I A+ ACA LG +G+ I++ +K +D
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ + +S ++MY K GE + ARK+FDE ++V +++ MI YAL G+ + +L+LFK+
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 259 ED------LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
D ++ ND TF V+ C +S L+E G++ H + Y+
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 313 C--GVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTE 348
C G ++ A N+ PI+ N +W ++L AC+ H + E
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 198/411 (48%), Gaps = 34/411 (8%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IHA +K S+ + +VS + + Y K + + F++ + K +W+S +S A
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAM 341
Query: 142 NELPSLAIEYFRQMIIDNI-------------------------------RPDDHIFPSA 170
+ L A E F M NI D+
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE-RN 229
+ C+ + +GK H F+ + G+D +V V ++ +DMYGKCG +++A F +M E R+
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
VSW+ ++ A +G E AL F E + + + +T ++++ C N L LG+ IHG
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
++ Y KC + A VF EA R+L +WNS++ C ++ ++E
Sbjct: 521 FLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKE 580
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMV 408
VF+LF ++N G++P+ +TFL +L AC G ++ G QYF M Y I P +HY M+
Sbjct: 581 VFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMI 640
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRI 459
+L + G L + + + MP +P + C+ + ++L A+AA R+
Sbjct: 641 ELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 186/403 (46%), Gaps = 31/403 (7%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+ +++ +H++ S + + I Y K + + FEE E+ +W++VI++ A
Sbjct: 79 QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA 138
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN + FR+M D +R + F +K+C ++ + + +H VVK G+ +V
Sbjct: 139 QNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVD 198
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +S VD+YGKC + +AR+VFDE+ + VSW+ ++ Y +G ++ A+ +F + L +
Sbjct: 199 LETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELN 258
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + T SSV+ C S LE+G+ IH + +K S KC +E+A
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESAR 318
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNVG----------------- 361
RVF++ ++L W S + A T E +LFD M +N+
Sbjct: 319 RVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 362 -------MRPNF-----ITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVD 409
MR +T + +L CS + G+Q G + +G + ++D
Sbjct: 379 ALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD 438
Query: 410 LLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ G+ G LQ A + M E W A LTG G +E A
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 177/400 (44%), Gaps = 34/400 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q+H ++K + +++ Y K ++ + + F+E S +W+ ++ +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A+ F +M+ N+RP +H S + AC+ ++GK IHA VK D V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 203 SSTVDMYGKCGEIKNARKVFDE-------------------------------MPERNVV 231
+S DMY KC +++AR+VFD+ MPERN+V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
SW+ M+ Y E + AL E ++++ T ++ VC + +++G+Q HG
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE-APIRNLGMWNSMLIACAQHAHTEEV 350
+ YD KCG +++A+ F + + +R+ WN++L A+ +E+
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
F+ M+ V +P+ T LL C++ ++ G+ G + G + MVD+
Sbjct: 482 LSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 411 LGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
+ A+++ K +W + + GC +G ++
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDL-ILWNSIIRGCCRNGRSK 579
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 198/383 (51%), Gaps = 2/383 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH + IK+ ++S + +I+ Y+K +L+AFE K A ++++ Q
Sbjct: 420 GKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQ 479
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ A + ++ M + + PD ++ CA G ++ ++K GFD + V
Sbjct: 480 IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHV 539
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ ++M+ KC + A +FD+ E++ VSW+ M+ Y L G+ E A+ F++ +E
Sbjct: 540 AHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK 599
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
N TF +++R + L +G +H ++ + KCG+IE++
Sbjct: 600 FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSE 659
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+ F E + + WN+ML A A H LF M+ ++P+ ++FL +L AC H G
Sbjct: 660 KCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAG 719
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L+++G++ F M + + IE +HYA MVDLLG+AG EA+++++ M ++ + VWGA
Sbjct: 720 LVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGAL 779
Query: 440 LTGCRLHGDAELAAFAADRIFEL 462
L R+H + L+ A ++ +L
Sbjct: 780 LNSSRMHCNLWLSNAALCQLVKL 802
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 2/368 (0%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
+H +IK I S LI+ Y + FEE K ++W +++++ A N
Sbjct: 223 LHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
+E F M ++R + SA++A A +G G +IH + V+ G DV V +S
Sbjct: 281 FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATS 340
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
+ MY KCGE++ A ++F + +R+VVSWS MI +Y G+ + A+ LF++ + + N
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
T +SV++ C LG+ IH +K + KCG A + F
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
PI++ +N++ Q + F ++ MK G+ P+ T + +L C+ +
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR 520
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCR 444
G +G + +G + ++++ + L A+ + E + W + G
Sbjct: 521 GSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 445 LHGDAELA 452
LHG AE A
Sbjct: 581 LHGQAEEA 588
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 163/373 (43%), Gaps = 2/373 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG IH + ++ L V+ L++ YSK + Q F +++ +WS++I+S
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q AI FR M+ +I+P+ S ++ CA + +GKSIH + +K + ++
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
++ + MY KCG A K F+ +P ++ V+++ + Y +G+ A ++K L
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + T +++ C + G ++G +K +D KC + AA
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 321 RVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
+F++ ++ WN M+ H EE F +MK +PN +TF+ ++ A +
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ G + G ++VD+ + G ++ + + + S W
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS-WNTM 676
Query: 440 LTGCRLHGDAELA 452
L+ HG A A
Sbjct: 677 LSAYAAHGLASCA 689
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 164/373 (43%), Gaps = 5/373 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG +IH I + L+S + L+ Y K + V + Q F++ K TW++++S LA
Sbjct: 118 KGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLA 177
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN S A+ F M + D + I A + L + D+ + +H V+K GF +F
Sbjct: 178 QNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IF 234
Query: 201 VGSS-TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
SS +DMY C ++ A VF+E+ ++ SW M+ AYA G E L+LF
Sbjct: 235 AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
D+ +N +S ++ L G IH ++ KCG +E A
Sbjct: 295 DVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIA 354
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
++F R++ W++M+ + Q +E LF M + ++PN +T +L C+
Sbjct: 355 EQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
G+ IE + ++ + + G+ AL + +PI+ + + A
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA-FNAL 473
Query: 440 LTGCRLHGDAELA 452
G GDA A
Sbjct: 474 AQGYTQIGDANKA 486
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 22/366 (6%)
Query: 84 QIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
Q+H +I S L+ + LIN YS Q S F+ ++ W+S+I +
Sbjct: 23 QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 144 LPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKS--IHAFVVKTGFDVDVF 200
L A+ +F M + I PD + F A+KACA G D K IH + + G + DV+
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+G++ V+MY K ++ +AR+VFD+M ++VV+W+ M+ A G AL LF +
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ++ + ++I ++ R +HGL +K + C + AA
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAE 254
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
VF E ++ W +M+ A A + EEV +LFD M+N +R N + L A ++ G
Sbjct: 255 SVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVG 314
Query: 381 LIDKGQQYFGLMKDYGIEPG----AQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV- 435
+ KG + DY ++ G +++ + + G+L+ A + + IE + V
Sbjct: 315 DLVKGIA----IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF--INIEDRDVVS 368
Query: 436 WGAFLT 441
W A +
Sbjct: 369 WSAMIA 374
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQ-EKSATTWSSVISSL 139
+G ++ IIK S V+H LIN ++K ++ F++ EKS +W+ +++
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ A+ FRQM ++ +P+ F + ++A A L +G S+H+ +++ GF
Sbjct: 580 LLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQT 639
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
VG+S VDMY KCG I+++ K F E+ + +VSW+ M+ AYA G A+ LF
Sbjct: 640 PVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN 699
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQI 287
+L + +F SV+ C ++ L+E G++I
Sbjct: 700 ELKPDSVSFLSVLSACRHAGLVEEGKRI 727
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 210/434 (48%), Gaps = 41/434 (9%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H +KS + V L++ YS+ V + + FE+ KS T+++ IS L +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 142 NELPSLAIEYFRQM-IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N + +L F M + P+D F +AI ACA L G+ +H V+K F +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPE-RNVVSWSGMICAYALLGEDENALKLFKEALLE 259
VG++ +DMY KC K+A VF E+ + RN++SW+ +I + G+ E A++LF++ E
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 260 DLSVNDFTFSSVIR-----------------------------------VCGNSTLLELG 284
L + T++S+I C + L+ G
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 285 RQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN--EAPIRNLGMWNSMLIACA 342
++IHG +K + + KCG+ A R+F+ E ++ WN M+
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGA 401
+H E ++F+ ++ + P+ TF +L ACSH G ++KG Q F LM+ +YG +P
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
+H M+DLLGR+G+L+EA ++I M + + L CR H D L AA ++ E
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAE 566
Query: 462 LGHVSSGMNVLLSN 475
L + V+LS+
Sbjct: 567 LEPENPAPFVILSS 580
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 178/422 (42%), Gaps = 49/422 (11%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +HA ++K+ + L++ Y K + +L+ +E E+ + ++ +S L
Sbjct: 49 QGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLL 108
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+N A F + + S + C G + G +H +K+GF+++V+
Sbjct: 109 ENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVY 165
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+S V MY +CGE A ++F+++P ++VV+++ I G +F L+
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFN--LMRK 223
Query: 261 LSV---NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
S ND TF + I C + L+ GRQ+HGL +K + KC +
Sbjct: 224 FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 318 AASRVFNE-APIRNL--------GM---------------------------WNSMLIAC 341
+A VF E RNL GM WNS++
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
+Q E FK F+RM +V M P+ LL ACS + G++ G + E
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV-WGAFLTGCRLHGDAELAAFAADRIF 460
+++D+ + G A I +P + V W ++G HG+ E +A IF
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECE----SAIEIF 459
Query: 461 EL 462
EL
Sbjct: 460 EL 461
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 4/298 (1%)
Query: 156 IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEI 215
+I + P+ FP +K+CA LG G+ +HA VVKTGF VDVF ++ V MY K ++
Sbjct: 23 VILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQV 82
Query: 216 KNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
+A KV DEMPER + S + + G +A ++F +A + +N T +SV+ C
Sbjct: 83 TDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 276 GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWN 335
G+ +E G Q+H L +K+ ++ +CG A+R+F + P +++ +N
Sbjct: 143 GD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 336 SMLIACAQHAHTEEVFKLFDRMKNVGM-RPNFITFLCLLYACSHGGLIDKGQQYFGLMKD 394
+ + ++ V +F+ M+ PN +TF+ + AC+ + G+Q GL+
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 395 YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ ++D+ + + A + + W + ++G ++G E A
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 38/395 (9%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH +IK+ ++ ++ + LI+FY+K S F+ ++K+ W++++S A
Sbjct: 335 GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ P + + F QM+ RP ++ F +A+K+C + + +H+ +V+ G++ + +V
Sbjct: 395 KDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYV 449
Query: 202 GSSTVDMYGKC--------------------------------GEIKNARKVFDEMPERN 229
SS + Y K G+ + K+ + + +
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPD 509
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
VSW+ I A + E ++LFK L ++ + +TF S++ +C L LG IHG
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 290 LCLKTSYDXXXXXXXXXXXXXX-KCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTE 348
L KT + KCG I + +VF E +NL W +++ H + +
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
E + F ++G +P+ ++F+ +L AC HGG++ +G F MKDYG+EP HY V
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAV 689
Query: 409 DLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
DLL R G L+EA +I+ MP VW FL GC
Sbjct: 690 DLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 132/296 (44%), Gaps = 2/296 (0%)
Query: 82 GQQIHAHIIKSSL-QSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G Q+H +K L + V L+ Y + L + Q FE+ KS TW+ ++S L
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ +FR+++ + F +K + + DI K +H K G D ++
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V +S + YGKCG A ++F + ++VSW+ +ICA A ALKLF
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
S N T+ SV+ V LL GRQIHG+ +K + KCG +E +
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
F+ +N+ WN++L A + LF +M +G RP TF L +C
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 2/234 (0%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
S++ ++ +W+ I++ ++++ IE F+ M+ NIRPD + F S + C+
Sbjct: 498 SVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 177 LGRCDIGKSIHAFVVKTGFD-VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSG 235
L +G SIH + KT F D FV + +DMYGKCG I++ KVF+E E+N+++W+
Sbjct: 558 LCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTA 617
Query: 236 MICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS 295
+I + G + AL+ FKE L + +F S++ C + +++ G +
Sbjct: 618 LISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYG 677
Query: 296 YDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI-RNLGMWNSMLIACAQHAHTE 348
+ + G ++ A + E P + +W + L C + A +
Sbjct: 678 VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQ 731
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 167/365 (45%), Gaps = 18/365 (4%)
Query: 88 HIIKSSLQSIPL----VSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNE 143
H + +L S+ L V +++I+ Y K + + F++ E++ +++++I ++
Sbjct: 35 HALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYG 94
Query: 144 LPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDI--GKSIHAFVVKTG-FDVDVF 200
A F +M P+ S + +CA L D+ G +H +K G F D F
Sbjct: 95 DVDKAWGVFSEMRYFGYLPNQSTV-SGLLSCASL---DVRAGTQLHGLSLKYGLFMADAF 150
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+ + +YG+ ++ A +VF++MP +++ +W+ M+ G + + F+E +
Sbjct: 151 VGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMG 210
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
S+ + +F V++ L++ +Q+H K D KCG A
Sbjct: 211 ASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAE 270
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+F +A ++ WN+++ A A+ + + KLF M G PN T++ +L S
Sbjct: 271 RMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQ 330
Query: 381 LIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA---LDIIKAMPIEPTESVWG 437
L+ G+Q G++ G E G ++D + G L+++ D I+ I W
Sbjct: 331 LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI----VCWN 386
Query: 438 AFLTG 442
A L+G
Sbjct: 387 ALLSG 391
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 201/448 (44%), Gaps = 41/448 (9%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G ++H+ +K LV + L++ YSK + + F+ + K TW+S+I+
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q A E F +M N+RP+ +
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPN-----------------------------------II 454
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMP-----ERNVVSWSGMICAYALLGEDENALKLFKE 255
++ + Y K G+ A +F M +RN +W+ +I Y G+ + AL+LF++
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
N T S++ C N ++ R+IHG L+ + D K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
IE + +F +++ WNS++ H LF++MK G+ PN T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 376 CSHGGLIDKGQQ-YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES 434
G +D+G++ ++ + DY I P +H + MV L GRA +L+EAL I+ M I+
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 435 VWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLR 494
+W +FLTGCR+HGD ++A AA+ +F L ++ ++S K R
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 495 DRGVKKETGLSWIEEGNRVHTFAAGDRS 522
D +KK G SWIE N +HTF GD+S
Sbjct: 755 DNLLKKPLGQSWIEVRNLIHTFTTGDQS 782
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 171 IKACAILGRCDIGKSIHA-FVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN 229
+++C G +G+ +HA F + T + DVFV + + MY KCG I +ARKVFD M ERN
Sbjct: 88 LESCIDSGSIHLGRILHARFGLFT--EPDVFVETKLLSMYAKCGCIADARKVFDSMRERN 145
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
+ +WS MI AY+ KLF+ + + + +DF F +++ C N +E G+ IH
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
+ +K KCG ++ A++ F R++ WNS+L+A Q+ EE
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVD 409
+L M+ G+ P +T+ L+ + G D M+ +GI + M+
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 410 LLGRAGKLQEALDIIKAM 427
L G +ALD+ + M
Sbjct: 326 GLIHNGMRYQALDMFRKM 343
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 155/344 (45%), Gaps = 32/344 (9%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID 158
V L++ Y+K + + F+ +E++ TWS++I + ++ + FR M+ D
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
+ PDD +FP ++ CA G + GK IH+ V+K G + V +S + +Y KCGE+ A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 219 RKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNS 278
K F M ER+V++W+ ++ AY G+ E A++L KE E +S T++ +I
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG----- 290
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
G G C K + VF W +M+
Sbjct: 291 -----GYNQLGKC------------DAAMDLMQKMETFGITADVFT---------WTAMI 324
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIE 398
+ + +F +M G+ PN +T + + ACS +I++G + + G
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 399 PGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++VD+ + GKL++A + ++ + + W + +TG
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT-WNSMITG 427
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 31/317 (9%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
TW+++IS L N + A++ FR+M + + P+ SA+ AC+ L + G +H+
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENAL 250
VK GF DV VG+S VDMY KCG++++ARKVFD + ++V +W+ MI Y G A
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 251 KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
+LF +L N T++++I S ++ G + + L +
Sbjct: 439 ELFTRMQDANLRPNIITWNTMI-----SGYIKNGDEGEAMDLFQRME------------- 480
Query: 311 XKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
K G ++ RN WN ++ Q+ +E +LF +M+ PN +T L
Sbjct: 481 -KDGKVQ-----------RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE 430
LL AC++ ++ G + ++ + D ++G ++ + I M +
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 431 PTESVWGAFLTGCRLHG 447
+ W + + G LHG
Sbjct: 589 DIIT-WNSLIGGYVLHG 604
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 32/347 (9%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IH+ +IK + S VS+ ++ Y+K F+ + F +E+ W+SV+ + Q
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A+E ++M + I P + I LG+CD + + G DVF
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF- 318
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+W+ MI G AL +F++ L +
Sbjct: 319 ------------------------------TWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N T S + C ++ G ++H + +K + KCG +E A +
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ +++ WNSM+ Q + + ++LF RM++ +RPN IT+ ++ G
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 382 IDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
+ F M KD ++ + ++ + GK EAL++ + M
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 204/441 (46%), Gaps = 2/441 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSK-TQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH+ IK + V + L++ Y K + V + + F + +W+++I L
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ +M+ + P+ ++AC+ L IHA++++ D ++
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
VG+S VD Y ++ A V M R+ ++++ ++ + LG+ E AL + +
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ++ + I N LE G+ +H +K+ + KCG +E A
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
+VF E ++ WN ++ A + F+ M+ P+ +TFL LL ACS+G
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 381 LIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
L D G +YF +MK Y IEP +HY +V +LGRAG+L+EA +++ M ++P ++
Sbjct: 644 LTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTL 703
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVK 499
L CR G+ L A++ L + +LL++ ++ ++ +
Sbjct: 704 LRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLS 763
Query: 500 KETGLSWIEEGNRVHTFAAGD 520
K+ G S +E +VH+F + D
Sbjct: 764 KKLGKSTVEVQGKVHSFVSED 784
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 7/369 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G IH +IK L + ++L++ Y KT + + F+E ++ W+ +IS+ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
++ + A+ F +M+ P++ F S +++CA L G +H V+KTGF+ + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GSS D+Y KCG+ K A ++F + + +SW+ MI + + AL+ + E + +
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 262 SVNDFTFSSVIRVCGNSTL--LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N+FTF +++ G S+ LE G+ IH + + +E A
Sbjct: 222 PPNEFTF---VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
RV N + +++ +W S++ ++ +E F M+++G++PN T+ +L CS
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQ-EALDIIKAMPIEPTESVWGA 438
+D G+Q G E +VD+ + + EA + AM + P W
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTT 397
Query: 439 FLTGCRLHG 447
+ G HG
Sbjct: 398 LILGLVDHG 406
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 172 KACA-ILGRCD-----IGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM 225
K+C IL C+ IG IH V+K G ++ + ++ + +Y K I NARK+FDEM
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 226 PERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
R V +W+ MI A+ E +AL LF+E + N+FTFSSV+R C + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
++HG +KT ++ KCG + A +F+ + W M+ +
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
E + + M G+ PN TF+ LL A S GL + G+ + GI
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKT 263
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++VD + K+++A+ ++ + E +W + ++G
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSG 299
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 182/371 (49%), Gaps = 41/371 (11%)
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDE----------------------------- 224
G +VFVGS+ ++ Y K + +AR+ FD+
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 225 --MPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV-NDFTFSSVIRVCGNSTLL 281
MPER+VV+W+ +I ++ G +E A+ F + L E + + N+ TF I N
Sbjct: 62 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 121
Query: 282 ELGRQIHGLCLK-TSYDXXXXXXXXXXXXXXKCGVIEAASRVFN--EAPIRNLGMWNSML 338
G+ IH +K KCG +E + FN E RN+ WNSM+
Sbjct: 122 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 181
Query: 339 IACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG-LMKDYG 396
A + EE +F++M K+ +RPN +T L +L+AC+H GLI +G YF + DY
Sbjct: 182 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 241
Query: 397 IEPGA---QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAA 453
+P +HYA MVD+L R+G+ +EA ++IK+MP++P W A L GC++H + LA
Sbjct: 242 -DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAK 300
Query: 454 FAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRV 513
AA +I EL V+LSN + +++ G+K+ TG SWIE +++
Sbjct: 301 LAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQI 360
Query: 514 HTFAAGDRSHE 524
F D+++E
Sbjct: 361 RVFVNADKNNE 371
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 9/253 (3%)
Query: 103 HLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIR- 161
+LI+ Y K +L F E+S TW++VI +Q A+ F M+ + +
Sbjct: 43 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 102
Query: 162 PDDHIFPSAIKACAILGRCDIGKSIHAFVVK-TGFDVDVFVGSSTVDMYGKCGEIKNARK 220
P++ FP AI A + + GKSIHA +K G +VFV +S + Y KCG ++++
Sbjct: 103 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 162
Query: 221 VFDEMPE--RNVVSWSGMICAYALLGEDENALKLFKEALLE-DLSVNDFTFSSVIRVCGN 277
F+++ E RN+VSW+ MI YA G E A+ +F++ + + +L N+ T V+ C +
Sbjct: 163 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 222
Query: 278 STLLELGRQIHGLCLKTSYD---XXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGM 333
+ L++ G + D + G + A + P+ +G
Sbjct: 223 AGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 282
Query: 334 WNSMLIACAQHAH 346
W ++L C H++
Sbjct: 283 WKALLGGCQIHSN 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 82 GQQIHAHIIKSSLQSIPL-VSHHLINFYSKTQLPVFSLQAFE--EAQEKSATTWSSVISS 138
G+ IHA IK + + V + LI+FYSK SL AF E ++++ +W+S+I
Sbjct: 124 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 183
Query: 139 LAQNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIG-----KSIHAFVVK 192
A N A+ F +M+ D N+RP++ + AC G G K+++ +
Sbjct: 184 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDP 243
Query: 193 TGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP 226
+++ + + VDM + G K A ++ MP
Sbjct: 244 NLLELEHY--ACMVDMLSRSGRFKEAEELIKSMP 275
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 200/389 (51%), Gaps = 9/389 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G QIH + K + +V L++ Y++ + F+ +E+ +W+++I
Sbjct: 131 EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT 190
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N + F+ M+ + +PD F S ++A ++ +I +H +K GF
Sbjct: 191 ANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSA 250
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE-DENALKLFKEALLE 259
+ S V+ Y KCG + NA K+ + +R+++S + +I ++ +A +FK+ +
Sbjct: 251 LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM 310
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS---YDXXXXXXXXXXXXXXKCGVI 316
+++ SS++++C + +GRQIHG LK+S +D K G I
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYA--KSGEI 368
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
E A F E +++ W S++ +H + E+ L++RM++ ++PN +TFL LL AC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 377 SHGGLIDKGQQ-YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP--IEPTE 433
SH G + G + Y ++ +GIE +H + ++D+L R+G L+EA +I++ + +
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 434 SVWGAFLTGCRLHGDAELAAFAADRIFEL 462
S WGAFL CR HG+ +L+ AA ++ +
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSM 517
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 175/377 (46%), Gaps = 3/377 (0%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
IH + I + S + LI+ Y K + + F+ ++ +W+++IS ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
A+ F++M ++++ + + S +K+C LG G IH V K ++ V S+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
