Jatropha Genome Database
- JcCB0005331.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0005331.30 - phase: 0
(689 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G51920.1 | Symbols: | catalytic/ pyridoxal phosphate binding... 436 e-122
AT5G66950.1 | Symbols: | catalytic/ pyridoxal phosphate binding... 288 8e-78
AT4G37100.1 | Symbols: | catalytic/ pyridoxal phosphate binding... 276 3e-74
AT2G23520.1 | Symbols: | catalytic/ pyridoxal phosphate binding... 276 5e-74
AT4G22980.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 259 3e-69
>AT5G51920.1 | Symbols: | catalytic/ pyridoxal phosphate binding |
chr5:21097202-21098914 REVERSE
Length = 570
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/388 (56%), Positives = 275/388 (70%), Gaps = 14/388 (3%)
Query: 13 CLNGC-CPTPLFGYPVSQEKIGQTRS-TASTCRRNFAATAASSIFPNTQFTNPESLPSLQ 70
CL+GC +P G S+ T + T++T RRNFA T S+IFP+T+FT+P SLPS Q
Sbjct: 14 CLHGCFSSSPFHGTTSSEHPPHSTPTVTSATLRRNFAQTTVSTIFPDTEFTDPNSLPSHQ 73
Query: 71 ESFAEFTKAYPQYSGTYQVDQIRAQEYYQLSHSHHTCLDYIGIGLFSYSQLQKHDSRKLV 130
ESF++F +AYP YS TY++D++R+ Y+ L SH+TCLDYIGIGL+SYSQL +D
Sbjct: 74 ESFSDFIQAYPNYSDTYKIDRLRSDHYFHLGLSHYTCLDYIGIGLYSYSQLLNYDP---- 129
Query: 131 XXXXXXXXXXPQISHFPFFSVSYKTGNLKTQLLH-GGQESELESAIKNRIMRFLNISEKD 189
+S PFFSVS K GNLK +LL+ GGQE+E E ++K RIM FL ISE+D
Sbjct: 130 ----STYQISSSLSESPFFSVSPKIGNLKEKLLNDGGQETEFEYSMKRRIMGFLKISEED 185
Query: 190 YCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETMINCSEKKGAKIMSAEFSW 249
Y MVFTANRTSAF+LVAESYPF+S +KLLTVYDYESEAV + SEK+GAK+ +AEFSW
Sbjct: 186 YSMVFTANRTSAFRLVAESYPFNSKRKLLTVYDYESEAVSEINRVSEKRGAKVAAAEFSW 245
Query: 250 PRLRIHSAXXXXXXXXXX--XXXXXXGLFVFPLHSRVTGARYPYLWMSVAQENDWHILID 307
PRL++ S+ G++VFPLHSRVTG+RYPYLWMSVAQEN WH++ID
Sbjct: 246 PRLKLCSSKLRKLVTAGKNGSKTKKKGIYVFPLHSRVTGSRYPYLWMSVAQENGWHVMID 305
Query: 308 ACALGPKDMDSFGLSLIRPDFLILSFYKIFGENPSGFGCLFVKKSTVPHMEDSNSTGMIR 367
AC LGPKDMDSFGLS+ PDF++ SFYK+FGENPSGFGCLFVKKST+ +E S GMI
Sbjct: 306 ACGLGPKDMDSFGLSIYNPDFMVCSFYKVFGENPSGFGCLFVKKSTISILESSTGPGMIN 365
Query: 368 LIPA-NKLFWFLDESSGTDVELEQTTKF 394
L+P N + E + T + E+T F
Sbjct: 366 LVPTDNPISLHALEINRTQTDSEETYSF 393
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 12/172 (6%)
Query: 507 IECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHPNTEEIPVIRIYGPKIKFDRGPA 566
+E +GLD VD LGL NR+RCLINWLV+AL KLKH T + ++IYGPK+ F+RGPA
