Jatropha Genome Database
- JcCB0006311.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0006311.10 + phase: 0
(356 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G09760.1 | Symbols: | choline kinase, putative | chr4:614895... 492 e-139
AT4G09760.2 | Symbols: | choline kinase, putative | chr4:614895... 492 e-139
AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1); cho... 490 e-139
AT1G74320.1 | Symbols: | choline kinase, putative | chr1:279411... 486 e-138
AT4G09760.3 | Symbols: | choline kinase, putative | chr4:614959... 299 2e-81
AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187)... 181 5e-46
>AT4G09760.1 | Symbols: | choline kinase, putative |
chr4:6148955-6151150 REVERSE
Length = 346
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 225/345 (65%), Positives = 289/345 (83%), Gaps = 2/345 (0%)
Query: 1 MTIKTKGLIERNFPEELKKVLQSVASEWGDVVDDMNSLQVIPLKGAMTNEVFQINWPTKN 60
M + GLI + P+EL+K+LQ+++++WGDVV+D SL+V P+KGAMTNEVF ++WP K
Sbjct: 1 MAVGIFGLIPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKE 60
Query: 61 GDI-IRKLLIRIYGEGVEMFFRRDDEIRTFECMSKNGQGPRLLGRFADGRVEEFIHARTL 119
++ RKLL+R+YGEGVE+FF RDDEIRTFE ++++G GP LLGRFA GRVEEFIHARTL
Sbjct: 61 TNLRCRKLLVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTL 120
Query: 120 SAADLRDPEISALVAEKMREFHDLDMPGPKKVLLWSRMRDWLAEAKCLCSAKDAKQFHLD 179
SA DLRDP ISALVA K+R FH + +PG + +L+W RMR W+ +AK LCS + + +F LD
Sbjct: 121 SATDLRDPNISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLD 180
Query: 180 SLEDEINMLEKQLSQEYQEIRFCHNDLQYGNIMMDEETRSITIIDYEYSSYNPVAYDIAN 239
+EDEIN+LE++++ E QEI FCHNDLQYGNIM+DEET +ITIIDYEY+SYNP+AYDIAN
Sbjct: 181 DIEDEINLLEQEVNNE-QEIGFCHNDLQYGNIMIDEETNAITIIDYEYASYNPIAYDIAN 239
Query: 240 HFCEMVADYHSDTPHILDYSRYPGLEERCRFVRAYLSSAGEKPSEDEVEQLVNDAEKYTL 299
HFCEM ADYHS+TPHILDY+ YPG EER RF+ YL+S+GE+ E+++EQL++D EKYTL
Sbjct: 240 HFCEMAADYHSNTPHILDYTLYPGEEERRRFICNYLTSSGEEAREEDIEQLLDDIEKYTL 299
Query: 300 ANHLLWGLWGIISGYVNTLDFDYLEYARERFEQYWLRKHELLGSF 344
A+HL WGLWGIISGYVN ++FDY+EY+R+RF+QYWLRK +LL F
Sbjct: 300 ASHLFWGLWGIISGYVNKIEFDYIEYSRQRFKQYWLRKPKLLSFF 344
>AT4G09760.2 | Symbols: | choline kinase, putative |
chr4:6148955-6151150 REVERSE
Length = 346