+ +Y +CG+++ AR FD M ER++VSW+ MI Y + + LF+ L E +
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
FTF S++R LE+ ++HGL +K + KCG + A ++
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 325 EAPIRNLGMWNSMLIACAQHAH-TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
R+L +++ +Q + T + F +F M + + + + +L C+ +
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVT 333
Query: 384 KGQQYFGL-MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
G+Q G +K I +++D+ ++G++++A+ + M + S W + + G
Sbjct: 334 IGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS-WTSLIAG 392
Query: 443 CRLHGDAELAAFAADRI 459
HG+ E A +R+
Sbjct: 393 YGRHGNFEKAIDLYNRM 409
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 199/383 (51%), Gaps = 4/383 (1%)
Query: 82 GQQIHAHIIKSSLQSIPLVS-HHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH + I S + LV + +++ Y + + ++L F +++ +W+ +I S +
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ +A++ F M I+PD++ + C+ L GK A +K GF +
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
V + +DM+ KC + ++ K+F E+ + + V + MI +Y+ E+AL+LF A+ +
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ + FTFSSV+ N+ +L+ G +H L +K +D K G ++ A
Sbjct: 332 VRPDKFTFSSVLSSM-NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR-MKNVGMRPNFITFLCLLYACSHG 379
VF + ++L WN++++ A+++ E +F++ + N ++P+ +T + +L AC +
Sbjct: 391 GVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYA 450
Query: 380 GLIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G +++G Q F M K +G+ PG +HYA +++LL R G + EA DI +P EP+ +W
Sbjct: 451 GFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEP 510
Query: 439 FLTGCRLHGDAELAAFAADRIFE 461
L GD LA A + E
Sbjct: 511 ILCASLDLGDTRLAETVAKTMLE 533
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 139/310 (44%), Gaps = 9/310 (2%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFP--SAIKAC 174
+L F+E E+ +W+++IS L I F M IRP + F +++ C
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC 148
Query: 175 AILGRCDIGKSIHAFVVKTGFD-VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSW 233
G+ IH + +G ++ V +S +DMY + G A VF M +R+VVSW
Sbjct: 149 V-----RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 234 SGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK 293
+ +I + + G E AL F ++ +++T S V+ +C + L G+Q LC+K
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 294 TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKL 353
+ KC ++ + ++F E + + NSM+ + + H E+ +L
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRL 323
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
F +RP+ TF +L + + ++D G L+ G + +++++ +
Sbjct: 324 FILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 414 AGKLQEALDI 423
G + A+ +
Sbjct: 383 TGSVDLAMGV 392
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
K G + NA +FDEMPER+VVSW+ MI G E +++F + ++ +FTFS
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 271 VIRVCGNSTLLELGRQIHG--LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPI 328
+ + T + G QIHG +C S + GV + A VF
Sbjct: 142 LASLV---TCVRHGEQIHGNAICSGVS-RYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 329 RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQY 388
R++ WN ++++C+ + E F M+ + ++P+ T ++ CS + KG+Q
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 389 FGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
L G + +D+ + +L +++ + + +
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+Q A IK S +V I+ +SK S++ F E ++ + +S+I S +
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ A+ F + ++RPD F S + + + D G +H+ V+K GFD+D
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTA 371
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL-E 259
V +S ++MY K G + A VF + ++++ W+ +I A +L +F + L+ +
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQI 287
L + T ++ C + + G QI
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQI 459
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 179/355 (50%), Gaps = 34/355 (9%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
+W+++I+ AQN A++ M + ++ D+H F + + + L IGK +HA V
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIK-------------------------------NAR 219
+K G + FV S VD+Y KCG +K A+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 220 KVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVND-FTFSSVIRVCGNS 278
++FD + E+N+V W+ M Y L + ++ L+L + + + + D SV+ C
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 279 TLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSML 338
+E G++IHG L+T KCG +E A R+F+ + R+ M+N+M+
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMI 466
Query: 339 IACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GLMKDYGI 397
CA H H + F+ F+ M G +P+ ITF+ LL AC H GL+ +G++YF +++ Y I
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 398 EPGAQHYATMVDLLGRAGKLQEALDIIKAMP-IEPTESVWGAFLTGCRLHGDAEL 451
P HY M+DL G+A +L +A+++++ + +E + GAFL C + + EL
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTEL 581
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 173/464 (37%), Gaps = 103/464 (22%)
Query: 86 HAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS------- 138
H IKS + S+ L+N YSK+ L + F+E E++ +W++VI++
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 139 ----------------LAQNEL----------PSLAIEYFRQMI---IDNIRPDDHIFPS 169
+ N L S AIE F +M D+I DD +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKC----------------- 212
+K A L G+ +H +VKTG D F SS + MY KC
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 213 ----------------GEIKNARKVFDEMPERN-VVSWSGMICAYALLGEDENALKLFKE 255
G+I A VF PE N +SW+ +I YA G +E ALK+
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 256 ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
L ++ +F +V+ V + L++G+++H LK KCG
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 316 IE-------------------------------AASRVFNEAPIRNLGMWNSMLIACAQH 344
++ A R+F+ +NL +W +M +
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 345 AHTEEVFKLFDR-MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQH 403
+ V +L + N P+ + + +L ACS ++ G++ G GI +
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
VD+ + G ++ A I + E ++ A + GC HG
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 82 GQQIHAHIIKSSLQSIPLVSH------------------HLI----NFYSKTQLPV-FSL 118
G+++HA ++K+ S VS HL+ N YS + + V +S
Sbjct: 279 GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSS 338
Query: 119 QA--------FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIR-PDDHIFPS 169
Q F+ EK+ W+++ P +E R I + PD + S
Sbjct: 339 QGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVS 398
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN 229
+ AC++ + GK IH ++TG +D + ++ VDMY KCG ++ A ++FD ER+
Sbjct: 399 VLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERD 458
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
V ++ MI A G + + + F++ ++ TF +++ C + L+ G +
Sbjct: 459 TVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 209/432 (48%), Gaps = 9/432 (2%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G Q+H IK+ + LVS+ + YS + + + FE +EK TW+++ISS Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+L A+ +++M I ++PD+ F S + L D+ + + A ++K G + +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQACIIKFGLSSKIEI 423
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ + Y K G+I+ A +F+ +N++SW+ +I + G L+ F L ++
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 262 SV--NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ + +T S+++ +C +++ L LG Q H L+ +CG I+ +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSH 378
VFN+ +++ WNS++ A ++H E + M++ G + P+ TF +L ACSH
Sbjct: 544 LEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Query: 379 GGLIDKGQQYFGLMKDY-GIEPGAQHYATMVDLLGRAGKLQEALDIIK--AMPIEPTESV 435
GL+++G + F M ++ G+ H++ +VDLLGRAG L EA ++K I V
Sbjct: 604 AGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDV 663
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
W A + C HGD +L A + E + V LSN + +
Sbjct: 664 WWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINM 723
Query: 496 RGVKKETGLSWI 507
G K+ G SW+
Sbjct: 724 IGAMKQRGCSWM 735
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 12/375 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQE--KSATTWSSVISSL 139
G+Q+H+ +IK+ V + LI Y Q+ V + FEE + T++ VI L
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
A + ++ FR+M+ ++RP D F S + +C+ +G +H +KTG++
Sbjct: 268 AGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYT 323
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
V ++T+ MY + A KVF+ + E+++V+W+ MI +Y ++A+ ++K +
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ ++FTF S++ + +LE+ + +K K G IE A
Sbjct: 384 GVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLLYACS 377
+F + +NL WN+++ + E + F + V + P+ T LL C
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
+ G Q + +G ++++ + G +Q +L++ M + S W
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS-WN 559
Query: 438 AFLTGCRLHGDAELA 452
+ ++ HG+ E A
Sbjct: 560 SLISAYSRHGEGENA 574
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 173/395 (43%), Gaps = 43/395 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSK-----------------------TQLPV--- 115
G Q+H + I+S L VS+ L++ Y + T L
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 116 -----FSLQAFEEAQEKS-ATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
++ + F++ E+ W+++I+ ++ ++E FR+M +R D F +
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDE--MPE 227
+ C G D GK +H+ V+K GF + V ++ + MY C + +A VF+E +
Sbjct: 196 ILSMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 228 RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
R+ V+++ +I A DE+ L +F++ L L D TF SV+ C + +G Q+
Sbjct: 255 RDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQV 310
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
HGL +KT Y+ AA +VF ++L WN+M+ + Q
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
+ ++ RM +G++P+ TF LL +++ Q + +G+ + +
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ---ACIIKFGLSSKIEISNAL 427
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
+ + G++++A D++ + W A ++G
Sbjct: 428 ISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 143/347 (41%), Gaps = 67/347 (19%)
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
+RPD + AI L G +H + +++G V ++ + +Y + G + +
Sbjct: 52 TLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASL 111
Query: 219 RKVFDEMPERNVVSWSGMICAYALLGEDENALKLF-------------------KEALLE 259
+K FDE+ E +V SW+ ++ A LG+ E A ++F KE+
Sbjct: 112 KKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYH 171
Query: 260 DLSV-------------NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
+ SV + F F++++ +C + L+ G+Q+H L +K +
Sbjct: 172 ETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNAL 230
Query: 307 XXXXXKCGVIEAASRVFNEA--PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP 364
C V+ A VF E +R+ +N ++ A E + +F +M +RP
Sbjct: 231 ITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRP 289
Query: 365 NFITFLCLLYACS--------HGGLIDKGQQYFGLMKDYGI-------EPGAQH------ 403
+TF+ ++ +CS HG I G + + L+ + + + GA H
Sbjct: 290 TDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL 349
Query: 404 -------YATMVDLLGRAGKLQEALDIIKAMPI---EPTESVWGAFL 440
+ TM+ +A + A+ + K M I +P E +G+ L
Sbjct: 350 EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL 396
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 200/409 (48%), Gaps = 38/409 (9%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISS-LAQNELPSLAIEYFRQMIIDNIRP 162
++N YSK L + + F++ EK +W ++I L +N+L A+ Y+ +M+ ++P
Sbjct: 499 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE-ALVYYTEMLRCGMKP 557
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYG------------ 210
+ + + A A G +H +VK GFD F+ ++ + Y
Sbjct: 558 SEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF 617
Query: 211 -------------------KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK 251
K G ++ AR+VFD+ ++++ SW+ MI YA + AL
Sbjct: 618 EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALH 677
Query: 252 LFKEALLED-LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXX 310
LF+E + + + T SV + LE G++ H ++
Sbjct: 678 LFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMY 737
Query: 311 XKCGVIEAASRVFNEA---PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
KCG IE A +F++ + WN+++ A H H + L+ ++++ ++PN I
Sbjct: 738 AKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSI 797
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKA 426
TF+ +L AC H GL++ G+ YF MK D+GIEP +HY MVDLLG+AG+L+EA ++IK
Sbjct: 798 TFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKK 857
Query: 427 MPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSN 475
MP++ +WG L+ R HG+ E+A AA + + G V+LSN
Sbjct: 858 MPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSN 906
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 196/468 (41%), Gaps = 98/468 (20%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQL-----PVF-------------------- 116
G+QIH ++KS L S + + ++N Y+K +L VF
Sbjct: 314 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 373
Query: 117 ------SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSA 170
+L+ F+ E+S +++++I AQN S A+E FR+M I ++ +
Sbjct: 374 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 433
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV 230
I AC+ LG + + + +K + VFV ++ + MY C +K+ARK+FDEMPERN+
Sbjct: 434 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 493
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLED-----------LSVNDFT-----FSSVIRV 274
V+W+ M+ Y+ G E A +LF + +D L N ++ ++R
Sbjct: 494 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR- 552
Query: 275 CG----NSTLLEL------------GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
CG +++L G Q+HG +K +D I+
Sbjct: 553 CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL 612
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR---------------------- 356
A + F + ++ N+++ ++ E+ ++FD+
Sbjct: 613 ALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSP 672
Query: 357 ----------MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
+ + ++P+ IT + + A S G +++G++ + I P A
Sbjct: 673 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA 732
Query: 407 MVDLLGRAGKLQEALDIIKAMP--IEPTESVWGAFLTGCRLHGDAELA 452
++D+ + G ++ AL+I T S W A + G HG A+LA
Sbjct: 733 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 780
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 156/370 (42%), Gaps = 61/370 (16%)
Query: 98 PLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMII 157
P+ ++ F SK P+ L+ + + + W+ V S + P LA Y +II
Sbjct: 212 PVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKWNLVTSEFVGSVYPVLAT-YLLPLII 270
Query: 158 DNIRP--------------------DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+RP + SA+ +CA G+ IH V+K+G D
Sbjct: 271 --LRPARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDS 328
Query: 198 DVFVGSSTVDMYGKC--------------------------GEIKNAR-----KVFDEMP 226
+ ++ +S ++MY KC G +++ R K+FD MP
Sbjct: 329 NGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMP 388
Query: 227 ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQ 286
ER+ VS++ +I YA + A++LF+E + +N+ T ++VI C + + R
Sbjct: 389 ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRM 448
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
+ L +K + C ++ A ++F+E P RNL WN ML ++
Sbjct: 449 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 508
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
E+ +LFD++ + +++ ++ C +D+ Y+ M G++P
Sbjct: 509 IEQAEELFDQIT----EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE---VM 561
Query: 407 MVDLLGRAGK 416
MVDLL + +
Sbjct: 562 MVDLLSASAR 571
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 168/337 (49%), Gaps = 5/337 (1%)
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDE 247
K G D +S Y G+ + A V +M E+ NVVSW+ + + G
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
NALK+F + E + N T S+++++ G +LL G+++HG CL+ +
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 170
Query: 308 XXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
K G +++A +F ++L WN ML+ A EE F M GM P+ I
Sbjct: 171 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 230
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKA 426
TF +L C + GL+ +G +YF LM+ YGI P +H + MVDLLGR+G L EA D I+
Sbjct: 231 TFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQT 290
Query: 427 MPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXX 486
M ++P ++WGAFL+ C++H D ELA A R+ L +S +++ N
Sbjct: 291 MSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDV 350
Query: 487 XXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
++R+ V+ + SWI+ VH F A ++H
Sbjct: 351 ERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 387
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 91 KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELPS 146
K ++ + + L + Y+ P +L + +EK + +W+++ S ++N
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 147 LAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTV 206
A++ F +M + + P+ + +K L GK +H F ++ D +V ++ V
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 170
Query: 207 DMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDF 266
DMYGK G++++A ++F + +++ SW+ M+ YA+ G E + F L + +
Sbjct: 171 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 230
Query: 267 TFSSVIRVCGNSTLLELGRQIHGL 290
TF+SV+ VC NS L++ G + L
Sbjct: 231 TFTSVLSVCKNSGLVQEGWKYFDL 254
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 2/366 (0%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H +++K + ++ +V L+ FY++ +L+AF+ +EK +W++VIS+ ++
Sbjct: 203 GRQVHGNMVKVGVGNL-IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
AI F M+ P++ S +KAC+ G+ +H+ VVK DVFV
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+S +DMY KCGEI + RKVFD M RN V+W+ +I A+A G E A+ LF+ L
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N+ T S++R CG+ L LG+++H +K S + KCG A
Sbjct: 382 IANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
V + P R++ W +M+ C+ H E M G+ PN T+ L AC++
Sbjct: 442 VLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSES 501
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ G+ + K + ++ + + G + EA + +MP E W A +
Sbjct: 502 LLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIM 560
Query: 442 GCRLHG 447
G +G
Sbjct: 561 GYARNG 566
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 153/295 (51%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+H+ ++K +++ V L++ Y+K + F+ ++ TW+S+I++ A+
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
AI FR M ++ ++ S ++AC +G +GK +HA ++K + +V++
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYI 422
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS+ V +Y KCGE ++A V ++P R+VVSW+ MI + LG + AL KE + E +
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N FT+SS ++ C NS L +GR IH + K KCG + A R
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
VF+ P +NL W +M++ A++ E KL RM+ G + F +L C
Sbjct: 543 VFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 171/362 (47%), Gaps = 3/362 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
++IHA +K + ++LI+ + V++ + F+ EK+ TW+++I +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 143 ELPSLAIEYFRQMIIDNIR-PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L A F + IR ++ +F + C+ ++G+ +H +VK G ++ V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIV 220
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
SS V Y +CGE+ +A + FD M E++V+SW+ +I A + G A+ +F L
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
N+FT S+++ C L GRQ+H L +K KCG I +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ RN W S++ A A+ EE LF MK + N +T + +L AC G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ G++ + IE +T+V L + G+ ++A ++++ +P S W A ++
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMIS 459
Query: 442 GC 443
GC
Sbjct: 460 GC 461
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++HA IIK+S++ + L+ Y K + ++ + +W+++IS +
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
S A+++ ++MI + + P+ + SA+KACA IG+SIH+ K +VFV
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
GS+ + MY KCG + A +VFD MPE+N+VSW MI YA G ALKL E
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 262 SVNDFTFSSVIRVCGNSTLLE 282
V+D+ F++++ CG+ L E
Sbjct: 584 EVDDYIFATILSTCGDIELDE 604
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 4/283 (1%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALL 243
K IHA +K D ++ G++ + + G++ ARKVFD MPE+N V+W+ MI Y
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 244 GEDENALKLFKEALLEDLS-VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
G ++ A LF++ + + N+ F ++ +C ELGRQ+HG +K
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIV 220
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
+CG + +A R F+ +++ W +++ AC++ H + +F M N
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
PN T +L ACS + G+Q L+ I+ +++D+ + G++ +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 423 IIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHV 465
+ M T + W + + G E A + RI + H+
Sbjct: 341 VFDGMSNRNTVT-WTSIIAAHAREGFGE-EAISLFRIMKRRHL 381
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Query: 277 NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNS 336
+S + L ++IH + LK D + G + A +VF+ P +N W +
Sbjct: 94 SSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTA 153
Query: 337 MLIACAQHAHTEEVFKLFDRMKNVGMR-PNFITFLCLLYACSHGGLIDKGQQYFGLMKDY 395
M+ ++ +E F LF+ G+R N F+CLL CS + G+Q G M
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV 213
Query: 396 GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
G+ +++V + G+L AL M + S W A ++ C G
Sbjct: 214 GVGNLIVE-SSLVYFYAQCGELTSALRAFDMMEEKDVIS-WTAVISACSRKG 263
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 187/383 (48%), Gaps = 34/383 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+QIH IIK +L + L+ LI+ S ++ F + Q S TW+ +I SL+ N
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 143 ELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
P A+ F M+I + + D FP IKAC +G +H +K GF DVF
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 202 GSSTVDMYGKCGEIKNARKVFD-------------------------------EMPERNV 230
++ +D+Y KCG+ + RKVFD +MP RNV
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
VSW+ MI AY + A +LF+ ++D+ N+FT ++++ L +GR +H
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEV 350
K + KCG ++ A +VF+ ++L WNSM+ + H EE
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 351 FKLF-DRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM-KDYGIEPGAQHYATMV 408
LF + + + P+ ITF+ +L AC++ G + G +YF M + YGI P +H A M+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 409 DLLGRAGKLQEALDIIKAMPIEP 431
LL +A ++++A +++++M +P
Sbjct: 397 QLLEQALEVEKASNLVESMDSDP 419
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 188/388 (48%), Gaps = 6/388 (1%)
Query: 124 AQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN-IRPDDHIFPSAIKACAILGRCDI 182
++ + T+W+SVIS A + ++ F+ M + IR D I A LG
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 183 GKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL 242
G+ H +K+ ++D + ++ + MYG+C +I++A KVF + + N+ SW+ +I A +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 243 LGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
+LF+ LE N+ TF ++ G Q H ++ +
Sbjct: 660 NKAGREVFQLFRNLKLEP---NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK-NVG 361
CG++E +VF + + ++ WNS++ A H E+ +LF + N
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEA 420
M PN +F+ LL ACSH G ID+G Y+ M++ +G++P +H +VD+LGRAGKL+EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 421 LDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXX 480
+ I + VWGA L+ C HGD +L A+ +FE+ ++ + L+N
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 481 XXXXXXXXXXKMLRDRGVKKETGLSWIE 508
KM+ D +KK G S I+
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 28/369 (7%)
Query: 82 GQQIHAHIIKS--SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
G+ +H +IKS S ++ V + +I+ YSK + FEE + + +++++
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 140 AQNELPSLAIEYFRQM-IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
A N + A QM +D I+PD S C L G+++H + V+
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 199 VF-VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
V +S +DMYGKCG A +F R++VSW+ MI A++ G A LFKE +
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE-V 486
Query: 258 LEDLSVNDFTFSSVIRV---CGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
+ + S + F+ S+V+ + C +S L G+ +H K
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG------------------D 528
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLL 373
+ A R+ + R+L WNS++ CA H E + F M G +R + IT L +
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 374 YACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
A + GL+ +G+ + GL E Q T++ + GR ++ A+ + + +P
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS-DPNL 647
Query: 434 SVWGAFLTG 442
W ++
Sbjct: 648 CSWNCVISA 656
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 4/342 (1%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +H +K L S L+ FY +T V S F+E +EK W+S+I++L QN
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
A+ F +MI D A A + L +H ++TG D +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
++ +++Y K + +A VF M R++VSW+ ++ G +L+ FK
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY--DXXXXXXXXXXXXXXKCGVIEAAS 320
+ TFS VI C + L LG +HGL +K+ Y + KCG EAA
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHG 379
VF E R++ N++L A + EE F + ++M++V ++P+ T + + C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 380 GLIDKGQQYFGLMKDYGIEPGA-QHYATMVDLLGRAGKLQEA 420
+G+ G ++ A + +++D+ G+ G +A
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ H IKS + + + LI Y + + +++ F + + +W+ VIS+L+
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
QN+ + FR + + P++ F + A LG G H +++ GF + F
Sbjct: 659 QNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF 715
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE-ALLE 259
V ++ VDMY CG ++ KVF ++ +W+ +I A+ G E A++LFKE +
Sbjct: 716 VSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNS 775
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELG 284
++ N +F S++ C +S ++ G
Sbjct: 776 EMEPNKSSFISLLSACSHSGFIDEG 800
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 194/432 (44%), Gaps = 40/432 (9%)
Query: 116 FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIE-YFRQMIIDNIRPDDHIFPSAIKAC 174
++ F S ++++I +E SL+ + +F +M ++ PD H FP KAC
Sbjct: 66 YATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKAC 125
Query: 175 AILGRCDIG--KSIHAFVVKTGFDVDVFVGSSTVDMYG---------------------- 210
A D+ K++H ++ G D+F ++ + +Y
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 211 ---------KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
K EI AR++FD MP R++VSW+ +I YA + A+KLF E + L
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
++ S + C S + G+ IH + KCG I+ A
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
+F + L WN+M+ A H + E F +M + G++P+ +TF+ +L CSH GL
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 382 IDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES----VW 436
+D+ + F M+ Y + +HY M DLLGRAG ++EA ++I+ MP + W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 437 GAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKML-RD 495
L GCR+HG+ E+A AA+R+ L G+ ++ +++ RD
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 496 RGVKKETGLSWI 507
+ VKK G S +
Sbjct: 486 KKVKKNVGFSKV 497
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 8/262 (3%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
LI+ K + V + + F+ + +W+S+IS AQ AI+ F +M+ ++PD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 164 DHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+ S + ACA G GK+IH + + +D F+ + VD Y KCG I A ++F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
++ + +W+ MI A+ G E + F++ + + + TF SV+ C +S L++
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 284 GRQIHGLCLKTSYDXXXXXXXX--XXXXXXKCGVIEAASRVFNEAPI-----RNLGMWNS 336
R + +++ YD + G+IE A+ + + P L W+
Sbjct: 369 ARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSG 427