Sbjct: 397 VEYKGLDHVDSLGLVATGNRSRCLINWLVSALYKLKHSTTSRL--VKIYGPKVNFNRGPA 454
Query: 567 LAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISFSDKFEEDKATVLERKASSVKG 626
+AFN+F+ KGEKIE ++QKLA+ SNISL FL +I F + +E K V E+K
Sbjct: 455 VAFNLFNHKGEKIEPFIVQKLAECSNISLGKSFLKNILFQEDYEGVKDRVFEKK------ 508
Query: 627 KLTNKREEKSNLGITVATVALGFLANFEDTYRLWAFIAQFLDADFVEKAKWR 678
+ + I+V T ALGFLANFED Y+LW F+A+FLD++FV+K R
Sbjct: 509 ----RNRDVDEPRISVLTAALGFLANFEDVYKLWIFVARFLDSEFVDKESVR 556
>AT5G66950.1 | Symbols: | catalytic/ pyridoxal phosphate binding |
chr5:26733333-26735945 FORWARD
Length = 870
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 221/359 (61%), Gaps = 36/359 (10%)
Query: 28 SQEKI-GQTRSTAS-TCRRNFAATAASSIFPNTQFTNPESLPSLQESFAEFTKAYPQYSG 85
SQ++I G++RS A +R F A+S+ F + E+LP L+E+ F YP+Y
Sbjct: 70 SQDQILGRSRSLARLNAQREF--LRATSLAAQRAFESEETLPELEEALTIFLTMYPKYQS 127
Query: 86 TYQVDQIRAQEYYQLSHSHHTCLDYIGIGLFSYSQLQKHDSRKLVXXXXXXXXXXPQISH 145
+ +VD++R EY+ LS CLDY G GLFSY Q H
Sbjct: 128 SEKVDELRNDEYFHLSLPK-VCLDYCGFGLFSY----------------------LQTVH 164
Query: 146 F---PFFSVSYKTGNLKTQLLHGGQE-SELESAIKNRIMRFLNISEKDYCMVFTANRTSA 201
+ FS+S + NL ++GG E +E IK RIM +LNI E +Y +VFT +R SA
Sbjct: 165 YWDTCTFSLSEISANLSNHAIYGGAEKGSIEHDIKIRIMDYLNIPENEYGLVFTVSRGSA 224
Query: 202 FKLVAESYPFSSSQKLLTVYDYESEAVETMINCSEKKGAKIMSAEFSWPRLRIHSAXXXX 261
FKL+AESYPF +++KLLT++D+ES++V M C+++KGAK+ SA F WP LR+ S
Sbjct: 225 FKLLAESYPFHTNKKLLTMFDHESQSVSWMGQCAKEKGAKVGSAWFKWPTLRLCSMDLKK 284
Query: 262 X--XXXXXXXXXXXGLFVFPLHSRVTGARYPYLWMSVAQENDWHILIDACALGPKDMDSF 319
GLFVFP+ SRVTG++Y Y WM++AQ+N+WH+L+DA ALGPKDMDS
Sbjct: 285 EILSKKKRKKDSATGLFVFPVQSRVTGSKYSYQWMALAQQNNWHVLLDAGALGPKDMDSL 344
Query: 320 GLSLIRPDFLILSFYKIFGENPSGFGCLFVKKSTVPHMEDSN---STGMIRLIPANKLF 375
GLSL RPDF+I SFY++FG +P+GFGCL +KKS + ++ + S+G++++ P L+
Sbjct: 345 GLSLFRPDFIITSFYRVFGYDPTGFGCLLIKKSVISCLQSQSGKTSSGIVKITPEYPLY 403
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 109/176 (61%), Gaps = 17/176 (9%)
Query: 506 EIECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHPNT----EEIPVIRIYGPKIKF 561
EI CR +D V++LGL + ++R R LINWLV +L++L+ P + E +++IYGPKIK+
Sbjct: 692 EIVCRHIDHVNMLGLNKTTSRLRYLINWLVTSLLQLRLPRSDSDGEHKNLVQIYGPKIKY 751
Query: 562 DRGPALAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISFSDKFEEDKATVLERKA 621
