Jatropha Genome Database
- JcCB0005331.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0005331.20 + phase: 0
(511 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 614 e-176
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 361 e-100
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 356 2e-98
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 344 8e-95
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 5e-93
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 1e-89
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 2e-89
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 4e-88
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 1e-87
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 4e-87
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 1e-85
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 2e-85
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 8e-84
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 5e-83
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 6e-82
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 1e-81
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 8e-80
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 294 1e-79
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 4e-79
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 7e-79
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 8e-79
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 2e-78
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 3e-78
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 4e-77
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 285 4e-77
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 284 1e-76
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 4e-76
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 282 4e-76
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 1e-75
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 7e-75
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 278 7e-75
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 9e-75
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 277 1e-74
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 276 2e-74
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 5e-74
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 9e-74
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 9e-74
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 1e-73
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 1e-73
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 272 4e-73
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 7e-73
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 5e-72
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 8e-72
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 266 2e-71
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 5e-71
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 6e-71
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 8e-71
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 3e-70
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 261 6e-70
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 7e-70
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 261 8e-70
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 261 9e-70
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 260 1e-69
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 1e-69
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 3e-69
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 258 7e-69
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 7e-69
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 258 1e-68
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 256 2e-68
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 6e-68
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 254 1e-67
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 5e-67
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 6e-67
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 1e-66
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 4e-66
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 4e-66
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 1e-65
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 2e-65
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 4e-65
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 245 5e-65
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 245 5e-65
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 245 6e-65
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 7e-65
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 4e-64
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 5e-64
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 1e-63
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 239 4e-63
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 5e-63
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 2e-62
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 236 3e-62
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 3e-62
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 7e-62
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 234 7e-62
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 8e-62
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 234 1e-61
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 232 4e-61
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 5e-61
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 229 3e-60
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 3e-60
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 4e-60
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 9e-60
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 9e-60
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 2e-59
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 4e-59
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 6e-59
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 6e-59
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 223 2e-58
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 219 5e-57
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 7e-57
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 8e-57
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 2e-56
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 2e-56
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 4e-56
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 215 5e-56
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 213 2e-55
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 4e-55
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 6e-55
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 9e-54
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 207 1e-53
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 9e-53
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 4e-52
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 5e-51
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 8e-51
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 2e-49
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 4e-48
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 188 6e-48
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 5e-47
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 183 2e-46
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 3e-46
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 181 9e-46
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 3e-45
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 4e-45
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 8e-44
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 171 1e-42
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 7e-28
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 8e-27
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 117 2e-26
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 117 2e-26
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 117 3e-26
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 5e-26
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 9e-26
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 113 2e-25
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 111 1e-24
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 110 2e-24
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 7e-24
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 104 1e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 103 3e-22
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 99 9e-21
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 98 2e-20
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 97 4e-20
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 4e-20
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 9e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 95 1e-19
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 87 2e-17
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 9e-17
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 83 5e-16
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 82 1e-15
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 81 1e-15
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 80 3e-15
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 79 7e-15
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 78 1e-14
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 78 2e-14
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 77 2e-14
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 77 3e-14
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 77 4e-14
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 76 4e-14
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 75 8e-14
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 2e-13
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 74 2e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 4e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 73 5e-13
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 73 6e-13
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 72 9e-13
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 68 2e-11
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 67 3e-11
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 3e-11
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 67 4e-11
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 5e-11
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 66 7e-11
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 65 1e-10
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 63 4e-10
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 62 6e-10
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 57 3e-08
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 55 1e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 55 1e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 1e-07
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 54 2e-07
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 52 1e-06
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 50 3e-06
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 49 6e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 7e-06
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 614 bits (1584), Expect = e-176, Method: Compositional matrix adjust.
Identities = 299/491 (60%), Positives = 372/491 (75%), Gaps = 2/491 (0%)
Query: 9 KWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQC 68
K VLL+ I RC++L+ FK+I QL+T ++R+DL++ +VV F GKS DF + L
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 69 DWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
+SSF +N+L+SSYA D+P++ I Y+ V NGF PD +TFP + K+C F GI EG
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
QIHGIV KMG D+YVQNSLVH YGVC + R+A KVF EMPVRDVVSWT II G+ R
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 189 GLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
GL+ EA+ F M+VEPN AT+V +LV GR G L +G+ IHGLI KRAS +SLE NAL
Sbjct: 186 GLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH-SSGIEPD 307
+DMYVKCE LS+A ++F EL KKD VSW S+ISGLV C+R KE++ LF M SSGI+PD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
G ILTSVLSACA++G +D+GRWVHEYI IK D HIGTA+VDMYAKCG IE AL+ FN
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
+ KN+FTWNALL GLA+HG G +L++FEEMV G PN VTFLA L ACCH+GLVD+
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
GR+YF++M S++YNL P+LEHYGCM DLLCRAGLLDEAL LV+ MP+ PDV I GA+LSA
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 488 CKDKG-ILKLP 497
CK++G +++LP
Sbjct: 486 CKNRGTLMELP 496
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/529 (35%), Positives = 306/529 (57%), Gaps = 40/529 (7%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD-FVDFGCGFLKQCDW 70
LL + +C L K+I AQ++ +G++ + R++ F S ++D+ LK +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE- 114
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNG---FLPDSYTFPAMLKSCAMFLGIGE 127
+ F +N I ++ S+ P+ + L Y+Q++R+G PD +T+P + K CA
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
G I G V+K+ L +V N+ +H++ C D +A KVFDE PVRD+VSW +I GY +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 188 AGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA 244
G ++A+ ++ M V+P+ T + L+ C G+L G+ + + + ++++
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL--------------------- 283
NALMDM+ KC + EA++IF L K+ IVSWT++ISG
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 284 ----------VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
VQ +R +++L LF++M +S +PD + + LSAC+ +G LD G W+H Y
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
I++ ++ ++ +GT++VDMYAKCG I AL F+ + +N T+ A++ GLA+HG A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 394 LKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMT 453
+ +F EM+ G P+E+TF+ +L+ACCH G++ GR YF+QM S ++NL+P+L+HY M
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS-RFNLNPQLKHYSIMV 533
Query: 454 DLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
DLL RAGLL+EA L+ +MPM D + GALL C+ G ++L + +
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/522 (37%), Positives = 300/522 (57%), Gaps = 40/522 (7%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDF--VDFGCGFLKQCDW 70
L + C L+S + IHAQ++ G+ + + ++++F S F + + K
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ- 95
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ +N++ +A S P A+ Y ++ G LP+SYTFP +LKSCA EG Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLY---GVCDDC--------------------------- 160
IHG V+K+G DLYV SL+ +Y G +D
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 161 -RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVG 216
+A K+FDE+PV+DVVSW ++I+GYA G + EA+ +F M NV P+ +T V+++
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
C +SG++ +GR++H I +L+ NAL+D+Y KC L A +F LP KD++SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
++I G KE+L+LF++M SG P+ V + S+L ACA++G +D GRW+H YID+
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 337 R--AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
R + + T+++DMYAKCG IE A Q FN + K++ +WNA++ G AMHGR A+
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 395 KFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
F M G P+++TF+ +L+AC HSG++D GR F M +Q Y ++P+LEHYGCM D
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM-TQDYKMTPKLEHYGCMID 514
Query: 455 LLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
LL +GL EA ++ M M PD +I +LL ACK G ++L
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 223/495 (45%), Gaps = 90/495 (18%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
SS+PF+ L SS SD P +I + + ++L +C + IH
Sbjct: 13 SSYPFHFLPSS---SDPPYDSIRNHPSL-------------SLLHNCKTLQSL---RIIH 53
Query: 133 GIVIKMGLVCDLYVQNSLVH---LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
+IK+GL Y + L+ L + A VF + +++ W ++ G+A +
Sbjct: 54 AQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSS 113
Query: 190 LFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
A+ ++ +S+ + PN+ TF +L C +S + G++IHG + K + L
Sbjct: 114 DPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHT 173
Query: 247 ALMDMYVKCECLSEA-------------------------------KQIFHELPKKDIVS 275
+L+ MYV+ L +A +++F E+P KD+VS
Sbjct: 174 SLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVS 233
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
W ++ISG + KE+L LF+ M + + PD + +V+SACA G ++ GR VH +ID
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALK 395
++ I A++D+Y+KCG +E A F +P K++ +WN L+ G AL
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR---KYFNQMIS--------------- 437
F+EM+ G TPN+VT L+IL AC H G +D GR Y ++ +
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 438 -----------QQYN--LSPRLEHYGCMTDLLCRAGLLDEALML---VRTMPMAPDVLIL 481
Q +N L L + M G D + L +R + + PD +
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 482 GALLSACKDKGILKL 496
LLSAC G+L L
Sbjct: 474 VGLLSACSHSGMLDL 488
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 344 bits (882), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 288/520 (55%), Gaps = 36/520 (6%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+L+ + C +L K++HA ++ + ++ + L S + +
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPS 72
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
S FN + + S P+ IL Y++I G D ++F +LK+ + + EGM+
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+HG+ K+ +CD +V+ + +Y C A VFDEM RDVV+W ++I Y R GL
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI-------------- 233
DEA +F M NV P+ +++ CGR+GN+R R I+ +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 234 -----------------FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
F++ S +L S A++ Y KC L +A+ IF + KKD+V W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
T++IS V+ P+E+L +F +M SGI+PD V + SV+SACAN+G LD +WVH I
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
++ ++ I A+++MYAKCG ++ F +MP +N+ +W++++N L+MHG AL
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
F M E PNEVTF+ +L C HSGLV++G+K F M + +YN++P+LEHYGCM DL
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM-TDEYNITPKLEHYGCMVDLF 491
Query: 457 CRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
RA LL EAL ++ +MP+A +V+I G+L+SAC+ G L+L
Sbjct: 492 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELEL 531
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 338 bits (867), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 274/491 (55%), Gaps = 41/491 (8%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD--FVDFGCGFLKQCD 69
+L + R +L ++ HA ++ +G+ + ++V F + + V + L +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
+ F NS+I +YA S P++A+ +R+++ PD Y+F +LK+CA F G EG
Sbjct: 102 -SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
QIHG+ IK GLV D++V+N+LV++YG A KV D MPVRD VSW S+++ Y G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 190 LFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
L DEA +F M + ++E+ N ++
Sbjct: 221 LVDEARALFDEME------------------------------------ERNVESWNFMI 244
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE-PDG 308
Y + EAK++F +P +D+VSW ++++ E L +F KM E PDG
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG 304
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
L SVLSACA++G L G WVH YID+ I+ + + TA+VDMY+KCG I++AL+ F
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
+++ TWN++++ L++HG G AL+ F EMV EG PN +TF+ +L+AC H G++D+
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQA 424
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
RK F +M+S Y + P +EHYGCM DLL R G ++EA LV +P ++L +LL AC
Sbjct: 425 RKLF-EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGAC 483
Query: 489 KDKGILKLPTR 499
K G L+ R
Sbjct: 484 KRFGQLEQAER 494
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 278/473 (58%), Gaps = 13/473 (2%)
Query: 25 FKKIHAQLVTSGI--VRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLIS 82
K+IH L+TS I R DL + R++ + + L Q +S ++SLI
Sbjct: 17 LKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQ-TLSIQLWDSLIG 75
Query: 83 SYAG--SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF-LGIGEGMQIHGIVIKMG 139
++G + +++ L YR + RNG +P +TFP +LK A+F L Q H ++K G
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLK--AVFKLRDSNPFQFHAHIVKFG 133
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
L D +V+NSL+ Y A ++FD +DVV+WT++I G+ R G EA+ F+
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 200 SMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNALMDMYVKC 255
M V N T VS+L G+ ++R GR +HGL + K + ++L+DMY KC
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
C +A+++F E+P +++V+WT++I+G VQ + + +++F +M S + P+ L+SVL
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
SACA+VG L GR VH Y+ + +I+ + GT ++D+Y KCGC+E A+ F + KN++
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
TW A++NG A HG A F M+ +PNEVTF+A+L+AC H GLV++GR+ F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
++N+ P+ +HY CM DL R GLL+EA L+ MPM P ++ GAL +C
Sbjct: 434 -KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC 485
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 18/245 (7%)
Query: 261 AKQIFHELPKKDIVSWTSII---SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
A+++ +L I W S+I SG + R + S + +R M +G+ P +L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNR-RLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
+ D + ++ H +I + + D + +++ Y+ G + A + F+ K++ TW
Sbjct: 114 VFKLRDSNPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
A+++G +G A+ +F EM G NE+T +++L A +G V+ R F + +
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVEDVR--FGRSVH 227
Query: 438 QQYNLSPRLE----HYGCMTDLLCRAGLLDEALMLVRTMP----MAPDVLILGALLSACK 489
Y + R++ + D+ + D+A + MP + LI G + S C
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 490 DKGIL 494
DKG+L
Sbjct: 288 DKGML 292
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 283/521 (54%), Gaps = 39/521 (7%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFG-KSVDFVDFGCGFLKQCDWR 71
+ I RC +L+ K+ H ++ +G + ++ S +++ + +
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP-K 92
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMFLGIGEGMQ 130
+SF +N+LI +YA P ++I + +V P+ YTFP ++K+ A + G
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+HG+ +K + D++V NSL+H Y C D SA KVF + +DVVSW S+I G+ + G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
D+A+ +F M +V+ + T V +L C + NL GR++ I + V+L +NA
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 248 LMDMYVKCECLSEAKQIF-------------------------------HELPKKDIVSW 276
++DMY KC + +AK++F + +P+KDIV+W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 277 TSIISGLVQCQRPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
++IS Q +P E+L++F ++ ++ + + L S LSACA VG L+ GRW+H YI
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALK 395
+ I+ + H+ +A++ MY+KCG +E++ + FN + +++F W+A++ GLAMHG G A+
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDL 455
F +M PN VTF + AC H+GLVD+ F+QM S Y + P +HY C+ D+
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES-NYGIVPEEKHYACIVDV 511
Query: 456 LCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
L R+G L++A+ + MP+ P + GALL ACK L L
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 113/228 (49%), Gaps = 22/228 (9%)
Query: 4 IRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCG 63
+ L L +LD +C +++ K++ + ++++ ++D + S D+
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEE----KDNVTWTTMLDGYAISEDY------ 314
Query: 64 FLKQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQI-VRNGFLPDSYTFPAML 116
+ ++S P +N+LIS+Y + +P A++ + ++ ++ + T + L
Sbjct: 315 --EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
+CA + G IH + K G+ + +V ++L+H+Y C D + +VF+ + RDV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSG 221
W+++I G A G +EAV MF M NV+PN TF ++ C +G
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 257/461 (55%), Gaps = 40/461 (8%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N ++ S A + + ++ G PD++T P +LKS + EG ++HG +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K GL D YV NSL+ +Y KVFDEMP RDVVSW +I+ Y G F++A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 197 MFLSMNVEPN----TATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+F M+ E N T VS L C NL +G RI+ + ++S+ NAL+DM+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF-EMSVRIGNALVDMF 192
