Jatropha Genome Database
- JcCB0008071.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0008071.10 + phase: 0
(380 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 426 e-119
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 421 e-118
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 377 e-105
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 377 e-105
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 369 e-102
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 261 8e-70
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 203 1e-52
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 202 2e-52
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 199 3e-51
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 193 2e-49
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 157 8e-39
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 147 8e-36
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 145 5e-35
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 142 4e-34
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 140 2e-33
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 139 4e-33
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 137 8e-33
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 137 9e-33
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 137 1e-32
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 137 1e-32
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 128 6e-30
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 128 6e-30
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 127 2e-29
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 126 2e-29
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 125 3e-29
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 116 2e-26
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 110 2e-24
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 110 2e-24
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 108 5e-24
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 95 7e-20
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 86 3e-17
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 84 1e-16
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 65 1e-10
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 64 2e-10
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 62 6e-10
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 62 9e-10
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPON... 53 4e-07
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 51 1e-06
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 51 1e-06
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 51 1e-06
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 51 1e-06
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 51 1e-06
AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID INDUC... 50 2e-06
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 50 3e-06
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 50 3e-06
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 50 3e-06
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/381 (59%), Positives = 271/381 (71%), Gaps = 46/381 (12%)
Query: 1 MSPPLLGVEEEGENNVSLVASSPSIDCISQNGCG-LTERNYLGXXXXXXXXXXXXXXXXK 59
MSP EEE ++NVS+ +SSP+ +CIS+N G L E NYLG +
Sbjct: 1 MSP-----EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAE 55
Query: 60 ETKNNLNLKATELRLGLPGSQSPERETDVSLLSTGKLDEKPLFPLLPLKDGICSSSQKHV 119
+ K ++LKATEL LGLPGSQSP R+T+++LLS KLDEKP FPLLP KD ICSSSQK+
Sbjct: 56 DDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNN 115
Query: 120 VSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGTDTDSLQSLGQGKFPGNSGISAILSS 179
SGNKRGFSDTMD F+E K SVY+EKNW+F A
Sbjct: 116 ASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEA--------------------------- 148
Query: 180 RPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGVSNNSSSVPAAKAQVVGWPPIKSFRK 239
+ QS K+VP+ + + Q+ +NNSSS PAAKAQ+VGWPP++S+RK
Sbjct: 149 --AATQSVTKKDVPQNIPK-----------GQSSTTNNSSSPPAAKAQIVGWPPVRSYRK 195
Query: 240 NTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFT 299
NTLAT+ KN+DEVDG+PG GALF+KVSMDGAPYLRKVDLR+Y+ Y ELS ALEKMF+ FT
Sbjct: 196 NTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFT 255
Query: 300 IGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKI 359
+GQCGS+GA GK+ LSE KL+DLLNG +YVLTYEDKDGDWMLVGDVPWEMFID CK+LKI
Sbjct: 256 LGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKI 315