Query: 337 MLIACAQHAHTEEVFKLFDRMK 358
+L C H + E K +R+K
Sbjct: 428 LLGGCRIHGNIEIAEKAANRVK 449
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 94/178 (52%), Gaps = 8/178 (4%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
KG+ IH + + L ++ L++FY+K +++ FE +K+ TW+++I+ LA
Sbjct: 267 KGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLA 326
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ L ++YFR+M+ I+PD F S + C+ G D +++ +++ +DV+
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMRSLYDVNRE 385
Query: 201 VG--SSTVDMYGKCGEIKNARKVFDEMPE-----RNVVSWSGMICAYALLGEDENALK 251
+ D+ G+ G I+ A ++ ++MP+ +++WSG++ + G E A K
Sbjct: 386 MKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 206/442 (46%), Gaps = 44/442 (9%)
Query: 103 HLIN--FYSKTQLP-----VFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQM 155
HL+ YS Q+ + + A ++ K+ ++++I S ++ F M
Sbjct: 18 HLLQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHM 77
Query: 156 IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEI 215
+ +++P++ FPS IKA G ++H +K GF D FV +S V YG+ G++
Sbjct: 78 LASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDL 137
Query: 216 KNARKVFDE-------------------------------MPERNVVSWSGMICAYALLG 244
+++RK+FD+ MP +VVSW+ +I ++ G
Sbjct: 138 ESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKG 197
Query: 245 EDENALKLFKEALLEDLSV---NDFTFSSVIRVCGN--STLLELGRQIHGLCLKTSYDXX 299
AL +F E + + +V N+ TF SV+ C N + LG+QIHG +
Sbjct: 198 LHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILT 257
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
K G +E A +F++ + + WN+++ A A + ++ ++F+ MK+
Sbjct: 258 TTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKS 317
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQ 418
+ PN IT L +L AC+ L+D G Q F + +Y I P ++HY +VDL+GRAG L
Sbjct: 318 SYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLV 377
Query: 419 EALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXX 478
+A + I+++P EP SV GA L C++H + EL ++ L G V LS
Sbjct: 378 DAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNA 437
Query: 479 XXXXXXXXXXXXKMLRDRGVKK 500
K + + G++K
Sbjct: 438 LDSNWSEAEKMRKAMIEAGIRK 459
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+QIH +++ + + L++ Y K +L F++ ++K W+++IS+LA
Sbjct: 242 GKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS 301
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N P A+E F M + P+ + + ACA D+G + + + + +
Sbjct: 302 NGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS---EYKIIP 358
Query: 202 GSS----TVDMYGKCGEIKNARKVFDEMP 226
S VD+ G+ G + +A +P
Sbjct: 359 TSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 216/434 (49%), Gaps = 17/434 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+Q+HA +IK ++ + LI+ YSK V S++ FE +EK +W++++S +
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N A+ F M + + + S +K CA L GK +HA VV TG D+ V +
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVL 221
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA--LLE 259
G++ + Y G I A KV++ + NV + M+ + + G N + +KEA L+
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSL-ISGCIRN--RNYKEAFLLMS 275
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
N SS + C +++ L +G+QIH + L+ + KCG I A
Sbjct: 276 RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQA 335
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNVGMRPNFITFLCLLYACS 377
+F P +++ W SM+ A A + + ++F M + G+ PN +TFL ++ AC+
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 378 HGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTES-- 434
H GL+ +G++ FG+MK+ Y + PG +HY +D+L +AG+ +E +++ M +S
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Query: 435 --VWGAFLTGCRLHGDAELAAFAADRIF-ELGHVSSGMNVLLSNXXXXXXXXXXXXXXXK 491
+W A L+ C L+ D + A R+ E G ++ + VL+SN
Sbjct: 456 CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRG 515
Query: 492 MLRDRGVKKETGLS 505
L+++G+ K G S
Sbjct: 516 KLKNKGLVKTAGHS 529
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD--DHIFPSAIKACAILG 178
F+E ++ ++ +S +SS ++ P+ + F Q I PD H F + AC++L
Sbjct: 41 FDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ--IHRASPDLSSHTFTPVLGACSLLS 98
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMIC 238
+ G+ +HA ++K G + ++ +DMY K G + ++ +VF+ + E+++VSW+ ++
Sbjct: 99 YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
+ G+ + AL +F E + +++FT SSV++ C + +L+ G+Q+H + + T D
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD- 217
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRM 357
G+I A +V+N + + M NS++ C ++ + +E F L R
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR- 276
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
RPN L CS + G+Q + G ++ ++D+ G+ G++
Sbjct: 277 ----QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQI 332
Query: 418 QEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+A I +A+P + S W + + ++GD
Sbjct: 333 VQARTIFRAIPSKSVVS-WTSMIDAYAVNGDG 363
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 116/219 (52%), Gaps = 10/219 (4%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQ-EKSATTWSSVISSL 139
+G+Q+HA ++ + + + ++ +I+FYS L +++ + +S+IS
Sbjct: 203 QGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+N A +++ RP+ + S++ C+ IGK IH ++ GF D
Sbjct: 262 IRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS 316
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
+ + +DMYGKCG+I AR +F +P ++VVSW+ MI AYA+ G+ AL++F+E E
Sbjct: 317 KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376
Query: 260 DLSV--NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
V N TF VI C ++ L++ G++ G+ +K Y
Sbjct: 377 GSGVLPNSVTFLVVISACAHAGLVKEGKECFGM-MKEKY 414
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 104/237 (43%), Gaps = 5/237 (2%)
Query: 211 KCGEIKN----ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDF 266
+C I+N A +FDE+P+R++ S + + ++ G + L LF + ++
Sbjct: 26 RCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH 85
Query: 267 TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA 326
TF+ V+ C + E GRQ+H L +K + K G + + RVF
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV 145
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
++L WN++L ++ +E +F M + + T ++ C+ ++ +G+
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
Q ++ G + A M+ G + EA+ + ++ + E + + ++GC
Sbjct: 206 QVHAMVVVTGRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 199/421 (47%), Gaps = 19/421 (4%)
Query: 104 LINFYSKTQLPVFSLQAFE--EAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIR 161
+I+ Y K L V + + F+ + K+ +W+S+IS AQ S ++ ++ D
Sbjct: 186 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT---SDGVDIASKLFADMPE 242
Query: 162 PDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV----DVFVGSSTVDMYGKCGEIKN 217
D + S I GR + K + FDV DV ++ +D Y K G + +
Sbjct: 243 KDLISWNSMIDGYVKHGRIEDAKGL--------FDVMPRRDVVTWATMIDGYAKLGFVHH 294
Query: 218 ARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED-LSVNDFTFSSVIRVCG 276
A+ +FD+MP R+VV+++ M+ Y AL++F + E L +D T V+
Sbjct: 295 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 354
Query: 277 NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNS 336
L +H ++ + KCG I+ A VF +++ WN+
Sbjct: 355 QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA 414
Query: 337 MLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMK-DY 395
M+ A H E F + +++ + ++P+ ITF+ +L ACSH GL+ +G F LM+ +
Sbjct: 415 MIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH 474
Query: 396 GIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFA 455
IEP QHY MVD+L R+G ++ A ++I+ MP+EP + +W FLT C H + E
Sbjct: 475 KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELV 534
Query: 456 ADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHT 515
A + + VLLSN M+++R ++K G SWIE RVH
Sbjct: 535 AKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHE 594
Query: 516 F 516
F
Sbjct: 595 F 595
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 174/410 (42%), Gaps = 43/410 (10%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV-----------FSLQAFEEAQEKSATT 131
QIH +IK+ + ++ ++ ++ ++ P + + +F + +
Sbjct: 22 NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFL 81
Query: 132 WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV 191
W++VI S + + P A+ M+ + + D +KAC+ LG G IH F+
Sbjct: 82 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 141
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK 251
KTG D+F+ + + +Y KCG + +R++FD MP+R+ VS++ MI Y G +A +
Sbjct: 142 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 201
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNST-----------------LLELGRQIHGLC--- 291
LF +E N +++S+I ++ L+ I G
Sbjct: 202 LFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 259
Query: 292 ----LKTSYDXX----XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
K +D K G + A +F++ P R++ +NSM+ Q
Sbjct: 260 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 319
Query: 344 HAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQ 402
+ + E ++F M K + P+ T + +L A + G + K + + G +
Sbjct: 320 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 379
Query: 403 HYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
++D+ + G +Q A+ + + + + + W A + G +HG E A
Sbjct: 380 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDH-WNAMIGGLAIHGLGESA 428
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 214/484 (44%), Gaps = 37/484 (7%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSK--------------------------TQLP 114
+G+++H I+ L V++ LI FYSK T
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 115 VF-----SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
F +++ F EK+ T++++++ +N A++ F M+ + D S
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTS 422
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER- 228
A+ AC ++ + + IH F +K G + + ++ +DM +C + +A ++FD+ P
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 229 -NVVSWSGMICAYALLGEDENALKLFKEALLED-LSVNDFTFSSVIRVCGNSTLLELGRQ 286
+ + + +I YA G + A+ LF L E L +++ + + ++ VCG E+G Q
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 287 IHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
IH LK Y KC + A ++FN ++ WNS++ +
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSH--GGLIDKGQQYFGLMKD-YGIEPGAQH 403
+E L+ RM ++P+ IT ++ A + + + F MK Y IEP +H
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELG 463
Y V +LG G L+EA D I +MP++P SV A L CR+H + +A A I
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTK 722
Query: 464 HVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSH 523
+ +L SN + +R+RG +K SWI N++H+F A D SH
Sbjct: 723 PETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSH 782
Query: 524 EKAK 527
+ K
Sbjct: 783 PQEK 786
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 167/384 (43%), Gaps = 42/384 (10%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+ +HA +K + L + LI+ Y K P ++ F + +++++IS ++
Sbjct: 100 KAVHASFLKLREEKTRL-GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 143 ELPSLAIE-YFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
L A++ +FR ++P+++ F + + AC + R +G IH +VK+GF VFV
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 202 GSSTVDMYGK--CGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEA-LL 258
+S + +Y K + K+FDE+P+R+V SW+ ++ + G+ A LF E +
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS----------------------- 295
E V+ FT S+++ C +S++L GR++HG ++
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 296 ----YDXXXXXXXXXXXXXXKC----GVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHT 347
Y+ G++++A +F +N +N+++ ++ H
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK---GQQYFGLMKDYGIEPGAQHY 404
+ KLF M G+ + + AC GL+ + +Q G +G
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQ 455
Query: 405 ATMVDLLGRAGKLQEALDIIKAMP 428
++D+ R ++ +A ++ P
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWP 479
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 34/280 (12%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFS--LQAFEEAQEKSATTWSSVISSL 139
G QIH I+KS + VS+ L++ Y K L+ F+E ++ +W++V+SSL
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 140 AQNELPSLAIEYFRQM-IIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
+ A + F +M ++ D + + +C G+ +H ++ G +
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY------------------ 240
+ V ++ + Y K ++K +++ M ++ V+++ MI AY
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 241 -------ALL------GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
AL+ G ALKLF + L + + DF+ +S + CG + ++ QI
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
HG C+K +C + A +F++ P
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
++ K++HA +K + +G++ + Y K G + A VF + VVS++ +I +
Sbjct: 97 EVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGF 155
Query: 241 ALLGEDENALKLF----KEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
+ L + ALK+F K L++ N++TF +++ C + LG QIHGL +K+ +
Sbjct: 156 SRLNLEIEALKVFFRMRKAGLVQP---NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF 212
Query: 297 DXXXXXXXXXXXXXXK--CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLF 354
K + ++F+E P R++ WN+++ + + + + F LF
Sbjct: 213 LNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLF 272
Query: 355 DRMKNV-GMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
M V G + T LL +C+ ++ +G++ G
Sbjct: 273 YEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 213/481 (44%), Gaps = 38/481 (7%)
Query: 82 GQQIHAHIIKSS-LQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G++IH++I++ S L V + LI+FY++ + AF K +W++++ + A
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF---DV 197
+ + ++ + I D S +K C + K +H + VK G +
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPER-NVVSWSGMICAYALLGEDENALKLFKEA 256
+ +G++ +D Y KCG ++ A K+F + ER +VS++ ++ Y G ++A LF E
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 257 LLEDLSV-------------------------------NDFTFSSVIRVCGNSTLLELGR 285
DL+ N T +++ VC L L R
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
Q HG ++ KCG ++ A VF R+L M+ +M+ A H
Sbjct: 589 QCHGYIIRGGLGDIRLKGTLLDVYA-KCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHY 404
+E ++ M ++P+ + +L AC H GLI G Q + ++ +G++P + Y
Sbjct: 648 RGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY 707
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGH 464
A VDL+ R G+L +A + MP+EP ++WG L C + +L A+ + +
Sbjct: 708 ACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES 767
Query: 465 VSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHE 524
+G +VL+SN +++ + +KK G SW+E + + F +GD SH
Sbjct: 768 DDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHP 827
Query: 525 K 525
+
Sbjct: 828 R 828
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 179/389 (46%), Gaps = 23/389 (5%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVF--SLQAFEEAQEKSATTWSSVISS 138
G+ +H++IIK+ L+ LV + L++ Y+K +F + AF+ +K +W+++I+
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGF-IFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGR---CDIGKSIHAFVV-KTG 194
++N + + A F M+ + P+ + + CA + + C G+ IH++VV ++
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
VFV +S V Y + G I+ A +F M +++VSW+ +I YA E A +LF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 255 EALLE-DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX-XXXXXXXXK 312
+ + D+S + T S++ VC T L G++IH L+ SY +
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
G AA F+ +++ WN++L A A + L + N + + +T L L
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 373 LYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA-------TMVDLLGRAGKLQEALDIIK 425
L C + I K ++ G Y ++ G H ++D + G ++ A I
Sbjct: 439 LKFCINVQGIGKVKEVHG----YSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFL 494
Query: 426 AMPIEPTESVWGAFLTG---CRLHGDAEL 451
+ T + + L+G H DA++
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQM 523
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 156/357 (43%), Gaps = 15/357 (4%)
Query: 38 PLNQPVFEQNYKPPQNLNQFSFEEKYRHICEXXXXXXXXXXXXKGQQIHAHIIKSSLQSI 97
PL Q F QN++ F +R + G+ +H + K +
Sbjct: 3 PLRQ--FVQNFRLLSG-----FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIAC 55
Query: 98 PLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQM-I 156
VS ++N Y+K + + F + W+ V++ L+ + + +F+ M
Sbjct: 56 SEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHF 114
Query: 157 IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEI- 215
D +P F + C LG GKS+H++++K G + D VG++ V MY K G I
Sbjct: 115 ADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIF 174
Query: 216 KNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
+A FD + +++VVSW+ +I ++ +A + F L E N T ++V+ VC
Sbjct: 175 PDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 276 GN---STLLELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNL 331
+ + GRQIH ++ S+ + G IE A+ +F ++L
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 332 GMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQ 387
WN ++ A + + F+LF + + G + P+ +T + +L C+ + G++
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 172/404 (42%), Gaps = 40/404 (9%)
Query: 82 GQQIHAHIIKSS-LQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+QIH+++++ S LQ+ V + L++FY + + F K +W+ VI+ A
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 141 QNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-D 198
N A + F ++ ++ PD S + CA L GK IH+++++ + + D
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
VG++ + Y + G+ A F M ++++SW+ ++ A+A + L L L
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY---DXXXXXXXXXXXXXXKCGV 315
E ++++ T S+++ C N + +++HG +K + KCG
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 316 IEAASRV--------------------------------FNEAPIRNLGMWNSMLIACAQ 343
+E A ++ F E +L W+ M+ A+
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 344 HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQH 403
E +F ++ GMRPN +T + LL C+ + +Q G + G+ +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRL 604
Query: 404 YATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHG 447
T++D+ + G L+ A + ++ ++ A + G +HG
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHG 647
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 195/392 (49%), Gaps = 15/392 (3%)
Query: 121 FEEAQEKSATTWSSVISS-LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGR 179
F E K+ +W+S+I + L ++ S +++ D ++ D I + + I G
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSA------RLLFDQMKDRDTISWNTM----IDGY 322
Query: 180 CDIGKSIHAFVVKTGF-DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMIC 238
+ + AF + + + D + V Y G ++ AR F++ PE++ VSW+ +I
Sbjct: 323 VHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
AY + + A+ LF +E + T +S++ L LG Q+H + +KT
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD 442
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRM 357
+CG I + R+F+E + R + WN+M+ A H + E LF M
Sbjct: 443 VPVHNALITMYS-RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM 501
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQ-QYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
K+ G+ P+ ITF+ +L AC+H GL+D+ + Q+ +M Y IEP +HY+++V++ G+
Sbjct: 502 KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQ 561
Query: 417 LQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNX 476
+EA+ II +MP EP ++VWGA L CR++ + LA AA+ + L SS VLL N
Sbjct: 562 FEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNM 621
Query: 477 XXXXXXXXXXXXXXKMLRDRGVKKETGLSWIE 508
+ + +KKE G SW++
Sbjct: 622 YADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 52/377 (13%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPD 163
+I+ Y+K + +L FE+ E++A +WS++I+ QN A+ FR+M + + P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL 201
Query: 164 DHIFPSAIK------ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN 217
+ IK A +LG+ + +V D+ V+ ++ + YG+ G+++
Sbjct: 202 CALVAGLIKNERLSEAAWVLGQ-------YGSLVSGREDL-VYAYNTLIVGYGQRGQVEA 253
Query: 218 ARKVFDEMPE---------------RNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
AR +FD++P+ +NVVSW+ MI AY +G+ +A LF + D
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI 313
Query: 263 VNDFTFSSVIRVCGNSTLLEL-----GRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+ + V L R H + S G +E
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS-------------GYASVGNVE 360
Query: 318 AASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
A F + P ++ WNS++ A ++ +E LF RM G +P+ T LL A +
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 378 HGGLID--KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
GL++ G Q ++ I P + ++ + R G++ E+ I M ++
Sbjct: 421 --GLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT 477
Query: 436 WGAFLTGCRLHGDAELA 452
W A + G HG+A A
Sbjct: 478 WNAMIGGYAFHGNASEA 494
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 40/263 (15%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
FE+ + ++ TW+++IS + + A + F M ++ + + + I
Sbjct: 63 FEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLE 122
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
+ K + D F ++ + Y K I A +F++MPERN VSWS MI +
Sbjct: 123 EARKLFDEMPSR-----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGF 177
Query: 241 ALLGEDENALKLFKEALLEDLS---------VNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
GE ++A+ LF++ ++D S + + S V G L GR+
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE----D 233
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP---------------IRNLGMWNS 336
L +Y+ G +EAA +F++ P +N+ WNS
Sbjct: 234 LVYAYNTLIVGYGQR-------GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 337 MLIACAQHAHTEEVFKLFDRMKN 359
M+ A + LFD+MK+
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKD 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 27/228 (11%)
Query: 211 KCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
+ G I AR +F+++ RN V+W+ MI Y E A KLF D+ + S
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 271 VIRVCGNSTLLELGRQIHG-LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR 329
+ CG LE R++ + + S+ K I A +F + P R
Sbjct: 112 YVS-CGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 330 NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ--- 386
N W++M+ Q+ + LF +M P LC L A GLI +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP-----LCALVA----GLIKNERLSE 216
Query: 387 ------QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP 428
QY L+ G E Y T++ G+ G+++ A + +P
Sbjct: 217 AAWVLGQYGSLVS--GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 182/397 (45%), Gaps = 41/397 (10%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+QIH IKS L + V + L+N Y ++ + + + + A +W+S++S+
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ L A F +M N+ + +
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFM---------------------------------- 243
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ Y G +K A++VFD MP R+VVSW+ M+ AYA +G L++F + L +
Sbjct: 244 -----ISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 261 LSVND-FTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
D FT SV+ C + L G +H K + KCG I+ A
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF R++ WNS++ + H ++ ++F M G +PN ITF+ +L AC+H
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 380 GLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G++D+ ++ F +M Y +EP +HY MVDLLGR GK++EA +++ +P + + +
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLES 478
Query: 439 FLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSN 475
L C+ G E A A+R+ EL S +SN
Sbjct: 479 LLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSN 515
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 173/369 (46%), Gaps = 44/369 (11%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLP---VFSLQAFEEAQEKSATTWSSVISSL 139
QQ HA ++K+ L + L+ F + P ++ + T +SVI +
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
A + P +A+ FR+M++ + PD + F +KACA + G+ IH +K+G DV
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FV ++ V++YG+ G + ARKV D MP R+ VSW+ ++ AY G + A LF E +E
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE--ME 233
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ +V + F I G G+++ A
Sbjct: 234 ERNVESWNF-----------------MISGYA--------------------AAGLVKEA 256
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM-KNVGMRPNFITFLCLLYACSH 378
VF+ P+R++ WN+M+ A A EV ++F++M + +P+ T + +L AC+
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
G + +G+ + +GIE +VD+ + GK+ +AL++ +A S W +
Sbjct: 317 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV-STWNS 375
Query: 439 FLTGCRLHG 447
++ +HG
Sbjct: 376 IISDLSVHG 384
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 205/437 (46%), Gaps = 30/437 (6%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMII- 157
+V LI+ Y K V + + F+E E++ TW+++I N LA F ++ +
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC 60
Query: 158 -DNIRPDDHI--FPSAI---KACAILGRCDIG-KSIHAFVVKTGFDVD------------ 198
+ + + I + I KA + R K++ A+ V G V+
Sbjct: 61 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 120
Query: 199 ------VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKL 252
FV S + Y + G++ AR +F + R++V W+ +I YA G ++A+
Sbjct: 121 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 180
Query: 253 FKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
F E + T SS++ C S L++GR++H L + K
Sbjct: 181 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 240
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
CG +E A+ VF +R++ NSM+ A H +E ++F M+++ ++P+ ITF+ +
Sbjct: 241 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 300
Query: 373 LYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPT 432
L AC HGG + +G + F MK ++P +H+ ++ LLGR+GKL+EA ++K M ++P
Sbjct: 301 LTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 360
Query: 433 ESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMN----VLLSNXXXXXXXXXXXXX 488
++V GA L C++H D E+A I G +++ + +SN
Sbjct: 361 DTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEA 420
Query: 489 XXKMLRDRGVKKETGLS 505
+ RG++K GLS
Sbjct: 421 LRVEMEKRGLEKSPGLS 437
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 173/341 (50%), Gaps = 2/341 (0%)
Query: 82 GQQIHAHIIKS-SLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+++HAH++KS + P V LI+ Y K + F +++++A +W++++S A
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
N A+ M + RPD + + CA L GK IH + +K F +V
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +S + MY KCG + ++FD + +RNV +W+ MI Y + +++F+ LL
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSK 514
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ T V+ VC + L+LG+++HG LK ++ KCG + +A+
Sbjct: 515 HRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSAN 574
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
F+ ++ W +++ A + + F++M + G PN TF +L CS G
Sbjct: 575 FSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
Query: 381 LIDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEA 420
+D+ ++F LM + Y ++P +HY+ +++LL R G+++EA
Sbjct: 635 FVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 172/369 (46%), Gaps = 9/369 (2%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G + HA IK+ L + + L++ Y K + + F+E E+ W ++I+ LA
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 141 QNELPSLAIEYFRQMII-DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD- 198
N+ A+ FR MI + I P+ I + + + +GK +HA V+K+ V+
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
FV S +D+Y KCG++ + R+VF +RN +SW+ ++ YA G + AL+
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
E + T ++V+ VC ++ G++IH LK + KCGV E
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEY 471
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
R+F+ RN+ W +M+ ++ ++F M RP+ +T +L CS
Sbjct: 472 PIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSD 531
Query: 379 GGLIDKGQQYFG--LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
+ G++ G L K++ P A ++ + G+ G L+ A A+ ++ + + W
Sbjct: 532 LKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVKGSLT-W 588
Query: 437 GAFLT--GC 443
A + GC
Sbjct: 589 TAIIEAYGC 597
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 12/314 (3%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWS-----SVI 136
G+Q+H HI + L+S + L++ Y+ + + F+E+ + +W+ +VI