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 225/345 (65%), Positives = 289/345 (83%), Gaps = 2/345 (0%)
Query: 1 MTIKTKGLIERNFPEELKKVLQSVASEWGDVVDDMNSLQVIPLKGAMTNEVFQINWPTKN 60
M + GLI + P+EL+K+LQ+++++WGDVV+D SL+V P+KGAMTNEVF ++WP K
Sbjct: 1 MAVGIFGLIPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKE 60
Query: 61 GDI-IRKLLIRIYGEGVEMFFRRDDEIRTFECMSKNGQGPRLLGRFADGRVEEFIHARTL 119
++ RKLL+R+YGEGVE+FF RDDEIRTFE ++++G GP LLGRFA GRVEEFIHARTL
Sbjct: 61 TNLRCRKLLVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTL 120
Query: 120 SAADLRDPEISALVAEKMREFHDLDMPGPKKVLLWSRMRDWLAEAKCLCSAKDAKQFHLD 179
SA DLRDP ISALVA K+R FH + +PG + +L+W RMR W+ +AK LCS + + +F LD
Sbjct: 121 SATDLRDPNISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLD 180
Query: 180 SLEDEINMLEKQLSQEYQEIRFCHNDLQYGNIMMDEETRSITIIDYEYSSYNPVAYDIAN 239
+EDEIN+LE++++ E QEI FCHNDLQYGNIM+DEET +ITIIDYEY+SYNP+AYDIAN
Sbjct: 181 DIEDEINLLEQEVNNE-QEIGFCHNDLQYGNIMIDEETNAITIIDYEYASYNPIAYDIAN 239
Query: 240 HFCEMVADYHSDTPHILDYSRYPGLEERCRFVRAYLSSAGEKPSEDEVEQLVNDAEKYTL 299
HFCEM ADYHS+TPHILDY+ YPG EER RF+ YL+S+GE+ E+++EQL++D EKYTL
Sbjct: 240 HFCEMAADYHSNTPHILDYTLYPGEEERRRFICNYLTSSGEEAREEDIEQLLDDIEKYTL 299
Query: 300 ANHLLWGLWGIISGYVNTLDFDYLEYARERFEQYWLRKHELLGSF 344
A+HL WGLWGIISGYVN ++FDY+EY+R+RF+QYWLRK +LL F
Sbjct: 300 ASHLFWGLWGIISGYVNKIEFDYIEYSRQRFKQYWLRKPKLLSFF 344
>AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1);
choline kinase | chr1:26971537-26973177 FORWARD
Length = 346
Score = 490 bits (1262), Expect = e-139, Method: Compositional matrix adjust.
Identities = 230/344 (66%), Positives = 283/344 (82%), Gaps = 3/344 (0%)
Query: 1 MTIKTK-GLIER-NFPEELKKVLQSVASEWGDVVDDMNSLQVIPLKGAMTNEVFQINWPT 58
M IKTK LI + PE+LK+VLQ++ S WGDVV+D+ L+V+PLKGAMTNEV+QINWPT
Sbjct: 1 MAIKTKTSLIPSCSSPEDLKRVLQTLGSSWGDVVEDLERLEVVPLKGAMTNEVYQINWPT 60
Query: 59 KNG-DIIRKLLIRIYGEGVEMFFRRDDEIRTFECMSKNGQGPRLLGRFADGRVEEFIHAR 117
NG D+ RK+L+RIYG+GV++FF R DEI+TFECMS +G GP+LLGRF+DGR+EEFIHAR
Sbjct: 61 LNGEDVHRKVLVRIYGDGVDLFFNRGDEIKTFECMSHHGYGPKLLGRFSDGRLEEFIHAR 120
Query: 118 TLSAADLRDPEISALVAEKMREFHDLDMPGPKKVLLWSRMRDWLAEAKCLCSAKDAKQFH 177
TLSA DLR E S +A K+REFH LDMPGPK VLLW R+R WL EAK L S + ++
