Jatropha Genome Database
- JcCB0008631.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0008631.10 - phase: 0
(446 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8); om... 637 0.0
AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY ACID DESATURASE ... 616 e-177
AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3); om... 526 e-149
AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3); om... 362 e-100
AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2); de... 196 4e-50
AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2); de... 196 4e-50
AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | FAD6 (FATTY ACID DESAT... 115 5e-26
>AT5G05580.1 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8);
omega-3 fatty acid desaturase | chr5:1664331-1666345
FORWARD
Length = 435
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/450 (68%), Positives = 351/450 (78%), Gaps = 20/450 (4%)
Query: 1 MASWVLSECGLKPLPQFFARPRTGAVLRTNSSKPRF-----LQTSKTVTDLRQPFSFGER 55
MAS VLSECG +PLP+F+ + T ++ KP F L+ ++ + R F R
Sbjct: 1 MASSVLSECGFRPLPRFYPKHTTSFA---SNPKPTFKFNPPLKPPSSLLNSRYGFYSKTR 57
Query: 56 SWRVKVSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHCWVK 115
+W + V+ P FDPGAPPPF L+DIRAAIPKHCWVK
Sbjct: 58 NWALNVATPLTTLQSPSEEDTER------------FDPGAPPPFNLADIRAAIPKHCWVK 105
Query: 116 DPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSN 175
+PW SMSYVVRD PLYW AQGTMFWALFVLGHDCGHGSFSN
Sbjct: 106 NPWMSMSYVVRDVAIVFGLAAVAAYFNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSN 165
Query: 176 NPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRK 235
+P+LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE I++NL+ T+
Sbjct: 166 DPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQM 225
Query: 236 LRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGL 295
RFT+PFPMLAYPFYLWNRSPGK GSH+HPDSDLFLP E+KDV+TST CWTAMAALLV L
Sbjct: 226 FRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCL 285
Query: 296 SFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRD 355
+FVMGPIQ+LKLYGIPYW FVMWLDFVTYLHHHGHE+KLPWYRG EWSYLRGGLTTLDRD
Sbjct: 286 NFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRD 345
Query: 356 YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSL 415
YGWINNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYREP+ SGPLP HL+GSL
Sbjct: 346 YGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSL 405
Query: 416 VRSLRKDHYVSDTGDVVYYQTDRQLSGSTS 445
++S+++DH+VSDTGDVVYY+ D +L+G +
Sbjct: 406 IKSMKQDHFVSDTGDVVYYEADPKLNGQRT 435
>AT3G11170.1 | Symbols: FAD7, FADD | FAD7 (FATTY ACID DESATURASE 7);
omega-3 fatty acid desaturase | chr3:3499959-3502126
FORWARD
Length = 446
Score = 616 bits (1588), Expect = e-177, Method: Compositional matrix adjust.