Query: 360 MKSSDAIGLAPRAMEKSKIKA 380
MK DAIGLAPRAMEKSK++A
Sbjct: 316 MKGCDAIGLAPRAMEKSKMRA 336
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/383 (59%), Positives = 271/383 (70%), Gaps = 48/383 (12%)
Query: 1 MSPPLLGVEEEGENNVSLVASSPSIDCISQNGCG-LTERNYLGXXXXXXXXXXXXXXXXK 59
MSP EEE ++NVS+ +SSP+ +CIS+N G L E NYLG +
Sbjct: 1 MSP-----EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAE 55
Query: 60 ETKNNLNLKATELRLGLPGSQSPERETDVSLLSTGKLDEKPLFPLLPLKDGICSSSQKHV 119
+ K ++LKATEL LGLPGSQSP R+T+++LLS KLDEKP FPLLP KD ICSSSQK+
Sbjct: 56 DDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNN 115
Query: 120 VSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGTDTDSLQSLGQGKFPGNSGISAILSS 179
SGNKRGFSDTMD F+E K SVY+EKNW+F A
Sbjct: 116 ASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEA--------------------------- 148
Query: 180 RPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGVSNNSSSVPAAKAQVVGWPPIKSFRK 239
+ QS K+VP+ + + Q+ +NNSSS PAAKAQ+VGWPP++S+RK
Sbjct: 149 --AATQSVTKKDVPQNIPK-----------GQSSTTNNSSSPPAAKAQIVGWPPVRSYRK 195
Query: 240 NTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFT 299
NTLAT+ KN+DEVDG+PG GALF+KVSMDGAPYLRKVDLR+Y+ Y ELS ALEKMF+ FT
Sbjct: 196 NTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFT 255
Query: 300 IGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKI 359
+GQCGS+GA GK+ LSE KL+DLLNG +YVLTYEDKDGDWMLVGDVPWEMFID CK+LKI
Sbjct: 256 LGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKI 315
Query: 360 MKSSDAIGL--APRAMEKSKIKA 380
MK DAIGL APRAMEKSK++A
Sbjct: 316 MKGCDAIGLAAAPRAMEKSKMRA 338
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/347 (59%), Positives = 242/347 (69%), Gaps = 49/347 (14%)
Query: 35 LTERNYLGXXXXXXXXXXXXXXXXKETKNNLNLKATELRLGLPGSQSPERETDVSLLSTG 94
L ERNYLG K+NLN KATELRLGLP SQSPERETD LLS
Sbjct: 19 LKERNYLGLSDCSSVDSSTIPNVV--GKSNLNFKATELRLGLPESQSPERETDFGLLSPR 76
Query: 95 KLDEKPLFPLLPLKD-GICSSSQKHVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAG 153
DEK LFPLLP KD G ++ K+VVSGNKRGF+DT D FS VKGSV
Sbjct: 77 TPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVR----------- 125
Query: 154 TDTDSLQSLGQGKFPGNSGISAILSSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAG 213
PG GI+ +LS + +K+V K + ++RS A G N
Sbjct: 126 --------------PGG-GINMMLSPK--------VKDVSKSIQEERSHAKGGLN----- 157
Query: 214 VSNNSSSVPAAKAQVVGWPPIKSFRKNTLATS-SKNNDEVDGKPGLGALFIKVSMDGAPY 272
+ PAAKAQVVGWPPI+S+RKNT+A+S SKN DEVDGKPGLG LF+KVSMDGAPY
Sbjct: 158 ------NAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPY 211
Query: 273 LRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTY 332
LRKVDLRTY++YQ+LS ALEKMFSCFT+GQCG HGA G+E++SEIKL+DLL+GSE+VLTY
Sbjct: 212 LRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTY 271
Query: 333 EDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSKIK 379
EDKDGDWMLVGDVPWE+F +TC++LKIMK SD+IGLAP A+EKSK K
Sbjct: 272 EDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/347 (59%), Positives = 242/347 (69%), Gaps = 49/347 (14%)
Query: 35 LTERNYLGXXXXXXXXXXXXXXXXKETKNNLNLKATELRLGLPGSQSPERETDVSLLSTG 94
L ERNYLG K+NLN KATELRLGLP SQSPERETD LLS
Sbjct: 19 LKERNYLGLSDCSSVDSSTIPNVV--GKSNLNFKATELRLGLPESQSPERETDFGLLSPR 76
Query: 95 KLDEKPLFPLLPLKD-GICSSSQKHVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAG 153
DEK LFPLLP KD G ++ K+VVSGNKRGF+DT D FS VKGSV
Sbjct: 77 TPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVR----------- 125
Query: 154 TDTDSLQSLGQGKFPGNSGISAILSSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAG 213
PG GI+ +LS + +K+V K + ++RS A G N
Sbjct: 126 --------------PGG-GINMMLSPK--------VKDVSKSIQEERSHAKGGLN----- 157
Query: 214 VSNNSSSVPAAKAQVVGWPPIKSFRKNTLATS-SKNNDEVDGKPGLGALFIKVSMDGAPY 272
+ PAAKAQVVGWPPI+S+RKNT+A+S SKN DEVDGKPGLG LF+KVSMDGAPY
Sbjct: 158 ------NAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPY 211
Query: 273 LRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTY 332
LRKVDLRTY++YQ+LS ALEKMFSCFT+GQCG HGA G+E++SEIKL+DLL+GSE+VLTY
Sbjct: 212 LRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTY 271
Query: 333 EDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSKIK 379
EDKDGDWMLVGDVPWE+F +TC++LKIMK SD+IGLAP A+EKSK K
Sbjct: 272 EDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/347 (59%), Positives = 240/347 (69%), Gaps = 51/347 (14%)
Query: 35 LTERNYLGXXXXXXXXXXXXXXXXKETKNNLNLKATELRLGLPGSQSPERETDVSLLSTG 94
L ERNYLG K+NLN KATELRLGLP SQSPERETD LLS
Sbjct: 19 LKERNYLGLSDCSSVDSSTIPNVV--GKSNLNFKATELRLGLPESQSPERETDFGLLSPR 76