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 137 SSLAQNELPSLAIEYFRQMIID-NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF 195
S + + R++ +D N+ ++F S A A+ G HA +K G
Sbjct: 190 SGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ----GLKTHALAIKNGL 245
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKE 255
VF+ +S VDMY KCG++ AR+VFDE+ ER++V W MI A AL LF+
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 256 ALLED-LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKC 313
+ E+ + N ++++ V G+ L+LG+++H LK+ +Y KC
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 314 GVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLL 373
G + + RVF + RN W +++ A + ++ + M+ G RP+ +T +L
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 374 YACSHGGLIDKGQQ 387
C+ I +G++
Sbjct: 426 PVCAELRAIKQGKE 439
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 3/198 (1%)
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
E AL + + VN TFS+++ C L G+Q+H +
Sbjct: 93 EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKL 152
Query: 307 XXXXXKCGVIEAASRVFNEAPIRNLGMWNSML--IACAQHAHTEEVFKLFDRMKNVGMRP 364
CG ++ A +VF+E+ N+ WN++L + ++V F M+ +G+
Sbjct: 153 VHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL 212
Query: 365 NFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDII 424
N + + + + + +G + L G+ ++VD+ + GK+ A +
Sbjct: 213 NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 425 KAMPIEPTESVWGAFLTG 442
+ +E VWGA + G
Sbjct: 273 DEI-VERDIVVWGAMIAG 289
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 187/417 (44%), Gaps = 47/417 (11%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ IHA +K+ L V L+ YS+ + +AF++ EK+ +W+S++
Sbjct: 392 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL----H 447
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS---IHAFVVKTGFDVD 198
L S ++ R+ + D I D + + I + + + D+G + A +K+ +
Sbjct: 448 GYLESGELDEARR-VFDKIPEKDAVSWNLIIS-SYAKKGDMGNACSLFSAMPLKSPASWN 505
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGE------------- 245
+ +G Y C E+K AR FD MP++N VSW MI Y LG+
Sbjct: 506 ILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSK 560
Query: 246 ------------------DENALKLFKEALLED--LSVNDFTFSSVIRVCGNSTLLELGR 285
++ALKLF + L + + ++ T SSV+ G
Sbjct: 561 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 620
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA 345
+ + K G A ++F+ ++ +++M++ C +
Sbjct: 621 WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 680
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
E LF M + PN +TF LL A SH GL+ +G + F MKD+ +EP A HY
Sbjct: 681 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYG 740
Query: 406 TMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL 462
MVD+LGRAG+L+EA ++IK+MP++P VWGA L LH + E A +L
Sbjct: 741 IMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKL 797
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 180/400 (45%), Gaps = 29/400 (7%)
Query: 81 KGQQIHAHIIKSSLQSI-PLVSHHLINFYSK--TQLPVFSLQAFEEAQEKSATTWSSVIS 137
+ +Q+HA ++ + + P++ H ++F + + + + + + +W ++
Sbjct: 287 QAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVR 346
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
L+Q+ ++ + M I P H S ++AC + GK IHA +K G
Sbjct: 347 FLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCG 406
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF---- 253
V+V + V +Y + G I+ A+K FD++ E+N VSW+ ++ Y GE + A ++F
Sbjct: 407 CVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP 466
Query: 254 -KEALLEDLSVNDFT-----------FSSVIRVCGNSTLLELGRQIHGLCLK---TSYDX 298
K+A+ +L ++ + FS++ S + +G ++ +K T +D
Sbjct: 467 EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDA 526
Query: 299 XXXXX----XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLF 354
K G +++A +F ++ ++++M+ Q+ ++ KLF
Sbjct: 527 MPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 586
Query: 355 DRM--KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLG 412
+M +N ++P+ IT ++ A S G G + ++GI+ +++DL
Sbjct: 587 AQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYM 646
Query: 413 RAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELA 452
+ G +A + + + T S + A + GC ++G A A
Sbjct: 647 KGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATEA 685
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 177/346 (51%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H +++KS L+ V+ L + Y K + + + F+E +++A W++++ Q
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N AI F M + P + + A A +G + GK HA + G ++D +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+S ++ Y K G I+ A VFD M E++VV+W+ +I Y G E+A+ + + LE L
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+ T ++++ + L+LG+++ C++ S++ KCG I A +
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
VF+ ++L +WN++L A A+ + E +LF M+ G+ PN IT+ ++ + G
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
+D+ + F M+ GI P + TM++ + + G +EA+ ++ M
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 206/454 (45%), Gaps = 47/454 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+++ + I+ S +S +++ +++ Y+K V + + F+ EK W++++++ A+
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
+ L A+ F M ++ + P+ V
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPN-----------------------------------VIT 478
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEAL 257
+ + + G++ A+ +F +M N++SW+ M+ G E A+ ++
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT-SYDXXXXXXXXXXXXXXKCGVI 316
L N F+ + + C + L +GR IHG ++ + KCG I
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
A +VF L + N+M+ A A + + +E L+ ++ VG++P+ IT +L AC
Sbjct: 599 NKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Query: 377 SHGGLIDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
+H G I++ + F ++ ++P +HY MVDLL AG+ ++AL +I+ MP +P +
Sbjct: 659 NHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARM 718
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRD 495
+ + C EL + + ++ E +SG V +SN +M++
Sbjct: 719 IQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 496 RGVKKETGLSWI----EEGNRVHTFAAGDRSHEK 525
+G+KK+ G SWI EEG VH F A D++H +
Sbjct: 779 KGLKKKPGCSWIQITGEEG--VHVFVANDKTHTR 810
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 173/363 (47%), Gaps = 3/363 (0%)
Query: 82 GQQIHAHIIKSS--LQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
G+QIHA I+K+ + L+ FY+K + F + + ++ +W+++I
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDV 199
+ L A+ F +M+ + I PD+ + P+ KAC L G+ +H +VVK+G + V
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FV SS DMYGKCG + +A KVFDE+P+RN V+W+ ++ Y G++E A++LF + +
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
+ T S+ + N +E G+Q H + + + K G+IE A
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHG 379
VF+ +++ WN ++ Q E+ + M+ ++ + +T L+ A +
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART 388
Query: 380 GLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAF 439
+ G++ + E +T++D+ + G + +A + + +E +W
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTL 447
Query: 440 LTG 442
L
Sbjct: 448 LAA 450
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 3/335 (0%)
Query: 122 EEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCD 181
E+A S+T++ +SSL +N A+ +M N+R I+ ++ C
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 182 IGKSIHAFVVKTG--FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICA 239
GK IHA ++K G + + ++ + V Y KC ++ A +F ++ RNV SW+ +I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 240 YALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXX 299
+G E AL F E L ++ ++F +V + CG GR +HG +K+ +
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 300 XXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
KCGV++ AS+VF+E P RN WN++++ Q+ EE +LF M+
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G+ P +T L A ++ G +++G+Q + G+E ++++ + G ++
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 420 ALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAF 454
A + M E W ++G G E A +
Sbjct: 328 AEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIY 361
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 40/345 (11%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+Q HA I + ++ ++ L+NFY K L ++ F+ EK TW+ +IS
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
Q L AI + M ++ ++ D + + A A +GK + + ++ F+ D+
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ S+ +DMY KCG I +A+KVFD E++++ W+ ++ AYA G AL+LF LE
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ N T++ +I L L R G ++ A
Sbjct: 472 VPPNVITWNLII--------LSLLRN---------------------------GQVDEAK 496
Query: 321 RVF----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
+F + I NL W +M+ Q+ +EE +M+ G+RPN + L AC
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 377 SHGGLIDKGQQYFG-LMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
+H + G+ G ++++ ++VD+ + G + +A
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 192/387 (49%), Gaps = 5/387 (1%)
Query: 81 KGQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
+G+Q+H+ ++KS S V++ L+++YS S+++F EK +W+S++S
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-D 198
A +++ F +M RP F S + C+ GK IH +V+K GFDV
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+ V S+ +DMYGKC I+N+ ++ +P N+ + ++ + G ++ +++F +
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 259 EDLSVNDFTFSSVIRVCGNST--LLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
E +++ T S+V++ S L +H +K+ Y K G
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
E + +VF+E N+ S++ A++ + K+ M + + P+ +T L +L C
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Query: 377 SHGGLIDKGQQYF-GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESV 435
SH GL+++G+ F L YGI PG + YA MVDLLGRAG +++A ++ +
Sbjct: 531 SHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVA 590
Query: 436 WGAFLTGCRLHGDAELAAFAADRIFEL 462
W + L CR+H + + AA+ + L
Sbjct: 591 WSSLLQSCRIHRNETIGRRAAEVLMNL 617
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 151/312 (48%), Gaps = 2/312 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+AF+E + T++ +IS ++ AIE + +M+ +R FPS + C+
Sbjct: 67 EAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDEL 126
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMIC 238
C G +H V+ GF ++FV S+ V +Y + A K+FDEM +RN+ + ++
Sbjct: 127 FCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLR 186
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
+ GE + +++ LE ++ N T+ +IR C + L+ G+Q+H L +K+ ++
Sbjct: 187 CFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNI 246
Query: 299 XXX-XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM 357
CG + + R FN P +++ WNS++ CA + + LF +M
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY-ATMVDLLGRAGK 416
+ G RP+ F+ L CS I G+Q + G + + H + ++D+ G+
Sbjct: 307 QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 417 LQEALDIIKAMP 428
++ + + +++P
Sbjct: 367 IENSALLYQSLP 378
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 140/299 (46%), Gaps = 2/299 (0%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G Q+H +I V L+ Y+ +L +L+ F+E +++ + ++
Sbjct: 130 EGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-DV 199
Q E + +M ++ + + + I+ C+ GK +H+ VVK+G+++ ++
Sbjct: 190 QTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNI 249
Query: 200 FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLE 259
FV + VD Y CG++ + + F+ +PE++V+SW+ ++ A G ++L LF +
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX-KCGVIEA 318
+ F S + C ++ ++ G+QIH LK +D KC IE
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
++ ++ P NL NS++ + T+++ ++F M + G + +T +L A S
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
V+ + +D K G + +A + FDEM R+VV+++ +I + G A++L+ E +
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
L + TF SV+ VC + G Q+H + + +++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A ++F+E RNL + N +L Q ++ +F+++ RM+ G+ N +T+ ++ CSH
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYA-TMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
L+ +G+Q L+ G A +VD G L ++ A+P + S W
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WN 284
Query: 438 AFLTGCRLHG 447
+ ++ C +G
Sbjct: 285 SIVSVCADYG 294
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 181/393 (46%), Gaps = 2/393 (0%)
Query: 85 IHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNEL 144
IH I S L + ++ YSK L V + + F + W+ +I
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
I F M +P+ + + + S+HAF +K D +VG +
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCA 247
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
V+MY +C I +A VF+ + E ++V+ S +I Y+ G + AL LF E + +
Sbjct: 248 LVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPD 307
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
+ V+ C + G+++H ++ + KCG+++ A +F
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
P +N+ +NS+++ H F+ F + +G+ P+ ITF LL C H GL++K
Sbjct: 368 GIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNK 427
Query: 385 GQQYFGLMK-DYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGC 443
GQ+ F MK ++GIEP +HY MV L+G AGKL+EA + + ++ + GA L+ C
Sbjct: 428 GQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCC 487
Query: 444 RLHGDAELAAFAADRIFELG-HVSSGMNVLLSN 475
+H + LA A+ I + G S V+LSN
Sbjct: 488 EVHENTHLAEVVAENIHKNGEERRSVYKVMLSN 520
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 165/381 (43%), Gaps = 1/381 (0%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
Q++H+ + KS L P + L FY+ + + + F+ E+S W+S+I + A+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVG 202
+ + F Q++ + RPD+ + + + + IH + +G D G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S+ V Y K G I A K+F +P+ ++ W+ MI Y G + + LF
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
N +T ++ + +LL + +H CLK + D +C I +A V
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
FN +L +S++ ++ + +E LF ++ G +P+ + +L +C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
G++ + G+E + + ++D+ + G L+ A+ + +P E + + + G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILG 383
Query: 443 CRLHGDAELAAFAADRIFELG 463
LHG A A I E+G
Sbjct: 384 LGLHGFASTAFEKFTEILEMG 404
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 162/344 (47%), Gaps = 18/344 (5%)
Query: 182 IGKSIHAFVVKTGFDVDV-FVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
+G+ +H V K GF + +G++ + Y K G+++ ARKVFDEMPER V+W+ MI Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 241 ALLGEDEN-----ALKLFKE--ALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLK 293
+ N A+ LF+ + D T V+ + LLE+G +HG K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 294 TSY--DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVF 351
+ + KCG + A VF ++N+ W SM A + E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 352 KLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDL 410
L +RM G++PN ITF LL A H GL+++G + F MK +G+ P +HY +VDL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 411 LGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMN 470
LG+AG++QEA I AMPI+P + + C ++G+ + + E+ ++
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 471 -------VLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
V LSN K +++R +K G S++
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 82 GQQIHAHIIK-SSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G+ +H + K L L+ L++FY+K ++ + F+E E+++ TW+++I
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 141 Q-----NELPSLAIEYFRQMII--DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT 193
N A+ FR+ +RP D + A + G +IG +H ++ K
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 194 GF--DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALK 251
GF +VDVF+G++ VDMY KCG + NA VF+ M +NV +W+ M AL G
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
L + N+ TF+S++ + L+E G ++
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIEL 345
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 281 LELGRQIHGLCLKTSY-DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLI 339
L +GR +HG+ K + K G + A +VF+E P R WN+M+
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 340 ACAQHA-----HTEEVFKLFDRMK--NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM 392
H + + LF R G+RP T +C+L A S GL++ G G +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 393 KDYGIEPGAQHY--ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
+ G P + +VD+ + G L A + + M ++ + W + TG L+G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFT-WTSMATGLALNGRGN 305
Query: 451 LAAFAADRIFELG 463
+R+ E G
Sbjct: 306 ETPNLLNRMAESG 318
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 43/420 (10%)
Query: 145 PSLAIEYFRQMIIDNIRPDDHIFPSAI----KACAILGRCDIGKSIHAFVVKTGFDVDVF 200
P A+ ++ ++ PD + F S I K C + D GK H +K G D +
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCV----DSGKMCHGQAIKHGCDQVLP 154
Query: 201 VGSSTVDMYGKCG-------------------------------EIKNARKVFDEMPERN 229
V +S + MY CG ++ A K+FDEMP++N
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 230 VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
++SW+ MI AY ++ LF+E + N+ T ++ CG S L+ GR +H
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE 349
++T + KC + A R+F+ IRN WN M++A H E
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG 334
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMV 408
+LF+ M N +RP+ +TF+ +L C+ GL+ +GQ Y+ LM D + I+P H M
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA 394
Query: 409 DLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHV 465
+L AG +EA + +K +P + P + W L+ R G+ L A + E +
Sbjct: 395 NLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPL 454
Query: 466 SSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIEEGNRVHTFAAGDRSHEK 525
+ LL N +M+++R + + G ++ VH G + EK
Sbjct: 455 NYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCKEAEK 514
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 94/170 (55%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+E +K+ +W+ +IS+ P ++I FR+M+ + ++ + AC R
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY 240
G+S+HA +++T + V + ++ +DMYGKC E+ AR++FD + RN V+W+ MI A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 241 ALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
L G E L+LF+ + L ++ TF V+ C + L+ G+ + L
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 100/279 (35%), Gaps = 47/279 (16%)
Query: 203 SSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
S TV +Y G++ A VF AY + + AL + + L
Sbjct: 71 SYTVSIYRSIGKLYCANPVFK---------------AYLVSSSPKQALGFYFDILRFGFV 115
Query: 263 VNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRV 322
+ +TF S+I + ++ G+ HG +K D CG ++ A ++
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 323 FNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM--KNV-------------------- 360
F E P R++ WNS++ ++ KLFD M KN+
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 361 ---------GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLL 411
G + N T + LL AC + +G+ + + ++D+
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 412 GRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAE 450
G+ ++ A I ++ I + W + LHG E
Sbjct: 296 GKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPE 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+G+ +HA +I++ L S ++ LI+ Y K + + + F+ ++ TW+ +I +
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+ P +E F MI +RPD+ F + CA G G+S ++ +V F +
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE-FQIKPN 386
Query: 201 VGSS--TVDMYGKCGEIKNARKVFDEMPERNV----VSWSGMICAYALLG 244
G ++Y G + A + +P+ +V W+ ++ + G
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 202/473 (42%), Gaps = 52/473 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H I SS + V + LI+ Y + + + F+ E+ A +W+++I+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 142 NELPSLAIEYFRQMIID-----------------------------------NIRPDDHI 166
E A + +M + N+R
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 167 FPSAIKACAILGRCDIGKSIHAFVVKT---GFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+ +KAC+ +G GK H V+++ D+D V +S + MY +C ++++A VF
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQ 381
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
++ ++ +W+ +I +A E L KE LL N T +S++ + L+
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 284 GRQIHGLCLK-TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
G++ H L+ SY K G I AA RVF+ R+ + S++
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGA 401
+ E F M G++P+ +T + +L ACSH L+ +G F M+ +GI
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF- 460
+HY+ MVDL RAG L +A DI +P EP+ ++ L C +HG+ + +AAD++
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 461 -----ELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIE 508
LGH +LL++ +L D GV+K + +E
Sbjct: 622 ETKPEHLGHY-----MLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQ+HAH I S L+ ++ L+ FYS L + E ++ W+ +I S +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ ++ +++M+ IR D+ +PS IKACA L G+ +H + + +++V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ + MY + G++ AR++FD M ER+ VSW+ +I Y + A KL L +
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 262 SVNDFTFSSV-----------------------------------IRVCGNSTLLELGRQ 286
+ T++++ ++ C + L+ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 287 IHGLCLKT---SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
H L +++ S+D +C + A VF + +L WNS++ A
Sbjct: 342 FHCLVIRSCSFSHD-IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 344 HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG-LMKDYGIEPGAQ 402
+ +EE L M G PN IT +L + G + G+++ +++ +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 403 HYATMVDLLGRAGKLQEALDIIKAM 427
+ ++VD+ ++G++ A + +M
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 5/236 (2%)
Query: 150 EYFRQMIIDNIRPDDHIF-----PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
E FR + + H F S + C G+ +HA + +G + D +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
V Y + A+ + + + + W+ +I +Y + ++ ++K + + + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
+FT+ SVI+ C GR +HG +S+ + G ++ A R+F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+ WN+++ E FKL DRM G+ + +T+ + C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 202/473 (42%), Gaps = 52/473 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
G+ +H I SS + V + LI+ Y + + + F+ E+ A +W+++I+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 142 NELPSLAIEYFRQMIID-----------------------------------NIRPDDHI 166
E A + +M + N+R
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 167 FPSAIKACAILGRCDIGKSIHAFVVKT---GFDVDVFVGSSTVDMYGKCGEIKNARKVFD 223
+ +KAC+ +G GK H V+++ D+D V +S + MY +C ++++A VF
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQ 381
Query: 224 EMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLEL 283
++ ++ +W+ +I +A E L KE LL N T +S++ + L+
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 284 GRQIHGLCLK-TSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACA 342
G++ H L+ SY K G I AA RVF+ R+ + S++
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 343 QHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGA 401
+ E F M G++P+ +T + +L ACSH L+ +G F M+ +GI
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF- 460
+HY+ MVDL RAG L +A DI +P EP+ ++ L C +HG+ + +AAD++
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 461 -----ELGHVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWIE 508
LGH +LL++ +L D GV+K + +E
Sbjct: 622 ETKPEHLGHY-----MLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
GQQ+HAH I S L+ ++ L+ FYS L + E ++ W+ +I S +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFV 201
N+ ++ +++M+ IR D+ +PS IKACA L G+ +H + + +++V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
++ + MY + G++ AR++FD M ER+ VSW+ +I Y + A KL L +
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 262 SVNDFTFSSV-----------------------------------IRVCGNSTLLELGRQ 286
+ T++++ ++ C + L+ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 287 IHGLCLKT---SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQ 343
H L +++ S+D +C + A VF + +L WNS++ A
Sbjct: 342 FHCLVIRSCSFSHD-IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 344 HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG-LMKDYGIEPGAQ 402
+ +EE L M G PN IT +L + G + G+++ +++ +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 403 HYATMVDLLGRAGKLQEALDIIKAM 427
+ ++VD+ ++G++ A + +M
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 5/236 (2%)
Query: 150 EYFRQMIIDNIRPDDHIF-----PSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSS 204
E FR + + H F S + C G+ +HA + +G + D +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 205 TVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVN 264
V Y + A+ + + + + W+ +I +Y + ++ ++K + + + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 265 DFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN 324
+FT+ SVI+ C GR +HG +S+ + G ++ A R+F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 325 EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGG 380
R+ WN+++ E FKL DRM G+ + +T+ + C G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 154/337 (45%), Gaps = 37/337 (10%)
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLF-------------- 253
MY G + +A KVFDEMPERN V+W+ MI LG+ E AL
Sbjct: 1 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 60
Query: 254 ----------KEALL--------EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTS 295
KEA+L + + N+ T +++ N L++ +H K
Sbjct: 61 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 120
Query: 296 Y-DXXXXXXXXXXXXXXKCGVIEAASRVFNEAP--IRNLGMWNSMLIACAQHAHTEEVFK 352
+ KCG I++A + F E P +NL W +M+ A A H +E
Sbjct: 121 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVS 180
Query: 353 LFDRMKNVGMRPNFITFLCLLYACSHGGLIDKG-QQYFGLM-KDYGIEPGAQHYATMVDL 410
+F M+ +G++PN +T + +L ACSHGGL ++ ++F M +Y I P +HY +VD+
Sbjct: 181 MFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDM 240
Query: 411 LGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMN 470
L R G+L+EA I +PIE VW L C ++ DAELA ++ EL G
Sbjct: 241 LRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDY 300
Query: 471 VLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
VL+SN K + RGV K G S +
Sbjct: 301 VLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACA 175
+L E+ ++ +W+++I A+ + P AI F +M+ D I+P++ + + A
Sbjct: 42 ALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVW 101
Query: 176 ILGRCDIGKSIHAFVVKTGF-DVDVFVGSSTVDMYGKCGEIKNARKVFDEMP--ERNVVS 232
LG + S+HA+V K GF D+ V +S +D Y KCG I++A K F E+P +N+VS
Sbjct: 102 NLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 161
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLE 282
W+ MI A+A+ G + A+ +FK+ L N T SV+ C + L E
Sbjct: 162 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 211
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 38/324 (11%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
F+ EKS +W++++S AQN A+ F M+ +RP++ + I AC+
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDE---------------- 224
+ +S+ + + ++ FV ++ +DM+ KC +I++AR++F+E
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 225 ----------------MPERNVVSWSGMICAYALLGEDENALKLFKEAL-LEDLSVNDFT 267
MP+RNVVSW+ +I YA G+ A++ F++ + D ++ T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
SV+ CG+ LELG I K + G + A RVF+E
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 328 IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
R++ +N++ A A + E L +MK+ G+ P+ +T+ +L AC+ GL+ +GQ+
Sbjct: 461 ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQR 520
Query: 388 YFGLMKDYGIEPGAQHYATMVDLL 411
F +++ P A HYA M DLL
Sbjct: 521 IFKSIRN----PLADHYACM-DLL 539
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 50/374 (13%)
Query: 83 QQIHAHIIKSSLQSIPLVSH---HLINFYSKTQLPVFSLQ-AFEEAQEKSATTWSSVISS 138
QIHA +I S+P S+ +I+ ++ + P + + F+ + +S+
Sbjct: 23 NQIHAQLI--VFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 139 LAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVD 198
++ ++ + + + Q I PD FP IK+ GR G A V K GF D
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA---GR--FGILFQALVEKLGFFKD 135
Query: 199 VFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALL 258
+V + +DMY K +++ARKVFD++ +R W+ MI Y G E A KLF