Identities = 306/452 (67%), Positives = 342/452 (75%), Gaps = 17/452 (3%)
Query: 1 MASWVLSECGLKPLPQFFARPRTGAVLRTNSSKPRFLQTSKTVTDLRQPFSFG------- 53
MA+ VLSECG++PLP+ + PR+ + +N++K R +S + P SFG
Sbjct: 1 MANLVLSECGIRPLPRIYTTPRSNFL--SNNNKFRPSLSSSSYKTSSSPLSFGLNSRDGF 58
Query: 54 ERSWRVKVSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHCW 113
R+W + VS P FDPGAPPPF L+DIRAAIPKHCW
Sbjct: 59 TRNWALNVSTPLTTPIFEESPLEEDNKQR--------FDPGAPPPFNLADIRAAIPKHCW 110
Query: 114 VKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSF 173
VK+PWKS+SYVVRD PLYW AQGTMFWALFVLGHDCGHGSF
Sbjct: 111 VKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSF 170
Query: 174 SNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNIT 233
SN+PKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+ EKI+ LD T
Sbjct: 171 SNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPT 230
Query: 234 RKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLV 293
R RFT+P MLAYPFYLW RSPGK GSH+HPDSDLFLP ERKDV+TST CWTAMAALLV
Sbjct: 231 RFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLV 290
Query: 294 GLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLD 353
L+F +GPIQ+LKLYGIPYW VMWLDFVTYLHHHGHE+KLPWYRG EWSYLRGGLTTLD
Sbjct: 291 CLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLD 350
Query: 354 RDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIG 413
RDYG INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYREP+KSGPLP HL+
Sbjct: 351 RDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLE 410
Query: 414 SLVRSLRKDHYVSDTGDVVYYQTDRQLSGSTS 445
L +S+++DHYVSD G+VVYY+ D L G
Sbjct: 411 ILAKSIKEDHYVSDEGEVVYYKADPNLYGEVK 442
>AT2G29980.1 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12781787-12784946
REVERSE
Length = 386
Score = 526 bits (1355), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/356 (70%), Positives = 287/356 (80%)
Query: 91 FDPGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLY 150
FDP A PPFK+ DIRAAIPKHCWVK P +SMSYVVRD PLY
Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLY 85
Query: 151 WAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
WAAQGT+FWA+FVLGHDCGHGSFS+ P LNSVVGH+LHS ILVPYHGWRISHRTHHQNHG
Sbjct: 86 WAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHG 145
Query: 211 HVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLF 270
HVENDESW PLPE++++ L + TR LR+TVP PMLAYP YL RSPGK GSHF+P S LF
Sbjct: 146 HVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLF 205
Query: 271 LPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGH 330
P+ERK + TST CW+ M L+ LSFV GP+ +LK+YG+PY FVMWLD VTYLHHHGH
Sbjct: 206 APSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGH 265
Query: 331 EEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 390
+EKLPWYRG EWSYLRGGLTT+DRDYG NNIHHDIGTHVIHHLFPQIPHYHL++AT+AA
Sbjct: 266 DEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAA 325
Query: 391 KPVLGKYYREPEKSGPLPFHLIGSLVRSLRKDHYVSDTGDVVYYQTDRQLSGSTSE 446
K VLG+YYREP+ SG +P HL+ SLV S++KDHYVSDTGD+V+Y+TD L S+
Sbjct: 326 KHVLGRYYREPKTSGAIPIHLVESLVASIKKDHYVSDTGDIVFYETDPDLYVYASD 381
>AT2G29980.2 | Symbols: FAD3 | FAD3 (FATTY ACID DESATURASE 3);
omega-3 fatty acid desaturase | chr2:12782257-12784946
REVERSE
Length = 288
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/250 (69%), Positives = 195/250 (78%)
Query: 91 FDPGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLY 150
FDP A PPFK+ DIRAAIPKHCWVK P +SMSYVVRD PLY
Sbjct: 26 FDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAVYVDSWFLWPLY 85
Query: 151 WAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
WAAQGT+FWA+FVLGHDCGHGSFS+ P LNSVVGH+LHS ILVPYHGWRISHRTHHQNHG
Sbjct: 86 WAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHG 145
Query: 211 HVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLF 270
HVENDESW PLPE++++ L + TR LR+TVP PMLAYP YL RSPGK GSHF+P S LF
Sbjct: 146 HVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLF 205
Query: 271 LPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGH 330
P+ERK + TST CW+ M L+ LSFV GP+ +LK+YG+PY FVMWLD VTYLHHHGH