Query: 253 VKCECLSEAKQIFHEL-------------------------------PKKDIVSWTSIIS 281
KC CL +A+ +F + P KD+V WT++++
Sbjct: 193 CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G VQ R E+L LFR M ++GI PD +L S+L+ CA G L+ G+W+H YI+ +
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
D +GTA+VDMYAKCGCIE AL+ F E+ ++ +W +L+ GLAM+G AL + EM
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
G + +TF+A+LTAC H G V +GRK F+ M ++++N+ P+ EH C+ DLLCRAGL
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSM-TERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 462 LDEALMLVRTMPMAPD---VLILGALLSACKDKGILKLPTR 499
LDEA L+ M D V + +LLSA ++ G +K+ R
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAER 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 4/206 (1%)
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
L ++ + ++ L + + L LF ++ G+ PD L VL + + + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
VH Y + ++ D ++ +++ MYA G IE + F+EMP +++ +WN L++ +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 388 GRGYAALKFFEEMVGEGSTP-NEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRL 446
GR A+ F+ M E + +E T ++ L+AC ++ G + + + + ++ +S R+
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRI 184
Query: 447 EHYGCMTDLLCRAGLLDEALMLVRTM 472
+ + D+ C+ G LD+A + +M
Sbjct: 185 GN--ALVDMFCKCGCLDKARAVFDSM 208
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 284/503 (56%), Gaps = 16/503 (3%)
Query: 5 RLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFG-CG 63
R +L+ L +++C ++ ++I AQ++ + + + ++ K+V+ DF
Sbjct: 29 RGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIP-------KAVELGDFNYSS 81
Query: 64 FLKQCDWRVSSFPFNSLISSYAGS-DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
FL + + FN +I + + + A+ YR++ +G PD +T+ + +CA
Sbjct: 82 FLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 141
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
IG G +H + K+GL D+++ +SL+ +Y C A K+FDE+ RD VSW S+I
Sbjct: 142 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 201
Query: 183 AGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK 239
+GY+ AG +A+ +F M EP+ T VS+L C G+LR GR + + +
Sbjct: 202 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 261
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
+S + L+ MY KC L A+++F+++ KKD V+WT++I+ Q + E+ LF +M
Sbjct: 262 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 321
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+G+ PD L++VLSAC +VG L+ G+ + + +++ +I++ T +VDMY KCG +
Sbjct: 322 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 381
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
E AL+ F MP KN TWNA++ A G AL F+ M P+++TF+ +L+AC
Sbjct: 382 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 438
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVL 479
H+GLV +G +YF++M S + L P++EHY + DLL RAG+LDEA + P PD +
Sbjct: 439 VHAGLVHQGCRYFHEM-SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 497
Query: 480 ILGALLSACKDKGILKLPTRYTR 502
+L A+L AC + + + + R
Sbjct: 498 MLAAILGACHKRKDVAIREKAMR 520
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 318 bits (816), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 283/510 (55%), Gaps = 44/510 (8%)
Query: 19 CNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFF----GKSVDFVDFGCGFLKQCDWRVSS 74
C FK++H+Q +T G+ N K++ F+ G V + + + D V
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV-- 101
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG-IGEGMQIHG 133
+N++I ++ D + Y +++ G PDS+TFP +L G + G ++H
Sbjct: 102 --WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
V+K GL +LYVQN+LV +Y +C A VFD DV SW +I+GY R ++E
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEE 219
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
++ + + M V P + T + +L C + + + +R+H + + ++ SL NAL++
Sbjct: 220 SIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN 279
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ-----------CQRP---------- 289
Y C + A +IF + +D++SWTSI+ G V+ Q P
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 290 ----------KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ESL +FR+M S+G+ PD + SVL+ACA++G L+ G W+ YID+ I
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
K D+ +G A++DMY KCGC E+A + F++M ++ FTW A++ GLA +G+G A+K F +
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M P+++T+L +L+AC HSG+VD+ RK+F +M S + + P L HYGCM D+L RA
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS-DHRIEPSLVHYGCMVDMLGRA 518
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACK 489
GL+ EA ++R MPM P+ ++ GALL A +
Sbjct: 519 GLVKEAYEILRKMPMNPNSIVWGALLGASR 548
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 275/494 (55%), Gaps = 17/494 (3%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVD--FGCGFLKQCD 69
+L + C +L ++H ++ S ++RN + + R++DF + ++ + + D
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
S + +NS+I Y+ S P A++ Y++++R G+ PD +TFP +LK+C+ I G
Sbjct: 69 CP-SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
+HG V+K G ++YV L+H+Y C + +VF+++P +VV+W S+I+G+
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 190 LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
F +A+ F M V+ N V LLV CGR + F+ ++ +
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDP---------YFQSKVGFNVILAT 238
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+DMY KC L A+ +F +P++ +VSW SII+G Q +E+L +F M GI P
Sbjct: 239 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP 298
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D V SV+ A G G+ +H Y+ + +D I A+V+MYAK G E A + F
Sbjct: 299 DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 358
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG-STPNEVTFLAILTACCHSGLV 425
++ K+ W ++ GLA HG G AL F+ M +G +TP+ +T+L +L AC H GLV
Sbjct: 359 EDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLV 418
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
++G++YF +M + L P +EHYGCM D+L RAG +EA LV+TMP+ P+V I GALL
Sbjct: 419 EEGQRYFAEM-RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 477
Query: 486 SACKDKGILKLPTR 499
+ C L+L R
Sbjct: 478 NGCDIHENLELTDR 491
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 268/487 (55%), Gaps = 25/487 (5%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C L+ KKIH QLV N +V+ ++D + K CG +K
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDMYAK--------CGEIKSAHKVF 199
Query: 73 SSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG 126
+ + S+I+ Y +D + ++ + ++ N L + YT+ ++ +C +
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+G HG ++K G+ + SL+ +Y C D +A +VF+E D+V WT++I GY
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 187 RAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
G +EA+++F M ++PN T S+L GCG NL +GR +HGL K
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK-VGIWDTN 378
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+NAL+ MY KC +AK +F +KDIV+W SIISG Q E+L LF +M+S
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES 438
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI--KRDIHIGTAMVDMYAKCGCIER 361
+ P+GV + S+ SACA++G L G +H Y + +H+GTA++D YAKCG +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 362 ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
A F+ + KN TW+A++ G G +L+ FEEM+ + PNE TF +IL+AC H
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGH 558
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
+G+V++G+KYF+ M + YN +P +HY CM D+L RAG L++AL ++ MP+ PDV
Sbjct: 559 TGMVNEGKKYFSSMY-KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 482 GALLSAC 488
GA L C
Sbjct: 618 GAFLHGC 624
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 212/417 (50%), Gaps = 19/417 (4%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
+ +C N+ S ++ H L +G++ + + ++V +G F G+ K
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYG----FF----GYTKDARLVFDQI 102
Query: 76 P------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
P + ++ Y + + Y ++++GF D F LK+C + G
Sbjct: 103 PEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGK 162
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
+IH ++K+ D V L+ +Y C + +SA KVF+++ +R+VV WTS+IAGY +
Sbjct: 163 KIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
L +E + +F M NV N T+ +L++ C + L G+ HG + K ++S
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+DMYVKC +S A+++F+E D+V WT++I G E+L LF+KM I+P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ V + SVLS C + +L+ GR VH + I D ++ A+V MYAKC A F
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
K+I WN++++G + +G + AL F M E TPN VT ++ +AC G
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 7/301 (2%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
Q HG++ GL+ D+ + LV LYG + A VFD++P D W ++ Y
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 190 LFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
E V ++ + + F L C +L G++IH + K S ++ +
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT- 180
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
L+DMY KC + A ++F+++ +++V WTS+I+G V+ +E LVLF +M + +
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ +++ AC + L G+W H + + I+ + T+++DMY KCG I A + F
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
NE ++ W A++ G +G AL F++M G PN VT ++L+ C GL++
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
Query: 427 K 427
Sbjct: 358 N 358
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
N+ R+ HG++ + + L+ +Y +A+ +F ++P+ D W ++
Sbjct: 56 NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
+ E + L+ + G D ++ + L AC + DLD G+ +H + +
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL-VKVPSF 174
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
D + T ++DMYAKCG I+ A + FN++ +N+ W +++ G + L F M
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
NE T+ ++ AC + +G+ + ++ LS
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
+LS C N+ L R H + + DI I T +V +Y G + A F+++P +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
+ W +L ++ +K ++ ++ G +++ F L AC +D G+K
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 434 QMI 436
Q++
Sbjct: 167 QLV 169
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 272/491 (55%), Gaps = 55/491 (11%)
Query: 17 RRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP 76
+ C N+++ K+IHA +V +G++ N VV ++ SV G LK P
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP------GALKYAHKLFDEIP 73
Query: 77 F------NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
N ++ A S +P+ + Y ++ + G PD YTF +LK+C+ G
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
HG V++ G V + YV+N+L+ + C D A ++FD+ V+W+S+ +GYA+ G
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGK 193
Query: 191 FDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
DEA+ +F M + A V ++ GC
Sbjct: 194 IDEAMRLFDEMPYKDQVAWNV-MITGC--------------------------------- 219
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
+KC+ + A+++F +KD+V+W ++ISG V C PKE+L +F++M +G PD V
Sbjct: 220 --LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 277
Query: 311 LTSVLSACANVGDLDYGRWVHEYI-DRRAIKRDIHIGT----AMVDMYAKCGCIERALQT 365
+ S+LSACA +GDL+ G+ +H YI + ++ I++GT A++DMYAKCG I+RA++
Sbjct: 278 ILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV 337
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F + +++ TWN L+ GLA+H +++ FEEM PNEVTF+ ++ AC HSG V
Sbjct: 338 FRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRV 396
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
D+GRKYF+ ++ YN+ P ++HYGCM D+L RAG L+EA M V +M + P+ ++ LL
Sbjct: 397 DEGRKYFS-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Query: 486 SACKDKGILKL 496
ACK G ++L
Sbjct: 456 GACKIYGNVEL 466
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
L A ++F E+PK D+ ++ G Q +P++++ L+ +M G+ PD T VL
Sbjct: 61 ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT 376
AC+ + G H + R + ++ A++ +A CG + A + F++ +
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVA 180
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
W+++ +G A G+ A++ F+EM ++V + ++T C +D R+ F++
Sbjct: 181 WSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRFT 236
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSACKDKGI 493
+ + + M G EAL + + M A PDV+ + +LLSAC G
Sbjct: 237 EKD------VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 494 LKLPTR 499
L+ R
Sbjct: 291 LETGKR 296
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 275/473 (58%), Gaps = 15/473 (3%)
Query: 25 FKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQC--DW-RVSSFPFNSLI 81
K+IHA+L+ G+ + ++ +++ S F D F +Q D R FP+N++I
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIH---ASSSFGDIT--FARQVFDDLPRPQIFPWNAII 91
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
Y+ ++ Q A+L Y + PDS+TFP +LK+C+ + G +H V ++G
Sbjct: 92 RGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFD 151
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV--RDVVSWTSIIAGYARAGLFDEAVTMFL 199
D++VQN L+ LY C SA VF+ +P+ R +VSWT+I++ YA+ G EA+ +F
Sbjct: 152 ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 200 SM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M +V+P+ VS+L +L+ GR IH + K ++ + +L MY KC
Sbjct: 212 QMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCG 271
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
++ AK +F ++ +++ W ++ISG + +E++ +F +M + + PD + +TS +S
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT 376
ACA VG L+ R ++EY+ R + D+ I +A++DM+AKCG +E A F+ +++
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
W+A++ G +HGR A+ + M G PN+VTFL +L AC HSG+V +G +FN+M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ N P+ +HY C+ DLL RAG LD+A +++ MP+ P V + GALLSACK
Sbjct: 452 DHKIN--PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 260/430 (60%), Gaps = 8/430 (1%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRN---GFLPDSYTFPAMLKSCAMFLGIGEGM 129
+++ +++++S YA R + AI + +R G D Y F A+L S A + +G G
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGR 241
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
QIH I IK GL+ + + N+LV +Y C+ A K+FD R+ ++W++++ GY++ G
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 190 LFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
EAV +F S ++P+ T V +L C L G+++H + K + L A+
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
AL+DMY K CL++A++ F L ++D+ WTS+ISG VQ +E+L+L+R+M ++GI P
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ + SVL AC+++ L+ G+ VH + + ++ IG+A+ MY+KCG +E F
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
P K++ +WNA+++GL+ +G+G AL+ FEEM+ EG P++VTF+ I++AC H G V+
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLS 486
+G YFN M+S Q L P+++HY CM DLL RAG L EA + + + + + LLS
Sbjct: 542 RGWFYFN-MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Query: 487 ACKDKGILKL 496
ACK+ G +L
Sbjct: 601 ACKNHGKCEL 610
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 248/529 (46%), Gaps = 54/529 (10%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
L + + NL + + +H Q++ +G +V+F+ K CG L +
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAK--------CGKLAKAHSIF 72
Query: 73 SSF------PFNSLISSYA---GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
++ +NSLI+ Y+ G + +R++ LP++YT + K+ +
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQ 132
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
G Q H +V+KM D+YV SLV +Y KVF MP R+ +W+++++
Sbjct: 133 SSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 184 GYARAGLFDEAV---TMFLSMNVEPNTA--TFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
GYA G +EA+ +FL E + + F ++L + + +GR+IH + K
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+ SNAL+ MY KCE L+EA ++F ++ ++W+++++G Q E++ LF +
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M S+GI+P + VL+AC+++ L+ G+ +H ++ + +R + TA+VDMYAK GC
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
+ A + F+ + +++ W +L++G + AL + M G PN+ T ++L A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 419 CCHSGLVDKGRKYFNQMISQQYNL---------------------------SPRLE--HY 449
C ++ G++ I + L +P + +
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 450 GCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILK 495
M L G DEAL L M M PD + ++SAC KG ++
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 124/234 (52%), Gaps = 5/234 (2%)
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
+ P+T+T + L + NL GR +HG I + + ++ +N L++ Y KC L++A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKES---LVLFRKMHSSGIEPDGVILTSVLSAC 318
IF+ + KD+VSW S+I+G Q S + LFR+M + I P+ L + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
+++ GR H + + + DI++ T++V MY K G +E L+ F MP +N +TW+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 379 ALLNGLAMHGRGYAALKFFEEMV--GEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+++G A GR A+K F + E + ++ F A+L++ + V GR+
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 254/420 (60%), Gaps = 9/420 (2%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSCAMFLGIGEGM 129
R SF NS+I +Y + + + YR + + F PD++TF + KSC++ + + +G+
Sbjct: 39 RDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGL 98
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
Q+H + + G D+YV +V +Y A FDEMP R VSWT++I+GY R G
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 190 LFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
D A +F M + + +++ G +SG++ RR+ F + ++ ++
Sbjct: 159 ELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL----FDEMTHKTVITWTTMI 214
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH-SSGIEPDG 308
Y + + A+++F +P++++VSW ++I G Q ++P+E + LF++M ++ ++PD
Sbjct: 215 HGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDD 274
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
V + SVL A ++ G L G W H ++ R+ + + + + TA++DMY+KCG IE+A + F+E
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE 334
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
MP K + +WNA+++G A++G AAL F M+ E P+E+T LA++TAC H GLV++G
Sbjct: 335 MPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEG 393
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
RK+F+ M ++ L+ ++EHYGCM DLL RAG L EA L+ MP P+ +IL + LSAC
Sbjct: 394 RKWFHVM--REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSAC 451
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 251/410 (61%), Gaps = 4/410 (0%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A+ + ++ +G PD FP++LKSC M + + G +HG ++++G+ CDLY N+L++
Sbjct: 89 ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148
Query: 153 LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTAT 209
+Y S +VF+ MP +DVVS+ +IIAGYA++G++++A+ M M +++P++ T
Sbjct: 149 MYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 208
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
S+L ++ G+ IHG + ++ + ++L+DMY K + +++++F L
Sbjct: 209 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 268
Query: 270 KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
+D +SW S+++G VQ R E+L LFR+M ++ ++P V +SV+ ACA++ L G+
Sbjct: 269 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 328
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR 389
+H Y+ R +I I +A+VDMY+KCG I+ A + F+ M + +W A++ G A+HG
Sbjct: 329 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 388
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
G+ A+ FEEM +G PN+V F+A+LTAC H GLVD+ YFN M ++ Y L+ LEHY
Sbjct: 389 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM-TKVYGLNQELEHY 447
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
+ DLL RAG L+EA + M + P + LLS+C L+L +
Sbjct: 448 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 497
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 148/267 (55%), Gaps = 3/267 (1%)
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNL 223
F + V++W S+I + LF +A+ F+ M P+ F S+L C +L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
R G +HG I + L NALM+MY K + +++F +P+KD+VS+ +II+G
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGY 181
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
Q +++L + R+M ++ ++PD L+SVL + D+ G+ +H Y+ R+ I D+
Sbjct: 182 AQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDV 241
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+IG+++VDMYAK IE + + F+ + C++ +WN+L+ G +GR AL+ F +MV
Sbjct: 242 YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 301
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRK 430
P V F +++ AC H + G++
Sbjct: 302 KVKPGAVAFSSVIPACAHLATLHLGKQ 328
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 150/318 (47%), Gaps = 50/318 (15%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLK-QCDWRVSSFPFNSLISSY 84
K+IH ++ GI + + +VD + KS D F + C +S +NSL++ Y
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS---WNSLVAGY 282
Query: 85 AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDL 144
+ R A+ +RQ+V P + F +++ +CA + G Q+HG V++ G ++
Sbjct: 283 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 342
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-- 202
++ ++LV +Y C + ++A K+FD M V D VSWT+II G+A G EAV++F M
Sbjct: 343 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402
Query: 203 -VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
V+PN FV++L C G L+D EA
Sbjct: 403 GVKPNQVAFVAVLTACSHVG--------------------------LVD---------EA 427
Query: 262 KQIFHELPK-----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
F+ + K +++ + ++ L + + +E+ KM +EP G + +++LS
Sbjct: 428 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLS 484
Query: 317 ACANVGDLDYGRWVHEYI 334
+C+ +L+ V E I
Sbjct: 485 SCSVHKNLELAEKVAEKI 502
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 32/295 (10%)
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
F R +S +++ ++ +Y + L EA +F L +++W S+I ++L
Sbjct: 31 FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKAL 90
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
F +M +SG PD + SVL +C + DL +G VH +I R + D++ G A+++MY
Sbjct: 91 ASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMY 150
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
AK ++ + F MP K++ ++N ++ G A G AL+ EM P+ T
Sbjct: 151 AKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 210
Query: 414 AILTACCHSGLVDKGRK--------------YFNQMISQQYNLSPRLEHYG-CMTDLLCR 458
++L V KG++ Y + Y S R+E + L CR
Sbjct: 211 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 270
Query: 459 AGL--------------LDEALMLVRTMPMA---PDVLILGALLSACKDKGILKL 496
G+ +EAL L R M A P + +++ AC L L
Sbjct: 271 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 325
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 276/534 (51%), Gaps = 71/534 (13%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVD-----------------------FGC 62
+ +HA ++ SG + R++D + K D
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 63 GFLKQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAML 116
GFL + D S P +NS++S +A DR + A+ + + + GF+ + Y+F ++L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
+C+ + +G+Q+H ++ K + D+Y+ ++LV +Y C + A +VFDEM R+VV
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 177 SWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
SW S+I + + G EA+ +F L VEP+ T S++ C +++G+ +HG +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 234 FKRAS-KVSLEASNALMDMYVKCECLSEAKQIFHELP----------------------- 269
K + + SNA +DMY KC + EA+ IF +P
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 270 --------KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
++++VSW ++I+G Q +E+L LF + + P ++L ACA++
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 322 GDLDYGRWVHEYIDRRAIK------RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
+L G H ++ + K DI +G +++DMY KCGC+E F +M ++
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+WNA++ G A +G G AL+ F EM+ G P+ +T + +L+AC H+G V++GR YF+ M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
++ + ++P +HY CM DLL RAG L+EA ++ MPM PD +I G+LL+ACK
Sbjct: 520 -TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 198/456 (43%), Gaps = 82/456 (17%)
Query: 106 LPDSYTFPAMLKSC------AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDD 159
DS F +L SC A+++ +H VIK G ++++QN L+ Y C
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYV-----RYVHASVIKSGFSNEIFIQNRLIDAYSKCGS 70
Query: 160 CRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP-------------- 205