Query: 95 KLDEKPLFPLLPLKD-GICSSSQKHVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAG 153
DEK LFPLLP KD G ++ K+VVSGNKRGF+DT D FS VKGSV
Sbjct: 77 TPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSGVKGSVR----------- 125
Query: 154 TDTDSLQSLGQGKFPGNSGISAILSSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAG 213
PG GI+ +LS + +K+V K + ++RS A G N
Sbjct: 126 --------------PGG-GINMMLSPK--------VKDVSKSIQEERSHAKGGLN----- 157
Query: 214 VSNNSSSVPAAKAQVVGWPPIKSFRKNTLATS-SKNNDEVDGKPGLGALFIKVSMDGAPY 272
+ PAAKAQVVGWPPI+S+RKNT+A+S SKN DEVDGKPGLG LF+KVSMDGAPY
Sbjct: 158 ------NAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPY 211
Query: 273 LRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTY 332
LRKVDLRTY++YQ+LS ALEKMFSCFT+GQCG HGA G+E++SEIKL+DLL+GSE+VLTY
Sbjct: 212 LRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTY 271
Query: 333 EDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSKIK 379
EDKDGDWMLVGDVPWE+F +TC++LKIMK SD+IGL A+EKSK K
Sbjct: 272 EDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLG--AVEKSKNK 316
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 198/352 (56%), Gaps = 68/352 (19%)
Query: 37 ERNYLGXXXXXXXXXXXXXXXXKETKNN--LNLKATELRLGLPGSQSPERETDVSLLSTG 94
E +Y+G K NN LN KATELRLGLPGS+SPER
Sbjct: 8 EHDYIGLSEFPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPER---------- 57
Query: 95 KLDEKPLFPLLPLKDGICSSSQKHVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGT 154
+D + L L C VSG KR FSD ++ W+F S G+
Sbjct: 58 -VDSR----FLALNKSSCP------VSGAKRVFSDAIN----------DSNKWVF-SPGS 95
Query: 155 DTDSLQSLGQGKFPGNSGISAILSSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGV 214
T + +G G P R SV + K + + + ++ T
Sbjct: 96 TT-ATGDVGSGSGP-----------RTSVVKDGKSTTFTKPAVPVKEKKSSAT------- 136
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSK----NNDEVD-----GKPGLGALFIKV 265
PA+KAQVVGWPPI+SFRKN++A+S NN E + P L++KV
Sbjct: 137 ------APASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKV 190
Query: 266 SMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNG 325
SM+GAPYLRK+DL+TY +Y ELS ALEKMFSCFTIGQ GSHG G++ L+E +L DLL G
Sbjct: 191 SMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRG 250
Query: 326 SEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSK 377
SEYV+TYEDKD DWMLVGDVPWEMFI +CK+L+IMKSS+AIGLAPR MEK +
Sbjct: 251 SEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCR 302
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 125/171 (73%), Gaps = 17/171 (9%)
Query: 222 PAAKAQVVGWPPIKSFRKN-------TLATSSKNNDEVDGKPGLG--------ALFIKVS 266
P AKAQVVGWPP++SFRKN T +++ ND+ G G ++KVS
Sbjct: 65 PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVS 124
Query: 267 MDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGS 326
MDGAPYLRK+DL+ Y TYQ+LS AL KMFS FTIG G G K+ ++E KL DLLNGS
Sbjct: 125 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGS 182
Query: 327 EYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSK 377
+YV TYEDKDGDWMLVGDVPWEMF+D+CKR++IMK S+AIGLAPRA+EK K
Sbjct: 183 DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCK 233
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 122/159 (76%), Gaps = 3/159 (1%)
Query: 220 SVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGAL-FIKVSMDGAPYLRKVDL 278
S P AKAQVVGWPP++++RKN +A E G G + F+KVSMDGAPYLRKVDL
Sbjct: 69 SKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDL 128
Query: 279 RTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGD 338
+ Y++Y++LS AL KMFS FT+G G+ G + ++E K+ DLLN SEYV +YEDKDGD
Sbjct: 129 KMYTSYKDLSDALAKMFSSFTMGSYGAQGM--IDFMNESKVMDLLNSSEYVPSYEDKDGD 186
Query: 339 WMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSK 377
WMLVGDVPW MF+++CKRL+IMK S+AIGLAPRAMEK K
Sbjct: 187 WMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFK 225
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 122/160 (76%), Gaps = 8/160 (5%)
Query: 222 PAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTY 281
P AKAQVVGWPP++S+RKN + + K++ G P A F+KVSMDGAPYLRK+DLR Y
Sbjct: 77 PPAKAQVVGWPPVRSYRKNVMVSCQKSS----GGPEAAA-FVKVSMDGAPYLRKIDLRMY 131
Query: 282 STYQELSCALEKMFSCFTIGQCGSHGAPGK-EKLSEIKLRDLLNGSEYVLTYEDKDGDWM 340
+Y ELS AL MFS FT+G+ G G G + ++E KL DL+N +YV +YEDKDGDWM
Sbjct: 132 KSYDELSNALSNMFSSFTMGKHG--GEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWM 189
Query: 341 LVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEKSKIKA 380
LVGDVPW MF+DTCKRL++MK SDAIGLAPRAMEK K +A