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF----- 190
Query: 259 EDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEA 318
D+ + S + + G + + +L E
Sbjct: 191 -DMMPENDVVSWTVMITGFAKVKDL---------------------------------EN 216
Query: 319 ASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSH 378
A + F+ P +++ WN+ML AQ+ TE+ +LF+ M +G+RPN T++ ++ ACS
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 379 GGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGA 438
+ L+ + + ++D+ + +Q A I + + W A
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 439 FLTGCRLHGDAELA 452
++G GD A
Sbjct: 337 MISGYTRIGDMSSA 350
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 116/285 (40%), Gaps = 34/285 (11%)
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEAL 257
DV + + + K +++NARK FD MPE++VVSW+ M+ YA G E+AL+LF + L
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 258 LEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+ N+ T+ VI C L R + L + KC I+
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 318 AASRVFNE--------------------------------APIRNLGMWNSMLIACAQHA 345
+A R+FNE P RN+ WNS++ A +
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 346 HTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
+ F+ M + G +P+ +T + +L AC H ++ G ++ I+ Y
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+++ + R G L EA + M S + T +GD
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVS-YNTLFTAFAANGDG 480
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 1/170 (0%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMI-IDNIRPDDHIFPSAIKACAIL 177
Q F+ +++ +W+S+I+ A N +LAIE+F MI + +PD+ S + AC +
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 178 GRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMI 237
++G I ++ K ++ S + MY + G + A++VFDEM ER+VVS++ +
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLF 471
Query: 238 CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
A+A G+ L L + E + + T++SV+ C + LL+ G++I
Sbjct: 472 TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 191/441 (43%), Gaps = 45/441 (10%)
Query: 82 GQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
G IH+ ++K L+ +V + LI+ Y K ++ F+ +EK +W+++++S +
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 141 QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVF 200
+N L + +F QM P+ D
Sbjct: 235 RNGKLELGLWFFHQM------PNP---------------------------------DTV 255
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED 260
+ +D + K G+ NA +V +MP N SW+ ++ Y + A + F +
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSG 315
Query: 261 LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS 320
+ ++++ S V+ ++ G IH K D KCG+++ A
Sbjct: 316 VRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAE 375
Query: 321 RVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG-MRPNFITFLCLLYACSHG 379
+F P +NL +WN M+ A++ + E KLF+++K ++P+ TFL LL CSH
Sbjct: 376 LMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHC 435
Query: 380 GL-IDKGQQYFGLM-KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWG 437
+ ++ YF +M +Y I+P +H +++ +G+ G++ +A +I+ W
Sbjct: 436 EVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWR 495
Query: 438 AFLTGCRLHGDAELAAFAADRIFELGHVSSG--MNVLLSNXXXXXXXXXXXXXXXKMLRD 495
A L C D + A A ++ ELG + +++SN K++R+
Sbjct: 496 ALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRE 555
Query: 496 RGVKKETGLSWIEEGNRVHTF 516
GV KE G SWI+ + ++
Sbjct: 556 SGVLKEVGSSWIDSRTKCSSY 576
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 44/317 (13%)
Query: 128 SATTWSSVISSLAQNELPSLAI-EYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSI 186
S+ +WS+++ +LA+ S+ + ++I D +PD ++ G + + +
Sbjct: 20 SSNSWSTIVPALAR--FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 187 HAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGED 246
H +V K GF + + +S + Y +++A KVFDEMP+ +V+SW+ ++ Y G
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX- 305
+ + LF E D+ N+F+F++ + C L LG IH +K +
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 306 XXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
KCG ++ A VF ++ WN+++ +C+++ E F +M N P+
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PD 253
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
+T Y ++D ++G A ++
Sbjct: 254 TVT-----------------------------------YNELIDAFVKSGDFNNAFQVLS 278
Query: 426 AMPIEPTESVWGAFLTG 442
MP P S W LTG
Sbjct: 279 DMP-NPNSSSWNTILTG 294
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 158/368 (42%), Gaps = 41/368 (11%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+Q+H ++ K S +S+ L+ FY + + + F+E + +W+S++S Q+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV-DVFV 201
I F ++ ++ P++ F +A+ ACA L +G IH+ +VK G + +V V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
G+ +DMYGKCG + +A VF M E++ VSW+ ++ + + G+ E L F + D
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPD- 253
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
T++ +I K G A +
Sbjct: 254 ---TVTYNELIDA-----------------------------------FVKSGDFNNAFQ 275
Query: 322 VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGL 381
V ++ P N WN++L + E + F +M + G+R + + +L A + +
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 382 IDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLT 441
+ G G++ + ++D+ + G L+ A + MP VW ++
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMIS 394
Query: 442 GCRLHGDA 449
G +GD+
Sbjct: 395 GYARNGDS 402
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 251 KLFKEA--LLEDLSVNDFT-FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
+L+K+A LL+ ++ D F + C N LE +++H L++ +
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 308 XXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
+C I A RVF+ +++ W+ M+ A + + ++ LF+ M G++PN
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEE 338
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMKD-YGIEPGAQHYATMVDLLGRAGKLQEALDIIKA 426
TFL + AC+ G I++ +F MK+ +GI P +HY ++ +LG+ G L EA I+
Sbjct: 339 TFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Query: 427 MPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL 462
+P EPT W A RLHGD +L + + + ++
Sbjct: 399 LPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDV 434
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 117 SLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
S Q+ + E + + L Q L AIE ++ PD F ++CA
Sbjct: 193 SNQSPNQMNEVAPPPSVEEVMRLCQRRLYKDAIE----LLDKGAMPDRECFVLLFESCAN 248
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGM 236
L + K +H +++ F D + + + M+G+C I +A++VFD M ++++ SW M
Sbjct: 249 LKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLM 308
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELG-------RQIHG 289
+CAY+ G ++AL LF+E L N+ TF +V C +E + HG
Sbjct: 309 MCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHG 368
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG-MWNSM 337
+ KT + KCG + A + + P W +M
Sbjct: 369 ISPKTEH------YLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 83 QQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQN 142
+++H H ++S + P +++ +I+ + + + + F+ +K +W ++ + + N
Sbjct: 256 KKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDN 315
Query: 143 ELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG-------RCDIGKSIHAFVVKTGF 195
+ A+ F +M ++P++ F + ACA +G D K+ H KT
Sbjct: 316 GMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKT-- 373
Query: 196 DVDVFVGSSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMICAYALLGEDENALKLFK 254
+ ++G + + GKCG + A + ++P E W M YA L D + L+ +
Sbjct: 374 --EHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMR-NYARLHGDID-LEDYM 427
Query: 255 EALLEDL 261
E L+ D+
Sbjct: 428 EELMVDV 434
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
++CG + L+ + +HG + CG+ A+ VF + +NL
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM 392
W ++ A++ E+ +F R K G P+ F + YAC G +D+G +F M
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 393 -KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAEL 451
+DYGI P + Y ++V++ G L EAL+ ++ MP+EP VW + R+HG+ EL
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 452 AAFAADRI 459
+ A+ +
Sbjct: 442 GDYCAEVV 449
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 90 IKSSLQSIPLVSHH-LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLA 148
I +S+ + L S+H L+ YS L + FE+ EK+ TW +I A+N A
Sbjct: 280 ISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDA 339
Query: 149 IEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIG-KSIHAFVVKTGFDVDVFVGSSTVD 207
I+ F + + PD +F AC +LG D G + G + S V+
Sbjct: 340 IDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVE 399
Query: 208 MYGKCGEIKNARKVFDEMP-ERNVVSWSGMI 237
MY G + A + + MP E NV W ++
Sbjct: 400 MYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
++CG LE R +H + C ++ A +VF E P N G
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ-QYFGL 391
M+ + + EE LF R K G +PN F + C+ G + +G Q+ +
Sbjct: 187 TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 392 MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAEL 451
++YGI P +HY ++ +L +G L EAL+ ++ MP+EP+ VW + R+HGD EL
Sbjct: 247 YREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL 306
Query: 452 AAFAADRIFEL 462
A+ + +L
Sbjct: 307 GDRCAELVEKL 317
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN 330
+ ++CG++ L+ + +H + CG +E A VFN P RN
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF- 389
L W ++ A++ E+ F R K G +P+ F + +AC G +++G +F
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 390 GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
+ K+YGI P +HY ++V +L G L EAL +++M EP +W + R+HGD
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDL 364
Query: 450 ELAAFAADRIFEL 462
L D + +L
Sbjct: 365 ILGDRCQDMVEQL 377
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 184 KSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALL 243
K +H F+ + D+ +S ++MY CG +++A VF+ MPERN+ +W G+I +A
Sbjct: 201 KVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKN 260
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCG 276
G+ E+A+ F E + F + CG
Sbjct: 261 GQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACG 293
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 21/256 (8%)
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
++CG LE R +H C+ T D C + A VFNE P RN
Sbjct: 120 KLCGEVEALEEARVVHD-CI-TPLDARSYHTVIEMYSG--CRSTDDALNVFNEMPKRNSE 175
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF-GL 391
W +M+ A++ E +F R G +P+ F + +AC G I++G +F +
Sbjct: 176 TWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 392 MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAEL 451
+DYG+ + Y ++++L G L EALD ++ M +EP+ +W + C + G EL
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 452 AAFAADRIFELG----HVSSGMNVLLSNXXXXXXXXXXXXXXXKMLRDRGVKKETGLSWI 507
A+ I +L S ++ + +M+RD
Sbjct: 296 GDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRD------------ 343
Query: 508 EEGNRVHTFAAGDRSH 523
+ R+H F AGD SH
Sbjct: 344 DPKKRMHEFRAGDTSH 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 87 AHIIKSSLQSIPLVSHH-LINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELP 145
A ++ + + S+H +I YS + +L F E ++++ TW ++I LA+N
Sbjct: 131 ARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEG 190
Query: 146 SLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF---VVKTGFDVDVFVG 202
AI+ F + I + +PD IF + AC +G DI + + F G + +
Sbjct: 191 ERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIG--DINEGLLHFESMYRDYGMVLSMEDY 248
Query: 203 SSTVDMYGKCGEIKNARKVFDEMP-ERNVVSWSGMI 237
+ ++M CG + A + M E +V W ++
Sbjct: 249 VNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 104 LINFYSKTQLPVFSLQAF----EEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
LIN Y+K +L+ EE + + T+S +I+ + + + A F M+ +
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
++PD ++ + I A +G D + K + Y K G+++ +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 220 KVFDEMPE----RNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
+VFD M V +++G+I + E A+++ E L +S N+ T++ +++
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ-- 667
Query: 276 GNSTLLELGRQIHGLCL--KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG- 332
G +++ + G+ D K G +++A V E RN+
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 333 ---MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF 389
++N ++ A+ E L +MK G++P+ T+ + ACS G +++ Q
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 390 GLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL---DIIKAMPIEPTESVWGAFLT 441
M+ G++P + Y T++ RA ++AL + +KAM I+P ++V+ LT
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 144/382 (37%), Gaps = 46/382 (12%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+A+ + +I + Q A R+M + I I+ + + ++ G +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
+ + GF V +++Y K G+I A +V M E N+ ++S MI + L
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRV-CGNS-------TLLELGRQIHGLCLKT- 294
+ NA +F++ + E + + ++++I CG T+ E+ + H +T
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 295 -------SYDXXXXXXXXXXXXXXKCGVI-------------------EAASRVFNEAPI 328
+ +CG + E A + +E +
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 329 ----RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
N + ++ A T + F+ F R++N G+ + T+ LL AC G +
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLT 441
M I + Y ++D R G + EA D+I+ M ++P + +F++
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 442 GCRLHGDAELAAFAADRIFELG 463
C GD A + + LG
Sbjct: 773 ACSKAGDMNRATQTIEEMEALG 794
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 206 VDMYGKCGEIKNARKVFDEMPERNVVS----WSGMICAYALLGEDENALKLFKEALLEDL 261
V YG+ G++ AR+ F+ M R + ++ +I AYA+ + + AL ++ E +
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 262 SVNDFTFSSVIRVCGNSTLLELG-------RQIHGLCLKTSYDXXXXXXXXXXXXXXKCG 314
++ T+S ++ + E ++IH + Y
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 435
Query: 315 VIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
++ +API ++++M+ A ++ +F R+K G P +T+ CL+
Sbjct: 436 LVREMEEEGIDAPI---AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVD 409
+ G I K + +MK+ G++ + Y+ M++
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
>AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11394744-11395973 REVERSE
Length = 409
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 15/245 (6%)
Query: 208 MYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFKEALLED----LSV 263
M+ CG + R++FD MP R+ SW+ + +G+ E+A LF L +
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 264 NDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY----DXXXXXXXXXXXXXXKCGVIEAA 319
+ V++ C ELG+Q+H LC K + D +C +E A
Sbjct: 192 PSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC--LEDA 249
Query: 320 SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC--- 376
+ V ++ N W + + + +EV + F M N G++ N F +L AC
Sbjct: 250 NLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWV 309
Query: 377 SHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVW 436
S GG GQQ G E ++++ G+ GK+++A + K+ E + S W
Sbjct: 310 SDGG--RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 437 GAFLT 441
A +
Sbjct: 368 NAMVA 372
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 82 GQQIHAHIIKSSLQ-SIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
++ HI+KSS++ +I ++ L+ S +L + + Q F+ + +W+ V
Sbjct: 107 AHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDI-TRQMFDRMPHRDFHSWAIVFLGCI 165
Query: 141 Q----NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGF- 195
+ + L + + + I +KACA++ ++GK +HA K GF
Sbjct: 166 EMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFI 225
Query: 196 -DVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYALLGEDENALKLFK 254
+ D ++ S + YG+ +++A V ++ N V+W+ + GE + ++ F
Sbjct: 226 DEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFI 285
Query: 255 EALLEDLSVNDFTFSSVIRVCG-NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
E + N FS+V++ C S G+Q+H +K ++ K
Sbjct: 286 EMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 314 GVIEAASRVFNEAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
G ++ A +VF + ++ WN+M+ + Q+ E KL +MK G++ +
Sbjct: 346 GKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAH 398
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 82 GQQIHA--HIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSL 139
G+Q+HA H + + +S LI FY + + + + + W++ +++
Sbjct: 212 GKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTND 271
Query: 140 AQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAIL---GRCDIGKSIHAFVVKTGFD 196
+ I F +M I+ + +F + +KAC+ + GR G+ +HA +K GF+
Sbjct: 272 YREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS--GQQVHANAIKLGFE 329
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVS-WSGMICAYALLGEDENALKLFKE 255
D + ++MYGK G++K+A KVF + VS W+ M+ +Y G A+KL +
Sbjct: 330 SDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQ 389
Query: 256 ALLEDLSVND 265
+ +D
Sbjct: 390 MKATGIKAHD 399
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 154/337 (45%), Gaps = 23/337 (6%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQE----KSATTWSSVISSLAQN--ELPSLAIEYFRQMII 157
LI+ Y ++ L ++ F +E + T+++VI + + E +A ++F +M
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA-KFFDEMQR 332
Query: 158 DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN 217
+ ++PD F S + C+ G + +++ + + DVF ++ +D K G++
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 218 ARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI- 272
A ++ +MP + NVVS+S +I +A G + AL LF E ++++ ++++++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 273 ---RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP-- 327
+V + L++ R++ + +K K G + +VF E
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKD----VVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 328 --IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKG 385
+ NL +++++ ++ +E ++F K+ G+R + + + L+ A GL+
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 386 QQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
M GI P Y +++D GR+ + + D
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Query: 269 SSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN---E 325
S++I G + + ++I Y + G+ E A VFN E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 326 APIR-NLGMWNSMLIACAQHA-HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
+R NL +N+++ AC + ++V K FD M+ G++P+ ITF LL CS GGL +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 384 KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE---PTESVWGAFL 440
+ F M + IE Y T++D + + G++ A +I+ MP++ P + +
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 441 TGCRLHG--DAELAAFAADRIFELGHVSSGMNVLLS 474
G G D L F R + N LLS
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 44/266 (16%)
Query: 171 IKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER-- 228
I G+ I K I G+ V+ S+ + YG+ G + A VF+ M E
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 229 --NVVSWSGMICAYALLG-EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
N+V+++ +I A G E + K F E + + TF+S++ VC
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC---------- 349
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM----WNSMLIAC 341
+ G+ EAA +F+E R + +N++L A
Sbjct: 350 -------------------------SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
+ + F++ +M + PN +++ ++ + G D+ FG M+ GI
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAM 427
Y T++ + + G+ +EALDI++ M
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREM 470
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 50/350 (14%)
Query: 116 FSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACA 175
+L+ ++ E T+S++I+ + L + AIE+F +M + PD+ + + + +
Sbjct: 208 MALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 176 ILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVV 231
G+ + S++ V TG+ D S M+G+ G+ R V EM + NVV
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
++ ++ A G+ A LF E L L+ N+ T ++++++ G
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG--------------- 372
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHT 347
K A +++ E + M +N++L CA
Sbjct: 373 --------------------KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 412
Query: 348 EEVFKLFDRMK-NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
EE +LF+ MK +V RP+ ++ +L GG +K + F M G++
Sbjct: 413 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTC 472
Query: 407 MVDLLGRAGKLQEAL---DIIKAMPIEPTESVWGAFLTG---CRLHGDAE 450
+V LG+A ++ + + D+ ++P + + G L+ C DAE
Sbjct: 473 LVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAE 522
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 151/355 (42%), Gaps = 12/355 (3%)
Query: 111 TQLPVFSLQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
T L L E+ + E ++++I L + + A+ F++M IRP+ + S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER- 228
I GR + + +++ + DVF S+ +D + K G++ A K++DEM +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 229 ---NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
++V++S +I + + + A ++F+ + + + T++++I+ +E G
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE----APIRNLGMWNSMLIAC 341
++ + + G + A +F E N+ +N++L
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
++ E+ +F+ ++ M P T+ ++ G ++ G F + G++P
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLH---GDAELAA 453
Y TM+ R G +EA + K M + T G + T R GD E +A
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 117 SLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK 172
+L F+E + K + T+SS+IS L S A MI I PD F + I
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 173 ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER---- 228
A G+ + ++ +VK D + SS ++ + + A+++F+ M +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
+VV+++ +I + E +++F+E L N T++ +I+ + ++ ++I
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQH 344
+ K G +E A VF + +N M+ +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
E+ + LF + G++P+ + + ++ G ++ F MK+ G P + Y
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 405 ATMVDLLGRAGKLQEALDIIKAM 427
T++ R G + + ++IK M
Sbjct: 575 NTLIRARLRDGDREASAELIKEM 597
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 128/304 (42%), Gaps = 12/304 (3%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
T+S++I + + A + + +M+ +I P + S I + R D K + F+
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGED 246
V DV ++ + + K ++ +VF EM +R N V+++ +I G+
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIR-VCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
+ A ++FKE + + + N T+++++ +C N L E + ++ +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL-EKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 306 XXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
K G +E +F ++ ++ +N+M+ + EE LF MK G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA- 420
PN + L+ A G + + M+ G A + ++L G+L ++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Query: 421 LDII 424
LD++
Sbjct: 626 LDML 629
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 214 EIKNARKVFDEM----PERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV--NDFT 267
++ +A +F EM P +++ +S ++ A A + + + + L ++ +++L + N +T
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ--MQNLGIPHNHYT 118
Query: 268 FSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP 327
+S +I + L L + G +K Y+ I A + ++
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 328 IR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
+ N +N+++ H E L DRM G +P+ +T+ ++ G D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 384 KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFL 440
M+ +EPG Y T++D L + + +AL++ K M I P + + +
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 441 T 441
+
Sbjct: 299 S 299
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 25/393 (6%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
LIN Y K + + A+ ++ A T++ +++ L +N+ A E FR+M
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
I PD + I + LG SI +V+ G +V + + + + + GEI+ A+
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 220 KVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
++ DEM + N V++ +I Y G+ A +LF E L+ L + F +++++ C
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 276 GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN---EAPIRNLG 332
+E I G K K G E + V N + G
Sbjct: 743 CRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 333 -----MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
+N M+ + + E +LF +M+N + P IT+ LL G +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM--------PIEPTESVWGAF 439
F GIEP Y+ +++ + G +AL ++ M + + S A
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 440 LTGCRLHGDAELAAFAADRIFELGHVSSGMNVL 472
L+G G+ E+A + + L ++ V+
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 132/338 (39%), Gaps = 50/338 (14%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+ ++++I + QN A+ ++M I PD + S I + R D +S
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE----RNVVSWSGMICAYALL 243
+V+ G + F + + Y + E +A K EM E N V +G+I Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
G+ A ++ + + + + T++ + ++GL
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVL---------------MNGL------------- 602
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGM------WNSMLIACAQHAHTEEVFKLFDRM 357
K ++ A +F E +R G+ + ++ ++ + ++ +FD M
Sbjct: 603 -------FKNDKVDDAEEIFRE--MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
G+ PN I + LL G I+K ++ M G+ P A Y T++D ++G L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 418 QEALDIIKAMPIE---PTESVWGAFLTGCRLHGDAELA 452
EA + M ++ P V+ + GC D E A
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 136/307 (44%), Gaps = 56/307 (18%)
Query: 160 IRPDDHIFPSAIKACAILGR-CDIGKSIHAF--VVKTGFDVDVFVGSSTVDMYGKCGEIK 216
++P+ +I+ S I +L R C + ++ AF +++ G D V ++ +D + K G+I+
Sbjct: 755 LKPNSYIYGSII---GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 217 NARKVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI 272
A K F EM R+ V++++ +I + +G+ A KLF E + L + TF+ +I
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE------A 326
+G C K G ++ A RV N +
Sbjct: 872 ---------------NGYC--------------------KAGHMKDAFRVHNHMIQAGCS 896
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
P N+ + +++ + + +L M +G++PN T+ ++ G I++
Sbjct: 897 P--NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGC 443
+ G + G+ Y T++D ++G++ +A +I+K M ++PT + + G
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Query: 444 RLHGDAE 450
LHG E
Sbjct: 1015 CLHGMLE 1021
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 45/308 (14%)
Query: 129 ATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKA-CAILGRCDIGKSIH 187
++++I + A ++F +M +I PD + + I C I + GK H
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
K G + D + ++ Y K G +K+A +V + M + NVV+++ +I
Sbjct: 854 EMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
G+ ++A +L E L N FT++S++ +GLC
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIV---------------NGLC------------ 945
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKN 359
K G IE A ++ E L + +++ A + ++ ++ M
Sbjct: 946 --------KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G++P +TF L+ G+++ G++ M GI P A + ++V L+
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 420 ALDIIKAM 427
A I K M
Sbjct: 1058 ATAIYKDM 1065
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 136/307 (44%), Gaps = 56/307 (18%)
Query: 160 IRPDDHIFPSAIKACAILGR-CDIGKSIHAF--VVKTGFDVDVFVGSSTVDMYGKCGEIK 216
++P+ +I+ S I +L R C + ++ AF +++ G D V ++ +D + K G+I+
Sbjct: 755 LKPNSYIYGSII---GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 217 NARKVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI 272
A K F EM R+ V++++ +I + +G+ A KLF E + L + TF+ +I
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE------A 326
+G C K G ++ A RV N +
Sbjct: 872 ---------------NGYC--------------------KAGHMKDAFRVHNHMIQAGCS 896
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
P N+ + +++ + + +L M +G++PN T+ ++ G I++
Sbjct: 897 P--NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGC 443
+ G + G+ Y T++D ++G++ +A +I+K M ++PT + + G