+VFD+MP R++ +W S++ G + G DEA ++F SM
Sbjct: 71 LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 206 --------------------NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
N +F S+L C ++ G ++H LI K +
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+AL+DMY KC +++A+++F E+ +++VSW S+I+ Q E+L +F+ M S +E
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 306 PDGVILTSVLSACANVGDLDYGRWVH-EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
PD V L SV+SACA++ + G+ VH + ++ DI + A VDMYAKC I+ A
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 365 TFNEMPCKNIF-------------------------------TWNALLNGLAMHGRGYAA 393
F+ MP +N+ +WNAL+ G +G A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 394 LKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY---- 449
L F + E P +F IL AC + G + ++ + E
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+ D+ + G ++E ++ R M M D + A++
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 60/324 (18%)
Query: 11 VLLDYIRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRV-VDFFGKSVDFVDFGCGFLK 66
L I C +L + K ++H ++V + +RND+++ VD + K C +K
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK--------CSRIK 306
Query: 67 QCDWRVSSFP-------------------------------------FNSLISSYAGSDR 89
+ + S P +N+LI+ Y +
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 90 PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVC------D 143
+ A+ + + R P Y+F +LK+CA + GMQ H V+K G D
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM-- 201
++V NSL+ +Y C VF +M RD VSW ++I G+A+ G +EA+ +F M
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 202 -NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSL-EASNALMDMYVKCECLS 259
+P+ T + +L CG +G + GR + + L + ++D+ + L
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 260 EAKQIFHELP-KKDIVSWTSIISG 282
EAK + E+P + D V W S+++
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAA 570
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 294 bits (753), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 281/527 (53%), Gaps = 49/527 (9%)
Query: 4 IRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSV-DFVDFGC 62
++LN + ++L + CN+ FK++ AQ++ ++ + + R++ F + + +D
Sbjct: 31 LQLNHQSLVL--LENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAK 88
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
+ F +N++IS+ + S + Y ++R+ PD TF ++K+ +
Sbjct: 89 LLFLNFTPNPNVFVYNTMISAVSSSKNECFGL--YSSMIRHRVSPDRQTFLYLMKASSF- 145
Query: 123 LGIGEGMQIHGIVIKMG-LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSI 181
+ E QIH +I G L Y+ NSLV Y + A KVF MP DV S+ +
Sbjct: 146 --LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 182 IAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
I GYA+ G EA+ ++ M +EP+ T +SLLV CG ++R+G+ +HG I +R
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 239 KVS--LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC---------- 286
S L SNAL+DMY KC+ AK+ F + KKD+ SW +++ G V+
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 287 -QRPKESLV---------------------LFRKMH-SSGIEPDGVILTSVLSACANVGD 323
Q PK LV LF +M ++PD V + S++S AN G+
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 324 LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG 383
L +GRWVH + R +K D + +A++DMY KCG IERA F K++ W +++ G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
LA HG G AL+ F M EG TPN VT LA+LTAC HSGLV++G FN M ++
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM-KDKFGFD 502
Query: 444 PRLEHYGCMTDLLCRAGLLDEALMLV-RTMPMAPDVLILGALLSACK 489
P EHYG + DLLCRAG ++EA +V + MPM P + G++LSAC+
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACR 549
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 243/438 (55%), Gaps = 48/438 (10%)
Query: 61 GCGFLKQCDWRVSS---------FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYT 111
C K+ D VS+ F +N+L + P ++ Y +++R+ P SYT
Sbjct: 69 ACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYT 128
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
+ +++K+ + GE +Q H + K G + +Q +L+ Y R A KVFDEMP
Sbjct: 129 YSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 186
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
RD ++WT++++ Y R D A ++ M+ E N AT
Sbjct: 187 ERDDIAWTTMVSAYRRVLDMDSANSLANQMS-EKNEAT---------------------- 223
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
SN L++ Y+ L +A+ +F+++P KDI+SWT++I G Q +R +E
Sbjct: 224 -------------SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 270
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD 351
++ +F KM GI PD V +++V+SACA++G L+ G+ VH Y + D++IG+A+VD
Sbjct: 271 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 330
Query: 352 MYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
MY+KCG +ERAL F +P KN+F WN+++ GLA HG ALK F +M E PN VT
Sbjct: 331 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 390
Query: 412 FLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT 471
F+++ TAC H+GLVD+GR+ + MI Y++ +EHYG M L +AGL+ EAL L+
Sbjct: 391 FVSVFTACTHAGLVDEGRRIYRSMI-DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 449
Query: 472 MPMAPDVLILGALLSACK 489
M P+ +I GALL C+
Sbjct: 450 MEFEPNAVIWGALLDGCR 467
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 132/247 (53%), Gaps = 5/247 (2%)
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE- 204
N L++ Y + A +F++MPV+D++SWT++I GY++ + EA+ +F M E
Sbjct: 223 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
P+ T +++ C G L +G+ +H + + + +AL+DMY KC L A
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 342
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
+F LPKK++ W SII GL +E+L +F KM ++P+ V SV +AC + G
Sbjct: 343 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 402
Query: 323 DLDYGRWVH-EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNAL 380
+D GR ++ ID +I ++ MV +++K G I AL+ M + N W AL
Sbjct: 403 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 462
Query: 381 LNGLAMH 387
L+G +H
Sbjct: 463 LDGCRIH 469
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 70/301 (23%)
Query: 239 KVSLEASNALMDMYVKC----ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
K SL LM+ ++ + L A ++ + ++ + ++ G V C P SL
Sbjct: 53 KTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 112
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA 354
L+ +M + P +S++ A + +G + +I + + I T ++D Y+
Sbjct: 113 LYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYS 170
Query: 355 KCGCIERALQTFNEMPCKNIFTW-------------------------------NALLNG 383
G I A + F+EMP ++ W N L+NG
Sbjct: 171 ATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLING 230
Query: 384 LAMHG------------------------RGYA-------ALKFFEEMVGEGSTPNEVTF 412
G +GY+ A+ F +M+ EG P+EVT
Sbjct: 231 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 290
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+++AC H G+++ G++ M + Q + + D+ + G L+ AL++ +
Sbjct: 291 STVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNL 348
Query: 473 P 473
P
Sbjct: 349 P 349
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 266/499 (53%), Gaps = 30/499 (6%)
Query: 16 IRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
+R C L + ++HA + S + +V +D + K + D F +
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 305
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S+ N++I+ Y+ + A+L + +++ +G D + + ++CA+ G+ EG+QI+
Sbjct: 306 QSY--NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 363
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
G+ IK L D+ V N+ + +YG C A +VFDEM RD VSW +IIA + + G
Sbjct: 364 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 423
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
E + +F+SM +EP+ TF S+L C G+L G IH I K + +L+
Sbjct: 424 ETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLI 482
Query: 250 DMYVKCECLSEAKQI-------------FHELPK-------KDIVSWTSIISGLVQCQRP 289
DMY KC + EA++I EL K + VSW SIISG V ++
Sbjct: 483 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 542
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
+++ +LF +M GI PD +VL CAN+ G+ +H + ++ ++ D++I + +
Sbjct: 543 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTL 602
Query: 350 VDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
VDMY+KCG + + F + ++ TWNA++ G A HG+G A++ FE M+ E PN
Sbjct: 603 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 662
Query: 410 VTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
VTF++IL AC H GL+DKG +YF M+ + Y L P+L HY M D+L ++G + AL L+
Sbjct: 663 VTFISILRACAHMGLIDKGLEYF-YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 721
Query: 470 RTMPMAPDVLILGALLSAC 488
R MP D +I LL C
Sbjct: 722 REMPFEADDVIWRTLLGVC 740
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 224/473 (47%), Gaps = 37/473 (7%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGC------------------GFLKQ 67
K+ HA ++ SG V+ ++ + S DFV G+ K
Sbjct: 26 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 85
Query: 68 CD-WRVSSF----------PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAML 116
D ++ +SF +NS++S Y + +I + + R G D TF +L
Sbjct: 86 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 145
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
K C+ GMQIHGIV+++G D+ ++L+ +Y + +VF +P ++ V
Sbjct: 146 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 205
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
SW++IIAG + L A+ F M N + + + S+L C LR+G ++H
Sbjct: 206 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 265
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
K A +DMY KC+ + +A+ +F + S+ ++I+G Q + ++L
Sbjct: 266 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 325
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
+LF ++ SSG+ D + L+ V ACA V L G ++ + ++ D+ + A +DMY
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 385
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
KC + A + F+EM ++ +WNA++ +G+GY L F M+ P+E TF
Sbjct: 386 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 445
Query: 414 AILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC-MTDLLCRAGLLDEA 465
+IL AC G + G + + ++ + + GC + D+ + G+++EA
Sbjct: 446 SILKACT-GGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKCGMIEEA 494
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 34/358 (9%)
Query: 119 CAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSW 178
CA + G Q H +I G +V N L+ +Y D SA VFD+MP+RDVVSW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 179 TSIIAGYARAG-------LFD------------------------EAVTMFLSM---NVE 204
+I GY+++ F+ +++ +F+ M +E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
+ TF +L C + +G +IHG++ + + A++AL+DMY K + E+ ++
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
F +P+K+ VSW++II+G VQ +L F++M I SVL +CA + +L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
G +H + + D + TA +DMYAKC ++ A F+ N ++NA++ G
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
+ G+ AL F ++ G +E++ + AC + +G + + I +L
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 373
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 215 VGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIV 274
V C + G L +G++ H + + + N L+ +Y A +F ++P +D+V
Sbjct: 14 VECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 73
Query: 275 SWT-------------------------------SIISGLVQCQRPKESLVLFRKMHSSG 303
SW S++SG +Q +S+ +F M G
Sbjct: 74 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 133
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
IE DG +L C+ + D G +H + R D+ +A++DMYAK +L
Sbjct: 134 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
+ F +P KN +W+A++ G + ALKFF+EM + ++ + ++L +C
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 264/467 (56%), Gaps = 7/467 (1%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
++H +V SG+ + ++ + K F D F R + +N +IS Y
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS--RADTVTWNCMISGYVQ 317
Query: 87 SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYV 146
S + ++ + +++ +G LPD+ TF ++L S + F + QIH +++ + D+++
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 147 QNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNV 203
++L+ Y C A +F + DVV +T++I+GY GL+ +++ MF + + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 204 EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQ 263
PN T VS+L G L++GR +HG I K+ A++DMY KC ++ A +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 264 IFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
IF L K+DIVSW S+I+ Q P ++ +FR+M SGI D V +++ LSACAN+
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 324 LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG 383
+G+ +H ++ + ++ D++ + ++DMYAKCG ++ A+ F M KNI +WN+++
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 384 LAMHGRGYAALKFFEEMVGE-GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
HG+ +L F EMV + G P+++TFL I+++CCH G VD+G ++F M ++ Y +
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM-TEDYGI 676
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
P+ EHY C+ DL RAG L EA V++MP PD + G LL AC+
Sbjct: 677 QPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 209/411 (50%), Gaps = 7/411 (1%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+LL N L+ K++HA L+ + I + +R++ + F D G F +
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R S P+NS+ISS+ + A+ Y +++ G PD TFP ++K+C
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+ V +G+ C+ +V +SL+ Y K+FD + +D V W ++ GYA+ G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS-- 245
D + F M + PN TF +L C + +G ++HGL+ S V E S
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV--VSGVDFEGSIK 277
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
N+L+ MY KC +A ++F + + D V+W +ISG VQ +ESL F +M SSG+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
PD + +S+L + + +L+Y + +H YI R +I DI + +A++D Y KC + A
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
F++ ++ + A+++G +G +L+ F +V +PNE+T ++IL
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
L+ +L AC+N L G+ VH ++ +I D + ++ MYA CG + F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 371 CK--NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ +I WN++++ +G AL F+ +M+ G +P+ TF ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 250/418 (59%), Gaps = 7/418 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ ++I+ YA S+ A C+ ++V+ G P+ +T ++LKSC + G +HG+V+
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 137 KMGLVCDLYVQNSLVHLYGVCD-DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
K+G+ LYV N+++++Y C +A +F ++ V++ V+WT++I G+ G +
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 196 TMFLSMNVEPNTATFVSLLVGCGRSGNL---RMGRRIHGLIFKRASKVSLEASNALMDMY 252
M+ M +E T + + S ++ G++IH + KR + +L N+++D+Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
+C LSEAK FHE+ KD+++W ++IS L + E+L++F++ S G P+ T
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFT 317
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM-PC 371
S+++ACAN+ L+ G+ +H I RR +++ + A++DMYAKCG I + + F E+
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+N+ +W +++ G HG G A++ F++MV G P+ + F+A+L+AC H+GLV+KG KY
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKY 437
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
FN M S +Y ++P + Y C+ DLL RAG + EA LV MP PD GA+L ACK
Sbjct: 438 FNVMES-EYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACK 494
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 45/385 (11%)
Query: 155 GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFV 211
G+ ++ RS +FDEMP RDVV+WT++I GYA + A F M PN T
Sbjct: 59 GLVEEARS---LFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLS 115
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK-QIFHELPK 270
S+L C L G +HG++ K + SL NA+M+MY C EA IF ++
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKV 175
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
K+ V+WT++I+G L ++++M E +T + A A++ + G+ +
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQI 235
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
H + +R + ++ + +++D+Y +CG + A F+EM K++ TWN L++ L
Sbjct: 236 HASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDS 294
Query: 391 YAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYG 450
AL F+ +G PN TF +++ AC + ++ G++ ++ + +N + L +
Sbjct: 295 SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN-- 352
Query: 451 CMTDLLCRAG-----------LLD---------------------EALMLVRTM---PMA 475
+ D+ + G ++D EA+ L M +
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 476 PDVLILGALLSACKDKGILKLPTRY 500
PD ++ A+LSAC+ G+++ +Y
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKY 437
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 11/255 (4%)
Query: 236 RASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVL 295
+ K + A+N ++ + K + EA+ +F E+P +D+V+WT++I+G +
Sbjct: 40 KPKKHHILATNLIVSYFEKG-LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98
Query: 296 FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
F +M G P+ L+SVL +C N+ L YG VH + + ++ +++ AM++MYA
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 356 CG-CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
C +E A F ++ KN TW L+ G G G LK +++M+ E + EVT
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA---EVTPYC 215
Query: 415 ILTACCHSGLVDK---GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT 471
I A S +D G++ +I + + L + DL CR G L EA
Sbjct: 216 ITIAVRASASIDSVTTGKQIHASVIKRGFQ--SNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 472 MPMAPDVLILGALLS 486
M D++ L+S
Sbjct: 274 ME-DKDLITWNTLIS 287
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 289 bits (740), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 275/485 (56%), Gaps = 23/485 (4%)
Query: 16 IRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ---CD 69
++ CN + SF + HA +V SG+ + V ++ + K G G + D
Sbjct: 68 LQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK------LGPGMRETRRVFD 121
Query: 70 WRV--SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGE 127
R + + S++S Y A+ + ++V G + +T + +K+C+ +
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
G HG+VI G + ++ ++L +LYGV + A +VFDEMP DV+ WT++++ +++
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 188 AGLFDEAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
L++EA+ +F +M+ + P+ +TF ++L CG L+ G+ IHG + ++
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++L+DMY KC + EA+Q+F+ + KK+ VSW++++ G Q ++++ +FR+M
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME--- 358
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
E D +VL ACA + + G+ +H RR ++ + +A++D+Y K GCI+ A
Sbjct: 359 -EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
+ +++M +N+ TWNA+L+ LA +GRG A+ FF +MV +G P+ ++F+AILTAC H+G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 424 LVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGA 483
+VD+GR YF ++++ Y + P EHY CM DLL RAGL +EA L+ D + G
Sbjct: 478 MVDEGRNYF-VLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 484 LLSAC 488
LL C
Sbjct: 537 LLGPC 541
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 195/386 (50%), Gaps = 12/386 (3%)
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLY-GVCDDCRSAGKVFDEM 170
+ ++L++C G+Q H V+K GL D V NSL+ LY + R +VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGR 227
V+D +SWTS+++GY +A+ +F+ M ++ N T S + C G +R+GR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQ 287
HG++ + + S+ L +Y +A+++F E+P+ D++ WT+++S +
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 288 RPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
+E+L LF MH G+ PDG +VL+AC N+ L G+ +H + I ++ +
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
++++DMY KCG + A Q FN M KN +W+ALL G +G A++ F EM
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EE 359
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
+ F +L AC V G++ Q + + + +E + DL ++G +D A
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE--SALIDLYGKSGCIDSAS 417
Query: 467 MLVRTMPMAPDVLILGALLSACKDKG 492
+ M + +++ A+LSA G
Sbjct: 418 RVYSKMSI-RNMITWNAMLSALAQNG 442
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 143/309 (46%), Gaps = 7/309 (2%)
Query: 187 RAGLFDEAVTMFLSMNVEPNTAT---FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ G EA+ + S + AT + SLL C + + G + H + K +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 244 ASNALMDMYVKC-ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
N+L+ +Y K + E +++F KD +SWTS++SG V + ++L +F +M S
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G++ + L+S + AC+ +G++ GR H + + + I + + +Y A
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM-VGEGSTPNEVTFLAILTACCH 421
+ F+EMP ++ W A+L+ + + AL F M G+G P+ TF +LTAC +
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
+ +G++ ++I+ + +E + D+ + G + EA + M V
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVE--SSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 482 GALLSACKD 490
L C++
Sbjct: 336 ALLGGYCQN 344
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 265/487 (54%), Gaps = 22/487 (4%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP----- 76
L+ K+IHA ++ G+ + ++ ++D + K CG + + P
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVK--------CGRVIAAHKLFNGMPNKNII 316
Query: 77 -FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ +L+S Y + + A+ + + + G PD Y ++L SCA +G G Q+H
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL---FD 192
IK L D YV NSL+ +Y CD A KVFD DVV + ++I GY+R G
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EA+ +F M + P+ TFVSLL +L + ++IHGL+FK + + A +AL+
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
D+Y C CL +++ +F E+ KD+V W S+ +G VQ +E+L LF ++ S PD
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
++++A N+ + G+ H + +R ++ + +I A++DMYAKCG E A + F+
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
+++ WN++++ A HG G AL+ E+M+ EG PN +TF+ +L+AC H+GLV+ G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
K F M+ ++ + P EHY CM LL RAG L++A L+ MP P ++ +LLS C
Sbjct: 677 KQFELML--RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 490 DKGILKL 496
G ++L
Sbjct: 735 KAGNVEL 741
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 237/470 (50%), Gaps = 19/470 (4%)
Query: 9 KWVLLDYIRRCNNLKS-----FKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVDFVDFG 61
+++L +I+ C+ L ++ + LV SG R+ V ++DF+ K ++D+
Sbjct: 146 EYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 62 CGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAM 121
L + S+ + ++IS R +++ + Q++ + +PD Y +L +C++
Sbjct: 206 FDALPE----KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 122 FLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSI 181
+ G QIH +++ GL D + N L+ Y C +A K+F+ MP ++++SWT++
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 182 IAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
++GY + L EA+ +F SM+ ++P+ S+L C L G ++H K
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRP---KESLVL 295
+N+L+DMY KC+CL++A+++F D+V + ++I G + E+L +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 296 FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
FR M I P + S+L A A++ L + +H + + + DI G+A++D+Y+
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 356 CGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAI 415
C C++ + F+EM K++ WN++ G AL F E+ P+E TF +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 416 LTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
+TA + V G+++ Q++ + +P + + + D+ + G ++A
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDA 609
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 158/296 (53%), Gaps = 6/296 (2%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+HG +I GL D Y+ N L++LY A KVF++MP R++VSW+++++ G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 191 FDEAVTMFLSM----NVEPNTATFVSLLVGC-GRSGNLR-MGRRIHGLIFKRASKVSLEA 244
++E++ +FL PN S + C G G R M ++ + K +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
L+D Y+K + A+ +F LP+K V+WT++ISG V+ R SL LF ++ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
PDG IL++VLSAC+ + L+ G+ +H +I R ++ D + ++D Y KCG + A +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 365 TFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
FN MP KNI +W LL+G + A++ F M G P+ +ILT+C
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 170/320 (53%), Gaps = 8/320 (2%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGM--QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAG 164