Sbjct: 206 APSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGH 265
Query: 331 EEKLPWYRGN 340
+EKLPWYRG
Sbjct: 266 DEKLPWYRGK 275
>AT3G12120.2 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid
desaturase | chr3:3860592-3861743 REVERSE
Length = 383
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 169/324 (52%), Gaps = 20/324 (6%)
Query: 93 PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
P PPF + D++ AIP HC+ + +S SY++ D PL
Sbjct: 25 PCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYL 84
Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
YWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY W+ SHR H
Sbjct: 85 AWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144
Query: 206 HQNHGHVENDESWHPLPEKIF----RNLDN-ITRKLRFTVPFPMLAYPFYLWNRSPGKT- 259
H N G +E DE + P + + L+N + R + TV F +L +P YL G+
Sbjct: 145 HSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPY 203
Query: 260 ---GSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFV 316
HF P++ ++ ER + S A+ L + G ++ LYG+P
Sbjct: 204 DGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVN 263
Query: 317 MWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLF 375
+L +TYL H LP Y +EW +LRG L T+DRDYG +N + H+I THV HHLF
Sbjct: 264 AFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321
Query: 376 PQIPHYHLIEATEAAKPVLGKYYR 399
+PHY+ +EAT+A KP+LG YY+
Sbjct: 322 STMPHYNAMEATKAIKPILGDYYQ 345
>AT3G12120.1 | Symbols: FAD2 | FAD2 (FATTY ACID DESATURASE 2);
delta12-fatty acid dehydrogenase/ omega-6 fatty acid
desaturase | chr3:3860592-3861743 REVERSE
Length = 383
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 169/324 (52%), Gaps = 20/324 (6%)
Query: 93 PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
P PPF + D++ AIP HC+ + +S SY++ D PL
Sbjct: 25 PCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYL 84
Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
YWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY W+ SHR H
Sbjct: 85 AWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRH 144
Query: 206 HQNHGHVENDESWHPLPEKIF----RNLDN-ITRKLRFTVPFPMLAYPFYLWNRSPGKT- 259
H N G +E DE + P + + L+N + R + TV F +L +P YL G+
Sbjct: 145 HSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPY 203
Query: 260 ---GSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFV 316
HF P++ ++ ER + S A+ L + G ++ LYG+P
Sbjct: 204 DGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVN 263
Query: 317 MWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLF 375
+L +TYL H LP Y +EW +LRG L T+DRDYG +N + H+I THV HHLF
Sbjct: 264 AFLVLITYLQH--THPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLF 321
Query: 376 PQIPHYHLIEATEAAKPVLGKYYR 399
+PHY+ +EAT+A KP+LG YY+
Sbjct: 322 STMPHYNAMEATKAIKPILGDYYQ 345
>AT4G30950.1 | Symbols: FAD6, FADC, SFD4 | FAD6 (FATTY ACID
DESATURASE 6); omega-6 fatty acid desaturase |
chr4:15057278-15059673 REVERSE
Length = 448
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 133/307 (43%), Gaps = 18/307 (5%)
Query: 96 PPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQG 155
P L DI +PK + D K++ V+ PL WA G
Sbjct: 102 PENVTLKDIMDTLPKEVFEIDDLKALKSVLISVTSYTLGLFMIAKSPWYLL-PLAWAWTG 160
Query: 156 TMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVEND 215
T FV+GHDC H SFS N + +VG L ++ PY WR H HH + +D
Sbjct: 161 TAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHD 220
Query: 216 ESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNER 275
+W P+P + F + + + + F P W HF+ F +E
Sbjct: 221 TAWQPVPPEEFESSPVMRKAIIFGYG------PIRPWLSIAHWVNWHFNLKK--FRASEV 272
Query: 276 KDVITSTICWTAMAALLVG---LSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEE 332
V S C A + VG + + +G + +K + +P+ G+ W+ T +HH
Sbjct: 273 NRVKISLAC--VFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMSTFTMVHHTA--P 328
Query: 333 KLPWYRGNEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 390
+P+ +EW+ + L T+ DY WI + HDI H+ HH+ P+IP Y+L A E+
Sbjct: 329 HIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIPSYNLRAAHESI 388
Query: 391 KPVLGKY 397
+ GKY
Sbjct: 389 QENWGKY 395