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 1014
Query: 444 RLHGDAE 450
LHG E
Sbjct: 1015 CLHGMLE 1021
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 45/308 (14%)
Query: 129 ATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKA-CAILGRCDIGKSIH 187
++++I + A ++F +M +I PD + + I C I + GK H
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
K G + D + ++ Y K G +K+A +V + M + NVV+++ +I
Sbjct: 854 EMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
G+ ++A +L E L N FT++S++ +GLC
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIV---------------NGLC------------ 945
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKN 359
K G IE A ++ E L + +++ A + ++ ++ M
Sbjct: 946 --------KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G++P +TF L+ G+++ G++ M GI P A + ++V L+
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 420 ALDIIKAM 427
A I K M
Sbjct: 1058 ATAIYKDM 1065
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 140/336 (41%), Gaps = 51/336 (15%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
+ E + T++++IS QN +P A+E+F +M PD+ + I A G
Sbjct: 200 EMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAG 259
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWS 234
D+ S++ + +D S+ + +YG G +++EM + N+V ++
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I + A ++K+ + + N T+++++R GR +G
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA--------YGRARYG----- 366
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHTEEV 350
+ A ++ E + L + +N++L CA + + +E
Sbjct: 367 ----------------------DDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 351 FKLFDRMKNVGM-RPNFITF--LCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
F++F MKN P+ TF L +YACS G + + + M++ G EP ++
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACS--GRVSEAEAALLQMREAGFEPTLFVLTSV 462
Query: 408 VDLLGRAGKLQEAL---DIIKAMPIEPTESVWGAFL 440
+ G+A ++ + + D + + I P + G L
Sbjct: 463 IQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLL 498
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 327 PIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQ 386
P R + ++N + + E+ KLFD M G++P+ TF ++ G+ +
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 387 QYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLH 446
++F M +G EP A M+D GRAG + AL + E F T R++
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 447 G 447
G
Sbjct: 291 G 291
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 148/354 (41%), Gaps = 15/354 (4%)
Query: 104 LINFYSKTQLPVFSL----QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
+IN Y + + +F+ +A++ E T+S++++ S A+ +M+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
RPD + I + GR + +V+ GF D ++ K G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 220 KVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
+F +M ERN VV +S +I + G ++AL LF E ++ + + T+SS+I
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 276 GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG--- 332
N + G ++ + + K G + A ++NE R +
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 333 -MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGL 391
+NS++ + E ++FD M + G P+ +T+ L+ + +D G + F
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 392 MKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTG 442
+ G+ P Y T+V ++GKL A ++ + M + P+ +G L G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 138/326 (42%), Gaps = 14/326 (4%)
Query: 117 SLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK 172
+L F E + K T+SS+I L + + R+MI NI PD F + I
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 173 ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ER 228
G+ K ++ ++ G D +S +D + K + A ++FD M E
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
++V++S +I +Y ++ ++LF+E + L N T+++++ S L +++
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAP----IRNLGMWNSMLIACAQH 344
+ G + A +F + +G++N ++
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
+ ++ + LF + + G++P+ +T+ ++ G + + F MK+ G P Y
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 405 ATMVDL-LGRAGKLQEALDIIKAMPI 429
++ LG +G L ++++I+ M +
Sbjct: 564 NILIRAHLGGSG-LISSVELIEEMKV 588
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 150/372 (40%), Gaps = 50/372 (13%)
Query: 119 QAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKAC 174
Q FEE + T+++++ ++ P A++ +M+++ P + S I A
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 175 AILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNV 230
A G D + + + G DVF ++ + + + G++++A +F+EM + N+
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
+++ I Y G+ +K+F E + LS + T+++++ V G + + +
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAA----SRVFNEAPIRNLGMWNSMLIACAQHAH 346
+ + +CG E A R+ + +L +N++L A A+
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYA------------------------------- 375
E+ K+ M++ +PN +T+ LL+A
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 376 ----CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR---AGKLQEALDIIKAMP 428
CS L+ + ++ F +K+ G P +MV + GR K LD +K
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 429 IEPTESVWGAFL 440
P+ + + + +
Sbjct: 660 FTPSMATYNSLM 671
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/392 (18%), Positives = 155/392 (39%), Gaps = 33/392 (8%)
Query: 81 KGQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLA 140
+GQQ+ +I+ + S QL + FE ++K +T S +++ L
Sbjct: 98 QGQQVLRSLIEPNFDS--------------GQLDSVLSELFEPFKDKPESTSSELLAFLK 143
Query: 141 ------QNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTG 194
+ +L A ++F + D+ + I GR ++ + + G
Sbjct: 144 GLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDG 203
Query: 195 FDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDENAL 250
F +DV+ +S + + G + A VF +M E +++++ ++ + +G N +
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 251 KLFKEALLED-LSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXX 309
E + D ++ + +T++++I C +L + Q+ +
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 310 XXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPN 365
K + A +V NE + +NS++ A A+ +E +L ++M G +P+
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 366 FITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI-- 423
T+ LL G ++ F M++ G +P + + + G GK E + I
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 424 -IKAMPIEPTESVWGAFLTGCRLHG-DAELAA 453
I + P W L +G D+E++
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/339 (17%), Positives = 136/339 (40%), Gaps = 12/339 (3%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
TW+++++ QN + S F++M P+ F + I A + G + +++ +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE----RNVVSWSGMICAYALLGED 246
+ G D+ ++ + + G + + KV EM + N +++ ++ AYA E
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
L +E + +++ VC LL + + +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 307 XXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
+ ++ A+ V + R ++ +NS++ ++ A + ++ + G+
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
+P+ I++ ++YA + + F M++ GI P Y T + +EA+
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 423 IIKAM---PIEPTESVWGAFLTG-CRLHGDAELAAFAAD 457
+++ M P ++ + + + G C+L+ E F D
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 149/340 (43%), Gaps = 48/340 (14%)
Query: 118 LQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
L+ E+ + E ++++I +L + + A+ F +M IRP+ + S I+
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVS 232
GR + + +++ + +V S+ +D + K G++ A K++DEM +R ++ +
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
+S +I + + + A +F+ + +D N T++++I+ G C
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK---------------GFC- 406
Query: 293 KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTE 348
K +E +F E R N +N+++ Q +
Sbjct: 407 -------------------KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
K+F +M + G+ P+ IT+ LL G ++K F ++ +EP Y M+
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 409 DLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG-CR 444
+ + +AGK+++ D+ ++ ++P ++ ++G CR
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 142/343 (41%), Gaps = 11/343 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q F + + T++++I L + S A+ +M+ +PD + + + G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ S+ + K + DV + ++ +D + +A +F EM + NVV+++
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + + ++ N TFS++I L +++ +K
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A +F ++ N+ +N+++ + EE
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M G+ N +T+ L+ G D Q+ F M G+ P Y+ ++D
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 411 LGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAE 450
L + GKL++AL + + + +EP + + G G E
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 117 SLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK 172
+L F E K + T++S+I L S A MI I P+ F + I
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 173 ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER---- 228
A G+ + ++ ++K D D+F SS ++ + + A+ +F+ M +
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 229 NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
NVV+++ +I + E ++LF+E L N T++++I+ + ++ ++I
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQH 344
+ K G +E A VF ++ +N M+ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
E+ + LF + G++PN I + ++ GL ++ F MK+ G P + Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 405 ATMVDLLGRAGKLQEALDIIKAM 427
T++ R G + ++IK M
Sbjct: 574 NTLIRARLRDGDKAASAELIKEM 596
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 151/373 (40%), Gaps = 16/373 (4%)
Query: 96 SIPLVSHH-LIN-FYSKTQLPVFSL---QAFEEAQEKSATTWSSVISSLAQNELPSLAIE 150
S L S++ LIN F ++QLP+ + + E T SS+++ + S A+
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 151 YFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYG 210
QM + +P+ F + I + + ++ +V G D+F + V+
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 211 KCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDF 266
K G+I A + +M E +VV ++ +I A +AL LF E + + N
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 267 TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEA 326
T++S+IR N ++ ++ + K G + A ++++E
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 327 PIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
R++ ++S++ H +E +F+ M + PN +T+ L+ +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAF 439
++G + F M G+ Y T++ L +AG A I K M + P +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 440 LTGCRLHGDAELA 452
L G +G E A
Sbjct: 472 LDGLCKYGKLEKA 484
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 142/323 (43%), Gaps = 20/323 (6%)
Query: 122 EEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAIL-GRC 180
E + + T+ V++ + ++ +LA+E R+M NI+ D A+K I+ G C
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD------AVKYSIIIDGLC 274
Query: 181 DIGKSIHAFVVKT-----GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVV 231
G +AF + GF D+ ++ + + G + K+ +M +R NVV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 232 SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLC 291
++S +I ++ G+ A +L KE + ++ N T++S+I LE Q+ L
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 292 LKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHT 347
+ D K I+ +F E +R N +N+++ Q
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
E KLF M + +RP+ +++ LL G ++K + FG ++ +E Y +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 408 VDLLGRAGKLQEALDIIKAMPIE 430
+ + A K+ +A D+ ++P++
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLK 537
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 136/338 (40%), Gaps = 11/338 (3%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
E ++++++ L S A+E +M+ +P + + + G+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV----VSWSGMICAYA 241
+ +V+TGF + +++ K G+ A ++ +M ERN+ V +S +I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
G +NA LF E ++ + T++++I N+ + G ++ +K
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRM 357
K G + A ++ E R + +NS++ + EE ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
+ G P+ +TF L+ ID G + F M G+ Y T+V ++GKL
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 418 QEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAELA 452
+ A + + M + P + L G +G+ E A
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 135/324 (41%), Gaps = 11/324 (3%)
Query: 130 TTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF 189
T+ +VI+ L + P LA+ +M I D I+ + I + D ++
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 190 VVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGE 245
+ G DVF SS + G +A ++ +M ER NVV+++ +I A+A G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
A KLF E + + N T++S+I L+ +QI L +
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 306 XXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
K + +F + R N + +++ Q + + +F +M + G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ PN +T+ LL G ++K F ++ +EP Y M + + +AGK+++
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 422 DIIKAMP---IEPTESVWGAFLTG 442
D+ ++ ++P + ++G
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISG 529
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 137/324 (42%), Gaps = 11/324 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + T+++++ L Q+ S A+ +M++ +PD + + I G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + K + DV + S+ +D K + +A +F EM + +V ++S
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + L ++ N TF+S+I L ++ ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A ++F ++ + ++ +N+++ + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M G+ N +T+ L++ D Q F M G+ P Y T++D
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 411 LGRAGKLQEALDIIKAM---PIEP 431
L + GKL++A+ + + + +EP
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 159/418 (38%), Gaps = 61/418 (14%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQ----EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
+IN K P +L + + E +S+VI SL + A+ F +M
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
IRPD + S I GR + + +++ + +V +S +D + K G++ A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 220 KVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIR-- 273
K+FDEM +R N+V+++ +I + + + A ++F + +D + T++++I
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 274 ------VCGNSTLLELGRQ------------IHGLCLKTSYDXXXXXXXXXXXXXX---- 311
V G ++ R+ IHG + D
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 312 -----------KCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDR 356
K G +E A VF ++ +N M + E+ + LF
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
+ G++P+ I + ++ GL ++ F MK+ G P + Y T++ R G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 417 LQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFELGHVSSGMNVLLS 474
+ ++IK M CR GDA D + + G + G +LS
Sbjct: 571 KAASAELIKEM-------------RSCRFAGDASTYGLVTDMLHD-GRLDKGFLEVLS 614
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 135/326 (41%), Gaps = 38/326 (11%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S +S ++S++A+ + L I + +M I + + + + I + +I
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
++K G+ + +S ++ + I A + D+M E + V+++ ++ + L
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV--HGLF 181
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
++ + + AL+E + V++ C L+ G I+GLC + D
Sbjct: 182 QHNKASEAV---ALVERM---------VVKGC-QPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
G IEA ++ ++++++ + ++ H ++ LF M N G+R
Sbjct: 229 NKMEK-----GKIEA-----------DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ T+ L+ + G + M + I P + +++D + GKL EA +
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 424 IKAM---PIEPTESVWGAFLTGCRLH 446
M I+P + + + G +H
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMH 358
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 137/338 (40%), Gaps = 12/338 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q + + T+ +V++ L + LA+ ++M I D I+ + I
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D ++ + G DVF SS + G +A ++ +M ER NVV++S
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I A+ G+ A KL+ E + + + FT+SS+I L+ + + L +
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEV 350
K +E +F E R N + +++ Q +
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+F +M +VG+ PN +T+ LL G + K F ++ +EP Y M++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 411 LGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG-CR 444
+ +AGK+++ ++ + + P + ++G CR
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 131/315 (41%), Gaps = 44/315 (13%)
Query: 111 TQLPVFSLQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
T L + L E A+ E + +S+VI SL + A+ F +M +RP+ + S
Sbjct: 839 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 898
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER- 228
I GR + + +++ + ++ S+ +D + K G++ A K+++EM +R
Sbjct: 899 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 958
Query: 229 ---NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
N+ ++S +I + +L A ++ + + +D N T++++I
Sbjct: 959 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI------------- 1005
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIAC 341
+G C K ++ +F E R N + +++
Sbjct: 1006 --NGFC--------------------KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 1043
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
Q + +F +M +VG+ PN +T+ LL G + K F ++ +EP
Sbjct: 1044 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 1103
Query: 402 QHYATMVDLLGRAGK 416
Y M++ + +AGK
Sbjct: 1104 YTYNIMIEGMCKAGK 1118
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 135/336 (40%), Gaps = 13/336 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + T++++I L + S A+ +M+ +PD + + + G
Sbjct: 778 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 837
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + + +V + S+ +D K +A +F EM + NV+++S
Sbjct: 838 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 897
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + + ++ N TFS++I L +++ +K
Sbjct: 898 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 957
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR-----NLGMWNSMLIACAQHAHTEE 349
S D + A ++ E IR N+ +N+++ + ++
Sbjct: 958 SIDPNIFTYSSLINGFCMLDRLGEAKQML-ELMIRKDCLPNVVTYNTLINGFCKAKRVDK 1016
Query: 350 VFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVD 409
+LF M G+ N +T+ L++ D Q F M G+ P Y ++D
Sbjct: 1017 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 1076
Query: 410 LLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTG 442
L + GKL +A+ + + + +EP + + G
Sbjct: 1077 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 1112
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 22/354 (6%)
Query: 91 KSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELPS 146
K +++ ++ + +I+ K + +L F E K T+SS+IS L S
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 147 LAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTV 206
A MI I P+ F + I A G+ + ++ ++K D D+F SS +
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 207 DMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLS 262
+ + + A+ +F+ M + NVV++S +I + E ++LF+E L
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 263 VNDFTFSSVI------RVCGNSTLL---ELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKC 313
N T++++I R C N+ ++ + +H L +Y+
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL--TYNILLDGLCKNGKLAKAM 488
Query: 314 GVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLL 373
V E R E I +N M+ + E+ ++LF + G+ PN I + ++
Sbjct: 489 VVFEYLQRSTMEPDIYT---YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 374 YACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
G ++ MK+ G P + Y T++ R G + + ++IK M
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 135/342 (39%), Gaps = 42/342 (12%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S ++ ++S++A+ L I QM I D + + I + + ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
A ++K G++ D+ SS ++ Y I +A + D+M E + +++ +I L
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
+ A+ L + V R C L+ G ++GLC + D
Sbjct: 202 NKASEAVALVDQM--------------VQRGC-QPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
G IEA ++ ++N+++ ++ H ++ LF M N G+R
Sbjct: 247 KKMEK-----GKIEA-----------DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ T+ L+ + G + M + I P ++ ++D + GKL EA +
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 424 IKAM---PIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL 462
M I+P + + + G +H + A +FEL
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFEL 388
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/371 (19%), Positives = 141/371 (38%), Gaps = 46/371 (12%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAI----------KACA 175
E T SS+++ ++ S A+ QM+ +PD F + I +A A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 176 IL-------------------------GRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYG 210
++ G D+ S+ + K + DV + ++ +D
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 211 KCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDF 266
K + +A +F EM + +V ++S +I G +A +L + + ++ N
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 267 TFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVF--- 323
TFS++I L +++ +K S D ++ A +F
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 324 -NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLI 382
++ N+ +++++ + EE +LF M G+ N +T+ L++
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 383 DKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAF 439
D Q F M G+ P Y ++D L + GKL +A+ + + + +EP +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 440 LTGCRLHGDAE 450
+ G G E
Sbjct: 510 IEGMCKAGKVE 520
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 132/322 (40%), Gaps = 38/322 (11%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S +S ++S++A+ L I + +M I I + + + I R + ++
Sbjct: 682 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 741
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
++K G++ D+ +S ++ + I +A + D+M E + V+++ +I L
Sbjct: 742 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 801
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
+ A+ L V R C L+ G ++GLC + D
Sbjct: 802 NKASEAVALIDRM--------------VQRGC-QPDLVTYGAVVNGLCKRGDTDLALNLL 846
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
+ IEA N+ ++++++ + ++ H ++ LF M+N G+R
Sbjct: 847 NKM-----EAAKIEA-----------NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 890
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
PN IT+ L+ + G + M + I P ++ ++D + GKL +A +
Sbjct: 891 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 950
Query: 424 IKAM---PIEPTESVWGAFLTG 442
+ M I+P + + + G
Sbjct: 951 YEEMIKRSIDPNIFTYSSLING 972
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 156/365 (42%), Gaps = 29/365 (7%)
Query: 121 FEEAQEKSAT----TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
F+E ++++ T+S++I+S + + A+ + ++M D + D ++ + I+
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 177 LGRCDIGKSIHAF--VVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NV 230
L CD K+I F + ++G D+ +S +++YGK + AR + EM E N
Sbjct: 238 L--CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNT 295
Query: 231 VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGL 290
VS+S ++ Y + AL +F E + +++ T + +I V G +++ ++
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 291 CLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN----EAPIRNLGMWNSMLIACAQHAH 346
K + + + A +F + +N+ +N+M+ +
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTME 415
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
E+ L M++ G+ PN IT+ ++ G +D+ F ++ G+E Y T
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 407 M------VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF 460
M V L+G A +L L + +P E ++ G E A + + F
Sbjct: 476 MIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK-------AGRTEEATWVFRQAF 528
Query: 461 ELGHV 465
E G V
Sbjct: 529 ESGEV 533
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
+ + T++ +I S + + A+ F QM +PD + + I A G DI
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYA 241
++ + G D F S ++ GK G + A K+F EM ++ N+V+++ M+ +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
+NALKL+++ + T+S V+ V G+ LE + + ++
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 302 XXXXXXXXXXKCGVIEAASRVFN---EAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRM 357
K G +E A + + A +R N+ NS+L + E ++L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 358 KNVGMRPNFITFLCLLYACSHG 379
+G+RP+ T+ LL C+ G
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDG 657
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 8/244 (3%)
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDE 247
+ GF D ++ V G+ + K+ DEM + N V+++ +I +Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
A+ +F + + T+ ++I + + L++ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 308 XXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
K G + AA ++F ++ NL +N M+ A+ + + KL+ M+N G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ +T+ ++ H G +++ + F M+ P Y +VDL G+AG +++A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 424 IKAM 427
+AM
Sbjct: 597 YQAM 600
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
+ + T++ +I S + + A+ F QM +PD + + I A G DI
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYA 241
++ + G D F S ++ GK G + A K+F EM ++ N+V+++ M+ +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
+NALKL+++ + T+S V+ V G+ LE + + ++
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 302 XXXXXXXXXXKCGVIEAASRVFN---EAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRM 357
K G +E A + + A +R N+ NS+L + E ++L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 358 KNVGMRPNFITFLCLLYACSHG 379
+G+RP+ T+ LL C+ G
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDG 657
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 8/244 (3%)
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDE 247
+ GF D ++ V G+ + K+ DEM + N V+++ +I +Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
A+ +F + + T+ ++I + + L++ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 308 XXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
K G + AA ++F ++ NL +N M+ A+ + + KL+ M+N G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ +T+ ++ H G +++ + F M+ P Y +VDL G+AG +++A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 424 IKAM 427
+AM
Sbjct: 597 YQAM 600
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 117/238 (49%), Gaps = 19/238 (7%)
Query: 202 GSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEAL 257
+ + +YGK G +NA+KVF+EMP +R+V+S++ ++ AY L + + +LF E L
Sbjct: 112 AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNE-L 170
Query: 258 LEDLSVND--FTFSSVIR-VCGNSTLLE---LGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
LS+ +++++I+ +C +L E L +I LK
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-- 228
Query: 312 KCGVIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
G E ++ + +N+ + +N+ L+ A A ++E+ LF +K G++P+
Sbjct: 229 --GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVF 286
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIK 425
+F ++ + G +D+ + ++ + +G P +A ++ + +AG + A+++ K
Sbjct: 287 SFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 152/376 (40%), Gaps = 49/376 (13%)
Query: 132 WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV 191
++++++SLA+ L + + +M+ D + P+ + + + LG + + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMI---CA----- 239
+ G D D F +S + Y + ++ +A KVF+EMP RN V+++ +I C
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 240 -----YALLGEDE----------------------NALKLFKEALLEDLSVNDFTFSSVI 272
+ + +DE AL L KE + N T++ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 273 RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG 332
+ E R++ G L+ K G+IE A V R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 333 ----MWNSMLIA-CAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQ 387
+N ++ C + H + + ++M + P+ +T+ L+ G D +