Sbjct: 190 LVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 121/165 (73%), Gaps = 11/165 (6%)
Query: 220 SVPAAKAQVVGWPPIKSFRKNTLA---TSSKNNDEVDGKPGLGAL------FIKVSMDGA 270
S P AKAQVVGWPP++++RKN + TSS + K G +KVSMDGA
Sbjct: 75 SKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGA 134
Query: 271 PYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVL 330
PYLRKVDL+ Y +YQ+LS AL KMFS FT+G G+ G + ++E KL +LLN SEYV
Sbjct: 135 PYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVP 192
Query: 331 TYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPRAMEK 375
+YEDKDGDWMLVGDVPWEMF+++CKRL+IMK S+A+GLAPRAMEK
Sbjct: 193 SYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 102/155 (65%), Gaps = 20/155 (12%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLR 274
S + + P KAQ+VGWPP++S+RKN + S KN E +G+ +++KVSMDGAPYLR
Sbjct: 52 SRKTETSPPRKAQIVGWPPVRSYRKNNIQ-SKKNESEHEGQ----GIYVKVSMDGAPYLR 106
Query: 275 KVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYED 334
K+DL Y Y EL ALE MF F++G E RD GS++V TYED
Sbjct: 107 KIDLSCYKGYSELLKALEVMFK-FSVG--------------EYFERDGYKGSDFVPTYED 151
Query: 335 KDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLA 369
KDGDWML+GDVPWEMFI TCKRL+IMK S+A GL
Sbjct: 152 KDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 95/138 (68%), Gaps = 11/138 (7%)
Query: 220 SVPAAKAQVVGWPPIKSFRKNTLA---TSSKNNDEVDGKPGLGAL------FIKVSMDGA 270
S P AKAQVVGWPP++++RKN + TSS + K G +KVSMDGA
Sbjct: 75 SKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGA 134
Query: 271 PYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVL 330
PYLRKVDL+ Y +YQ+LS AL KMFS FT+G G+ G + ++E KL +LLN SEYV
Sbjct: 135 PYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGM--IDFMNESKLMNLLNSSEYVP 192
Query: 331 TYEDKDGDWMLVGDVPWE 348
+YEDKDGDWMLVGDVPWE
Sbjct: 193 SYEDKDGDWMLVGDVPWE 210
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 94/145 (64%), Gaps = 22/145 (15%)
Query: 225 KAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTY 284
KAQ+VGWPP++S+RKN + T K+ E G ++KVSMDGAPYLRK+DL Y Y
Sbjct: 60 KAQIVGWPPVRSYRKNNVQTK-KSESEGQGN------YVKVSMDGAPYLRKIDLTMYKQY 112
Query: 285 QELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGD 344
EL +LE MF F++G E R+ GS++V TYEDKDGDWMLVGD
Sbjct: 113 PELMKSLENMFK-FSVG--------------EYFEREGYKGSDFVPTYEDKDGDWMLVGD 157
Query: 345 VPWEMFIDTCKRLKIMKSSDAIGLA 369
VPWEMF+ +CKRL+IMK S+ GL
Sbjct: 158 VPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 33/196 (16%)
Query: 190 KEVPKKVLQDRSRAANGTNLNQ--------AGVSNNSSSVPAAKAQVVGWPPIKSFRKNT 241
K + K+ + + ++G+N +Q G + + PAAK+QVVGWPP+ S+RK
Sbjct: 25 KMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEKVNDSPAAKSQVVGWPPVCSYRKKN 84
Query: 242 LATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIG 301
+ K GLG ++KVSMDG PYLRK+DL + Y +L+ AL+K+F IG
Sbjct: 85 SCKEASTT-----KVGLG--YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIG 137
Query: 302 QCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMK 361
+ L+D N EYV YEDKDGDWML GDVPW MF+++CKRL+IMK
Sbjct: 138 ---------------VALKDGDN-CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMK 181
Query: 362 SSDA--IGLAPRAMEK 375
SDA GL PR +++
Sbjct: 182 RSDATGFGLQPRGVDE 197
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 86/153 (56%), Gaps = 31/153 (20%)
Query: 216 NNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRK 275
+ S P K Q+VGWPP++S RKN + S ++KVSMDGAPYLRK
Sbjct: 49 DEEESTPPTKTQIVGWPPVRSSRKNNNSVS----------------YVKVSMDGAPYLRK 92
Query: 276 VDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDK 335
+DL+TY Y EL ALE MF C G GS +V TYEDK
Sbjct: 93 IDLKTYKNYPELLKALENMFKVMIGEYCEREG---------------YKGSGFVPTYEDK 137
Query: 336 DGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGL 368
DGDWMLVGDVPW+MF +CKRL+IMK SDA L
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 106/185 (57%), Gaps = 36/185 (19%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTL----ATSSKNNDE------------------V 252
S+ SS P + +QVVGWPPI S R N+L AT S +E V
Sbjct: 64 SHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKV 123
Query: 253 DGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMF---SCFTIGQCGSHGAP 309
+GK +G FIKV+MDG RKVDL +S+Y+ L+ LE MF + T+G P
Sbjct: 124 NGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKP 181
Query: 310 GKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLA 369
LR L SE+VLTYEDK+GDWMLVGDVPW MFI++ KRL++MK+S+A GLA
Sbjct: 182 ---------LRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
Query: 370 PRAME 374
R E
Sbjct: 233 ARNQE 237
