Jatropha Genome Database

JcCB0008751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008751.10 - phase: 0 /pseudo/partial
         (189 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   234   2e-62
AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZE...   234   2e-62

>AT5G67030.1 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26753745-26757090 REVERSE
          Length = 667

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/172 (70%), Positives = 134/172 (77%), Gaps = 25/172 (14%)

Query: 17  KQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK------------------------- 51
           K++KS +L A GGI GLVFALA ++K F+VLVF K                         
Sbjct: 77  KKKKSRVLVAGGGIGGLVFALAAKKKGFDVLVFEKDLSAIRGEGKYRGPIQIQSNALAAL 136

Query: 52  EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMTLQ 111
           EAID+EVAE+VMEAGC+TGDRINGLVDG+SGTWYVKFDTFTPAA RGLPVTRVISRMTLQ
Sbjct: 137 EAIDIEVAEQVMEAGCITGDRINGLVDGISGTWYVKFDTFTPAASRGLPVTRVISRMTLQ 196

Query: 112 QILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           QILA AVGEDVIRNESNVV F+D GDKVTV LENGQ +EGDLLVGADGIWSK
Sbjct: 197 QILARAVGEDVIRNESNVVDFEDSGDKVTVVLENGQRYEGDLLVGADGIWSK 248


>AT5G67030.2 | Symbols: ABA1, LOS6, NPQ2, ATABA1, ZEP, IBS3, ATZEP |
           ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase |
           chr5:26754026-26757090 REVERSE
          Length = 610

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/172 (70%), Positives = 134/172 (77%), Gaps = 25/172 (14%)

Query: 17  KQRKSXILSATGGIEGLVFALATRRKDFEVLVFXK------------------------- 51
           K++KS +L A GGI GLVFALA ++K F+VLVF K                         
Sbjct: 77  KKKKSRVLVAGGGIGGLVFALAAKKKGFDVLVFEKDLSAIRGEGKYRGPIQIQSNALAAL 136

Query: 52  EAIDLEVAEEVMEAGCVTGDRINGLVDGVSGTWYVKFDTFTPAAERGLPVTRVISRMTLQ 111
           EAID+EVAE+VMEAGC+TGDRINGLVDG+SGTWYVKFDTFTPAA RGLPVTRVISRMTLQ
Sbjct: 137 EAIDIEVAEQVMEAGCITGDRINGLVDGISGTWYVKFDTFTPAASRGLPVTRVISRMTLQ 196

Query: 112 QILALAVGEDVIRNESNVVSFQDDGDKVTVTLENGQHFEGDLLVGADGIWSK 163
           QILA AVGEDVIRNESNVV F+D GDKVTV LENGQ +EGDLLVGADGIWSK
Sbjct: 197 QILARAVGEDVIRNESNVVDFEDSGDKVTVVLENGQRYEGDLLVGADGIWSK 248