+RG ++AFN+ D K + ++QKLA+R ISL G+L HI D ED +
Sbjct: 752 ERGSSVAFNIRDLKSGMVHPEIVQKLAEREGISLGIGYLSHIKIIDNRSED--------S 803
Query: 622 SSVKGKLTNKREEKSN--LGITVATVALGFLANFEDTYRLWAFIAQFLDADFVEKA 675
SS K RE ++N + + V T +LGFL NFED YRLW F+A+FL F ++
Sbjct: 804 SSWK---PVDREGRNNGFIRVEVVTASLGFLTNFEDVYRLWNFVAKFLSPGFAKQG 856
>AT4G37100.1 | Symbols: | catalytic/ pyridoxal phosphate binding |
chr4:17479173-17481863 REVERSE
Length = 896
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 216/363 (59%), Gaps = 32/363 (8%)
Query: 32 IGQTRSTAST-CRRNFAATAASSIFPNTQFTNPESLPSLQESFAEFTKAYPQYSGTYQVD 90
+G++RS A +R F A+++ + +S+P L+E+ +F YP+Y + ++D
Sbjct: 79 LGRSRSLARLHAQREF--LRATALAAERIIESEDSIPELREALTKFLSMYPKYQASEKID 136
Query: 91 QIRAQEYYQLSHS-HHTCLDYIGIGLFSYSQ-LQKHDSRKLVXXXXXXXXXXPQISHFPF 148
Q+R+ EY LS S CLDY G GLFSY Q L D+
Sbjct: 137 QLRSDEYSHLSSSASKVCLDYCGFGLFSYVQTLHYWDT--------------------CT 176
Query: 149 FSVSYKTGNLKTQLLHGGQES-ELESAIKNRIMRFLNISEKDYCMVFTANRTSAFKLVAE 207
FS+S T NL L+GG ES +E IK RIM +LNI E +Y +VFT +R SAF+L+AE
Sbjct: 177 FSLSEITANLSNHALYGGAESGTVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFRLLAE 236
Query: 208 SYPFSSSQKLLTVYDYESEAVETMINCSEKKGAKIMSAEFSWPRLRIHSA--XXXXXXXX 265
SYPF S+++LLT++D+ES++V M + +KGAK +A F WP L++ S
Sbjct: 237 SYPFQSNKRLLTMFDHESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRLSYKK 296
Query: 266 XXXXXXXXGLFVFPLHSRVTGARYPYLWMSVAQENDWHILIDACALGPKDMDSFGLSLIR 325
GLFVFP SRVTG +Y Y WM++AQ+N WH+L+DA +LGPKDMDS GLSL R
Sbjct: 297 RKKKDSAVGLFVFPAQSRVTGTKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFR 356
Query: 326 PDFLILSFYKIFGENPSGFGCLFVKKSTVPHMEDSN---STGMIRLIPANKLFWFLDESS 382
P+F+I SFY++FG +P+GFGCL +KKS + ++ + +G++++ P L+ D
Sbjct: 357 PEFIITSFYRVFGHDPTGFGCLLIKKSVMGSLQSQSGKTGSGIVKITPEYPLY-LSDSVD 415
Query: 383 GTD 385
G D
Sbjct: 416 GLD 418
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 501 RNGIMEIECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHPNT--EEIPVIRIYGPK 558
R+ EI CR +D V++LGL + + R R LINWLV +L++L+ P + + +++IYGPK
Sbjct: 706 RDTETEIVCRHIDHVNMLGLNKTTTRLRFLINWLVISLLQLQVPESGGRHMNLVQIYGPK 765
Query: 559 IKFDRGPALAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISFSD-KFEEDKATVL 617
IK++RG A+AFNV D + ++Q+L DR +SL G L HI D K +A
Sbjct: 766 IKYERGAAVAFNVRDKSKGFVSPEIVQRLGDREGVSLGIGILSHIRIVDEKPRNHRARTK 825