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 100/177 (56%), Gaps = 29/177 (16%)
Query: 194 KKVLQDR--SRAANGTNLNQAGVSNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDE 251
K+VL D S A + N N S S+P K+Q VGWPP+ S+R+ KNN+E
Sbjct: 35 KRVLSDMMTSSALDTENENSVVSSVEDESLPVVKSQAVGWPPVCSYRRK------KNNEE 88
Query: 252 VDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGK 311
G ++KVSMDG PY+RK+DL + ++Y L LE +F C IG GK
Sbjct: 89 ASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGV----AKEGK 140
Query: 312 EKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGL 368
+ EY++ YEDKD DWMLVGDVPW+MF ++CKRL+I+K SDA G
Sbjct: 141 K-------------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGF 184
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 35/185 (18%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTL----ATSSKNNDEVDGKP-------------- 256
S++ + P +QVVGWPPI R N+L A + +E DG+
Sbjct: 57 SSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMK 116
Query: 257 ------GLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPG 310
GLG F+KV+MDG RKVD+R +S+Y+ L+ LE+MF T C
Sbjct: 117 VNPKVQGLG--FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC------- 167
Query: 311 KEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAP 370
+EK+ ++L D S++VLTYEDK+GDWMLVGDVPW MFI++ KRL+IM +S+A GLAP
Sbjct: 168 REKVKPLRLLD--GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
Query: 371 RAMEK 375
R E+
Sbjct: 226 RRQEQ 230
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 107/188 (56%), Gaps = 36/188 (19%)
Query: 212 AGVSNNSSSVPAAKAQVVGWPPIKSFRKNTL----ATSSKNNDE---------------- 251
A ++++ S P +QVVGWPPI S R N+L AT S +E
Sbjct: 60 ADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVT 119
Query: 252 --VDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMF---SCFTIGQCGSH 306
V+GK +G FIKV+MDG RKVDL +S+Y+ L+ LE MF + T+G
Sbjct: 120 KKVNGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQF 177
Query: 307 GAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAI 366
P LR L SE+VLTYEDK+GDWMLVGDVPW MFI++ KRL++MK+S+A
Sbjct: 178 TKP---------LRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN 228
Query: 367 GLAPRAME 374
GLA R E
Sbjct: 229 GLAARNQE 236
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 107/188 (56%), Gaps = 36/188 (19%)
Query: 212 AGVSNNSSSVPAAKAQVVGWPPIKSFRKNTL----ATSSKNNDE---------------- 251
A ++++ S P +QVVGWPPI S R N+L AT S +E
Sbjct: 60 ADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVT 119
Query: 252 --VDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMF---SCFTIGQCGSH 306
V+GK +G FIKV+MDG RKVDL +S+Y+ L+ LE MF + T+G
Sbjct: 120 KKVNGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQF 177
Query: 307 GAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAI 366
P LR L SE+VLTYEDK+GDWMLVGDVPW MFI++ KRL++MK+S+A
Sbjct: 178 TKP---------LRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEAN 228
Query: 367 GLAPRAME 374
GLA R E
Sbjct: 229 GLAARNQE 236
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 28/178 (15%)
Query: 212 AGVSNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSK---------------NNDEVDGKP 256
AG+ + S+ A QVVGWPPI+++R N++ +K N + D
Sbjct: 73 AGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTK 132
Query: 257 GLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIG----QCGSHGAPGKE 312
++F+KV+MDG P RK+DL + Y+ LS LE+MF +G + H
Sbjct: 133 MRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGH------ 186
Query: 313 KLSEIKLRDLLNGSE-YVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLA 369
E ++ L +GS VLTYEDK+GDWMLVGDVPW MFI + +RL+IMK+S+A G A
Sbjct: 187 --METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 84/142 (59%), Gaps = 30/142 (21%)
Query: 222 PAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRKVDLRTY 281
PA K+QVVGWPP+ S+R+ +K++ ++KVS+DGA +LRK+DL Y
Sbjct: 48 PAKKSQVVGWPPVCSYRRKNSLERTKSS------------YVKVSVDGAAFLRKIDLEMY 95
Query: 282 STYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWML 341
YQ+L+ AL+ +F C+ I D L SE V YEDKDGDWML
Sbjct: 96 KCYQDLASALQILFGCY------------------INFDDTLKESECVPIYEDKDGDWML 137
Query: 342 VGDVPWEMFIDTCKRLKIMKSS 363
GDVPWEMF+ +CKRL+IMK S
Sbjct: 138 AGDVPWEMFLGSCKRLRIMKRS 159
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 99/172 (57%), Gaps = 20/172 (11%)
Query: 212 AGVSNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSK---------------NNDEVDGKP 256
AG+ + S+ A QVVGWPPI+++R N++ +K N + D
Sbjct: 73 AGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTK 132
