Jatropha Genome Database

JcCB0008321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008321.10 + phase: 0 /pseudo/partial
         (160 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45720.2 | Symbols:  | armadillo/beta-catenin repeat family p...    94   4e-20
AT2G45720.1 | Symbols:  | armadillo/beta-catenin repeat family p...    94   4e-20
AT1G01830.1 | Symbols:  | armadillo/beta-catenin repeat family p...    81   3e-16
AT1G01830.3 | Symbols:  | armadillo/beta-catenin repeat family p...    81   3e-16
AT1G01830.2 | Symbols:  | armadillo/beta-catenin repeat family p...    81   3e-16

>AT2G45720.2 | Symbols:  | armadillo/beta-catenin repeat family
           protein | chr2:18834468-18836129 FORWARD
          Length = 553

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 15/113 (13%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V E+ QNLAEEG  K MIN+++CGIL              T++N+ L+R +IS++ I+
Sbjct: 301 SAVPEVRQNLAEEGIVKVMINILNCGILLGSKEYAAECLQNLTSSNETLRRSVISENGIQ 360

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
             LAYLDGPLPQES V  ++NLV  VS E    +  + SL+HV++ GS+GAQ+
Sbjct: 361 TLLAYLDGPLPQESGVAAIRNLVGSVSVETYFKI--IPSLVHVLKSGSIGAQQ 411


>AT2G45720.1 | Symbols:  | armadillo/beta-catenin repeat family
           protein | chr2:18834468-18836129 FORWARD
          Length = 553

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 15/113 (13%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V E+ QNLAEEG  K MIN+++CGIL              T++N+ L+R +IS++ I+
Sbjct: 301 SAVPEVRQNLAEEGIVKVMINILNCGILLGSKEYAAECLQNLTSSNETLRRSVISENGIQ 360

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
             LAYLDGPLPQES V  ++NLV  VS E    +  + SL+HV++ GS+GAQ+
Sbjct: 361 TLLAYLDGPLPQESGVAAIRNLVGSVSVETYFKI--IPSLVHVLKSGSIGAQQ 411


>AT1G01830.1 | Symbols:  | armadillo/beta-catenin repeat family
           protein | chr1:298717-300441 REVERSE
          Length = 574

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 13/113 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V+E+ Q LAEEG  +  I+L++ GIL              TA +D L+  I+S+  + 
Sbjct: 320 SAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIVSEGGVP 379

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
           + LAYLDGPLPQ+  V  L+NL+  V+ EI  +L  L  L HV++ GSLGAQ+
Sbjct: 380 SLLAYLDGPLPQQPAVTALRNLIPSVNPEIWVALNLLPRLRHVLKSGSLGAQQ 432


>AT1G01830.3 | Symbols:  | armadillo/beta-catenin repeat family
           protein | chr1:298717-300441 REVERSE
          Length = 574

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 13/113 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V+E+ Q LAEEG  +  I+L++ GIL              TA +D L+  I+S+  + 
Sbjct: 320 SAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIVSEGGVP 379

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
           + LAYLDGPLPQ+  V  L+NL+  V+ EI  +L  L  L HV++ GSLGAQ+
Sbjct: 380 SLLAYLDGPLPQQPAVTALRNLIPSVNPEIWVALNLLPRLRHVLKSGSLGAQQ 432


>AT1G01830.2 | Symbols:  | armadillo/beta-catenin repeat family
           protein | chr1:298717-300441 REVERSE
          Length = 574

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 13/113 (11%)

Query: 6   SVVNEITQNLAEEGSGKFMINLVDCGILF-------------TANNDNLKRIIISKDRIR 52
           S V+E+ Q LAEEG  +  I+L++ GIL              TA +D L+  I+S+  + 
Sbjct: 320 SAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALREAIVSEGGVP 379

Query: 53  NPLAYLDGPLPQESVVRTLKNLVILVSAEIMASLGFLSSLIHVIEPGSLGAQK 105
           + LAYLDGPLPQ+  V  L+NL+  V+ EI  +L  L  L HV++ GSLGAQ+
Sbjct: 380 SLLAYLDGPLPQQPAVTALRNLIPSVNPEIWVALNLLPRLRHVLKSGSLGAQQ 432