Sbjct: 121 TLSADDLRVAETSDFIAAKLREFHKLDMPGPKNVLLWERLRTWLKEAKNLASPIEMDKYR 180
Query: 178 LDSLEDEINMLEKQLSQEYQEIRFCHNDLQYGNIMMDEETRSITIIDYEYSSYNPVAYDI 237
L+ LE+EIN+LE++L+++ QEI FCHNDLQYGN+M+DE T +ITIIDYEYSS+NP+AYDI
Sbjct: 181 LEGLENEINLLEERLTRDDQEIGFCHNDLQYGNVMIDEVTNAITIIDYEYSSFNPIAYDI 240
Query: 238 ANHFCEMVADYHSDTPHILDYSRYPGLEERCRFVRAYLSSAGEKPSEDEVEQLVNDAEKY 297
ANHFCEM A+YHSDTPH+LDY+ YPG ER RF+ YL S G S+ EVE+L+ DAE Y
Sbjct: 241 ANHFCEMAANYHSDTPHVLDYTLYPGEGERRRFISTYLGSTGNATSDKEVERLLKDAESY 300
Query: 298 TLANHLLWGLWGIISGYVNTLDFDYLEYARERFEQYWLRKHELL 341
TLANH+ WGLWGIISG+VN ++FDY+EYAR+RFEQYWLRK LL
Sbjct: 301 TLANHIFWGLWGIISGHVNKIEFDYMEYARQRFEQYWLRKPLLL 344
>AT1G74320.1 | Symbols: | choline kinase, putative |
chr1:27941192-27942903 FORWARD
Length = 350
Score = 486 bits (1252), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/346 (66%), Positives = 277/346 (80%), Gaps = 8/346 (2%)
Query: 5 TKGLIERN-------FPEELKKVLQSVASEWGDVVDDMNSLQVIPLKGAMTNEVFQINWP 57
T G E+N P E+K+ LQ++ASEW DV+D +LQVIPLKGAMTNEVFQI WP
Sbjct: 2 TMGGTEKNVENKQYRLPREVKEALQAIASEWEDVIDS-KALQVIPLKGAMTNEVFQIKWP 60
Query: 58 TKNGDIIRKLLIRIYGEGVEMFFRRDDEIRTFECMSKNGQGPRLLGRFADGRVEEFIHAR 117
T+ RK+L+RIYGEGVE+FF R+DEIRTFE MSK+G GP LLGRF +GR+EEF+HAR
Sbjct: 61 TREKGPSRKVLVRIYGEGVEIFFDREDEIRTFEFMSKHGHGPLLLGRFGNGRIEEFLHAR 120
Query: 118 TLSAADLRDPEISALVAEKMREFHDLDMPGPKKVLLWSRMRDWLAEAKCLCSAKDAKQFH 177
TLSA DLRDPEIS +A +M+EFH L+MPG KK LLW R+R+WL K L S ++AK F
Sbjct: 121 TLSACDLRDPEISGRIATRMKEFHGLEMPGAKKALLWDRLRNWLTACKRLASPEEAKSFR 180
Query: 178 LDSLEDEINMLEKQLSQEYQEIRFCHNDLQYGNIMMDEETRSITIIDYEYSSYNPVAYDI 237
LD +E EINMLEK L + I FCHNDLQYGNIMMDEET++ITIIDYEYS YNPVAYDI
Sbjct: 181 LDVMEMEINMLEKSLFDNDENIGFCHNDLQYGNIMMDEETKAITIIDYEYSCYNPVAYDI 240
Query: 238 ANHFCEMVADYHSDTPHILDYSRYPGLEERCRFVRAYLSSAGEKPSEDEVEQLVNDAEKY 297
ANHFCEM ADYH++TPHI+DYS+YPG+EER RF++ Y+S + EKPS+ V++L+ D EKY
Sbjct: 241 ANHFCEMAADYHTETPHIMDYSKYPGVEERQRFLKTYMSYSDEKPSDTMVKKLLEDVEKY 300
Query: 298 TLANHLLWGLWGIISGYVNTLDFDYLEYARERFEQYWLRKHELLGS 343
TLA+HL+WGLWGIIS +VN +DFDY+EYAR+RFEQYWL K LL +
Sbjct: 301 TLASHLIWGLWGIISEHVNEIDFDYMEYARQRFEQYWLTKPRLLAA 346
>AT4G09760.3 | Symbols: | choline kinase, putative |
chr4:6149592-6151150 REVERSE
Length = 255