P+ Y + +++C+ G G M Q+ ++K G D+YV L+ Y + A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 165 KVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSG 221
VFD +P + V+WT++I+G + G ++ +F + NV P+ ++L C
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
L G++IH I + ++ N L+D YVKC + A ++F+ +P K+I+SWT+++S
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G Q KE++ LF M G++PD +S+L++CA++ L +G VH Y + +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY---AALKFFE 398
D ++ +++DMYAKC C+ A + F+ ++ +NA++ G + G + AL F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 399 EMVGEGSTPNEVTFLAILTA 418
+M P+ +TF+++L A
Sbjct: 444 DMRFRLIRPSLLTFVSLLRA 463
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 259/492 (52%), Gaps = 6/492 (1%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
V+L + +N+ + +HA V + ++ + V ++D + K V +D C + +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY-KRVGKIDKSCRVFSEMPF 171
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R ++ + ++I+ + R + + + ++ R+ L D+YTF LK+CA + G
Sbjct: 172 R-NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IH VI G V L V NSL +Y C + + +F+ M RDVVSWTS+I Y R G
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+AV F+ M V PN TF S+ C L G ++H + SL SN+
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
+M MY C L A +F + +DI+SW++II G Q +E F M SG +P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
L S+LS N+ ++ GR VH ++++ + +++++MY+KCG I+ A F
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
E +I + A++NG A HG+ A+ FE+ + G P+ VTF+++LTAC HSG +D
Sbjct: 471 ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G YFN M+ + YN+ P EHYGCM DLLCRAG L +A ++ M D ++ LL A
Sbjct: 531 GFHYFN-MMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA 589
Query: 488 CKDKGILKLPTR 499
CK KG ++ R
Sbjct: 590 CKAKGDIERGRR 601
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 204/425 (48%), Gaps = 8/425 (1%)
Query: 76 PFNSLISSYAGSDRPQIAILCYR--QIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ S+I Y ++ A++ + ++V + PD+ +LK+C I G +H
Sbjct: 73 SWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHA 132
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+K L+ +YV +SL+ +Y + +VF EMP R+ V+WT+II G AG + E
Sbjct: 133 YAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKE 192
Query: 194 AVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
+T F M+ +T TF L C ++ G+ IH + R +L +N+L
Sbjct: 193 GLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLAT 252
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY +C + + +F + ++D+VSWTS+I + + +++ F KM +S + P+
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
S+ SACA++ L +G +H + + + + +M+ MY+ CG + A F M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
C++I +W+ ++ G G G K+F M G+ P + ++L+ + +++ GR+
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKD 490
++ + L + ++ + G + EA M+ D++ L A+++ +
Sbjct: 433 V--HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR-DDIVSLTAMINGYAE 489
Query: 491 KGILK 495
G K
Sbjct: 490 HGKSK 494
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 143/266 (53%), Gaps = 5/266 (1%)
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV-----EPNTATFVSL 213
+ R+A +VFD+MP D+VSWTSII Y A DEA+ +F +M V P+T+ +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 214 LVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDI 273
L CG+S N+ G +H K + S+ ++L+DMY + + ++ ++F E+P ++
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 274 VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
V+WT+II+GLV R KE L F +M S D L ACA + + YG+ +H +
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
+ R + + ++ MY +CG ++ L F M +++ +W +L+ G+ A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 394 LKFFEEMVGEGSTPNEVTFLAILTAC 419
++ F +M PNE TF ++ +AC
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSAC 320
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 10/210 (4%)
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH--SSGIEPDGVILTSVL 315
L A+Q+F ++P DIVSWTSII V E+L+LF M + PD +L+ VL
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
AC ++ YG +H Y + ++ +++G++++DMY + G I+++ + F+EMP +N
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
TW A++ GL GR L +F EM + TF L AC V G+ +
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 436 ISQQY--------NLSPRLEHYGCMTDLLC 457
I + + +L+ G M D LC
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLC 265
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 247/428 (57%), Gaps = 12/428 (2%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ SLIS A + A++ + ++ R G +P+ +TFP K+ A G QIH + +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 137 KMGLVCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
K G + D++V S +Y + DD R K+FDE+P R++ +W + I+ G E
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDAR---KLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 194 AVTMFLS---MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A+ F+ ++ PN+ TF + L C +L +G ++HGL+ + + N L+D
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
Y KC+ + ++ IF E+ K+ VSW S+++ VQ +++ VL+ + +E +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
++SVLSACA + L+ GR +H + + ++R I +G+A+VDMY KCGCIE + Q F+EMP
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMV--GEGSTPNEVTFLAILTACCHSGLVDKG 428
KN+ T N+L+ G A G+ AL FEEM G G TPN +TF+++L+AC +G V+ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
K F+ M S Y + P EHY C+ D+L RAG+++ A ++ MP+ P + + GAL +AC
Sbjct: 433 MKIFDSMRS-TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 489 KDKGILKL 496
+ G +L
Sbjct: 492 RMHGKPQL 499
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 9/291 (3%)
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE 204
++ N L+++Y D SA V P R+VVSWTS+I+G A+ G F A+ F M E
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 205 ---PNTATFVSLLVGCGRSGNLRM---GRRIHGLIFKRASKVSLEASNALMDMYVKCECL 258
PN TF +LR+ G++IH L K + + + DMY K
Sbjct: 103 GVVPNDFTFPCAFKAV---ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 259 SEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
+A+++F E+P++++ +W + IS V RP+E++ F + P+ + + L+AC
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
++ L+ G +H + R D+ + ++D Y KC I + F EM KN +W
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
+L+ + A + + ++ ++L+AC ++ GR
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKR-ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
LL + ++R+GR +H I K S +N L++MY K + A+ + P +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
++VSWTS+ISGL Q +LV F +M G+ P+ A A++ G+ +H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
+ D+ +G + DMY K + A + F+E+P +N+ TWNA ++ GR
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 392 AALKFFEEMVGEGSTPNEVTFLAILTAC 419
A++ F E PN +TF A L AC
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 145/328 (44%), Gaps = 29/328 (8%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGK-----SVDFVDFGCGFLKQCDWRVSSFPFNSLI 81
++H ++ SG + V ++DF+GK S + + G W SL+
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW-------CSLV 282
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
++Y + + A + Y + ++ + ++L +CA G+ G IH +K +
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
++V ++LV +YG C + + FDEMP +++V+ S+I GYA G D A+ +F M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 202 -----NVEPNTATFVSLLVGCGRSGNLRMGRRI-HGLIFKRASKVSLEASNALMDMYVKC 255
PN TFVSLL C R+G + G +I + + E + ++DM +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 256 ECLSEAKQIFHELPKKDIVS-WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG--VILT 312
+ A + ++P + +S W ++ + +P+ L+ + + G V+L+
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIK 340
+ +A GRW R +K
Sbjct: 523 NTFAAA--------GRWAEANTVREELK 542
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 247/471 (52%), Gaps = 15/471 (3%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGS 87
+HA L+ S + V VD F K + VD+ ++ R ++ +N+++S + S
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVK-CNSVDYAAKVFERMPERDAT-TWNAMLSGFCQS 131
Query: 88 DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQ 147
A +R++ N PDS T +++S + + +H + I++G+ + V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPV--RDVVSWTSIIAGYARAGLFDEAVTMF------L 199
N+ + YG C D SA VF+ + R VVSW S+ Y+ +F EA F L
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS---VFGEAFDAFGLYCLML 248
Query: 200 SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
+P+ +TF++L C L GR IH + +EA N + MY K E
Sbjct: 249 REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 260 EAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA 319
A+ +F + + VSWT +ISG + E+L LF M SG +PD V L S++S C
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 320 NVGDLDYGRWVHEYIDRRAIKRD-IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
G L+ G+W+ D KRD + I A++DMY+KCG I A F+ P K + TW
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWT 428
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
++ G A++G ALK F +M+ PN +TFLA+L AC HSG ++KG +YF+ M Q
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM-KQ 487
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
YN+SP L+HY CM DLL R G L+EAL L+R M PD I GALL+ACK
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACK 538
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 183/390 (46%), Gaps = 18/390 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N I + P ++L +R++ R GF P+++TFP + K+CA +G +H +I
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K D++V + V ++ C+ A KVF+ MP RD +W ++++G+ ++G D+A +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+F M + P++ T ++L+ +L++ +H + + V + +N + Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 254 KCECLSEAKQIFHELPKKD--IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
KC L AK +F + + D +VSW S+ ++ L+ M +PD
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
++ ++C N L GR +H + +DI + MY+K A F+ M
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+ +W +++G A G AL F M+ G P+ VT L++++ C G ++ G+
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW- 378
Query: 432 FNQMISQQYNLSPRLEHYGCMTD--LLCRA 459
+ R + YGC D ++C A
Sbjct: 379 ----------IDARADIYGCKRDNVMICNA 398
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%)
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
+ +W I V P ESL+LFR+M G EP+ V ACA + D+ VH
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYA 392
++ + D+ +GTA VDM+ KC ++ A + F MP ++ TWNA+L+G G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 393 ALKFFEEMVGEGSTPNEVTFLAILTAC 419
A F EM TP+ VT + ++ +
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSA 163
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 252/488 (51%), Gaps = 23/488 (4%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C L++ K IH+ + S + V +VDF+ K CG L+
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK--------CGELEMAIKVF 161
Query: 73 SSFP------FNSLISSYAGSDRPQIAILCYRQIVR-NGFLPDSYTFPAMLKSCAMFLGI 125
P +N++IS ++ I + + R +G P+ T M + +
Sbjct: 162 DEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 126 GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGY 185
EG +HG +MG DL V+ ++ +Y A +VFD ++ V+W+++I GY
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY 281
Query: 186 ARAGLFDEAVTMFLSMNVEPNTATFVS-----LLVGCGRSGNLRMGRRIHGLIFKRASKV 240
+ EA +F M V N A +L+GC R G+L GR +H K +
Sbjct: 282 VENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL 341
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
L N ++ Y K L +A + F E+ KD++S+ S+I+G V RP+ES LF +M
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
+SGI PD L VL+AC+++ L +G H Y + I A++DMY KCG ++
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 361 RALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
A + F+ M ++I +WN +L G +HG G AL F M G P+EVT LAIL+AC
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLI 480
HSGLVD+G++ FN M +N+ PR++HY CMTDLL RAG LDEA V MP PD+ +
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 481 LGALLSAC 488
LG LLSAC
Sbjct: 582 LGTLLSAC 589
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 228/466 (48%), Gaps = 46/466 (9%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R++ ++ +I +YA +D + A+ Y +++ +G P YT+P +LK+CA I +G
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IH V D+YV +LV Y C + A KVFDEMP RD+V+W ++I+G++
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 191 FDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+ + +FL M + PN +T V + GR+G LR G+ +HG + L
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM----HSS 302
++D+Y K +C+ A+++F KK+ V+W+++I G V+ + KE+ +F +M + +
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
+ P V + +L CA GDL GR VH Y + D+ + ++ YAK G + A
Sbjct: 305 MVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F+E+ K++ ++N+L+ G ++ R + + F EM G P+ T L +LTAC H
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD------------------- 463
+ G + Y ++ + + D+ + G LD
Sbjct: 423 AALGHGSSCHGYCVVHGYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNT 480
Query: 464 ------------EALMLVRTMP---MAPDVLILGALLSACKDKGIL 494
EAL L +M + PD + L A+LSAC G++
Sbjct: 481 MLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLV 526
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 140/260 (53%), Gaps = 19/260 (7%)
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM---YVKCECLSEAKQIFH 266
F+SLL C RS NL +G+ IH + KR+ ++L +S L+++ Y C + A+ +F
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRS--LTLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 267 ELPKKDI--VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
E+P I ++W +I +++L L+ KM +SG+ P VL ACA + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
D G+ +H +++ D+++ TA+VD YAKCG +E A++ F+EMP +++ WNA+++G
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 385 AMHGRGYAALKFFEEMVG-EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
++H + F +M +G +PN T + + A +G + +G+ +
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV--------HGYC 231
Query: 444 PRLEHYGCMTDLLCRAGLLD 463
R+ G DL+ + G+LD
Sbjct: 232 TRM---GFSNDLVVKTGILD 248
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 150/327 (45%), Gaps = 9/327 (2%)
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEM 170
F ++L++C + G IH ++K L + V +L LY C++ A VFDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 171 PVRDV--VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRM 225
P + ++W +I YA ++A+ ++ M V P T+ +L C +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 226 GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ 285
G+ IH + + AL+D Y KC L A ++F E+PK+D+V+W ++ISG
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 286 CQRPKESLVLFRKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
+ + LF M G+ P+ + + A G L G+ VH Y R D+
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR-GYAALKFFEEMVGE 403
+ T ++D+YAK CI A + F+ KN TW+A++ G + A FF+ +V +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 404 G-STPNEVTFLAILTACCHSGLVDKGR 429
+ V IL C G + GR
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGR 328
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 270/542 (49%), Gaps = 88/542 (16%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP------FNSL 80
+ HA+++ SG + + +++ + ++ C D + S P F+SL
Sbjct: 36 QAHARILKSGAQNDGYISAKLI------ASYSNYNC--FNDADLVLQSIPDPTIYSFSSL 87
Query: 81 ISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGL 140
I + + +I + ++ +G +PDS+ P + K CA G QIH + GL
Sbjct: 88 IYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGL 147
Query: 141 VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV------------------------ 176
D +VQ S+ H+Y C A KVFD M +DVV
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSE 207
Query: 177 -----------SWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGN 222
SW I++G+ R+G EAV MF ++ P+ T S+L G S
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVK---------------------CEC---- 257
L MGR IHG + K+ +A++DMY K C
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 258 ------LSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
+ +A ++F ++ ++VSWTSII+G Q + E+L LFR+M +G++P+
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
V + S+L AC N+ L +GR H + R + ++H+G+A++DMYAKCG I + FN
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
MP KN+ WN+L+NG +MHG+ + FE ++ P+ ++F ++L+AC GL D+
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G KYF +M+S++Y + PRLEHY CM +LL RAG L EA L++ MP PD + GALL++
Sbjct: 508 GWKYF-KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 488 CK 489
C+
Sbjct: 567 CR 568
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 229/384 (59%), Gaps = 4/384 (1%)
Query: 110 YTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE 169
+ + A+L +C + +G ++H +IK + Y++ L+ YG CD A KV DE
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 170 MPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMG 226
MP ++VVSWT++I+ Y++ G EA+T+F M + +PN TF ++L C R+ L +G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC 286
++IHGLI K + ++L+DMY K + EA++IF LP++D+VS T+II+G Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
+E+L +F ++HS G+ P+ V S+L+A + + LD+G+ H ++ RR + +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
+++DMY+KCG + A + F+ MP + +WNA+L G + HG G L+ F M E
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 407 -PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
P+ VT LA+L+ C H + D G F+ M++ +Y P EHYGC+ D+L RAG +DEA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 466 LMLVRTMPMAPDVLILGALLSACK 489
++ MP P +LG+LL AC+
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACR 436
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 188/367 (51%), Gaps = 28/367 (7%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP----- 76
L+ +++HA ++ + + + R++ F+GK C L+ + P
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK--------CDCLEDARKVLDEMPEKNVV 119
Query: 77 -FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++IS Y+ + A+ + +++R+ P+ +TF +L SC G+G G QIHG++
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
+K ++V +SL+ +Y + A ++F+ +P RDVVS T+IIAGYA+ GL +EA+
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 196 TMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
MF ++ E PN T+ SLL L G++ H + +R N+L+DMY
Sbjct: 240 EMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMY 299
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG-IEPDGVIL 311
KC LS A+++F +P++ +SW +++ G + +E L LFR M ++PD V L
Sbjct: 300 SKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 312 TSVLSACANVGDLDYGRWVH------EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
+VLS C++ D G + EY + + H G +VDM + G I+ A +
Sbjct: 360 LAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE---HYG-CIVDMLGRAGRIDEAFEF 415
Query: 366 FNEMPCK 372
MP K
Sbjct: 416 IKRMPSK 422
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 152/309 (49%), Gaps = 2/309 (0%)
Query: 165 KVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLR 224
+ F P V+ I+ G EA+ + E + +LL C LR
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALR 69
Query: 225 MGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
G+R+H + K + L+ Y KC+CL +A+++ E+P+K++VSWT++IS
Sbjct: 70 DGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
Q E+L +F +M S +P+ +VL++C L G+ +H I + I
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
+G++++DMYAK G I+ A + F +P +++ + A++ G A G AL+ F + EG
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
+PN VT+ ++LTA L+D G++ ++ ++ L++ + D+ + G L
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSY 307
Query: 465 ALMLVRTMP 473
A L MP
Sbjct: 308 ARRLFDNMP 316
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 252/478 (52%), Gaps = 7/478 (1%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++H ++ SG + V +V F+ K+ VD + R +NS+I+ Y
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKN-QRVDSARKVFDEMTER-DVISWNSIINGYV 272
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ + + + Q++ +G D T ++ CA I G +H I +K +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE- 204
N+L+ +Y C D SA VF EM R VVS+TS+IAGYAR GL EAV +F M E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
P+ T ++L C R L G+R+H I + + SNALMDMY KC + EA+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACANV 321
+F E+ KDI+SW +II G + E+L LF + PD + VL ACA++
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
D GR +H YI R D H+ ++VDMYAKCG + A F+++ K++ +W ++
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
G MHG G A+ F +M G +E++F+++L AC HSGLVD+G ++FN M +
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM-RHECK 631
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
+ P +EHY C+ D+L R G L +A + MP+ PD I GALL C+ +KL +
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 221/429 (51%), Gaps = 14/429 (3%)
Query: 51 FGKSVDFVDFGCGFLKQCDWRV-------SSFPFNSLISSYAGSDRPQIAILCYRQIVRN 103
G + + CG LK+ RV + +N L++ A S +I +++++ +
Sbjct: 131 LGSKLSLMYTNCGDLKEAS-RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
G DSYTF + KS + + G Q+HG ++K G V NSLV Y SA
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSA 249
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRS 220
KVFDEM RDV+SW SII GY GL ++ +++F+ M +E + AT VS+ GC S
Sbjct: 250 RKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
+ +GR +H + K N L+DMY KC L AK +F E+ + +VS+TS+I
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
+G + E++ LF +M GI PD +T+VL+ CA LD G+ VHE+I +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
DI + A++DMYAKCG ++ A F+EM K+I +WN ++ G + + AL F +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 401 VGEGS-TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
+ E +P+E T +L AC DKGR+ ++ Y S R + D+ +
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDR-HVANSLVDMYAKC 547
Query: 460 GLLDEALML 468
G L A ML
Sbjct: 548 GALLLAHML 556
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 187/368 (50%), Gaps = 5/368 (1%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
D T ++L+ CA + +G ++ + G V D + + L +Y C D + A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLR 224
DE+ + + W ++ A++G F ++ +F +S VE ++ TF + ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 225 MGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
G ++HG I K N+L+ Y+K + + A+++F E+ ++D++SW SII+G V
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
++ L +F +M SGIE D + SV + CA+ + GR VH + R+
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
++DMY+KCG ++ A F EM +++ ++ +++ G A G A+K FEEM EG
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
+P+ T A+L C L+D+G++ + ++ +L + + D+ + G + E
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWI--KENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 465 ALMLVRTM 472
A ++ M
Sbjct: 451 AELVFSEM 458
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 142/316 (44%), Gaps = 7/316 (2%)
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF-LSMNVEPNTATFVSLLVGC 217
DC + FD R V + + + +G + AV + +S + + T S+L C
Sbjct: 49 DCVDSITTFD----RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLC 104
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
S +L+ G+ + I + + L MY C L EA ++F E+ + + W
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWN 164
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
+++ L + S+ LF+KM SSG+E D + V + +++ + G +H +I +
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+G ++V Y K ++ A + F+EM +++ +WN+++NG +G L F
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
+M+ G + T +++ C S L+ GR + + ++ R + D+
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF--CNTLLDMYS 342
Query: 458 RAGLLDEALMLVRTMP 473
+ G LD A + R M
Sbjct: 343 KCGDLDSAKAVFREMS 358
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 272/490 (55%), Gaps = 30/490 (6%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
L + +C NL K++HAQ++ + + + +++ +Q + V
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLIS-----------ALSLCRQTNLAV 71
Query: 73 SSFPF---------NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
F NSLI ++A + +P A + ++ R G D++T+P +LK+C+
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDD--CRSAGKVFDEMPVRDVVSWTSI 181
+ +H + K+GL D+YV N+L+ Y C R A K+F++M RD VSW S+
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 182 IAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
+ G +AG +A +F M + + ++ ++L G R R + L K + +
Sbjct: 192 LGGLVKAGELRDARRLFDEMP-QRDLISWNTMLDGYARC---REMSKAFELFEKMPERNT 247
Query: 242 LEASNALMDMYVKCECLSEAKQIFHE--LPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
+ S +M Y K + A+ +F + LP K++V+WT II+G + KE+ L +M