Query: 618 ERKASSVKGKLTNKREEKSNLGITVATVALGFLANFEDTYRLWAFIAQFLDADF 671
E A L N+ + + V T +L FL NFED Y+LW F+A+FL+ F
Sbjct: 826 EDSAL----HLQNEAGKNGFIRFEVVTASLSFLTNFEDVYKLWVFVAKFLNPGF 875
>AT2G23520.1 | Symbols: | catalytic/ pyridoxal phosphate binding |
chr2:10014256-10016943 REVERSE
Length = 895
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 31/354 (8%)
Query: 30 EKIGQTRSTAST-CRRNFAATAASSIFPNTQFTNPESLPSLQESFAEFTKAYPQYSGTYQ 88
E +G++RS A +R F A+++ F + + +P L E+F +F YP++ + +
Sbjct: 75 ESLGRSRSLARLHAQREF--LRATALAAERAFESEDDIPELLEAFNKFLTMYPKFETSEK 132
Query: 89 VDQIRAQEYYQLSHSHHTCLDYIGIGLFSYSQ-LQKHDSRKLVXXXXXXXXXXPQISHFP 147
VDQ+R+ EY L S CLDY G GLFSY Q L DS
Sbjct: 133 VDQLRSDEYGHLLDSK-VCLDYCGFGLFSYVQTLHYWDSCT------------------- 172
Query: 148 FFSVSYKTGNLKTQLLHGGQE-SELESAIKNRIMRFLNISEKDYCMVFTANRTSAFKLVA 206
FS+S T NL L+GG E +E +K RIM +LNI E +Y +VFT +R SAF+L+A
Sbjct: 173 -FSLSEITANLSNHALYGGAEIGTVEHDLKTRIMDYLNIPESEYGLVFTGSRGSAFRLLA 231
Query: 207 ESYPFSSSQKLLTVYDYESEAVETMINCSEKKGAKIMSAEFSWPRLRIHSA--XXXXXXX 264
ESYPF ++++LLT++D+ES++V M + +KGAK +A F WP L++ S
Sbjct: 232 ESYPFHTNKRLLTMFDHESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRLSHK 291
Query: 265 XXXXXXXXXGLFVFPLHSRVTGARYPYLWMSVAQENDWHILIDACALGPKDMDSFGLSLI 324
GLFVFP SRVTG++Y Y WM++AQ+N+WH+L+DA +LGPKDMDS GLSL
Sbjct: 292 KRKKKDSAVGLFVFPAQSRVTGSKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGLSLF 351
Query: 325 RPDFLILSFYKIFGENPSGFGCLFVKKSTVPHMEDSN---STGMIRLIPANKLF 375
RP+F+I SFYK+FG +P+GFGCL +KKS + +++ + +G++++ P L+
Sbjct: 352 RPEFIITSFYKVFGHDPTGFGCLLIKKSVMGNLQSQSGKTGSGIVKITPQYPLY 405
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 22/181 (12%)
Query: 506 EIECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHP------NTEEIPVIRIYGPKI 559
EI C +D V++LGL + ++R R LINWLV +L++LK P ++ + +++IYGPKI
Sbjct: 703 EIVCSHIDHVNMLGLNKTTSRLRFLINWLVISLLQLKVPEPGSDGSSRYMNLVQIYGPKI 762
Query: 560 KFDRGPALAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISFSD---------KFE 610
K++RG A+AFNV D + ++ KLA+R +SL G L HI D + +
Sbjct: 763 KYERGAAVAFNVKDKSKGFVSPEIVLKLAEREGVSLGIGILSHIRIMDLPRNHRGGARIK 822
Query: 611 EDKATVLERKASSVKGKLTNKREEKSNLGITVATVALGFLANFEDTYRLWAFIAQFLDAD 670
ED + L+R+A GK R E V T +L FL+NFED Y+LWAF+A+FL+
Sbjct: 823 EDSSLHLQREAGKRGGKNGFVRFE-------VVTASLSFLSNFEDVYKLWAFVAKFLNPG 875
Query: 671 F 671
F
Sbjct: 876 F 876