Query: 257 GLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSE 316
++F+KV+MDG P RK+DL + Y+ LS LE+MF + GS + E
Sbjct: 133 MRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMF---LKPKLGSRTLETDGHM-E 188
Query: 317 IKLRDLLNGSE-YVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIG 367
++ L +GS VLTYEDK+GDWMLVGDVPW MFI + +RL+IMK+S+A G
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%), Gaps = 28/193 (14%)
Query: 194 KKVLQDRSRAANGTNLNQAGVSNNSSSVP------AAKAQVVGWPPIKSFRKNTLATSSK 247
KK +D+S + N N SN ++SVP A VVGWPP++SFRKN +TSS
Sbjct: 66 KKETEDKS--FHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSS 123
Query: 248 N-----------NDEVDGKPGLG----ALFIKVSMDGAPYLRKVDLRTYSTYQELSCALE 292
N DG+ + +F+K++MDG P RKVDL Y++Y++LS ++
Sbjct: 124 KLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVD 183
Query: 293 KMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGS-EYVLTYEDKDGDWMLVGDVPWEMFI 351
K+F Q G+EK + LL+G E+ LTYED +GD MLVGDVPW+MF+
Sbjct: 184 KLFRGLLAAQRDISDGQGEEK----PIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFV 239
Query: 352 DTCKRLKIMKSSD 364
+ KRL+++KSS+
Sbjct: 240 SSVKRLRVIKSSE 252
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 90/151 (59%), Gaps = 29/151 (19%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLR 274
S S+ P AK Q+VGWPP++S RKN + ++KVSMDGAPYLR
Sbjct: 43 STEESAPPPAKTQIVGWPPVRSNRKNNNNKNVS--------------YVKVSMDGAPYLR 88
Query: 275 KVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYED 334
K+DL+ Y Y EL ALE MF FT+G E R+ GS +V TYED
Sbjct: 89 KIDLKMYKNYPELLKALENMFK-FTVG--------------EYSEREGYKGSGFVPTYED 133
Query: 335 KDGDWMLVGDVPWEMFIDTCKRLKIMKSSDA 365
KDGDWMLVGDVPW+MF +C++L+IMK S+A
Sbjct: 134 KDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 83/153 (54%), Gaps = 32/153 (20%)
Query: 216 NNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYLRK 275
NN S Q+VGWPP+ + RK ++KV++DGA YLRK
Sbjct: 59 NNYISSMVTNDQLVGWPPVATARKTVRRK-----------------YVKVALDGAAYLRK 101
Query: 276 VDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDK 335
VDL Y Y +L ALE MF I C ++ +L E+V TYEDK
Sbjct: 102 VDLGMYDCYGQLFTALENMFQGI-ITIC--------------RVTELERKGEFVATYEDK 146
Query: 336 DGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGL 368
DGD MLVGDVPW MF+++CKR+++MK+ DAIGL
Sbjct: 147 DGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 25/171 (14%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKN--------------NDEVDGKPGL-- 258
+ +S A VVGWPP++SFRKN + SS N + D
Sbjct: 84 TKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTE 143
Query: 259 ----GALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKL 314
G +F+K++M G P RKVDL +++Y++LS ++K+F Q + EK
Sbjct: 144 PKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEK- 202
Query: 315 SEIKLRDLLNGS-EYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSD 364
+ LL+G+ EY LTYED +GD MLVGDVPW+MF+ + KRL+++K+S+
Sbjct: 203 ---PITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 29/167 (17%)
Query: 229 VGWPPIKSFRKNTLA-------------------------TSSKNNDEVDGKPGLGALFI 263
VGWPP++++R N+L ++KN+D K ++ +
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 264 KVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTI-GQCGSHGAPGKEKLSEIKLRDL 322
KV+MDG RKVDL +Y L L+ MF F I G + + E L
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMF--FQIPSPVTRSNTQGYKTIKETCTSKL 212
Query: 323 LNGS-EYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGL 368
L+GS EY++TY+DKDGDWMLVGDVPW+MF+ + RL+IMK+S G+
Sbjct: 213 LDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 26/158 (16%)
Query: 214 VSNNSSSVPAAKAQVVGWPPIKSFRKNTLATSSKNNDEVDGKPGLGALFIKVSMDGAPYL 273
+SNN V A VVGWPP++S R+N L K + L++K++M+G P
Sbjct: 39 LSNNRVEV----APVVGWPPVRSSRRN-LTAQLKEEMKKKESDEEKELYVKINMEGVPIG 93
Query: 274 RKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYE 333
RKV+L Y+ YQ+LS A++++FS K+ DL +Y L YE
Sbjct: 94 RKVNLSAYNNYQQLSHAVDQLFS-------------KKDSW------DL--NRQYTLVYE 132
Query: 334 DKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAPR 371
D +GD +LVGDVPWEMF+ T KRL ++K+S A L+PR
Sbjct: 133 DTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 29/145 (20%)
Query: 219 SSVPAAKAQVVGWPPIKSFRKNTLATSS--KNNDEVDGKPGLGALFIKVSMDGAPYLRKV 276
S+ P +A+ WPPIKS ++TL + D+ +LF+KV M+G P RK+
Sbjct: 37 STSPQREARQ-DWPPIKSRLRDTLKGRRLLRRGDDT-------SLFVKVYMEGVPIGRKL 88
Query: 277 DLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKD 336
DL +S Y+ L L MF I CG+ + +VLTYEDKD
Sbjct: 89 DLCVFSGYESLLENLSHMFDTSII--CGNR-----------------DRKHHVLTYEDKD 129