Sbjct: 248 VSWSTMVMG-YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+SG++ D + S+L+AC G L G +H + R + + ++ A++DMYAKCG +
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
++A FN++P K++ +WN +L+GL +HG G A++ F M EG P++VTF+A+L +C
Sbjct: 367 KKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVL 479
H+GL+D+G YF M + Y+L P++EHYGC+ DLL R G L EA+ +V+TMPM P+V+
Sbjct: 427 NHAGLIDEGIDYFYSM-EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 480 ILGALLSACK 489
I GALL AC+
Sbjct: 486 IWGALLGACR 495
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 142/262 (54%), Gaps = 9/262 (3%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPV--RDVVSWTSIIAGYARAGLFDEA---VTMFLSMN 202
+++V Y D A +FD+MP+ ++VV+WT IIAGYA GL EA V ++
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
++ + A +S+L C SG L +G RIH ++ + + NAL+DMY KC L +A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
+F+++PKKD+VSW +++ GL KE++ LF +M GI PD V +VL +C + G
Sbjct: 371 DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 323 DLDYGRWVHEYIDR--RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNA 379
+D G +++ + + H G +VD+ + G ++ A++ MP + N+ W A
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYG-CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 380 LLNGLAMHGRGYAALKFFEEMV 401
LL MH A + + +V
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLV 511
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 139/326 (42%), Gaps = 44/326 (13%)
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
F L + NL +++H I +R L + L+ C + A ++F+++
Sbjct: 19 FEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ 78
Query: 270 KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
+ ++ S+I Q +P ++ +F +M G+ D +L AC+ L +
Sbjct: 79 EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCI-------------ER--------------- 361
+H +I++ + DI++ A++D Y++CG + ER
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 362 -----ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
A + F+EMP +++ +WN +L+G A A + FE+M N V++ ++
Sbjct: 199 GELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM----PERNTVSWSTMV 254
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
+G ++ R F++M N+ + + GLL EA LV M +
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVT----WTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 477 ---DVLILGALLSACKDKGILKLPTR 499
D + ++L+AC + G+L L R
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMR 336
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 262/487 (53%), Gaps = 10/487 (2%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
L++ +R C + +IH +V +G+ ++D V +++ F SV + + +
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAF--SSVLDIRYASSIFEHVS-N 87
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+ F FN++I Y+ SD P+ A + Q+ G D ++F LKSC+ L + G +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIAGYARAGL 190
HGI ++ G + ++N+L+H Y VC A KVFDEMP D V++++++ GY +
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
A+ +F M V N +T +S L G+L H L K + L A
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L+ MY K +S A++IF +KD+V+W +I + +E + L R+M ++P+
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+LS+CA GR V + ++ I D +GTA+VDMYAK G +E+A++ FN
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST--PNEVTFLAILTACCHSGLV 425
M K++ +W A+++G HG A+ F +M E PNE+TFL +L AC H GLV
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+G + F +M+ + Y+ +P++EHYGC+ DLL RAG L+EA L+R +P+ D ALL
Sbjct: 448 MEGIRCFKRMV-EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL 506
Query: 486 SACKDKG 492
+AC+ G
Sbjct: 507 AACRVYG 513
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 244/467 (52%), Gaps = 6/467 (1%)
Query: 27 KIHAQLVTSGIVRND-LVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
++HA V G N L V V+ V +D C ++ + S FN+LI+ Y
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK-DSVTFNTLITGYE 226
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+I + ++ ++G P +TF +LK+ G Q+H + + G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN--- 202
V N ++ Y D +FDEMP D VS+ +I+ Y++A ++ ++ F M
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+ F ++L +L+MGR++H + L N+L+DMY KCE EA+
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
IF LP++ VSWT++ISG VQ L LF KM S + D +VL A A+
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
L G+ +H +I R ++ G+ +VDMYAKCG I+ A+Q F EMP +N +WNAL++
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALIS 526
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
A +G G AA+ F +M+ G P+ V+ L +LTAC H G V++G +YF Q +S Y +
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF-QAMSPIYGI 585
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+P+ +HY CM DLL R G EA L+ MP PD ++ ++L+AC+
Sbjct: 586 TPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACR 632
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 207/413 (50%), Gaps = 15/413 (3%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++HA VT+G R+ V +++DF+ K ++ F + + S +N +ISSY+
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS--YNVVISSYS 327
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+D+ + ++ +R++ GF ++ F ML A + G Q+H + L+
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---N 202
V NSLV +Y C+ A +F +P R VSWT++I+GY + GL + +F M N
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+ + +TF ++L +L +G+++H I + + ++ + + L+DMY KC + +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
Q+F E+P ++ VSW ++IS + ++ F KM SG++PD V + VL+AC++ G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 323 DLDYGRWVHEYIDRRA-----IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFT 376
++ G EY + + H M+D+ + G A + +EMP + +
Sbjct: 568 FVEQGT---EYFQAMSPIYGITPKKKHYA-CMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
W+++LN +H A + E++ + ++++ +G +K R
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 16/364 (4%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--- 204
N+++ + D SA +FD MP R VV+WT ++ YAR FDEA +F M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS--LEASNALMDMYVKCECLSE 260
P+ TF +LL GC + ++H K + L SN L+ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A +F E+P+KD V++ ++I+G + ES+ LF KM SG +P + VL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
+ D G+ +H RD +G ++D Y+K + F+EMP + ++N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
++ + + A+L FF EM G F +L+ + + GR+ Q +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---L 379
Query: 441 NLSPRLEHYG-CMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGI----LK 495
+ + H G + D+ + + +EA ++ +++P V AL+S KG+ LK
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALISGYVQKGLHGAGLK 438
Query: 496 LPTR 499
L T+
Sbjct: 439 LFTK 442
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
R G + R+++ + + + ++N ++ +VK +S A+ +F +P + +V+WT
Sbjct: 60 RRGQVSAARKVYDEMPHKNTV----STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115
Query: 279 IISGLVQCQRPKESLVLFRKM--HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
++ + E+ LFR+M SS PD V T++L C + + VH + +
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 337 RAIKRD--IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
+ + + ++ Y + ++ A F E+P K+ T+N L+ G G ++
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 395 KFFEEMVGEGSTPNEVTFLAILTA 418
F +M G P++ TF +L A
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKA 259
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 232/411 (56%), Gaps = 17/411 (4%)
Query: 90 PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNS 149
P+ AI + +V +GF D +T ++ +CA + G Q+H I+ GLV D V+ S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECS 307
Query: 150 LVHLYGVC------DDCRSAGKVFDEMPVRDVVSWTSIIAGYAR-AGLFDEAVTMFLSM- 201
LV +Y C DDCR KVFD M V+SWT++I GY + L EA+ +F M
Sbjct: 308 LVDMYAKCSADGSVDDCR---KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 202 ---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECL 258
+VEPN TF S CG + R+G+++ G FKR + +N+++ M+VK + +
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 259 SEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
+A++ F L +K++VS+ + + G + +++ L ++ + S+LS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
ANVG + G +H + + + + + A++ MY+KCG I+ A + FN M +N+ +W
Sbjct: 485 ANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWT 544
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
+++ G A HG L+ F +M+ EG PNEVT++AIL+AC H GLV +G ++FN M +
Sbjct: 545 SMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY-E 603
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ + P++EHY CM DLLCRAGLL +A + TMP DVL+ L AC+
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 173/336 (51%), Gaps = 20/336 (5%)
Query: 100 IVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
+ R+G P DS TF ++LKSC G +H +I+ + D + NSL+ LY
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 159 DCRSAGKVFDEM---PVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVS 212
D A VF+ M RDVVSW++++A Y G +A+ +F L + + PN + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRA---SKVSLEASNALMDMYVKCE-CLSEAKQIFHEL 268
++ C S + +GR G + K S V + S L+DM+VK E A ++F ++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS--LIDMFVKGENSFENAYKVFDKM 229
Query: 269 PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
+ ++V+WT +I+ +Q P+E++ F M SG E D L+SV SACA + +L G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKC---GCIERALQTFNEMPCKNIFTWNALLNGLA 385
+H + R + D+ ++VDMYAKC G ++ + F+ M ++ +W AL+ G
Sbjct: 290 QLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 386 MH-GRGYAALKFFEEMVGEGST-PNEVTFLAILTAC 419
+ A+ F EM+ +G PN TF + AC
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 132/265 (49%), Gaps = 8/265 (3%)
Query: 161 RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP-NTATFVSLLVGCGR 219
+S V + + V D + + AG R + A+ + + P ++ TF SLL C R
Sbjct: 17 KSQPSVSNRINVADRLILRHLNAGDLRGAV--SALDLMARDGIRPMDSVTFSSLLKSCIR 74
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL---PKKDIVSW 276
+ + R+G+ +H + + + N+L+ +Y K ++A+ +F + K+D+VSW
Sbjct: 75 ARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSW 134
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
+++++ R +++ +F + G+ P+ T+V+ AC+N + GR ++ +
Sbjct: 135 SAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194
Query: 337 RA-IKRDIHIGTAMVDMYAKC-GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
+ D+ +G +++DM+ K E A + F++M N+ TW ++ G A+
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 395 KFFEEMVGEGSTPNEVTFLAILTAC 419
+FF +MV G ++ T ++ +AC
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 299 MHSSGIEP-DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
M GI P D V +S+L +C D G+ VH + I+ D + +++ +Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 358 CIERALQTFNEM---PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
+A F M +++ +W+A++ +GR A+K F E + G PN+ + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 415 ILTACCHSGLVDKGR 429
++ AC +S V GR
Sbjct: 172 VIRACSNSDFVGVGR 186
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 269/493 (54%), Gaps = 13/493 (2%)
Query: 6 LNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFL 65
+N LL + + L +++HA+++ G ++ + + + +S + +DF
Sbjct: 4 VNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQS-NRLDFATSSF 62
Query: 66 KQCD-WRVSSFPFNSLISSYAGSDR--PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
+ W+ + +N+++S Y+ S +L Y ++ R+ DS+ +K+C
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
+ G+ IHG+ +K GL D YV SLV +Y SA KVFDE+PVR+ V W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 183 AGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA-- 237
GY + E +F M + + T + L+ CG ++G+ +HG+ +R+
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 238 -SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF 296
L+AS ++DMYVKC L A+++F +++V WT++ISG +C+R E+ LF
Sbjct: 243 DQSDYLQAS--IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 297 RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKC 356
R+M I P+ L ++L +C+++G L +G+ VH Y+ R I+ D T+ +DMYA+C
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 357 GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
G I+ A F+ MP +N+ +W++++N ++G AL F +M + PN VTF+++L
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
+AC HSG V +G K F M ++ Y + P EHY CM DLL RAG + EA + MP+ P
Sbjct: 421 SACSHSGNVKEGWKQFESM-TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP 479
Query: 477 DVLILGALLSACK 489
GALLSAC+
Sbjct: 480 MASAWGALLSACR 492
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 251/476 (52%), Gaps = 14/476 (2%)
Query: 21 NLKSFKKIHAQLVTSGIVRN----DLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP 76
+ K+IH L+ + + +L++KR + F ++ F F
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNI------FL 78
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NSLI+ + + + + I ++G +TFP +LK+C G+ +H +V+
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K G D+ SL+ +Y A K+FDE+P R VV+WT++ +GY +G EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 197 MF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+F + M V+P++ V +L C G+L G I + + + + L+++Y
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
KC + +A+ +F + +KDIV+W+++I G PKE + LF +M ++PD +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
LS+CA++G LD G W IDR ++ + A++DMYAKCG + R + F EM K+
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
I NA ++GLA +G + F + G +P+ TFL +L C H+GL+ G ++FN
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
IS Y L +EHYGCM DL RAG+LD+A L+ MPM P+ ++ GALLS C+
Sbjct: 439 A-ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 191/370 (51%), Gaps = 6/370 (1%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
QIH +I L D ++ N L+ + + +F ++ + S+I G+
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
LF E + +FLS+ + + TF +L C R+ + ++G +H L+ K + A
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+ +Y L++A ++F E+P + +V+WT++ SG R +E++ LF+KM G++P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D + VLSAC +VGDLD G W+ +Y++ ++++ + T +V++YAKCG +E+A F
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
+ M K+I TW+ ++ G A + ++ F +M+ E P++ + + L++C G +D
Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALD 330
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLS 486
G + + ++ L + D+ + G + + + M D++I+ A +S
Sbjct: 331 LGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAIS 387
Query: 487 ACKDKGILKL 496
G +KL
Sbjct: 388 GLAKNGHVKL 397
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 267/479 (55%), Gaps = 20/479 (4%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVV---KRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFN 78
LK +++H ++T+G+V D +V +V+ + K D F D S +N
Sbjct: 329 LKKGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTD--KDSVSWN 384
Query: 79 SLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM 138
S+I+ + A+ Y+ + R+ LP S+T + L SCA G QIHG +K+
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 139 GLVCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL-FDEA 194
G+ ++ V N+L+ LY G ++CR K+F MP D VSW SII AR+ EA
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECR---KIFSSMPEHDQVSWNSIIGALARSERSLPEA 501
Query: 195 VTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
V FL+ + N TF S+L +G++IHGL K NAL+
Sbjct: 502 VVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIAC 561
Query: 252 YVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
Y KC + ++IF + ++D V+W S+ISG + + ++L L M +G D +
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
+VLSA A+V L+ G VH R ++ D+ +G+A+VDMY+KCG ++ AL+ FN MP
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGR 429
+N ++WN++++G A HG+G ALK FE M +G T P+ VTF+ +L+AC H+GL+++G
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
K+F M S Y L+PR+EH+ CM D+L RAG LD+ + MPM P+VLI +L AC
Sbjct: 742 KHFESM-SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 207/422 (49%), Gaps = 20/422 (4%)
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF--LGIGEGMQIHGIVIK 137
++S Y+ + + A++ R +V+ G + Y F ++L++C +GI G QIHG++ K
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 138 MGLVCDLYVQNSLVHLYGVC-DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+ D V N L+ +Y C A F ++ V++ VSW SII+ Y++AG A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 197 MFLSMNVE---PNTATFVSLL-VGCGRSG-NLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+F SM + P TF SL+ C + ++R+ +I I K L + L+
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS-GIEPDG-V 309
+ K LS A+++F+++ ++ V+ ++ GLV+ + +E+ LF M+S + P+ V
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 310 ILTSVL---SACANVGDLDYGRWVHEY-IDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
IL S S VG L GR VH + I + + IG +V+MYAKCG I A +
Sbjct: 313 ILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F M K+ +WN+++ GL +G A++ ++ M P T ++ L++C
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV---LILG 482
G++ + + +L+ + + + L G L+E + +MP V I+G
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 489
Query: 483 AL 484
AL
Sbjct: 490 AL 491
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 143/284 (50%), Gaps = 10/284 (3%)
Query: 126 GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGY 185
G H + K L D+Y+ N+L++ Y D SA KVFDEMP+R+ VSW I++GY
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 186 ARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRM--GRRIHGLIFKRASKV 240
+R G EA+ M E N FVS+L C G++ + GR+IHGL+FK + V
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 241 SLEASNALMDMYVKC-ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
SN L+ MY KC + A F ++ K+ VSW SIIS Q + + +F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHE---YIDRRAIKRDIHIGTAMVDMYAKC 356
G P S+++ ++ + D R + + I + + D+ +G+ +V +AK
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 357 GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
G + A + FN+M +N T N L+ GL G A K F +M
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 196/422 (46%), Gaps = 21/422 (4%)
Query: 9 KWVLLDYIRRCNNLKSF-----KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFG-C 62
++ + +R C + S ++IH + + +V ++ + K + V + C
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALC 161
Query: 63 GFLKQCDWRV-SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAM 121
F D V +S +NS+IS Y+ + + A + + +G P YTF +++ +
Sbjct: 162 AF---GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 122 FLGIGEGM--QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWT 179
+ QI + K GL+ DL+V + LV + A KVF++M R+ V+
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 180 SIIAGYARAGLFDEAVTMFLSMN--VEPNTATFVSLL-----VGCGRSGNLRMGRRIHGL 232
++ G R +EA +F+ MN ++ + ++V LL L+ GR +HG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGH 338
Query: 233 IFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
+ + N L++MY KC +++A+++F+ + KD VSW S+I+GL Q E
Sbjct: 339 VITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIE 398
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD 351
++ ++ M I P L S LS+CA++ G+ +H + I ++ + A++
Sbjct: 399 AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458
Query: 352 MYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY-AALKFFEEMVGEGSTPNEV 410
+YA+ G + + F+ MP + +WN+++ LA R A+ F G N +
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRI 518
Query: 411 TF 412
TF
Sbjct: 519 TF 520
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 12/245 (4%)
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
G+ R H ++K + N L++ Y++ A+++F E+P ++ VSW I+
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD--YGRWVHEYIDRRA 338
SG + KE+LV R M GI + SVL AC +G + +GR +H + + +
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 339 IKRDIHIGTAMVDMYAKC-GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
D + ++ MY KC G + AL F ++ KN +WN++++ + G +A + F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
M +GS P E TF +++T C L + + Q++ ++ G +TDL
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTAC--SLTEPDVRLLEQIMCT-------IQKSGLLTDLFV 245
Query: 458 RAGLL 462
+GL+
Sbjct: 246 GSGLV 250
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
S + +C VG R+ H + + + +D+++ +++ Y + G A + F+EMP +
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
N +W +++G + +G AL F +MV EG N+ F+++L AC G V
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 238/427 (55%), Gaps = 13/427 (3%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F +NS+I+ A S A+L + + + P +FP +K+C+ I G Q H
Sbjct: 42 FSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
G D++V ++L+ +Y C A KVFDE+P R++VSWTS+I GY G +A
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 195 VTMFLSMNVEPN---------TATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
V++F + V+ N + VS++ C R + IH + KR +
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 246 NALMDMYVKCE--CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
N L+D Y K ++ A++IF ++ KD VS+ SI+S Q E+ +FR++ +
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 304 IEP-DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
+ + + L++VL A ++ G L G+ +H+ + R ++ D+ +GT+++DMY KCG +E A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F+ M KN+ +W A++ G MHG AL+ F M+ G PN +TF+++L AC H+
Sbjct: 342 RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILG 482
GL +G ++FN M ++ + P LEHYGCM DLL RAG L +A L++ M M PD +I
Sbjct: 402 GLHVEGWRWFNAM-KGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 483 ALLSACK 489
+LL+AC+
Sbjct: 461 SLLAACR 467
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 14/304 (4%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
DV SW S+IA AR+G EA+ F SM ++ P ++F + C ++ G++ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPK 290
F + + S+AL+ MY C L +A+++F E+PK++IVSWTS+I G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 291 ESLVLFRKMHSSGIEPDGVI------LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
+++ LF+ + + D + L SV+SAC+ V +H ++ +R R +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 345 IGTAMVDMYAKC--GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV- 401
+G ++D YAK G + A + F+++ K+ ++N++++ A G A + F +V
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+ T N +T +L A HSG + G+ +Q+I + L + + D+ C+ G
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI--RMGLEDDVIVGTSIIDMYCKCGR 337
Query: 462 LDEA 465
++ A
Sbjct: 338 VETA 341
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 125/276 (45%), Gaps = 53/276 (19%)
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ K D+ SW S+I+ L + E+L+ F M + P + AC+++ D+ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
+ H+ + DI + +A++ MY+ CG +E A + F+E+P +NI +W +++ G ++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFL------AILTACC-----------HSGLVDKG-- 428
G A+ F++++ + + ++ FL ++++AC HS ++ +G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 429 ------------------------RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
RK F+Q++ + R+ Y + + ++G+ +E
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD-----RVS-YNSIMSVYAQSGMSNE 269
Query: 465 AL----MLVRTMPMAPDVLILGALLSACKDKGILKL 496
A LV+ + + + L +L A G L++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 259/467 (55%), Gaps = 7/467 (1%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+ IH +V SG V + +V +V + K F + F + + V+S+ N++IS +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW--NTVISCFY 184
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
S + A+ + ++ +GF P+S + + +C+ L + G +IH +K G D Y
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE- 204
V ++LV +YG CD A +VF +MP + +V+W S+I GY G V + M +E
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
P+ T S+L+ C RS NL G+ IHG + + + + +L+D+Y KC + A+
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
+F + K SW +IS + +++ ++ +M S G++PD V TSVL AC+ +
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
L+ G+ +H I ++ D + +A++DMY+KCG + A + FN +P K++ +W +++
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
HG+ AL F+EM G P+ VT LA+L+AC H+GL+D+G K+F+QM S +Y +
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS-KYGI 543
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD-VLILGALLSAC 488
P +EHY CM D+L RAG L EA +++ P D +L L SAC
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSAC 590
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 256/489 (52%), Gaps = 12/489 (2%)
Query: 12 LLDYIRRCNN----LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ 67
LL +R C N L+ K +H +++T G+ R+ ++ K +++ + D F +