>AT4G22980.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: catalytic/ pyridoxal
phosphate binding (TAIR:AT5G51920.1); Has 294 Blast hits
to 268 proteins in 91 species: Archae - 4; Bacteria -
15; Metazoa - 79; Fungi - 66; Plants - 107; Viruses - 0;
Other Eukaryotes - 23 (source: NCBI BLink). |
chr4:12043974-12045653 REVERSE
Length = 559
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 205/358 (57%), Gaps = 33/358 (9%)
Query: 1 MQSPCLKEAAQVCLNGCCPTPLFGYPVSQEKIGQTRSTASTCRRNFAATAASSIFPNTQF 60
M S ++EA++ C NGCC +P EK + + +T T S + NT+F
Sbjct: 1 MNSHFIQEASEACFNGCCSSPF-SSHSMSEKPEELEFSVTT-------TGTSFLTRNTKF 52
Query: 61 TNPESLPSLQESFAEFTKAYPQYSGTYQVDQIRAQEYYQLSHSHHTCLDYIGIG----LF 116
T+ ESLP L+ SF + A+P Y T Q D +R+ EY LS S H G LF
Sbjct: 53 TSQESLPRLRTSFYDLITAFPDYLQTNQADHLRSTEYQNLSSSSHV------FGQQQPLF 106
Query: 117 SYSQLQKHDSRKLVXXXXXXXXXXPQISHFPFFSVSYKTGNLKTQLLHGGQESELESAIK 176
SYSQ ++ ++H ++S K + +LL +ES +S I+
Sbjct: 107 SYSQFRE------------ISESESDLNH-SLLTLSCKQVSSGKELLSFEEESRFQSRIR 153
Query: 177 NRIMRFLNISEKDYCMVFTANRTSAFKLVAESYPFSSSQKLLTVYDYESEAVETMINCSE 236
RI F+N+ E +Y M+ T +R+SAFK+VAE Y F ++ LLTVY+YE EAVE MI SE
Sbjct: 154 KRITSFMNLEESEYHMILTQDRSSAFKIVAELYSFKTNPNLLTVYNYEDEAVEEMIRISE 213
Query: 237 KKGAKIMSAEFSWPRLRIHSAXXXXXXXXXXXXXXXXGLFVFPLHSRVTGARYPYLWMSV 296
KKG K SAEFSWP I S GLFVFPL S VTGA Y Y WMS+
Sbjct: 214 KKGIKPQSAEFSWPSTEILSE-KLKRRITRSKRRGKRGLFVFPLQSLVTGASYSYSWMSL 272
Query: 297 AQENDWHILIDACALGPKDMDSFGLSLIRPDFLILSFYKIFG-ENPSGFGCLFVKKST 353
A+E++WH+L+D ALG KDM++ GLSL +PDFLI SF ++ G ++PSGFGCLFVKKS+
Sbjct: 273 ARESEWHVLLDTSALGSKDMETLGLSLFQPDFLICSFTEVLGQDDPSGFGCLFVKKSS 330
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 24/181 (13%)
Query: 507 IECRGLDQVDLLGLTQISNRARCLINWLVNALMKLKHP--NTEEIPVIRIYGPKIKFDRG 564
IE +GLD D LGL IS R++ L WL+ AL L+HP + E+P++++YGPK K RG
Sbjct: 398 IEFQGLDHADSLGLILISRRSKSLTLWLLRALRTLQHPGYHQTEMPLVKLYGPKTKPSRG 457
Query: 565 PALAFNVFDWKGEKIEAPLIQKLADRSNISLSCGFLHHISFSDKFEEDKATVLERKASSV 624
P+++FN+FDW+GEK++ ++++LA+R I L C +LH +K D+A
Sbjct: 458 PSISFNIFDWQGEKVDPLMVERLAEREKIGLRCAYLHKFRIGNKRRSDEAV--------- 508
Query: 625 KGKLTNKREEKSNLGITVATVAL-GFLANFEDTYRLWAFIAQFLDADFVEKAKWRYTALN 683
+L ++V TV L GF+ NFED +++W F+++FLDADFVEK KWR AL+
Sbjct: 509 ------------SLRLSVVTVRLGGFMTNFEDVFKVWEFVSRFLDADFVEKEKWRMKALD 556
Query: 684 Q 684
+
Sbjct: 557 K 557