Query: 337 GDWMLVGDVPWEMFIDTCKRLKIMK 361
GDWM+VGD+PW+MF++T +RLKI +
Sbjct: 130 GDWMMVGDIPWDMFLETVRRLKITR 154
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 15/106 (14%)
Query: 258 LGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEI 317
+G+ ++KV+M+G P RK+DL + + Y++L L+ MF+ +
Sbjct: 82 VGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNA---------------SILWA 126
Query: 318 KLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSS 363
+ D+ N +VLTY DK+GDWM+VGDVPWEMF+ T +RLKI +++
Sbjct: 127 EEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 15/105 (14%)
Query: 258 LGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEI 317
+G+ ++KV+M+G P RK+DL + + Y +L L+ MF+ +
Sbjct: 80 VGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNA---------------SILWA 124
Query: 318 KLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKS 362
+ D+ + +VLTY DK+GDWM+VGDVPWEMF+ + +RLKI ++
Sbjct: 125 EEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Query: 262 FIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRD 321
++KV+MDG RKV + + +Y L+ LE MF G + +S ++L
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF--------------GMQSVSGLRLFQ 139
Query: 322 LLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAI 366
+ SE+ L Y D++G W GDVPW FI++ +RL+I + +DA+
Sbjct: 140 M--ESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDAV 182
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 52/168 (30%)
Query: 226 AQVVGWPPIKS---------------------FRKNTLATSSKNNDEVDGKPGLGA---- 260
++VVGWPP+K+ + T+ NN +G+
Sbjct: 93 SEVVGWPPVKTCMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSS 152
Query: 261 -------LFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEK 313
+++KV MDG RKVD++ +++Y+ L+ +L MF+ +
Sbjct: 153 SISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFT----------------E 196
Query: 314 LSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMK 361
+ D + Y T++ K+GDW+L GDV W++F ++ R+ I++
Sbjct: 197 YEDCDRED----TNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 242 LATSSKNND-EVDGKPGLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTI 300
LA NN+ E GK ++KV++DG RKV L Y L+ L MF T+
Sbjct: 83 LAQGYYNNEGESRGKYA----YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTV 138
Query: 301 GQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIM 360
LR SE+ L Y D++G W VGDVPW+ F+++ R++I
Sbjct: 139 S----------------GLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIA 182
Query: 361 KSSDAI 366
+ +DA+
Sbjct: 183 RRNDAL 188
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 26/113 (23%)
Query: 215 SNNSSSVPAAKAQVVGWPPIKSFRKNTL----ATSSKNNDEVDGKP-------------- 256
S++ + P +QVVGWPPI R N+L A + +E DG+
Sbjct: 57 SSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMK 116
Query: 257 ------GLGALFIKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQC 303
GLG F+KV+MDG RKVD+R +S+Y+ L+ LE+MF T C
Sbjct: 117 VNPKVQGLG--FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGLYC 167
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE
FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1086
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 274 RKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYE 333
R +D+ YS Y EL L +MF E +L D L S++ L Y
Sbjct: 971 RSIDVTRYSGYDELRHDLARMFGI------------------EGQLEDPLT-SDWKLVYT 1011
Query: 334 DKDGDWMLVGDVPWEMFIDTCKRLKIMKS 362
D + D +LVGD PWE F++ + +KI+ S
Sbjct: 1012 DHENDILLVGDDPWEEFVNCVQNIKILSS 1040
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 264 KVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLL 323
KV M G P R VDL Y EL +EK+F +IK +L
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------------DIK-GELR 563
Query: 324 NGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAP 370
+ +++ + + D +GD MLVGD PW F + KR+ I + + P
Sbjct: 564 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 610
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 264 KVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLL 323
KV M G P R VDL Y EL +EK+F +IK +L
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------------DIK-GELR 565
Query: 324 NGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDAIGLAP 370
+ +++ + + D +GD MLVGD PW F + KR+ I + + P
Sbjct: 566 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 263 IKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDL 322
IKV M G R VDL +Y EL LEKMF E E+ +D
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 535
Query: 323 LNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDA 365