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF-EN 64
Query: 68 CDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMFLGIG 126
D R + +NSL+S Y+ + + +++++ +PDS+TFP ++K+
Sbjct: 65 FDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
G IH +V+K G VCD+ V +SLV +Y + ++ +VFDEMP RDV SW ++I+ +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 187 RAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
++G ++A+ +F M EPN+ + + C R L G+ IH K+ ++
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++AL+DMY KC+CL A+++F ++P+K +V+W S+I G V K + + +M G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P LTS+L AC+ +L +G+++H Y+ R + DI++ +++D+Y KCG A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
F++ +WN +++ G + A++ +++MV G P+ VTF ++L AC
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 424 LVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGA 483
++KG++ + + L + D+ + G EA + ++P DV+
Sbjct: 425 ALEKGKQIHLSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTV 481
Query: 484 LLSACKDKG 492
++SA G
Sbjct: 482 MISAYGSHG 490
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 5/271 (1%)
Query: 206 NTATFVSLLVGCGRSG-NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
++ +SLL C S +LR + +H I + + +L+++Y C+ A+ +
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 265 FHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI-EPDGVILTSVLSACANVG 322
F + D+ W S++SG + ++L +F+++ + I PD +V+ A +G
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
GR +H + + D+ + +++V MYAK E +LQ F+EMP +++ +WN +++
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
G AL+ F M G PN V+ ++AC +++G++ + + + + L
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
+ + D+ + L+ A + + MP
Sbjct: 242 DEYVN--SALVDMYGKCDCLEVAREVFQKMP 270
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 234/419 (55%), Gaps = 7/419 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIV-RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
++S++S + + P A+ +R++V + PD T ++ +C G +HG V
Sbjct: 111 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 170
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
I+ G DL + NSL++ Y + A +F + +DV+SW+++IA Y + G EA+
Sbjct: 171 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 230
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+F M EPN AT + +L C + +L GR+ H L ++ + ++ S AL+DMY
Sbjct: 231 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 290
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH-SSGIEPDGVIL 311
+KC EA +F +P+KD+VSW ++ISG S+ F M + PD +++
Sbjct: 291 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 350
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
VL +C+ +G L+ + H Y+ + + IG ++V++Y++CG + A + FN +
Sbjct: 351 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL 410
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRK 430
K+ W +L+ G +HG+G AL+ F MV PNEVTFL+IL+AC H+GL+ +G +
Sbjct: 411 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 470
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
F M++ Y L+P LEHY + DLL R G LD A+ + + MP +P ILG LL AC+
Sbjct: 471 IFKLMVN-DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 528
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 220/399 (55%), Gaps = 8/399 (2%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S + +N+L+ S + + + + + + R+ PD++T P LK+C + G IH
Sbjct: 5 SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIH 64
Query: 133 GIVIK-MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
G V K + L DLYV +SL+++Y C A ++FDE+ D+V+W+S+++G+ + G
Sbjct: 65 GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 124
Query: 192 DEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+AV F M +V P+ T ++L+ C + N R+GR +HG + +R L N+
Sbjct: 125 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 184
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L++ Y K EA +F + +KD++SW+++I+ VQ E+L++F M G EP+
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN 244
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ VL ACA DL+ GR HE R+ ++ ++ + TA+VDMY KC E A F+
Sbjct: 245 VATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 304
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVD 426
+P K++ +W AL++G ++G + +++ F M+ E +T P+ + + +L +C G ++
Sbjct: 305 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 364
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
+ + + + +I ++ +P + + +L R G L A
Sbjct: 365 QAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNA 401
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ K+ + W +++ L + ++ +E L F M +PD L L AC + +++YG
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 328 RWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAM 386
+H ++ + + D+++G++++ MY KCG + AL+ F+E+ +I TW+++++G
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 387 HGRGYAALKFFEEMV-GEGSTPNEVTFLAILTAC 419
+G Y A++FF MV TP+ VT + +++AC
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSAC 154
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 254/489 (51%), Gaps = 39/489 (7%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
L + C NL++ +IH + G+ + +++ S+ L C
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQI 131
+F FN+L+ Y+ SD P ++ + +++R GF+ PDS++F ++K+ F + G Q+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H +K GL L+V +L+ +YG C A KVFDEM ++V+W ++I R
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 192 DEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
A +F M V +T+ N ++
Sbjct: 189 AGAREIFDKMLVRNHTSW------------------------------------NVMLAG 212
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y+K L AK+IF E+P +D VSW+++I G+ ES + FR++ +G+ P+ V L
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
T VLSAC+ G ++G+ +H ++++ + + A++DMY++CG + A F M
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 372 KN-IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
K I +W +++ GLAMHG+G A++ F EM G TP+ ++F+++L AC H+GL+++G
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKD 490
YF++M + Y++ P +EHYGCM DL R+G L +A + MP+ P ++ LL AC
Sbjct: 393 YFSEM-KRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 491 KGILKLPTR 499
G ++L +
Sbjct: 452 HGNIELAEQ 460
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 242/423 (57%), Gaps = 13/423 (3%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
++ +I SY S P + + ++++V PD T ++LK+C + I G +HG
Sbjct: 193 WSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFS 252
Query: 136 IKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
I+ G + D++V NSL+ +Y D SA +VFDE R++VSW SI+AG+ +DEA
Sbjct: 253 IRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEA 312
Query: 195 VTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ MF M VE + T VSLL C + IHG+I +R + + A ++L+D
Sbjct: 313 LEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDA 372
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y C + +A + + KD+VS +++ISGL R E++ +F M + P+ + +
Sbjct: 373 YTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITV 429
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIK-RDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
S+L+AC+ DL +W H RR++ DI +GT++VD YAKCG IE A +TF+++
Sbjct: 430 ISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT 489
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
KNI +W +++ A++G AL F+EM +G TPN VT+LA L+AC H GLV KG
Sbjct: 490 EKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLM 549
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP--MAPDVLILGALLSAC 488
F M+ + + P L+HY C+ D+L RAG +D A+ L++ +P + GA+LS C
Sbjct: 550 IFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Query: 489 KDK 491
+++
Sbjct: 608 RNR 610
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 57/427 (13%)
Query: 97 YRQIVRNGF-LPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYG 155
Y +I R G D + FP + K+CA + +G NS+ Y
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG-------------------NSIADFYM 72
Query: 156 VCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV---EPNTATFVS 212
C D S + FD M RD VSW I+ G G +E + F + V EPNT+T V
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVL 132
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
++ C RS G +IHG + + N+++ MY + LS A+++F E+ ++D
Sbjct: 133 VIHAC-RSLWFD-GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERD 189
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
++SW+ +I VQ + P L LF++M H + EPD V +TSVL AC + D+D GR VH
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 332 EYIDRRAIK-RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
+ RR D+ + +++DMY+K ++ A + F+E C+NI +WN++L G + R
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 391 YAALKFFEEMVGEGSTPNEVTFLAILTAC-----------CHSGLVDKGRKYFNQMISQ- 438
AL+ F MV E +EVT +++L C H ++ +G + +S
Sbjct: 310 DEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSL 369
Query: 439 --QYNLSPRLEHYGCMTDL---------------LCRAGLLDEALMLVRTMPMAPDVLIL 481
Y ++ G + D L AG DEA+ + M P+ + +
Sbjct: 370 IDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITV 429
Query: 482 GALLSAC 488
+LL+AC
Sbjct: 430 ISLLNAC 436
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 273/495 (55%), Gaps = 13/495 (2%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
+R+C + +S K I A ++ SG ++ ++VD K D +D+ R
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGD-IDYARQVFDGMSER- 128
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
+NSLI+ R + A+ YR ++ N LPD YT ++ K+ + E + H
Sbjct: 129 HIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSH 188
Query: 133 GIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
G+ + +GL V +++V ++LV +Y R A V D + +DVV T++I GY++ G
Sbjct: 189 GLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGED 248
Query: 192 DEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
EAV F SM V+PN T+ S+L+ CG ++ G+ IHGL+ K + +L + +L
Sbjct: 249 TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSL 308
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ MY++C + ++ ++F + + VSWTS+ISGLVQ R + +L+ FRKM I+P+
Sbjct: 309 LTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
L+S L C+N+ + GR +H + + RD + G+ ++D+Y KCGC + A F+
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
+ ++ + N ++ A +G G AL FE M+ G PN+VT L++L AC +S LV++G
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+ F+ + L+ +HY CM DLL RAG L+EA ML T + PD+++ LLSAC
Sbjct: 489 CELFDSFRKDKIMLTN--DHYACMVDLLGRAGRLEEAEMLT-TEVINPDLVLWRTLLSAC 545
Query: 489 KDKGILKLPTRYTRP 503
K +++ R TR
Sbjct: 546 KVHRKVEMAERITRK 560
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 263/497 (52%), Gaps = 33/497 (6%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRND-LVVKRVVDFFGKSVDFVDFGCGFLKQC--- 68
++RC K + ++IH +V G + + +V+ + K CG +++
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK--------CGLMRRAVLV 118
Query: 69 --DWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLK-SCAMFLGI 125
F +N+LIS + + P A+ YR++ NG LPD YTFP++LK S AM L
Sbjct: 119 FGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS- 177
Query: 126 GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRD-VVSWTSIIAG 184
+ ++HG+ K+G D YV + LV Y A KVFDE+P RD V W +++ G
Sbjct: 178 -DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 185 YARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
Y++ F++A+ +F M E + T S+L SG++ GR IHGL K S
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ SNAL+DMY K + L EA IF + ++D+ +W S++ C +L LF +M
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEY------IDRRAIKRDIHIGTAMVDMYAK 355
SGI PD V LT+VL C + L GR +H Y ++R++ IH +++DMY K
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH--NSLMDMYVK 414
Query: 356 CGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAI 415
CG + A F+ M K+ +WN ++NG + G AL F M G P+E+TF+ +
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 416 LTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA 475
L AC HSG +++GR + QM YN+ P +HY C+ D+L RA L+EA L + P+
Sbjct: 475 LQACSHSGFLNEGRNFLAQM-ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 476 PDVLILGALLSACKDKG 492
+ ++ ++LS+C+ G
Sbjct: 534 DNPVVWRSILSSCRLHG 550
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 186/388 (47%), Gaps = 13/388 (3%)
Query: 114 AMLKSCAMFLGIGEGMQIHGIVIKMGLVCDL-YVQNSLVHLYGVCDDCRSAGKVFDEMPV 172
A L+ CA G QIHG +++ G + D SLV++Y C R A VF
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE- 123
Query: 173 RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRI 229
RDV + ++I+G+ G +A+ + M P+ TF SLL G + L +++
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKV 182
Query: 230 HGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQR 288
HGL FK + L+ Y K + +A+++F ELP + D V W ++++G Q R
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+++L++F KM G+ +TSVLSA GD+D GR +H + DI + A
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPN 408
++DMY K +E A F M +++FTWN++L G L FE M+ G P+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 409 EVTFLAILTACCHSGLVDKGRKYFNQMI-SQQYNLSPRLEH-YGCMTDLLCRAGLLDEAL 466
VT +L C + +GR+ MI S N E + + D+ + G L +A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 467 MLVRTMPMAP----DVLILGALLSACKD 490
M+ +M + +++I G + +C +
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGE 450
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 16/385 (4%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLI 81
L KK+H G + V +V + K + D F + D R S +N+L+
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD-RDDSVLWNALV 234
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
+ Y+ R + A+L + ++ G +T ++L + + I G IHG+ +K G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
D+ V N+L+ +YG A +F+ M RD+ +W S++ + G D + +F M
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 202 ---NVEPNTATFVSLLVGCGRSGNLRMGRRIH------GLIFKRASKVSLEASNALMDMY 252
+ P+ T ++L CGR +LR GR IH GL+ +++S + N+LMDMY
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH--NSLMDMY 412
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
VKC L +A+ +F + KD SW +I+G + +L +F M +G++PD +
Sbjct: 413 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 472
Query: 313 SVLSACANVGDLDYGRWVHEYIDR--RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
+L AC++ G L+ GR ++ + H ++DM + +E A + P
Sbjct: 473 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA-CVIDMLGRADKLEEAYELAISKP 531
Query: 371 -CKNIFTWNALLNGLAMHGRGYAAL 394
C N W ++L+ +HG AL
Sbjct: 532 ICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 4/226 (1%)
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNALMDMYVKCECLSEAKQI 264
N AT ++ L C + + G++IHG + ++ S A +L++MY KC + A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
F ++D+ + ++ISG V P +++ +R+M ++GI PD S+L ++ +L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMEL 176
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNG 383
+ VH + D ++G+ +V Y+K +E A + F+E+P + + WNAL+NG
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
+ R AL F +M EG + T ++L+A SG +D GR
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGR 282
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 255/471 (54%), Gaps = 6/471 (1%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLI 81
L+ K+IH LV SG + + + + + K + F + + + S+ N+++
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW--NTIV 208
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
+ Y+ + ++A+ + + P T ++L + + I G +IHG ++ G
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
+ + +LV +Y C +A ++FD M R+VVSW S+I Y + EA+ +F M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 202 ---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECL 258
V+P + + L C G+L GR IH L + ++ N+L+ MY KC+ +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 259 SEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
A +F +L + +VSW ++I G Q RP ++L F +M S ++PD SV++A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
A + + +W+H + R + +++ + TA+VDMYAKCG I A F+ M +++ TWN
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
A+++G HG G AAL+ FEEM PN VTFL++++AC HSGLV+ G K F M+ +
Sbjct: 509 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKE 567
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
Y++ ++HYG M DLL RAG L+EA + MP+ P V + GA+L AC+
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 194/369 (52%), Gaps = 10/369 (2%)
Query: 102 RNGFLPDSYTFPA--MLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDD 159
RN + Y PA +L+ C+ + E QI +V K GL + + Q LV L+
Sbjct: 28 RNYIPANVYEHPAALLLERCS---SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGS 84
Query: 160 CRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVG 216
A +VF+ + + V + +++ G+A+ D+A+ F+ M +VEP F LL
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV 144
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
CG LR+G+ IHGL+ K + L A L +MY KC ++EA+++F +P++D+VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
+I++G Q + +L + + M ++P + + SVL A + + + G+ +H Y R
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
++I TA+VDMYAKCG +E A Q F+ M +N+ +WN++++ + A+
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
F++M+ EG P +V+ + L AC G +++GR F +S + L + + +
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGR--FIHKLSVELGLDRNVSVVNSLISMY 382
Query: 457 CRAGLLDEA 465
C+ +D A
Sbjct: 383 CKCKEVDTA 391
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 231/423 (54%), Gaps = 6/423 (1%)
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
V+S P+N + A +I YR ++R+G PD+++FP +LKSCA G Q+
Sbjct: 16 VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS--WTSIIAGYARAG 189
H V K G + +V +L+ +Y C A KVF+E P +S + ++I+GY
Sbjct: 76 HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135
Query: 190 LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+A MF M V ++ T + L+ C L +GR +HG K + N
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+ + MY+KC + +++F E+P K +++W ++ISG Q + L L+ +M SSG+ P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D L SVLS+CA++G G V + ++ ++ + A + MYA+CG + +A F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
+ MP K++ +W A++ MHG G L F++M+ G P+ F+ +L+AC HSGL D
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLS 486
KG + F M ++Y L P EHY C+ DLL RAG LDEA+ + +MP+ PD + GALL
Sbjct: 376 KGLELFRAM-KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 487 ACK 489
ACK
Sbjct: 435 ACK 437
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 99/575 (17%)
Query: 20 NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF---- 75
N++ ++IH +++ SG+ N + V++ + K D F +SF
Sbjct: 309 NDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMV 368
Query: 76 -------------------------PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSY 110
+ +LI YA +++ A+ +R++ G + +
Sbjct: 369 DGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEV 428
Query: 111 TFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM 170
T ++ +C+ GI + + + IK+ L ++V +L+H+Y +C + A K+FDEM
Sbjct: 429 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 488
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMF-------------------------------- 198
P R++V+W ++ GY++AGL ++A +F
Sbjct: 489 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 548
Query: 199 --LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR-------------------- 236
L ++P+ V LL RS G ++HG I KR
Sbjct: 549 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 608
Query: 237 -----------ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ 285
+ K + + NAL+ +VK + +A+++F + KDI SW ++ISG Q
Sbjct: 609 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 668
Query: 286 CQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
P+ +L LFR+M SS ++PD + + SV SA +++G L+ G+ H+Y++ I + +
Sbjct: 669 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 728
Query: 345 IGTAMVDMYAKCGCIERALQTFNE---MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+ A++DMYAKCG IE AL F++ + I WNA++ G A HG AL + ++
Sbjct: 729 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 788
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
PN +TF+ +L+ACCH+GLV+ G+ YF M S + + P ++HYGCM DLL +AG
Sbjct: 789 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKS-DHGIEPDIKHYGCMVDLLGKAGR 847
Query: 462 LDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
L+EA +++ MP+ DV+I G LLSA + G +++
Sbjct: 848 LEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEI 882
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/521 (23%), Positives = 215/521 (41%), Gaps = 136/521 (26%)
Query: 114 AMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC---DDCRS-------- 162
+ L SCA + G QIH V+K GL + Y+ NS++++Y C D S
Sbjct: 300 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 359
Query: 163 --------------------AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM- 201
A K+FD MP R VS+T++I GYA+ + EA+ +F M
Sbjct: 360 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 419
Query: 202 --NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
+ N T +++ C G + R + L K + + S L+ MY C CL
Sbjct: 420 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 479
Query: 260 EAKQIFHELP-------------------------------KKDIVSWTSIISGLVQCQR 288
+A+++F E+P +KDIVSW ++I G ++ +
Sbjct: 480 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 539
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR----------- 337
E+LV + +M G++P V++ +LSA A G +H I +R
Sbjct: 540 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 599
Query: 338 -----AIKRDI-------------HIGT--AMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
A+ DI HI + A++ + K G +E+A + F++ K+IF+W
Sbjct: 600 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 659
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
NA+++G A AL F EM+ P+ +T +++ +A G +++G++ + +
Sbjct: 660 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL- 718
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALML---------------------------- 468
+ P + D+ + G ++ AL +
Sbjct: 719 -NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 777
Query: 469 ---------VRTMPMAPDVLILGALLSACKDKGILKLPTRY 500
++++P+ P+ + +LSAC G+++L Y
Sbjct: 778 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTY 818
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 128/258 (49%), Gaps = 35/258 (13%)
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE-- 267
VS L C S ++ GR+IH + K + N++++MY KC L++A+ +F +
Sbjct: 298 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 357
Query: 268 -----------------------------LPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+P++ VS+T++I G Q + E++ LFR+
Sbjct: 358 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 417
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M + GI + V L +V+SAC+++G + R + + ++ + + T ++ MY C C
Sbjct: 418 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 477
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
++ A + F+EMP +N+ TWN +LNG + G A + F+++ + + V++ ++
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDG 533
Query: 419 CCHSGLVDKGRKYFNQMI 436
C +D+ Y+ +M+
Sbjct: 534 CLRKNQLDEALVYYTEML 551
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH----SSGIEPDGVILT 312
C S + + + + +++S L C + + R++H SG++ +G I
Sbjct: 276 CFSAPSRTHFDFSGESSDTERALVSALGSCASSND-VTCGRQIHCRVLKSGLDSNGYICN 334
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
SVL+ A L E + R K D MVD Y + + AL+ F+ MP +
Sbjct: 335 SVLNMYAKCRLLADA----ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPER 390
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
+ ++ L+ G A + + A++ F EM G NEVT +++AC H G
Sbjct: 391 SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 441
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 255/487 (52%), Gaps = 10/487 (2%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL ++L+ + H+ ++ + +N V +VD + K D F + CD
Sbjct: 434 LLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-- 491
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+ +N++I SY + A ++++ G + D + LK+C G+ +G Q+
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H + +K GL DL+ +SL+ +Y C + A KVF +P VVS ++IAGY++ L
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 192 DEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN-A 247
+EAV +F L+ V P+ TF +++ C + +L +G + HG I KR E +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 248 LMDMYVKCECLSEAKQIFHELPK-KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
L+ MY+ ++EA +F EL K IV WT ++SG Q +E+L +++M G+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D +VL C+ + L GR +H I A D ++DMYAKCG ++ + Q F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 367 NEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