Sbjct: 426 PNTRTYNELIKGYCKSNVH--KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 388 YFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTGCR 444
LM D G+ P Y +M+D L ++ +++EA D+ ++ + P ++ A + G
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 445 LHGDAELAAFAADRIF 460
G + A +++
Sbjct: 544 KAGKVDEAHLMLEKML 559
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 119/301 (39%), Gaps = 44/301 (14%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+ T++ +I SL +E S A+ ++M I+P+ H + I + + + + +
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
+++ G +V ++ ++ Y K G I++A V + M R N +++ +I Y
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
A+ + + L + + T++S+I G C
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLI---------------DGQC------------ 473
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKN 359
+ G ++A R+ + R L + SM+ + + EE LFD ++
Sbjct: 474 --------RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G+ PN + + L+ G +D+ M P + + ++ L GKL+E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 420 A 420
A
Sbjct: 586 A 586
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 14/311 (4%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+ T+ ++I+ + A + F+ M I PD + + I G +G +
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM----PERNVVSWSGMICAYALL 243
+ + G +DV V SST+D+Y K G++ A V+ M NVV+++ +I
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIR---VCGNSTLLELGRQIHGLCLKTSYDXXX 300
G A ++ + L + + T+SS+I CGN L G ++ +K Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN---LRSGFALYEDMIKMGYPPDV 461
Query: 301 XXXXXXXXXXXKCGVIEAASR----VFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDR 356
K G++ A R + ++ N+ ++NS++ + +E K+F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 357 MKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
M G++P+ TF ++ G +++ F M G+EP A Y T++D + K
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 417 LQEALDIIKAM 427
L + M
Sbjct: 582 PTIGLQLFDLM 592
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 141/361 (39%), Gaps = 46/361 (12%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+ T++ +I L Q+ A + Q++ + P + S I G G +++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR----KVFDEMPERNVVSWSGMICAYALL 243
++K G+ DV + VD K G + +A K+ + NVV ++ +I + L
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVC--------------------------GN 277
+ ALK+F+ + + + TF++V+RV
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 278 STLLE---------LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN---E 325
TL++ +G Q+ L + KC IE AS+ FN E
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 326 APIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
+ ++ +N+M+ +E ++F+ +K PN +T L++ +D
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLT 441
+ F +M + G +P A Y ++D ++ ++ + + + M I P+ + +
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 442 G 442
G
Sbjct: 750 G 750
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 143/356 (40%), Gaps = 51/356 (14%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPV----FSLQAFEEAQEKSATTWSSVIS 137
G ++ +IK ++ L++ SK L + FS++ ++ + ++S+I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 138 SLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDV 197
+ A++ FR M I I+PD F + ++ + GR + + + K G +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 198 DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAYAL-----LGEDENALKL 252
D + +D + K + ++FD M +RN +S +C + E+A K
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 253 FKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXK 312
F + + + T++++I CG +L L
Sbjct: 624 FNNLIEGKMEPDIVTYNTMI--CGYCSLRRL----------------------------- 652
Query: 313 CGVIEAASRVFNEAPIRNLGMWNSMLIACAQHA-----HTEEVFKLFDRMKNVGMRPNFI 367
+ A R+F + G N++ + H + ++F M G +PN +
Sbjct: 653 ----DEAERIFELLKVTPFG-PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
T+ CL+ S I+ + F M++ GI P Y+ ++D L + G++ EA +I
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 126/327 (38%), Gaps = 18/327 (5%)
Query: 135 VISSLAQNELPSLAIEYFRQMIIDNIRPDD---HIFPSAIKACAILGRCDIGKSIHAFVV 191
+++SL ++ L ++F ++ I P H F + A G H V+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF--VLDALFCKGEVTKALDFHRLVM 244
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARK----VFDEMPERNVVSWSGMICAYALLGEDE 247
+ GF V + V + V +I+ A + V D P NVV++ +I + GE +
Sbjct: 245 ERGFRVGI-VSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
A LFK + + +S++I + +L +G ++ L
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 308 XXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
K G + AS V+ + N+ + ++ Q E F ++ ++ GM
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ +T+ L+ G + G + M G P Y +VD L + G + A+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 424 IKAM---PIEPTESVWGAFLTG-CRLH 446
M I V+ + + G CRL+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLN 510
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 133/317 (41%), Gaps = 8/317 (2%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E T++++I L + S A+ +M+ +P+ + + G
Sbjct: 104 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + + DV + ++ +D K + +A +F EM + NVV++S
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + + + ++ N TF+++I ++H +K
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A ++F ++ +L +N+++ + E+
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M + G+ + +T+ L+ H G D Q+ F M G+ P Y+ ++D
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 411 LGRAGKLQEALDIIKAM 427
L GKL++AL++ M
Sbjct: 404 LCNNGKLEKALEVFDYM 420
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 143/337 (42%), Gaps = 47/337 (13%)
Query: 118 LQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
L E A+ E ++++I SL + A+ F++M IRP+ + S I
Sbjct: 172 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 231
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVS 232
GR + + +++ + ++ ++ +D + K G+ A K+ D+M +R ++ +
Sbjct: 232 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 291
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
++ +I + + + A ++F+ + +D + T++++I+ G C
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK---------------GFC- 335
Query: 293 KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTE 348
K +E + +F E R L + +++ +
Sbjct: 336 -------------------KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
K+F +M + G+ P+ +T+ LL + G ++K + F M+ I+ Y TM+
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 409 DLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG 442
+ + +AGK+ + D+ ++ ++P + ++G
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/357 (18%), Positives = 148/357 (41%), Gaps = 25/357 (7%)
Query: 117 SLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK 172
+L F+E + K + T+SS+IS L S A + MI I P+ F + I
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 173 ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVV- 231
A G+ + +H ++K D D+F +S ++ + + A+++F+ M ++
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 232 ---SWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
+++ +I + E+ +LF+E L + T++++I+ + + +++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN---EAPIR-NLGMWNSMLIACAQH 344
+ G +E A VF+ ++ I+ ++ ++ +M+ +
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
++ + LF + G++PN +T+ ++ L+ + MK+ G P + Y
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
T++ R G + ++I+ M CR GDA A+ + +
Sbjct: 503 NTLIRAHLRDGDKAASAELIREM-------------RSCRFVGDASTIGLVANMLHD 546
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 104/244 (42%), Gaps = 8/244 (3%)
Query: 192 KTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDE 247
+ GF D ++ V G+ + K+ DEM + N V+++ +I +Y +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 248 NALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXX 307
A+ +F + + T+ ++I + + L++ ++ +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 308 XXXXKCGVIEAASRVFNE----APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMR 363
K G + AA R+F E NL +N M+ A+ + E KL+ M+N G +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 364 PNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI 423
P+ +T+ ++ H G +++ + F M+ P Y +VDL G+AG + +A
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 424 IKAM 427
+AM
Sbjct: 592 YQAM 595
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 8/260 (3%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
+ + T++ +I S + A+ F QM PD + + I A G DI
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYA 241
++ + + G D F S ++ GK G + A ++F EM + N+V+++ MI +A
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
E ALKL+++ + T+S V+ V G+ LE + + ++
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 302 XXXXXXXXXXKCGVIEAASRVFN---EAPIR-NLGMWNSMLIACAQHAHTEEVFKLFDRM 357
K G ++ A + + +A +R N+ NS+L + E + L M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 358 KNVGMRPNFITFLCLLYACS 377
+G+ P+ T+ LL C+
Sbjct: 631 LALGLHPSLQTYTLLLSCCT 650
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 146/355 (41%), Gaps = 46/355 (12%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIID 158
L+ H++ + + VF + + + T S+++ L + LA+E F M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
IRPD +I+ I++ L K + A + TG DV++ + +D K ++ A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 219 RKVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRV 274
+ ++ ++ VV++ ++ + E E L++ E L S ++ SS++
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV-- 339
Query: 275 CGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA----SRVFNEAPIRN 330
GL K G IE A RV + N
Sbjct: 340 -------------EGL--------------------RKRGKIEEALNLVKRVVDFGVSPN 366
Query: 331 LGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG 390
L ++N+++ + + E LFDRM +G+RPN +T+ L+ G +D + G
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 391 LMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTG 442
M D G++ Y ++++ + G + A + M +EPT + + + G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 130/340 (38%), Gaps = 46/340 (13%)
Query: 129 ATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHA 188
T+ +++ L + + + +E +M+ P + S ++ G+ + ++
Sbjct: 297 VVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK 356
Query: 189 FVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPE----RNVVSWSGMICAYALLG 244
VV G ++FV ++ +D K + A +FD M + N V++S +I + G
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 245 EDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXX 304
+ + AL E + L ++ + ++S+I +G C
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLI---------------NGHC------------- 448
Query: 305 XXXXXXXKCGVIEAA----SRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNV 360
K G I AA + + N+ + + S++ + +L+ M
Sbjct: 449 -------KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 361 GMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA 420
G+ P+ TF LL GLI + F M ++ ++P Y M++ G + +A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 421 LDIIKAMP---IEPTESVWGAFLTGCRLHGDAELAAFAAD 457
+ +K M I P + + G L G A A D
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 18/277 (6%)
Query: 197 VDVFVGSSTVDMYGKCGEIKNARKVFDEM----PERNVVSWSGMICAYALLGED-ENALK 251
+DV ++ + Y + G+ + A +F+ M P +V+++ ++ + +G L
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 252 LFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXX 311
+ E + L ++FT S+V+ C LL ++ Y+
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 312 KCGVIEAASRVF-----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNF 366
K GV A V N P ++ +N ++ A + ++E + + M G+ PN
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSV-TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 367 ITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDII-- 424
IT+ ++ A G D+ + F MK+ G P Y ++ LLG+ + E + ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 425 -KAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIF 460
K+ P + W L C G+ + F +R+F
Sbjct: 447 MKSNGCSPNRATWNTMLALC---GNKGMDKF-VNRVF 479
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 117/302 (38%), Gaps = 38/302 (12%)
Query: 154 QMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCG 213
+M ++ D+ + + ACA G K A + G++ ++ + ++GK G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 214 EIKNARKVFDEMPERNV----VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFS 269
A V EM E + V+++ ++ AY G + A + + + + N T++
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 270 SVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR 329
+VI G + G++ L L S + EA +
Sbjct: 391 TVIDAYGKA-----GKEDEALKLFYS-------------------MKEAGC-------VP 419
Query: 330 NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYF 389
N +N++L + + + E+ K+ MK+ G PN T+ +L C + G+ + F
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 390 GLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTGCRLH 446
MK G EP + T++ GR G +A + M + + A L
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 447 GD 448
GD
Sbjct: 540 GD 541
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 144/362 (39%), Gaps = 31/362 (8%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
+I+ Y K +L+ F +E + T+++V+S L + + I+ M +
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
P+ + + + C G + + GF+ D ++ + YG+CG +A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 511
Query: 220 KVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDF----TFSSV 271
K++ EM V +++ ++ A A G+ + E ++ D+ F T S+
Sbjct: 512 KMYGEMTRAGFNACVTTYNALLNALARKGDWRSG-----ENVISDMKSKGFKPTETSYSL 566
Query: 272 IRVC----GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN--- 324
+ C GN +E +I + KC + + R F
Sbjct: 567 MLQCYAKGGNYLGIE---RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK 623
Query: 325 -EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLID 383
++ ++NSML ++ ++ + + ++ G+ P+ +T+ L+ G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 384 KGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFL 440
K ++ ++ ++P Y T++ R G +QEA+ ++ M I P + F+
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 441 TG 442
+G
Sbjct: 744 SG 745
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 115/305 (37%), Gaps = 57/305 (18%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
E T+++++ + + + A+ ++M ++ D + + A G
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVSWSGMICAY----A 241
+ + K G + ++ +D YGK G+ A K+F M E V + C Y +
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT---CTYNAVLS 429
Query: 242 LLGEDENALKLFKEALLEDL-----SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
LLG+ + ++ K +L D+ S N T+++++ +CGN
Sbjct: 430 LLGKKSRSNEMIK--MLCDMKSNGCSPNRATWNTMLALCGNK------------------ 469
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVFNE------APIRNLGMWNSMLIACAQHAHTEEV 350
G+ + +RVF E P R+ +N+++ A + +
Sbjct: 470 -----------------GMDKFVNRVFREMKSCGFEPDRD--TFNTLISAYGRCGSEVDA 510
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
K++ M G T+ LL A + G G+ MK G +P Y+ M+
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 411 LGRAG 415
+ G
Sbjct: 571 YAKGG 575
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 110/272 (40%), Gaps = 49/272 (18%)
Query: 185 SIHAFVVKTGFDV--DVFVGSSTVDMYGKCGEIKNARKVFDEMP-----ERNVVSWSGMI 237
++H + F+V DVF S V+ Y + G + A E E NVV+++ +I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 238 CAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYD 297
YA++G+ E ++ + +S N T++S+I+ G C K
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIK---------------GYCKK---- 309
Query: 298 XXXXXXXXXXXXXXKCGVIEAASRVFN----EAPIRNLGMWNSMLIACAQHAHTEEVFKL 353
G++E A VF + + + M+ ++ + + ++
Sbjct: 310 ----------------GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGR 413
D M +G+R N L+ G + + +Q F M D+ ++P Y T+VD R
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 414 AGKLQEALDIIKAM---PIEPTESVWGAFLTG 442
AG + EAL + M + PT + L G
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 312 KCGVIEAASRVFNEAP-----IRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNF 366
K G +E A ++F++ I + + ++ CA + F L D M G+ PN
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 367 ITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKA 426
+T+ L+ G +D+ Q+ + GI P A Y T++D L ++G + EA+ + +
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 427 M 427
M
Sbjct: 851 M 851
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 22/316 (6%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S S ++ +L + ++ S A+ F Q +P + S I G+ + ++
Sbjct: 161 SPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVY 220
Query: 188 AFVVKTGFDV--DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNVVS----WSGMICAYA 241
+ G D D S+ + Y K G +A ++FDEM + + ++ ++ Y
Sbjct: 221 TEMCNEG-DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
+G+ E AL LF+E S +T++ +I+ G + ++ + L+
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 302 XXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMW---------NSMLIACAQ-HAHTEEVF 351
K G +E + VF+E +GMW N+++ A + AH EV
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSE-----MGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Query: 352 KLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLL 411
FD+MK + P+ T+ L+ ++K M + G P Y ++++ L
Sbjct: 395 SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 412 GRAGKLQEALDIIKAM 427
G+A + + A ++ K +
Sbjct: 455 GKAKRYEAANELFKEL 470
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 121/324 (37%), Gaps = 44/324 (13%)
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
A++ F +M P + + IK GR D + +++ G DV ++ ++
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 208 MYGKCGEIKNARKVFDEMP----ERNVVSWSGMICA------------------------ 239
+ GK G ++ VF EM VVS++ +I A
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 240 -----YALLGEDENALKLFKEALL--EDLSVNDF-----TFSSVIRVCGNSTLLELGRQI 287
Y++L + ++ALL E++ F + S+I G + E ++
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQ 343
+ + KCG + A +FNE + G +N+++ +
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 344 HAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQH 403
E L +M+ G R + + +L + G+ + + F +K GI+P
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 404 YATMVDLLGRAGKLQEALDIIKAM 427
Y T++ AG +EA +++ M
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREM 610
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 134/367 (36%), Gaps = 48/367 (13%)
Query: 94 LQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSAT----TWSSVISSLAQNELPSLAI 149
+Q + L+ Y K +L FEE + + T++ +I L + A
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAY 323
Query: 150 EYFRQMIIDNIRPDDHIFPSAIKACAILGRCD---------------------------- 181
+++ M+ D + PD + + +GR +
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 182 IGKSIHAFVVKTGFDV--------DVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV--- 230
H V + FD F S +D Y K ++ A + +EM E+
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 231 -VSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHG 289
++ +I A E A +LFKE +V+ ++ +I+ G L +
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 290 LCLKTSYDXXXXXXXXXXXXXXKCGVIEAAS---RVFNEAPIR-NLGMWNSMLIACAQHA 345
K G+I A+ R E R ++ N +L A+
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 346 HTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYA 405
++F+ +K+ G++P+ +T+ LL +H G+ ++ + MKD G E A Y+
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 406 TMVDLLG 412
+++D +G
Sbjct: 624 SILDAVG 630
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 144/340 (42%), Gaps = 48/340 (14%)
Query: 118 LQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
L E A+ E + +S+VI SL + A+ F +M +RP+ + S I
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVS 232
R + + +++ + +V ++ +D + K G++ A K++DEM +R ++ +
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
+S +I + + + A +F+ + +D N T++++I +G C
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---------------NGFC- 411
Query: 293 KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTE 348
K I+ +F E R N + +++ Q +
Sbjct: 412 -------------------KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
+F +M + G+ PN +T+ LL G ++K F ++ +EP Y M+
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 409 DLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG-CR 444
+ + +AGK+++ D+ ++ ++P ++ ++G CR
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 137/343 (39%), Gaps = 11/343 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E T++++I L + S A+ +M+ +P+ + + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + + +V + S+ +D K +A +F EM + NV+++S
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I +A +L + + ++ N TF+++I L +++ +K
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A +F ++ N+ +N+++ + +E
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M G+ N +T+ L++ D Q F M G+ P Y T++D
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 411 LGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAE 450
L + GKL++A+ + + + +EPT + + G G E
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 126/316 (39%), Gaps = 43/316 (13%)
Query: 158 DNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKN 217
D PD + F + + G I +++ G+D DV+ +S + K GE+K
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 218 ARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIR 273
A +V D+M R N V+++ +I + E A +L + + + + TF+S+I+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 274 -VC---GNSTLLELGRQ----------------IHGLCLKTSYDXXXXXXXXXXXXXXKC 313
+C + +EL + I LC K D
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 314 GVI---------------EAASRVFNEAPI----RNLGMWNSMLIACAQHAHTEEVFKLF 354
VI A +F+E + RN +N+++ + E+ +L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 355 DRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRA 414
D+M G +P+ T+ LL GG I K M G EP Y T++ L +A
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 415 GKLQEALDIIKAMPIE 430
G+++ A +++++ ++
Sbjct: 589 GRVEVASKLLRSIQMK 604
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 13/239 (5%)
Query: 206 VDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+ + G+ G + +VFDEMP R+V S++ +I AY G E +L+L E +
Sbjct: 148 ISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI 207
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV------ 315
S + T+++VI C L G + GL + ++ C +
Sbjct: 208 SPSILTYNTVINACARGGLDWEG--LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 316 IEAASRVFNEAPI-RNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLY 374
E R N+ I +L ++ ++ + E+V L M + G P+ ++ LL
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLE 325
Query: 375 ACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIEPTE 433
A + G I + F M+ G P A Y+ +++L G++G+ + + M T+
Sbjct: 326 AYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 151/389 (38%), Gaps = 51/389 (13%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELP-SLAIEYFRQMIID 158
LIN Y + SL+ + + + S T+++VI++ A+ L + F +M +
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 159 NIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNA 218
I+PD + + + ACAI G D + + + G D+ S V+ +GK ++
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 219 RKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRV 274
+ EM ++ S++ ++ AYA G + A+ +F + + N T+S ++ +
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 275 CGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRN---- 330
G S + RQ+ ++ D + G + +F++ N
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 331 LGMWNSMLIACA-----------------------------------QHAHTEEVFKLFD 355
+ + ++ AC Q A EE F+
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 356 RMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAG 415
M VG P+ TF LLY+ + GGL+ + + + D GI + ++ + G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 416 KLQEALDIIKAMP---IEPTESVWGAFLT 441
K +EA+ M +P E A L+
Sbjct: 542 KFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 147/357 (41%), Gaps = 53/357 (14%)
Query: 104 LINFYSKTQLPVFSLQAFEEAQ----EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDN 159
+IN K P +L + + E ++++I L + + A + F +M
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
I+PD + I GR + + +++ + D+ ++ +D + K G++ A
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 220 KVFDEMPER-----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVI-- 272
K++DEM + +VV+++ +I + E +++F+E L N T++++I
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 273 ----RVCGNSTLL---ELGRQIH-----------GLCLKTSYDXXXXXXXXXXXXXXKCG 314
R C N+ ++ + +H GLC G
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC--------------------NNG 440
Query: 315 VIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFL 370
+E A VF R++ + + +M+ A + E+ + LF + G++PN +T+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 371 CLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
++ GL ++ F MK+ G P + Y T++ R G + ++IK M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 146/341 (42%), Gaps = 17/341 (4%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + T+++++ L Q+ S A+ +M++ +PD + + I G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 229
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + K + DV + ++ +D K + +A +F++M + +V +++
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + L ++++ + F+++I L +++ +K+
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 295 SY---DXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHT 347
+ D K +E VF E R N + +++ Q
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYK--RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 348 EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
+ +F +M + G+ P+ +T+ LL + G ++ F M+ ++ Y TM
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 408 VDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG-CR 444
++ L +AGK+++ D+ ++ ++P + ++G CR
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 135/325 (41%), Gaps = 17/325 (5%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
+ + T++++I L +N + A+E F QM + RP+ + + + +GR
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMI---C 238
+ ++K + +V ++ +D + K G++ A+++++ M + +V ++ +I C
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 239 AYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDX 298
Y LL E L + N+ ++++I S +E G +I +
Sbjct: 305 MYGLLDEARQMFYLMER---NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLF 354
G + A VFN+ R ++ +N +L + E+ +F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 355 DRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRA 414
+ M+ M N +T+ ++ G ++ F + G++P Y TM+ R
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 415 GKLQEALDIIKAMPIE---PTESVW 436
G + EA + K M + P ESV+
Sbjct: 482 GLIHEADSLFKKMKEDGFLPNESVY 506
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 125/305 (40%), Gaps = 8/305 (2%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
T + V+ + + P A + +M+ PD F S + R + ++ +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM----PERNVVSWSGMICAYALLGED 246
+ GF +V ++ + K + +A ++F++M NVV+++ ++ +G
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
+A L ++ + + N TF+++I L ++++ + ++ S
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 307 XXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
G+++ A ++F N ++ +++ + E+ K+F M G+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
N IT+ L+ G D Q+ F M P + Y ++D L GK+++AL
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 423 IIKAM 427
I + M
Sbjct: 420 IFEYM 424
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 133/317 (41%), Gaps = 8/317 (2%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E T++++I L + S A+ +M+ +P+ + + G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + + DV + ++ +D K + +A +F EM + NVV++S
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + + + ++ N TF+++I +++ +K
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A ++F ++ ++ +N+++ + E+
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M + G+ + +T+ L+ H G D Q+ F M G+ P Y+ ++D
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 411 LGRAGKLQEALDIIKAM 427
L GKL++AL++ M
Sbjct: 480 LCNNGKLEKALEVFDYM 496
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/344 (18%), Positives = 147/344 (42%), Gaps = 47/344 (13%)