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 182/224 (81%), Gaps = 2/224 (0%)
Query: 1 MTIKTKGLIERNFPEELKKVLQSVASEWGDVVDDMNSLQVIPLKGAMTNEVFQINWPTKN 60
M + GLI + P+EL+K+LQ+++++WGDVV+D SL+V P+KGAMTNEVF ++WP K
Sbjct: 1 MAVGIFGLIPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKE 60
Query: 61 GDI-IRKLLIRIYGEGVEMFFRRDDEIRTFECMSKNGQGPRLLGRFADGRVEEFIHARTL 119
++ RKLL+R+YGEGVE+FF RDDEIRTFE ++++G GP LLGRFA GRVEEFIHARTL
Sbjct: 61 TNLRCRKLLVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTL 120
Query: 120 SAADLRDPEISALVAEKMREFHDLDMPGPKKVLLWSRMRDWLAEAKCLCSAKDAKQFHLD 179
SA DLRDP ISALVA K+R FH + +PG + +L+W RMR W+ +AK LCS + + +F LD
Sbjct: 121 SATDLRDPNISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLD 180
Query: 180 SLEDEINMLEKQLSQEYQEIRFCHNDLQYGNIMMDEETRSITII 223
+EDEIN+LE++++ E QEI FCHNDLQYGNIM+DEET +ITII
Sbjct: 181 DIEDEINLLEQEVNNE-QEIGFCHNDLQYGNIMIDEETNAITII 223
>AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187);
kinase/ phosphotransferase, alcohol group as acceptor |
chr2:11443599-11446958 FORWARD
Length = 374
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 20/314 (6%)
Query: 28 WGDVVDDMNSLQVIPLKGAMTNEVFQINWPTKNGDIIRKLLIRIYGEGVEMFFRRDDEIR 87
WG++ D + S++ + G +TN + +++ + + +R+YG E R+ EI
Sbjct: 54 WGELDDSLFSVERV--SGGITNLLLKVSVKEDTNKEV-SVTVRLYGPNTEYVINREREIL 110
Query: 88 TFECMSKNGQGPRLLGRFADGRVEEFIHARTLSAADLRDPEISALVAEKMREFHDLDMPG 147
+ +S G G +LLG F +G V+ FI+ARTL +D+R+P+I+A +A ++ +FH +D+PG
Sbjct: 111 AIKYLSAAGFGAKLLGGFGNGMVQSFINARTLEPSDMREPKIAAQIARELGKFHKVDIPG 170
Query: 148 PKKVLLWSRMRDWLAEAKCLCSAKDAKQ-----FHLDSLEDEINMLEKQLSQEYQEIRFC 202
K+ LW + + +A L + KQ + L EI L + + F
Sbjct: 171 SKEPQLWVDILKFYEKASTLTFEEPDKQKLFETISFEELHKEIIELREFTGLLNAPVVFA 230
Query: 203 HNDLQYGNIMMDEETRSITIIDYEYSSYNPVAYDIANHFCEMVADYHSDTPHILDYSRYP 262
HNDL GN M+++E + +ID+EY SYN +DI NHF E + DYS YP
Sbjct: 231 HNDLLSGNFMLNDEEEKLYLIDFEYGSYNYRGFDIGNHFNEYAG-------YDCDYSLYP 283
Query: 263 GLEERCRFVRAYLSSAGEKPSE---DEVEQLVNDAEKYTLANHLLWGLWGIISGYVNTLD 319
EE+ F++ YL +KP E EVE + + + Y LA+HL W +W II ++ ++
Sbjct: 284 SKEEQYHFIKHYLQP--DKPDEVSIAEVESVFVETDAYKLASHLYWAIWAIIQARMSPIE 341
Query: 320 FDYLEYARERFEQY 333
F+YL Y R+ +Y
Sbjct: 342 FEYLGYFFLRYNEY 355