+EM + N+ +WN+L+NG A +G ALK F+ M P+E+TFL +LTAC H+G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
GRK F MI QY + R++H CM DLL R G L EA + + PD + +LL
Sbjct: 851 SDGRKIFEMMIG-QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Query: 486 SACKDKG 492
AC+ G
Sbjct: 910 GACRIHG 916
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 222/432 (51%), Gaps = 7/432 (1%)
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N +IS + +AI + + ++ T ++L + + + G+ +H
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
IK+GL ++YV +SLV +Y C+ +A KVF+ + ++ V W ++I GYA G + +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 196 TMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+F+ M + TF SLL C S +L MG + H +I K+ +L NAL+DMY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
KC L +A+QIF + +D V+W +II VQ + E+ LF++M+ GI DG L
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
S L AC +V L G+ VH + + RD+H G++++DMY+KCG I+ A + F+ +P
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
++ + NAL+ G + + A + F+EM+ G P+E+TF I+ AC + G ++
Sbjct: 594 SVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 433 NQMISQQYNLSPRLEHYG-CMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
Q+ + + S E+ G + + + + EA L + +++ ++S
Sbjct: 653 GQITKRGF--SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 492 GILKLPTRYTRP 503
G + ++ +
Sbjct: 711 GFYEEALKFYKE 722
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 219/458 (47%), Gaps = 51/458 (11%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVDFVDFGCGFLKQCDWRVSSFPFNS 79
L+ K +H++ + GI + +VD + K V + + FL++ +NS
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-----DVTAWNS 130
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
++S Y+ +P + + + N P+ +TF +L +CA + G QIH +IKMG
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
L + Y +LV +Y CD A +VF+ + + V WT + +GY +AGL +EAV +F
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 200 SMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M E P+ FV+++ + Y++
Sbjct: 251 RMRDEGHRPDHLAFVTVI-----------------------------------NTYIRLG 275
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVL--FRKMHSSGIEPDGVILTSV 314
L +A+ +F E+ D+V+W +ISG +R E++ + F M S ++ L SV
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISG--HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI 374
LSA V +LD G VH + + +I++G+++V MY+KC +E A + F + KN
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 375 FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQ 434
WNA++ G A +G + ++ F +M G ++ TF ++L+ C S ++ G ++ +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 435 MISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+I ++ L+ L + D+ + G L++A + M
Sbjct: 454 IIKKK--LAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 41/310 (13%)
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
F M + A+ L IG+ +H + +G+ + + N++V LY C A K FD +
Sbjct: 65 FDEMPQRLALALRIGKA--VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE 122
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRR 228
+DV +W S+++ Y+ G + + F+S+ + PN TF +L C R N+ GR+
Sbjct: 123 -KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR 288
IH + K + + AL+DMY KC+ +S+A+++F + + V WT + SG V+
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
P+E++++F +M G PD + +V
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTV---------------------------------- 267
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPN 408
++ Y + G ++ A F EM ++ WN +++G G A+++F M
Sbjct: 268 -INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 409 EVTFLAILTA 418
T ++L+A
Sbjct: 327 RSTLGSVLSA 336
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 264/549 (48%), Gaps = 62/549 (11%)
Query: 7 NLKWVLLDY-----IRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFV 58
+L W +Y + C + S + HA + +G + N V +V + +
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 59 DFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRN-GFLPDSYTFPAMLK 117
D F + W V S+ NS+I SYA +P++A+ + ++ G PD+ T +L
Sbjct: 180 DARKVFDEMSVWDVVSW--NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 118 SCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS 177
CA G Q+H + ++ +++V N LV +Y C A VF M V+DVVS
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 178 WTSIIAGYARAGLFDEAVTMF--------------------------------------L 199
W +++AGY++ G F++AV +F L
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 200 SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS-------NALMDMY 252
S ++PN T +S+L GC G L G+ IH K + N L+DMY
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 253 VKCECLSEAKQIFHEL-PK-KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE--PDG 308
KC+ + A+ +F L PK +D+V+WT +I G Q ++L L +M + P+
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKR-DIHIGTAMVDMYAKCGCIERALQTFN 367
++ L ACA++ L G+ +H Y R + + ++DMYAKCG I A F+
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
M KN TW +L+ G MHG G AL F+EM G + VT L +L AC HSG++D+
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G +YFN+M + +SP EHY C+ DLL RAG L+ AL L+ MPM P ++ A LS
Sbjct: 598 GMEYFNRM-KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 488 CKDKGILKL 496
C+ G ++L
Sbjct: 657 CRIHGKVEL 665
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 245/524 (46%), Gaps = 55/524 (10%)
Query: 15 YIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSS 74
+I +C + K IH +L++ GI+ +L + + SV + L++ +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYI--SVGCLSHAVSLLRRFPPSDAG 91
Query: 75 -FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +NSLI SY + + + + + PD+YTFP + K+C + G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+ + G + +++V N+LV +Y C A KVFDEM V DVVSW SII YA+ G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 194 AVTMFLSMNVE----PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A+ MF M E P+ T V++L C G +G+++H ++ N L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH--------- 300
DMY KC + EA +F + KD+VSW ++++G Q R ++++ LF KM
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 301 --------------------------SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI 334
SSGI+P+ V L SVLS CA+VG L +G+ +H Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 335 DRRAI--KRDIH-----IGTAMVDMYAKCGCIERALQTFNEMPCK--NIFTWNALLNGLA 385
+ I +++ H + ++DMYAKC ++ A F+ + K ++ TW ++ G +
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 386 MHGRGYAALKFFEEMVGEG--STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
HG AL+ EM E + PN T L AC + G++ + Q N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 444 PRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
P L C+ D+ + G + +A ++ M MA + + +L++
Sbjct: 512 P-LFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 170/346 (49%), Gaps = 27/346 (7%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+++ IS YA A+ RQ++ +G P+ T ++L CA + G +IH I
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 137 KM-------GLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP--VRDVVSWTSIIAGYAR 187
K G + V N L+ +Y C +A +FD + RDVV+WT +I GY++
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 188 AGLFDEAVTMFLSMNVE-----PNTATFVSLLVGCGRSGNLRMGRRIHGLIFK-RASKVS 241
G ++A+ + M E PN T LV C LR+G++IH + + + V
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
L SN L+DMY KC +S+A+ +F + K+ V+WTS+++G +E+L +F +M
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG----TAMVDMYAKCG 357
G + DGV L VL AC++ G +D G EY +R + G +VD+ + G
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGM---EYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 358 CIERALQTFNEMPCK-NIFTWNALLNGLAMHGR----GYAALKFFE 398
+ AL+ EMP + W A L+ +HG+ YAA K E
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITE 675
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 6/263 (2%)
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKKD--IVSWTSIISGLVQCQRPKESLVLFR 297
++L ++ L+ Y+ CLS A + P D + W S+I + L LF
Sbjct: 57 LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
MHS PD V AC + + G H ++ +G A+V MY++C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 358 CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE-GSTPNEVTFLAIL 416
+ A + F+EM ++ +WN+++ A G+ AL+ F M E G P+ +T + +L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
C G G++ ++ + + + C+ D+ + G++DEA + M +
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSE--MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV-K 293
Query: 477 DVLILGALLSACKDKGILKLPTR 499
DV+ A+++ G + R
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVR 316
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 231/426 (54%), Gaps = 12/426 (2%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++IS Y S + A+ + NG DS T ++L +C G+ IH
Sbjct: 219 WNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
IK GL +L+V N L+ LY R KVFD M VRD++SW SII Y A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 196 TMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDM 251
++F M ++P+ T +SL + G++R R + G ++ + + NA++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG-IEPDGVI 310
Y K + A+ +F+ LP D++SW +IISG Q E++ ++ M G I +
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
SVL AC+ G L G +H + + + D+ + T++ DMY KCG +E AL F ++P
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
N WN L+ HG G A+ F+EM+ EG P+ +TF+ +L+AC HSGLVD+G+
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKD 490
F +M+ Y ++P L+HYGCM D+ RAG L+ AL +++M + PD I GALLSAC+
Sbjct: 574 CF-EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 491 KGILKL 496
G + L
Sbjct: 633 HGNVDL 638
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 248/467 (53%), Gaps = 15/467 (3%)
Query: 17 RRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFG--KSVDFVDFGCGFLKQCDWRVSS 74
R C NL+S K +HA+LV S ++N + ++V+ + +V ++ D
Sbjct: 62 RYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD----V 117
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQ-IVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +N +IS Y + I C+ ++ +G PD TFP++LK+C + +G +IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHC 174
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+ +K G + D+YV SL+HLY +A +FDEMPVRD+ SW ++I+GY ++G E
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 194 AVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
A+T+ + ++ T VSLL C +G+ G IH K + L SN L+D+Y
Sbjct: 235 ALTLSNGLRA-MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
+ L + +++F + +D++SW SII ++P ++ LF++M S I+PD + L S
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 314 VLSACANVGDLDYGRWVHEYIDRRA-IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
+ S + +GD+ R V + R+ DI IG A+V MYAK G ++ A FN +P
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRKY 431
++ +WN +++G A +G A++ + M EG N+ T++++L AC +G + +G K
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
+++ L + + D+ + G L++AL L +P V
Sbjct: 474 HGRLLKNGLYLDVFV--VTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 10 WV-LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQC 68
WV +L + L+ K+H +L+ +G+ + VV + D +GK D F +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 69 DWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
RV+S P+N+LI+ + + A++ +++++ G PD TF +L +C+
Sbjct: 514 --RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS-------- 563
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
H ++ G C +Q YG+ + G + D Y RA
Sbjct: 564 ---HSGLVDEGQWCFEMMQTD----YGITPSLKHYGCMVDM---------------YGRA 601
Query: 189 GLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
G + A+ SM+++P+ + + +LL C GN+ +G+ +F+ + + L
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE-HVGYHVLL 660
Query: 249 MDMYV---KCECLSEAKQIFHELPKKDIVSWTSI 279
+MY K E + E + I H + W+S+
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 233/428 (54%), Gaps = 62/428 (14%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCD----DCRSAGKVFDEMPVRDVVSWTSIIAGY 185
QIH + IK G + D ++ D D A K+F++MP R+ SW +II G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 186 ARAGLFDE-----AVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR 236
+ + DE A+T+F M VEPN TF S+L C ++G ++ G++IHGL K
Sbjct: 101 SES---DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKY 157
Query: 237 ASKVSLEASNALMDMYVKCECLSEAKQIFHE----------------------------- 267
+ L+ MYV C + +A+ +F++
Sbjct: 158 GFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDG 217
Query: 268 ----------------LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
+ ++ +VSW ++ISG K+++ +FR+M I P+ V L
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
SVL A + +G L+ G W+H Y + I+ D +G+A++DMY+KCG IE+A+ F +P
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+N+ TW+A++NG A+HG+ A+ F +M G P++V ++ +LTAC H GLV++GR+Y
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
F+QM+S L PR+EHYGCM DLL R+GLLDEA + MP+ PD +I ALL AC+ +
Sbjct: 398 FSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 492 GILKLPTR 499
G +++ R
Sbjct: 457 GNVEMGKR 464
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 59/434 (13%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDF----VDFGCGFLKQ 67
L I C ++ +IHA + SG +R+ L ++ F S D +D+ Q
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATS-DLHHRDLDYAHKIFNQ 84
Query: 68 CDWRVSSFPFNSLISSYAGSDRPQ--IAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLG 124
R + F +N++I ++ SD + IAI + +++ + F+ P+ +TFP++LK+CA
Sbjct: 85 MPQR-NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC--------------------------- 157
I EG QIHG+ +K G D +V ++LV +Y +C
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 158 ------------------DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
DC++A +FD+M R VVSW ++I+GY+ G F +AV +F
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 200 SM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M ++ PN T VS+L R G+L +G +H ++ +AL+DMY KC
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
+ +A +F LP++++++W+++I+G + +++ F KM +G+ P V ++L+
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 317 ACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NI 374
AC++ G ++ G R+ + + ++ I MVD+ + G ++ A + MP K +
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 375 FTWNALLNGLAMHG 388
W ALL M G
Sbjct: 444 VIWKALLGACRMQG 457
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 244/434 (56%), Gaps = 49/434 (11%)
Query: 115 MLKSCAMFLGIGEGMQIHGIVIKMGL--VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV 172
+L+ CA + G ++H ++ GL Y+ N+L Y + +A K+FDE+P+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 173 --RDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGR 227
+D V WT++++ ++R GL ++ +F+ M VE + + V L C + +L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF---------------------- 265
+ HG+ K S++ NALMDMY KC +SE K+IF
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 266 ---------HELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVL 315
HE+P+++ V+WT +++G + +E L L +M G + V L S+L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 316 SACANVGDLDYGRWVHEY-------IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
SACA G+L GRWVH Y + A D+ +GTA+VDMYAKCG I+ ++ F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
M +N+ TWNAL +GLAMHG+G + F +M+ E P+++TF A+L+AC HSG+VD+G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+ F+ + + Y L P+++HY CM DLL RAGL++EA +L+R MP+ P+ ++LG+LL +C
Sbjct: 371 WRCFHSL--RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 489 KDKGILKLPTRYTR 502
G +++ R R
Sbjct: 429 SVHGKVEIAERIKR 442
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 204/461 (44%), Gaps = 51/461 (11%)
Query: 16 IRRCNN---LKSFKKIHAQLVTSGIVR--NDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+R C + L+ K++HA L TSG+ + + + F+ S + V F +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ + +L+SS++ ++ + ++ R D + + CA +G Q
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVC-------------------------------DD 159
HG+ +KMG++ + V N+L+ +YG C +
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 160 CRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE----PNTATFVSLLV 215
+VF EMP R+ V+WT ++AGY AG E + + M N T S+L
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEAS-------NALMDMYVKCECLSEAKQIFHEL 268
C +SGNL +GR +H K+ + EAS AL+DMY KC + + +F +
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 269 PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
K+++V+W ++ SGL + + + +F +M ++PD + T+VLSAC++ G +D G
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNIFTWNALLNGLAMH 387
+ ++ + MVD+ + G IE A EMP N +LL ++H
Sbjct: 372 RCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 388 GRGYAALKFFEEMV--GEGSTPNEVTFLAILTACCHSGLVD 426
G+ A + E++ G+T ++ + A S + D
Sbjct: 432 GKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIAD 472
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 222/399 (55%), Gaps = 4/399 (1%)
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
GF+P++YTF LK+ +HG ++K V D V L+ LY D A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRS 220
KVF+EMP DVV W+ +IA + + G +EAV +F+ M V PN T S+L GC
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
+G ++HGL+ K + + SNAL+D+Y KCE + A ++F EL K+ VSW ++I
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
G ++ +FR+ + + V +S L ACA++ +D G VH +
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA 481
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
+ + + +++DMYAKCG I+ A FNEM ++ +WNAL++G + HG G AL+ + M
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
PN +TFL +L+ C ++GL+D+G++ F MI + + + P LEHY CM LL R+G
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMI-RDHGIEPCLEHYTCMVRLLGRSG 600
Query: 461 LLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
LD+A+ L+ +P P V+I A+LSA ++ + R
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 162/374 (43%), Gaps = 9/374 (2%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
DS+ + AML+ C IH ++K G DL+ N L++ Y + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 168 DEMPVRDVVSWTSIIAGYA---RAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLR 224
DEMP R+ VS+ ++ GYA GL+ +N T +F+ L V ++
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFT-SFLKLFVSLDKA---E 163
Query: 225 MGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
+ +H I K + AL++ Y C + A+ +F + KDIV W I+S V
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
+ ++SL L M +G P+ + L A +G D+ + VH I + D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
+G ++ +Y + G + A + FNEMP ++ W+ ++ +G A+ F M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
PNE T +IL C G + ++ ++L + + + D+ + +D
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDT 401
Query: 465 ALMLVRTMPMAPDV 478
A+ L + +V
Sbjct: 402 AVKLFAELSSKNEV 415
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 9/272 (3%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
I +C+ L +++H +V G + V ++D + K + +D + + +
Sbjct: 360 IGKCSGLG--EQLHGLVVKVGFDLDIYVSNALIDVYAK-CEKMDTAVKLFAELSSK-NEV 415
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++I Y A +R+ +RN TF + L +CA + G+Q+HG+
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
IK + V NSL+ +Y C D + A VF+EM DV SW ++I+GY+ GL +A+
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQAL 535
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRR-IHGLIFKRASKVSLEASNALMDM 251
+ M + +PN TF+ +L GC +G + G+ +I + LE ++ +
Sbjct: 536 RILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRL 595
Query: 252 YVKCECLSEAKQIFHELP-KKDIVSWTSIISG 282
+ L +A ++ +P + ++ W +++S
Sbjct: 596 LGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 240/466 (51%), Gaps = 6/466 (1%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++HA G N+ + +++ + K D ++ + + + + +N ++ +Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCAD-IETALDYFLETEVE-NVVLWNVMLVAYG 466
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
D + + +RQ+ +P+ YT+P++LK+C + G QIH +IK + Y
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---N 202
V + L+ +Y +A + +DVVSWT++IAGY + D+A+T F M
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+ + + + C L+ G++IH L NAL+ +Y +C + E+
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
F + D ++W +++SG Q +E+L +F +M+ GI+ + S + A +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
++ G+ VH I + + + A++ MYAKCG I A + F E+ KN +WNA++N
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
+ HG G AL F++M+ PN VT + +L+AC H GLVDKG YF M S +Y L
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS-EYGL 825
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
SP+ EHY C+ D+L RAGLL A ++ MP+ PD L+ LLSAC
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 21/474 (4%)
Query: 8 LKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ 67
LKW+L ++ +L +K+H+Q++ G+ N + +++ DF+ D G K
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY----GAFKV 142
Query: 68 CDW--RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSC---AMF 122
D + F +N +I A + + ++V P+ TF +L++C ++
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
+ E QIH ++ GL V N L+ LY A +VFD + ++D SW ++I
Sbjct: 203 FDVVE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 183 AGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK 239
+G ++ EA+ +F M + P F S+L C + +L +G ++HGL+ K
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
NAL+ +Y L A+ IF + ++D V++ ++I+GL QC ++++ LF++M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
H G+EPD L S++ AC+ G L G+ +H Y + + I A++++YAKC I
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
E AL F E +N+ WN +L + + + F +M E PN+ T+ +IL C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC--MTDLLCRAGLLDEAL-MLVR 470
G ++ G + +Q+I + L+ Y C + D+ + G LD A +L+R
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIR 550
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 223/470 (47%), Gaps = 8/470 (1%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
++IHA+++ G+ + +V ++D + ++ FVD + S + ++IS +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRN-GFVDLARRVFDGLRLKDHS-SWVAMISGLS 264
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
++ AI + + G +P Y F ++L +C + G Q+HG+V+K+G D Y
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV-- 203
V N+LV LY + SA +F M RD V++ ++I G ++ G ++A+ +F M++
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 204 -EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
EP++ T SL+V C G L G+++H K + + AL+++Y KC + A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
F E +++V W ++ + S +FR+M I P+ S+L C +G
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
DL+ G +H I + + + ++ + ++DMYAK G ++ A K++ +W ++
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
G + AL F +M+ G +EV ++AC + +G++ Q +
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF-- 622
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
S L + L R G ++E+ + A D + AL+S + G
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSG 671
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 250/473 (52%), Gaps = 8/473 (1%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
++HA + SG + V ++ + KS D +D + D N +I+S++
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGD-IDLSEQVFEDLDDIQRQNIVNVMITSFSQ 430
Query: 87 SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYV 146
S +P AI + ++++ G D ++ ++L ++ + G Q+HG +K GLV DL V
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 147 QNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NV 203
+SL LY C + K+F +P +D W S+I+G+ G EA+ +F M
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 204 EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQ 263
P+ +T ++L C +L G+ IHG + ++ +AL++MY KC L A+Q
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 264 IFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
++ LP+ D VS +S+ISG Q ++ +LFR M SG D ++S+L A A +
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 324 LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG 383
G VH YI + + + +G++++ MY+K G I+ + F+++ ++ W AL+
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
A HG+ AL+ + M +G P++VTF+ +L+AC H GLV++ + N M+ + Y +
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV-KDYGIE 786
Query: 444 PRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
P HY CM D L R+G L EA + M + PD L+ G LL+ACK G ++L
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 196/411 (47%), Gaps = 20/411 (4%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDL-VVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSS 74