Query: 111 TQLPVFSLQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPS 169
T L + L E A+ E ++++I SL + A+ F++M IRP+ + S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 170 AIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER- 228
I GR + + +++ + ++ ++ +D + K G+ A K++D+M +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 229 ---NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGR 285
++ +++ ++ + + + A ++F+ + +D + T++++I+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK------------ 408
Query: 286 QIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG----MWNSMLIAC 341
G C K +E + +F E R L + +++
Sbjct: 409 ---GFC--------------------KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGA 401
+ K+F +M + G+ P+ +T+ LL + G ++K + F M+ I+
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 402 QHYATMVDLLGRAGKLQEALDIIKAMP---IEPTESVWGAFLTG 442
Y TM++ + +AGK+ + D+ ++ ++P + ++G
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 150/357 (42%), Gaps = 25/357 (7%)
Query: 117 SLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIK 172
+L F+E + K + T+SS+IS L S A + MI I P+ F + I
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 173 ACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN--- 229
A G+ + ++ ++K D D+F +S V+ + + A+++F+ M ++
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 230 -VVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIH 288
VV+++ +I + E+ +LF+E L + T++++I+ + + +++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 289 GLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFN---EAPIR-NLGMWNSMLIACAQH 344
+ G +E A VF+ ++ I+ ++ ++ +M+ +
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 345 AHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHY 404
++ + LF + G++PN +T+ ++ L+ + MK+ G P + Y
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 405 ATMVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
T++ R G + ++I+ M CR GDA A+ + +
Sbjct: 579 NTLIRAHLRDGDKAASAELIREM-------------RSCRFVGDASTIGLVANMLHD 622
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 206 VDMYGKCGEIKNARKVFDEMPERN----VVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+++YG+ G +NA+KVFDEMPERN +S++ ++ A + + +FKE L L
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKE-LPGKL 171
Query: 262 SVND--FTFSSVIR-VCGNSTLLE---LGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGV 315
S+ +++++I+ +CG + E L +I LK +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 316 IEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYA 375
+ +R+ + R++ +N+ L+ A +EE+ LFD++K ++P+ TF ++
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 376 CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
G +D+ ++ ++ G P + +++ + +AG L+ A ++ K +
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 147/335 (43%), Gaps = 46/335 (13%)
Query: 118 LQAFEEAQEKS-ATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
L E A+ K+ ++++I SL + +A++ F +M IRP+ + S I
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV----VS 232
GR + + +++ + +V ++ +D + K G++ A K+ +EM +R++ ++
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCL 292
++ +I + + + A ++FK + +D N T++++I +G C
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI---------------NGFC- 409
Query: 293 KTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIR----NLGMWNSMLIACAQHAHTE 348
KC +E +F E R N + +++ Q +
Sbjct: 410 -------------------KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 349 EVFKLFDRMKNVGMRPNFITFLCLLYA-CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATM 407
+F +M + + + +T+ LL+ CS+G L D F ++ +E Y TM
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL-DTALVIFKYLQKSEMELNIFIYNTM 509
Query: 408 VDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTG 442
++ + +AGK+ EA D+ ++ I+P + ++G
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 134/330 (40%), Gaps = 46/330 (13%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
S ++ ++S++A+ L I QM I D + + I + + ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
A ++K G++ D+ SS ++ Y I +A + D+M E + +++ +I L
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
+ A+ L + V R C L+ G ++GLC
Sbjct: 202 NKASEAVALVDQM--------------VQRGC-QPDLVTYGTVVNGLC------------ 234
Query: 304 XXXXXXXXKCGVIEAASRVFNE---APIR-NLGMWNSMLIACAQHAHTEEVFKLFDRMKN 359
K G I+ A + N+ A I+ N+ ++N+++ + ++ H E LF M+
Sbjct: 235 --------KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G+RPN +T+ L+ + G + M + I P + ++D + GKL E
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 420 ALDIIKAM---PIEPTESVWGAFLTGCRLH 446
A + + M I+P + + G +H
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 127/317 (40%), Gaps = 8/317 (2%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + T++++I L + S A+ QM+ +PD + + + G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ ++ + +V + ++ +D K ++ A +F EM + NVV+++
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L L + ++ N TF+++I L ++H ++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A ++F ++ + N+ +N+++ + E+
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M G+ N +T+ ++ G D Q F M + Y+ ++
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 411 LGRAGKLQEALDIIKAM 427
L GKL AL I K +
Sbjct: 478 LCSYGKLDTALVIFKYL 494
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 134/316 (42%), Gaps = 48/316 (15%)
Query: 121 FEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRC 180
E+ + T++++I + + A + +MI +I PD + I + R
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 181 DIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGM 236
D K + F+V ++ ++ ++ + KC +++ ++F EM +R N V+++ +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 237 ICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSY 296
I + G+ ++A +FK+ + + + T+S ++ HGLC SY
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL---------------HGLC---SY 481
Query: 297 DXXXXXXXXXXXXXXKCGVIEAASRVF-----NEAPIRNLGMWNSMLIACAQHAHTEEVF 351
G ++ A +F +E + N+ ++N+M+ + E +
Sbjct: 482 -----------------GKLDTALVIFKYLQKSEMEL-NIFIYNTMIEGMCKAGKVGEAW 523
Query: 352 KLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLL 411
LF ++ ++P+ +T+ ++ L+ + F MK+ G P + Y T++
Sbjct: 524 DLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 412 GRAGKLQEALDIIKAM 427
R + ++IK M
Sbjct: 581 LRDCDRAASAELIKEM 596
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 153/352 (43%), Gaps = 25/352 (7%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQA---FEEAQEKSAT-----TWS 133
Q++ I K SLQ + + LIN Y K V +L + EKS T T+S
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCK----VGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 134 SVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKT 193
++I++L + A F +M + P+D IF + I + G D+ K + ++
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 194 GFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV----VSWSGMICAYALLGEDENA 249
G D+ + ++ V+ + K G++ AR + D M R + ++++ +I + G+ E A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 250 LKLFKEALLEDLSVNDFTFSSVI-RVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXX 308
L++ KE + ++ FS+++ +C +++ R + + L+
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM-LRAGIKPDDVTYTMMMD 493
Query: 309 XXXKCGVIEAASRVFNE----APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRP 364
K G + ++ E + ++ +N +L + + L D M N+G+ P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 365 NFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGK 416
+ IT+ LL H + ++Y + GI Y ++V+ L RA K
Sbjct: 554 DDITYNTLLEG--HHRHANSSKRYIQ-KPEIGIVADLASYKSIVNELDRASK 602
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 53/279 (18%)
Query: 190 VVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERN----VVSWSGMICAYALLGE 245
++ GF ++V+V + ++ + K G I +A+KVFDE+ +R+ VVS++ +I Y +G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
+ +L + + FT+S++ I+ LC + D
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSAL---------------INALCKENKMD-------- 327
Query: 306 XXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEE-----VFKLFDRMKNV 360
A +F+E R L + N ++ H H+ + + + +M +
Sbjct: 328 ------------GAHGLFDEMCKRGL-IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 361 GMRPNFITFLCLLYA-CSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQE 419
G++P+ + + L+ C +G L+ G+++ G+ P Y T++D R G ++
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR-RGLRPDKITYTTLIDGFCRGGDVET 433
Query: 420 ALDIIKAMP---IEPTESVWGAFLTGCRLHG---DAELA 452
AL+I K M IE + A + G G DAE A
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 136/315 (43%), Gaps = 27/315 (8%)
Query: 130 TTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAF 189
+ ++++I + + + + F+QM P H+F + I+ A GR D S+
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 190 VVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPERNV----VSWSGMICAYALLGE 245
+ + D D+ + + +D +GK G++ A K F E+ + V+++ MI
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 246 DENALKLFKEALLEDLSVNDFTFSSVIRVCGNS-------TLLELGRQIHGLCLKTSYDX 298
+ A+++F+ + ++++I G++ +LLE R + +Y+
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN- 347
Query: 299 XXXXXXXXXXXXXKCGVIEAASRVFNE-----APIRNLGMWNSMLIACAQHAHTEEVFKL 353
K G ++ A +VF E AP NL +N ++ + + F+L
Sbjct: 348 ------CILTCLRKMGKVDEALKVFEEMKKDAAP--NLSTYNILIDMLCRAGKLDTAFEL 399
Query: 354 FDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGI-EPGAQHYATMVDLLG 412
D M+ G+ PN T ++ +D+ F M DY + P + +++D LG
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLG 458
Query: 413 RAGKLQEALDIIKAM 427
+ G++ +A + + M
Sbjct: 459 KVGRVDDAYKVYEKM 473
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 47/261 (18%)
Query: 206 VDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEALLEDL 261
+D + KCG++ A ++ +EM E VV++ +I A + + A LF+EA + +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 262 SVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASR 321
+N +SS+I G K G I+ A
Sbjct: 654 ELNVVIYSSLIDGFG-----------------------------------KVGRIDEAYL 678
Query: 322 VFNEAPIR----NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACS 377
+ E + NL WNS+L A + E F MK + PN +T+ L+
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 378 HGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEA---LDIIKAMPIEPTES 434
+K ++ M+ G++P Y TM+ L +AG + EA D KA P +
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Query: 435 VWGAFLTGCRLHGDAELAAFA 455
+ A + G +G+ + AF+
Sbjct: 799 CYNAMIEGLS-NGNRAMDAFS 818
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 36/272 (13%)
Query: 160 IRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNAR 219
RP + + I A + + D+ ++ + + G++ V + ++ + + K G + +A
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 220 KVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVC 275
+ DEM + ++V ++ I ++ +G+ + A K F E L ++ T++S+I V
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV- 282
Query: 276 GNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWN 335
LC D +E + + +N
Sbjct: 283 --------------LCKANRLDE----------------AVEMFEHLEKNRRVPCTYAYN 312
Query: 336 SMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDY 395
+M++ +E + L +R + G P+ I + C+L G +D+ + F MK
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK- 371
Query: 396 GIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
P Y ++D+L RAGKL A ++ +M
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 141/338 (41%), Gaps = 38/338 (11%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
+++ +I + S A+ +M+ P F S + ++ R S+ +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGED 246
VK+G++ +V V ++ +D K GE+ A ++ +EM ++ +VV+++ ++ G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXX 306
+A ++ ++ + ++ + TF+++I V L+ ++++ +++S D
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP-------- 279
Query: 307 XXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNF 366
N +NS++ H + K FD M + G PN
Sbjct: 280 -----------------------NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 367 ITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKA 426
+T+ L+ ++D+G + F M G Y T++ + GKL+ ALDI
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 427 M---PIEPTESVWGAFLTGCRLHGDAELAAFAADRIFE 461
M + P L G ++G+ E A D + E
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 150/355 (42%), Gaps = 54/355 (15%)
Query: 99 LVSHHLINFYSKTQLPVFSLQAFEEAQEK----SATTWSSVISSLAQNELPSLAIEYFRQ 154
++ + +IN K + +L+ F ++K A T++++IS L+ + + A R
Sbjct: 714 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 773
Query: 155 MIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGE 214
M+ I P+ F + I G ++++ +++ +VF +S ++ + G
Sbjct: 774 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 833
Query: 215 IKNARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSS 270
+ +A+ +FD M + +VV+++ +I + E+ +KLF E + L + FT+++
Sbjct: 834 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 893
Query: 271 VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNE----- 325
+I HG C + G + A +VFN
Sbjct: 894 LI---------------HGYC--------------------QAGKLNVAQKVFNRMVDCG 918
Query: 326 -APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDK 384
+P ++ +N +L + E+ + + ++ M + IT+ ++ + +
Sbjct: 919 VSP--DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 976
Query: 385 GQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAMPIE---PTESVW 436
F + G++P A Y TM+ L R G +EA + + M + P+E ++
Sbjct: 977 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1031
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 333 MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM 392
++ +++ +CA+ + +F++F +M N G+ N TF L+ C+ G + K +G++
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 393 KDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM-----PIEPTESVWGAFLTGCRLHG 447
+ ++P + ++ G++G + A D++ M PI+P GA + C G
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 448 DAELAAFAADRIFELG 463
E A I + G
Sbjct: 624 QVERAKEVYQMIHKYG 639
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/303 (17%), Positives = 124/303 (40%), Gaps = 13/303 (4%)
Query: 163 DDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVF 222
D ++ + I +CA G+ D + + +G + ++ + +D + G++ A +
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 223 DEMPERNV----VSWSGMICAYALLGEDENALKLFKEALLED--LSVNDFTFSSVIRVCG 276
+ +NV V ++ +I A G + A + E E + + + ++++ C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 277 NSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLG---M 333
N+ +E ++++ + K K G + A ++ + +++ +
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 334 WNSMLIACAQHAHT-EEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLM 392
+ S LI A HA +E F + K+ G+R I++ L+ AC + K + + +
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 393 KDYGIEPGAQHYATMVDLLGRAGKLQEA---LDIIKAMPIEPTESVWGAFLTGCRLHGDA 449
K + P ++ L +L +A LD IK + ++P + + D
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDF 800
Query: 450 ELA 452
E++
Sbjct: 801 EVS 803
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/289 (17%), Positives = 120/289 (41%), Gaps = 14/289 (4%)
Query: 132 WSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV 191
++++ISS A++ E F QM + + H F + I CA G+ + K+ A+ +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ--VAKAFGAYGI 562
Query: 192 KTGFDV--DVFVGSSTVDMYGKCGEIKNARKVFDEMP------ERNVVSWSGMICAYALL 243
+V D V ++ + G+ G + A V EM + + +S ++ A
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
G+ E A ++++ + ++ + C S + I+ +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHTEEVFKLFDRMKN 359
+++ A + +A + + + ++S++ AC ++ +L++++K+
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMV 408
+ +RP T L+ A G + K +Y +K G++P Y+ ++
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 142/318 (44%), Gaps = 28/318 (8%)
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
AI+ F +M + P + A LG+ D K ++ G VF + +D
Sbjct: 79 AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID 138
Query: 208 MYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
K G+++ AR +F+EM R + V+++ MI + +G ++ + F+E ++D+
Sbjct: 139 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE--MKDMCC 196
Query: 264 --NDFTFSSVIRV-CGNSTL---LELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIE 317
+ T++++I C L LE R++ G LK + K G+++
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN----VVSYSTLVDAFCKEGMMQ 252
Query: 318 AASRVFNEAPIRNLGM------WNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLC 371
A + + +R +G+ + S++ A + + + F+L + M VG+ N +T+
Sbjct: 253 QAIKFY--VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 372 LLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI---IKAMP 428
L+ + + ++ FG M G+ P Y ++ +A + AL++ +K
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 429 IEPTESVWGAFLTG-CRL 445
I+P ++G F+ G C L
Sbjct: 371 IKPDLLLYGTFIWGLCSL 388
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 156/366 (42%), Gaps = 30/366 (8%)
Query: 121 FEEAQ----EKSATTWSSVISSLAQ-NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACA 175
FEE + E T++++I+ + +LP + +E++R+M + ++P+ + + + A
Sbjct: 188 FEEMKDMCCEPDVITYNALINCFCKFGKLP-IGLEFYREMKGNGLKPNVVSYSTLVDAFC 246
Query: 176 ILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEM----PERNVV 231
G + + + G + + +S +D K G + +A ++ +EM E NVV
Sbjct: 247 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 306
Query: 232 SWSGMI---CAYALLGEDENAL-KLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQI 287
+++ +I C + E E K+ ++ +L+ + ++ LEL ++
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 288 HGLCLKTSYDXXXXXXXXXXXXXXKCGV--IEAASRVFNEAP----IRNLGMWNSMLIAC 341
G +K C + IEAA V NE N ++ +++ A
Sbjct: 367 KGRGIKPD------LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 342 AQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFG-LMKDYGIEPG 400
+ + E L D MK + + +TF L+ L+ K YF + D+G++
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480
Query: 401 AQHYATMVDLLGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAELAAFAAD 457
A + M+D L + +++ A + + M + P + + + + G G+ A D
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 540
Query: 458 RIFELG 463
++ E+G
Sbjct: 541 KMAEIG 546
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 137/327 (41%), Gaps = 19/327 (5%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
T++ +I + + A F +M + PD + S I +GR D +
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGED 246
+ DV ++ ++ + K G++ + + EM + NVVS+S ++ A+ G
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVI----RVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
+ A+K + + L N++T++S+I ++ S LG ++ L+ +
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM----LQVGVEWNVVT 307
Query: 303 XXXXXXXXXKCGVIEAASRVFNE----APIRNLGMWNSMLIACAQHAHTEEVFKLFDRMK 358
++ A +F + I NL +N+++ + + + +L + +K
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367
Query: 359 NVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQ 418
G++P+ + + ++ I+ + MK+ GI+ + Y T++D ++G
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427
Query: 419 EA---LDIIKAMPIEPTESVWGAFLTG 442
E LD +K + IE T + + G
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDG 454
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 152/350 (43%), Gaps = 14/350 (4%)
Query: 118 LQAFEEAQ-EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAI 176
L+ E+ + E ++++I +L + + A+ F +M IRP+ + S I+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 177 LGRCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVS 232
GR + + +++ + +V S+ +D + K G++ A K++DEM +R ++ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 233 WSGMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIR-VCGNSTL---LELGRQI- 287
+S +I + + + A +F+ + +D N T++++I+ C + +EL R++
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 288 -HGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAH 346
GL T ++ ++ ++ + ++ ++ +L +
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIV--FKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 347 TEEVFKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYAT 406
E +F+ ++ M P+ T+ ++ G ++ G F + G++P Y T
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 407 MVDLLGRAGKLQEALDIIKAMPIEPTESVWGAFLTGCRLH-GDAELAAFA 455
M+ R G +EA + + M E G + T R H D + AA A
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 139/343 (40%), Gaps = 11/343 (3%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + + T++++I L ++ S A+ +M++ +PD + + G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWS 234
D+ S+ + + + V + ++ +D + +A +F EM + NVV+++
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 235 GMICAYALLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKT 294
+I G +A +L + + ++ N TFS++I L +++ +K
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 295 SYDXXXXXXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEV 350
S D ++ A +F ++ N+ +N+++ + +E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 351 FKLFDRMKNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDL 410
+LF M G+ N +T+ L++ D Q F M G+ P Y+ ++D
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 411 LGRAGKLQEALDIIKAM---PIEPTESVWGAFLTGCRLHGDAE 450
L GK++ AL + + + +EP + + G G E
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/343 (18%), Positives = 130/343 (37%), Gaps = 49/343 (14%)
Query: 148 AIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVVKTGFDVDVFVGSSTVD 207
A+ F M+ P F + A A + + D+ S+ + G +++ S ++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 208 MYGKCGEIKNARKVFDEMP----ERNVVSWSGMICAYALLGEDENALKLFKEALLEDLSV 263
+ + ++ A V +M E ++V+ + ++ + +A+ L + +
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 264 NDFTFSS---------------------VIRVCGNSTLLELGRQIHGLCLKTSYDXXXXX 302
+ FTF++ V++ C L+ G ++GLC + D
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC-QPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 303 XXXXXXXXXKCGVIEAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGM 362
+ GV+ ++N+++ A + + + LF M N G+
Sbjct: 244 LKKMEQGKIEPGVV----------------IYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 363 RPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALD 422
RPN +T+ L+ + G + M + I P ++ ++D + GKL EA
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 423 IIKAM---PIEPTESVWGAFLTGCRLHGDAELAAFAADRIFEL 462
+ M I+P + + + G +H + A +FEL
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFEL 386
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 312 KCGVIEAASRVFNEAPIRNLG----MWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFI 367
K G+ R+ N+ + L WN++L+AC++ + T ++F M + G +P I
Sbjct: 435 KRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVI 494
Query: 368 TFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
++ LL A G L D+ + + M GIEP Y TM +L K ++K M
Sbjct: 495 SYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEM 554
Query: 428 P---IEPTESVWGAFLTGCRLHG 447
IEP+ + A ++GC +G
Sbjct: 555 ASKGIEPSVVTFNAVISGCARNG 577
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 156/390 (40%), Gaps = 52/390 (13%)
Query: 82 GQQIHAHIIKSSLQSIPLVSHHLINFYSKTQLPVFSLQAFEEAQEKSATTWSSVISSLAQ 141
Q + +I + S S L+++ ++++ + +E +I+S Q
Sbjct: 58 AQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYE-----------VIINSYVQ 106
Query: 142 NELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFVV-KTGFDVDVF 200
++ +L+I YF +M+ + P + F + ++G + F K+ +DV+
Sbjct: 107 SQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF--VVGSSSFNQWWSFFNENKSKVVLDVY 164
Query: 201 VGSSTVDMYGKCGEIKNARKVFDEMPE----RNVVSWSGMICAYALLGEDENALKLFKEA 256
+ + GEI+ + + E+ E NVV ++ +I GE E A LF E
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 257 LLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVI 316
L N+ T++ +I + L + G + G
Sbjct: 225 GKLGLVANERTYTVLI-----NGLFKNGVKKQGF-------------------------- 253
Query: 317 EAASRVFNEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCLLYAC 376
E ++ + NL +N ++ + T++ F++FD M+ G+ N +T+ L+
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 377 SHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDI---IKAMPIEPTE 433
+++ + MK GI P Y T++D GKL +AL + +K+ + P+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 434 SVWGAFLTGCRLHGDAELAAFAADRIFELG 463
+ ++G GD AA + E G
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 139/341 (40%), Gaps = 49/341 (14%)
Query: 126 EKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKS 185
E T++S+I+ A+ QM+ I+PD ++ + I + G + S
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 186 IHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYA 241
+ + G DV + +S V+ G ++A + M +R +V++++ +I A+
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 242 LLGEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXX 301
G+ +A +L+ E + ++ N FT++S+I +G C++
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLI---------------NGFCME-------- 295
Query: 302 XXXXXXXXXXKCGVIEAASRVF----NEAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRM 357
G ++ A ++F + ++ + S++ + ++ K+F M
Sbjct: 296 ------------GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 358 KNVGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKL 417
G+ N IT+ L+ G + Q+ F M G+ P + Y ++ L GK+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 418 QEALDIIKAMP------IEPTESVWGAFLTGCRLHGDAELA 452
++AL I + M + P + L G +G E A
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/355 (18%), Positives = 133/355 (37%), Gaps = 46/355 (12%)
Query: 119 QAFEEAQEKSATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILG 178
Q E + ++++I SL +N + A+ F QM IRPD ++ S + G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 179 RCDIGKSIHAFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER---------- 228
R S+ + K DV ++ +D + K G+ +A ++++EM
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 229 -----------------------------NVVSWSGMICAYALLGEDENALKLFKEALLE 259
+VV+++ +I + + ++A+K+F E +
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 260 DLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXXXXXXXXXXKCGVIEAA 319
L+ N T++++I+ G + +++ + G ++ A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 320 SRVFNEAPIR-------NLGMWNSMLIACAQHAHTEEVFKLFDRMKNVGMRPNFITFLCL 372
+F + R N+ +N +L + E+ +F+ M+ M IT+ +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 373 LYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEALDIIKAM 427
+ G + F + G++P Y TM+ L R G EA + + M
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 133/306 (43%), Gaps = 10/306 (3%)
Query: 131 TWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIHAFV 190
T++ VI+ SLA+ +M+ PD S + R S+ +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 191 VKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALLGED 246
V+ G+ D+ ++ +D K + +A F E+ + NVV+++ ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 247 ENALKLFKEALLEDLSVNDFTFSSVIRV-CGNSTLLELGRQIHGLCLKTSYDXXXXXXXX 305
+A +L + + + ++ N T+S+++ N +LE +++ ++ S D
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE-AKELFEEMVRMSIDPDIVTYSS 300
Query: 306 XXXXXXKCGVIEAASRVFN----EAPIRNLGMWNSMLIACAQHAHTEEVFKLFDRMKNVG 361
I+ A+++F+ + + ++ +N+++ + E+ KLF M G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 362 MRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGIEPGAQHYATMVDLLGRAGKLQEAL 421
+ N +T+ L+ G +DK Q++F M +GI P Y ++ L G+L++AL
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 422 DIIKAM 427
I + M
Sbjct: 421 VIFEDM 426
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 116/278 (41%), Gaps = 43/278 (15%)
Query: 128 SATTWSSVISSLAQNELPSLAIEYFRQMIIDNIRPDDHIFPSAIKACAILGRCDIGKSIH 187
+ T+S+++ + +N A E F +M+ +I PD + S I + R D +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 188 AFVVKTGFDVDVFVGSSTVDMYGKCGEIKNARKVFDEMPER----NVVSWSGMICAYALL 243
+V G DV ++ ++ + K +++ K+F EM +R N V+++ +I +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 244 GEDENALKLFKEALLEDLSVNDFTFSSVIRVCGNSTLLELGRQIHGLCLKTSYDXXXXXX 303
G+ + A + F + +S + +T++ + + GLC
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNIL---------------LGGLC------------ 411
Query: 304 XXXXXXXXKCGVIEAASRVFNEAPIRNLGM----WNSMLIACAQHAHTEEVFKLFDRMKN 359
G +E A +F + R + + + +++ + EE + LF +
Sbjct: 412 --------DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 360 VGMRPNFITFLCLLYACSHGGLIDKGQQYFGLMKDYGI 397
G++P+ +T+ ++ GL+ + + + MK G+
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501