++ + + D +GD MLVGD PW F K+L I S +
Sbjct: 536 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 574
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 263 IKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDL 322
IKV M G R VDL +Y EL LEKMF E E+ +D
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 448
Query: 323 LNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDA 365
++ + + D +GD MLVGD PW F K+L I S +
Sbjct: 449 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 487
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 263 IKVSMDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDL 322
IKV M G R VDL +Y EL LEKMF E E+ +D
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 556
Query: 323 LNGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKSSDA 365
++ + + D +GD MLVGD PW F K+L I S +
Sbjct: 557 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595
>AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID
INDUCIBLE 33); transcription factor |
chr5:23270024-23270959 FORWARD
Length = 171
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 267 MDGAPYLRKVDLRTYSTYQELSCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGS 326
++G +++ L + +YQ L+ AL +MF G + ++ L + + G
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF------------VDGADSTDDLDLSNAIPG- 125
Query: 327 EYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIM 360
+++ YED + D +L GD+ W+ F+ KR++I+
Sbjct: 126 -HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1164
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 56/258 (21%)
Query: 118 HVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGTDTDSLQSLGQGKFPGNSGISAIL 177
H + + G S +DG G ++N+L + G D DS SL G N + L
Sbjct: 911 HQLEASASGTSYGLDG-----GENNRQQNFLAPTFGLDGDSRNSLLGGANVDNGFVPDTL 965
Query: 178 SSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGVSNN---SSSVPAAKAQVVGWPPI 234
SR +Q K LQ+ N GV+N+ S A + Q G P +
Sbjct: 966 LSRGYDSQ---------KDLQNMLS-------NYGGVTNDIGTEMSTSAVRTQSFGVPNV 1009
Query: 235 KSFRKNTLATSSKNNDEVDGKPGLGA-------LFIKVSMDGAPYLRKVDLRTYSTYQEL 287
+ N LA N+ V G GL + KV G+ R +D+ Y Y EL
Sbjct: 1010 PAI-SNDLAV---NDAGVLGG-GLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDEL 1063
Query: 288 SCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPW 347
L +MF E +L D S++ L Y D + D +LVGD PW
Sbjct: 1064 RHDLARMFGI------------------EGQLEDP-QTSDWKLVYVDHENDILLVGDDPW 1104
Query: 348 EMFIDTCKRLKIMKSSDA 365
E F++ + +KI+ S++
Sbjct: 1105 EEFVNCVQSIKILSSAEV 1122
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1165
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 56/258 (21%)
Query: 118 HVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGTDTDSLQSLGQGKFPGNSGISAIL 177
H + + G S +DG G ++N+L + G D DS SL G N + L
Sbjct: 912 HQLEASASGTSYGLDG-----GENNRQQNFLAPTFGLDGDSRNSLLGGANVDNGFVPDTL 966
Query: 178 SSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGVSNN---SSSVPAAKAQVVGWPPI 234
SR +Q K LQ+ N GV+N+ S A + Q G P +
Sbjct: 967 LSRGYDSQ---------KDLQNMLS-------NYGGVTNDIGTEMSTSAVRTQSFGVPNV 1010
Query: 235 KSFRKNTLATSSKNNDEVDGKPGLGA-------LFIKVSMDGAPYLRKVDLRTYSTYQEL 287
+ N LA N+ V G GL + KV G+ R +D+ Y Y EL
Sbjct: 1011 PAI-SNDLAV---NDAGVLGG-GLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDEL 1064
Query: 288 SCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPW 347
L +MF E +L D S++ L Y D + D +LVGD PW
Sbjct: 1065 RHDLARMFGI------------------EGQLEDP-QTSDWKLVYVDHENDILLVGDDPW 1105
Query: 348 EMFIDTCKRLKIMKSSDA 365
E F++ + +KI+ S++
Sbjct: 1106 EEFVNCVQSIKILSSAEV 1123
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 56/258 (21%)
Query: 118 HVVSGNKRGFSDTMDGFSEVKGSVYSEKNWLFHSAGTDTDSLQSLGQGKFPGNSGISAIL 177
H + + G S +DG G ++N+L + G D DS SL G N + L
Sbjct: 912 HQLEASASGTSYGLDG-----GENNRQQNFLAPTFGLDGDSRNSLLGGANVDNGFVPDTL 966
Query: 178 SSRPSVAQSAMMKEVPKKVLQDRSRAANGTNLNQAGVSNN---SSSVPAAKAQVVGWPPI 234
SR +Q K LQ+ N GV+N+ S A + Q G P +
Sbjct: 967 LSRGYDSQ---------KDLQNMLS-------NYGGVTNDIGTEMSTSAVRTQSFGVPNV 1010
Query: 235 KSFRKNTLATSSKNNDEVDGKPGLGA-------LFIKVSMDGAPYLRKVDLRTYSTYQEL 287
+ N LA N+ V G GL + KV G+ R +D+ Y Y EL
Sbjct: 1011 PAI-SNDLAV---NDAGVLGG-GLWPAQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDEL 1064
Query: 288 SCALEKMFSCFTIGQCGSHGAPGKEKLSEIKLRDLLNGSEYVLTYEDKDGDWMLVGDVPW 347
L +MF E +L D S++ L Y D + D +LVGD PW
Sbjct: 1065 RHDLARMFGI------------------EGQLEDP-QTSDWKLVYVDHENDILLVGDDPW 1105
Query: 348 EMFIDTCKRLKIMKSSDA 365
E F++ + +KI+ S++
Sbjct: 1106 EEFVNCVQSIKILSSAEV 1123