R NL++ K + A L+ ++ D+ + K ++ ++ S D F + Q D
Sbjct: 60 RLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPD----V 115
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG--IGEGMQIH 132
N +IS Y + ++ + ++ GF + ++ +++ +C+ E + H
Sbjct: 116 VSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
IKMG V+++L+ ++ A KVF + +V W +IIAG R +
Sbjct: 176 --TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 193 EAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+F M V +P++ T+ S+L C LR G+ + + K ++ + A++
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIV 292
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
D+Y KC ++EA ++F +P +VSWT ++SG + +L +F++M SG+E +
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF--- 366
+TSV+SAC + VH ++ + D + A++ MY+K G I+ + Q F
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
+++ +NI N ++ + + A++ F M+ EG +E + ++L+
Sbjct: 413 DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ +LI+SYA + A+ Y + GF PD TF +L +C+ HG
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-----------HG--- 766
Query: 137 KMGLVCDLYVQ-NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
GLV + Y NS+V YG+ + R + ++ R+G EA
Sbjct: 767 --GLVEESYFHLNSMVKDYGIEPENRH---------------YVCMVDALGRSGRLREAE 809
Query: 196 TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ +M+++P+ + +LL C G + +G+ + K+A + LE S+A
Sbjct: 810 SFINNMHIKPDALVWGTLLAACKIHGEVELGK----VAAKKA--IELEPSDA 855
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 265/516 (51%), Gaps = 45/516 (8%)
Query: 19 CNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
C ++++F ++HA ++SG+ + ++V ++V F+ + + + ++ D +
Sbjct: 53 CVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFY-SAFNLHNEAQSIIENSD-ILHPL 110
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
P+N LI+SYA ++ + I Y+++V G PD++T+P++LK+C L + G +HG +
Sbjct: 111 PWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSI 170
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
LYV N+L+ +Y + A ++FD M RD VSW ++I YA G++ EA
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGN------------------------------ 222
+F M VE + T+ + GC ++GN
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 223 -----LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
+R+G+ IHGL + N L+ MY KC+ L A +F + + + +W
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
SIISG Q + +E+ L R+M +G +P+ + L S+L CA + +L +G+ H YI RR
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 338 AIKRD-IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
+D + ++VD+YAK G I A Q + M ++ T+ +L++G G G AL
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
F+EM G P+ VT +A+L+AC HS LV +G + F +M +Y + P L+H+ CM DL
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM-QCEYGIRPCLQHFSCMVDLY 529
Query: 457 CRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
RAG L +A ++ MP P LL+AC G
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 38/360 (10%)
Query: 110 YTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE 169
++ ++L +C G+Q+H I G+ + LV Y + A + +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 170 MPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMG 226
+ + W +IA YA+ LF+E + + +S + P+ T+ S+L CG + ++ G
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC 286
R +HG I + K SL NAL+ MY + + A+++F + ++D VSW ++I+
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 287 QRPKESLVLFRKMHSSGIEP-----------------------------------DGVIL 311
E+ LF KM SG+E D V +
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM 283
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
L AC+ +G + G+ +H + ++ ++ MY+KC + AL F +
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE 343
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
++ TWN++++G A + A EM+ G PN +T +IL C + G+++
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRN-DLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP 76
R NL+ K+ H ++ ++ ++ +VD + KS V + +
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV--AAKQVSDLMSKRDEVT 450
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ SLI Y +A+ ++++ R+G PD T A+L +C+ + EG ++
Sbjct: 451 YTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF---- 506
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
M + C+ ++ L H ++ ++ Y RAG +A
Sbjct: 507 -MKMQCEYGIRPCLQH-------------------------FSCMVDLYGRAGFLAKAKD 540
Query: 197 MFLSMNVEPNTATFVSLLVGCGRSGNLRMGR 227
+ +M +P+ AT+ +LL C GN ++G+
Sbjct: 541 IIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 263/477 (55%), Gaps = 10/477 (2%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
++H L+ SG N + ++D + K + + F + V S+ ++L+S +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSW--SALMSGHVL 84
Query: 87 SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYV 146
+ + ++ + ++ R G P+ +TF LK+C + + +G+QIHG +K+G + V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 147 QNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NV 203
NSLV +Y C A KVF + R ++SW ++IAG+ AG +A+ F M N+
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 204 E--PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS--NALMDMYVKCECLS 259
+ P+ T SLL C +G + G++IHG + + A+ +L+D+YVKC L
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 260 EAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA 319
A++ F ++ +K ++SW+S+I G Q E++ LF+++ + D L+S++ A
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
+ L G+ + + + + ++VDMY KCG ++ A + F EM K++ +W
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
++ G HG G +++ F EM+ P+EV +LA+L+AC HSG++ +G + F++++ +
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL-ET 443
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ + PR+EHY C+ DLL RAG L EA L+ TMP+ P+V I LLS C+ G ++L
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 193/382 (50%), Gaps = 14/382 (3%)
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+G Q+H ++K G +L N L+ +Y C + A KVFD MP R+VVSW+++++G+
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 187 RAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
G ++++F M + PN TF + L CG L G +IHG K ++ +E
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
N+L+DMY KC ++EA+++F + + ++SW ++I+G V ++L F M +
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 304 IE--PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK--RDIHIGTAMVDMYAKCGCI 359
I+ PD LTS+L AC++ G + G+ +H ++ R I ++VD+Y KCG +
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
A + F+++ K + +W++L+ G A G A+ F+ + S + +I+
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEH--YGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
L+ +G+ QM + L LE + D+ + GL+DEA M + D
Sbjct: 324 ADFALLRQGK----QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-KD 378
Query: 478 VLILGALLSACKDKGILKLPTR 499
V+ +++ G+ K R
Sbjct: 379 VISWTVVITGYGKHGLGKKSVR 400
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 5/265 (1%)
Query: 205 PNT-ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQ 263
PN VS+L C R G G ++H + K S ++L SN L+DMY KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 264 IFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
+F +P++++VSW++++SG V K SL LF +M GI P+ ++ L AC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 324 LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG 383
L+ G +H + + + + +G ++VDMY+KCG I A + F + +++ +WNA++ G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 384 LAMHGRGYAALKFFEEMVGEGST---PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
G G AL F M+ E + P+E T ++L AC +G++ G++ ++ +
Sbjct: 183 FVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEA 465
+ G + DL + G L A
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSA 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
L S+L C G D G VH Y+ + ++ ++DMY KC A + F+ MP
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+N+ +W+AL++G ++G +L F EM +G PNE TF L AC ++KG +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVR 470
+ + + +E + D+ + G ++EA + R
Sbjct: 129 IHGFCLKIGFEM--MVEVGNSLVDMYSKCGRINEAEKVFR 166
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 218/409 (53%), Gaps = 42/409 (10%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
PD YTFP +LK+C+ I G +IHG K+GL L+V N LV +YG C A V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNL 223
DEM RDVVSW S++ GYA+ FD+A+ + S+ + + T SLL +
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
+ MYVK +F ++ KK +VSW +I
Sbjct: 258 NV-------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
++ P E++ L+ +M + G EPD V +TSVL AC + L G+ +H YI+R+ + ++
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ A++DMYAKCGC+E+A F M +++ +W A+++ GRG A+ F ++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G P+ + F+ L AC H+GL+++GR F ++++ Y ++PRLEH CM DLL RAG +
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCF-KLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 464 EALMLVRTMPMAPDVLILGALLSACK-----DKGILKLPTRYTRPPHRA 507
EA ++ M M P+ + GALL AC+ D G+L + P ++
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 167/360 (46%), Gaps = 39/360 (10%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H +I L C+ + L+ Y D SA KVFDE+P R+V+ +I Y G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ E V +F +M NV P+ TF +L C SG + +GR+IHG K +L N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L+ MY KC LSEA+ + E+ ++D+VSW S++ G Q QR ++L + R+M S I D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ S+L A +N T MY K F
Sbjct: 241 AGTMASLLPAVSNT-------------------------TTENVMYVK--------DMFF 267
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
+M K++ +WN ++ + A++ + M +G P+ V+ ++L AC + +
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G+K + ++ L P L + D+ + G L++A + M + DV+ A++SA
Sbjct: 328 GKKIHGYI--ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISA 384
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N +I Y + P A+ Y ++ +GF PD+ + ++L +C + G +IHG +
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+ L+ +L ++N+L+ +Y C A VF+ M RDVVSWT++I+ Y +G +AV
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 197 MFLSMN---VEPNTATFVSLLVGCGRSGNLRMGR 227
+F + + P++ FV+ L C +G L GR
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 7/278 (2%)
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
++R R +H I + + LM Y + ++ A+++F E+P+++++ +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
V E + +F M + PD VL AC+ G + GR +H + +
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+ +G +V MY KCG + A +EM +++ +WN+L+ G A + R AL+ EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+ + T ++L A S + Y M + S L + M + + +
Sbjct: 234 SVKISHDAGTMASLLPAV--SNTTTENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAM 289
Query: 462 LDEALMLVRTMP---MAPDVLILGALLSACKDKGILKL 496
EA+ L M PD + + ++L AC D L L
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 259/498 (52%), Gaps = 25/498 (5%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP------FNS 79
++IH +V G+ + V ++ + K CG + + + S +N+
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSK--------CGMVGEAETVFSCVVDKRLEIWNA 343
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
++++YA +D A+ + + + LPDS+T ++ C++ G +H + K
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
+ ++++L+ LY C A VF M +D+V+W S+I+G + G F EA+ +F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 200 SM-----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
M +++P++ S+ C LR G ++HG + K +++ ++L+D+Y K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
C A ++F + +++V+W S+IS + P+ S+ LF M S GI PD V +TSV
Sbjct: 524 CGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSV 583
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI 374
L A ++ L G+ +H Y R I D H+ A++DMY KCG + A F +M K++
Sbjct: 584 LVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 375 FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQ 434
TWN ++ G HG AL F+EM G +P++VTFL++++AC HSG V++G+ F +
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-E 702
Query: 435 MISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK----- 489
+ Q Y + P +EHY M DLL RAGLL+EA ++ MP+ D I LLSA +
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 490 DKGILKLPTRYTRPPHRA 507
+ GIL P R
Sbjct: 763 ELGILSAEKLLRMEPERG 780
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 223/485 (45%), Gaps = 37/485 (7%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL NL K IH +V G + + +V+ + K CGFL D+
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVK--------CGFL---DYA 114
Query: 72 VSSFP----------------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAM 115
V F +NS+I Y R + + C+R+++ G PD+++ +
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 116 LKSCAMFLGI--GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR 173
+ EG QIHG +++ L D +++ +L+ +Y A +VF E+ +
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 174 -DVVSWTSIIAGYARAGLFDEAVTMFL---SMNVEPNTATFVSLLVGCGRSGNLRMGRRI 229
+VV W +I G+ +G+ + ++ +++ + +V+ + +F L C +S N GR+I
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 230 HGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRP 289
H + K +L+ MY KC + EA+ +F + K + W ++++ +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
+L LF M + PD L++V+S C+ +G +YG+ VH + +R I+ I +A+
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL 414
Query: 350 VDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST--P 407
+ +Y+KCGC A F M K++ W +L++GL +G+ ALK F +M + + P
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 474
Query: 408 NEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALM 467
+ ++ AC + G + MI L+ + + DL + GL + AL
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG--SSLIDLYSKCGLPEMALK 532
Query: 468 LVRTM 472
+ +M
Sbjct: 533 VFTSM 537
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 17/400 (4%)
Query: 105 FLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAG 164
F +TFP++LK+C+ + G IHG V+ +G D ++ SLV++Y C A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAV 115
Query: 165 KVFD-------EMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLL 214
+VFD + RDV W S+I GY + F E V F L V P+ + ++
Sbjct: 116 QVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 215 VGCGRSGNLRM--GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-KK 271
+ GN R G++IHG + + + AL+DMY K +A ++F E+ K
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
++V W +I G + SL L+ ++ ++ T L AC+ + +GR +H
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
+ + + D ++ T+++ MY+KCG + A F+ + K + WNA++ A + GY
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 392 AALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC 451
+AL F M + P+ T +++ C GL + G+ ++ + + +E
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SA 413
Query: 452 MTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA-CKD 490
+ L + G +A ++ ++M D++ G+L+S CK+
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKN 452
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 223/375 (59%), Gaps = 15/375 (4%)
Query: 130 QIHGIVIKMGL-VCDLYVQNSLVHLYGVC----DDCRSAGKVFD--EMPVRDVVSWTSII 182
QIH I+ G+ + D + L+ Y V A KVF E P+ +V W ++I
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPI-NVFIWNTLI 92
Query: 183 AGYARAGLFDEAVTMFLSMNV----EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
GYA G A +++ M V EP+T T+ L+ ++R+G IH ++ +
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+ N+L+ +Y C ++ A ++F ++P+KD+V+W S+I+G + +P+E+L L+ +
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M+S GI+PDG + S+LSACA +G L G+ VH Y+ + + R++H ++D+YA+CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG-EGSTPNEVTFLAILT 417
+E A F+EM KN +W +L+ GLA++G G A++ F+ M EG P E+TF+ IL
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
AC H G+V +G +YF +M ++Y + PR+EH+GCM DLL RAG + +A +++MPM P+
Sbjct: 333 ACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 391
Query: 478 VLILGALLSACKDKG 492
V+I LL AC G
Sbjct: 392 VVIWRTLLGACTVHG 406
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 216/400 (54%), Gaps = 25/400 (6%)
Query: 11 VLLDYIRRCNNL---------KSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDF---V 58
+LL + +C NL ++IHA + G+ +D + + + F+ S+ +
Sbjct: 10 LLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPM 69
Query: 59 DFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLK 117
+ + + ++ F +N+LI YA A YR++ +G + PD++T+P ++K
Sbjct: 70 SYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 118 SCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS 177
+ + G IH +VI+ G +YVQNSL+HLY C D SA KVFD+MP +D+V+
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 178 WTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
W S+I G+A G +EA+ ++ MN ++P+ T VSLL C + G L +G+R+H +
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 235 KRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
K +L +SN L+D+Y +C + EAK +F E+ K+ VSWTS+I GL KE++
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 295 LFRKMHSS-GIEPDGVILTSVLSACANVG----DLDYGRWVHEYIDRRAIKRDIHIGTAM 349
LF+ M S+ G+ P + +L AC++ G +Y R + E + + R H G M
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE--EYKIEPRIEHFG-CM 366
Query: 350 VDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
VD+ A+ G +++A + MP + N+ W LL +HG
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 218/409 (53%), Gaps = 42/409 (10%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
PD YTFP +LK+C+ I G +IHG K+GL L+V N LV +YG C A V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNL 223
DEM RDVVSW S++ GYA+ FD+A+ + S+ + + T SLL +
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE 257
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
+ MYVK +F ++ KK +VSW +I
Sbjct: 258 NV-------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
++ P E++ L+ +M + G EPD V +TSVL AC + L G+ +H YI+R+ + ++
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ A++DMYAKCGC+E+A F M +++ +W A+++ GRG A+ F ++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G P+ + F+ L AC H+GL+++GR F ++++ Y ++PRLEH CM DLL RAG +
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCF-KLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 464 EALMLVRTMPMAPDVLILGALLSACK-----DKGILKLPTRYTRPPHRA 507
EA ++ M M P+ + GALL AC+ D G+L + P ++
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 167/360 (46%), Gaps = 39/360 (10%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H +I L C+ + L+ Y D SA KVFDE+P R+V+ +I Y G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ E V +F +M NV P+ TF +L C SG + +GR+IHG K +L N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L+ MY KC LSEA+ + E+ ++D+VSW S++ G Q QR ++L + R+M S I D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ S+L A +N T MY K F
Sbjct: 241 AGTMASLLPAVSNT-------------------------TTENVMYVK--------DMFF 267
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
+M K++ +WN ++ + A++ + M +G P+ V+ ++L AC + +
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G+K + ++ L P L + D+ + G L++A + M + DV+ A++SA
Sbjct: 328 GKKIHGYI--ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISA 384
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N +I Y + P A+ Y ++ +GF PD+ + ++L +C + G +IHG +
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+ L+ +L ++N+L+ +Y C A VF+ M RDVVSWT++I+ Y +G +AV
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 197 MFLSMN---VEPNTATFVSLLVGCGRSGNLRMGR 227
+F + + P++ FV+ L C +G L GR
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 7/278 (2%)
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
++R R +H I + + LM Y + ++ A+++F E+P+++++ +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
V E + +F M + PD VL AC+ G + GR +H + +
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+ +G +V MY KCG + A +EM +++ +WN+L+ G A + R AL+ EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+ + T ++L A S + Y M + S L + M + + +
Sbjct: 234 SVKISHDAGTMASLLPAV--SNTTTENVMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAM 289
Query: 462 LDEALMLVRTMP---MAPDVLILGALLSACKDKGILKL 496
EA+ L M PD + + ++L AC D L L
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 222/417 (53%), Gaps = 8/417 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++IS Y ++ +I +R ++ D+ T +L + A + GMQIH +
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
K G YV + LY C + +F E D+V++ ++I GY G + ++
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
++F + ++T VSL+ SG+L + IHG K S AL +Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
K + A+++F E P+K + SW ++ISG Q ++++ LFR+M S P+ V +T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
+LSACA +G L G+WVH+ + + I++ TA++ MYAKCG I A + F+ M K
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
N TWN +++G +HG+G AL F EM+ G TP VTFL +L AC H+GLV +G + F
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 433 NQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
N MI +Y P ++HY CM D+L RAG L AL + M + P + LL AC+
Sbjct: 545 NSMI-HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 201/435 (46%), Gaps = 28/435 (6%)
Query: 9 KWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDL-----VVKRVVD----FFGKSVDFVD 59
K LD+ +R ++ + HAQ++ G RND+ + +R+ D ++ + +
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGF-RNDISLLTKLTQRLSDLGAIYYARDI---- 74
Query: 60 FGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKS 118
FL R F FN L+ ++ ++ P ++ + + ++ L P+S T+ + +
Sbjct: 75 ----FLSV--QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 119 CAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSW 178
+ F G IHG + G +L + +++V +Y A KVFD MP +D + W
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 179 TSIIAGYARAGLFDEAVTMFLSMNVEP----NTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
++I+GY + ++ E++ +F + E +T T + +L LR+G +IH L
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 235 KRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
K + +Y KC + +F E K DIV++ ++I G + SL
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA 354
LF+++ SG L S++ G L +H Y + + TA+ +Y+
Sbjct: 309 LFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 365
Query: 355 KCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
K IE A + F+E P K++ +WNA+++G +G A+ F EM +PN VT
Sbjct: 366 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 415 ILTACCHSGLVDKGR 429
IL+AC G + G+
Sbjct: 426 ILSACAQLGALSLGK 440
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 245/441 (55%), Gaps = 12/441 (2%)
Query: 55 VDFVDFGCGFLKQCD---WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYT 111
++ + F FL +C R ++ + IS A D+ +++ Y N L
Sbjct: 1 MNILGFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHE-- 58
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
+L+ CA + E HG +I++ L D+ + N L++ Y C A +VFD M
Sbjct: 59 ---ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 115
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRR 228
R +VSW ++I Y R + EA+ +FL M E + T S+L CG + + ++
Sbjct: 116 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 175
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR 288
+H L K ++L AL+D+Y KC + +A Q+F + K V+W+S+++G VQ +
Sbjct: 176 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 235
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+E+L+L+R+ +E + L+SV+ AC+N+ L G+ +H I + ++ + ++
Sbjct: 236 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 295
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPN 408
VDMYAKCG + + F+E+ KN+ WN +++G A H R + FE+M +G PN
Sbjct: 296 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 355
Query: 409 EVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
EVTF ++L+ C H+GLV++GR++F +++ Y LSP + HY CM D+L RAGLL EA L
Sbjct: 356 EVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 414
Query: 469 VRTMPMAPDVLILGALLSACK 489
++++P P I G+LL++C+
Sbjct: 415 IKSIPFDPTASIWGSLLASCR 435
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 170/332 (51%), Gaps = 9/332 (2%)
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++I Y + A+ + ++ GF +T ++L +C + E ++H +
Sbjct: 121 SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLS 180
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
+K + +LYV +L+ LY C + A +VF+ M + V+W+S++AGY + ++EA+
Sbjct: 181 VKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEAL 240
Query: 196 TMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
++ M++E N T S++ C L G+++H +I K ++ +++ +DMY
Sbjct: 241 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 300
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
KC L E+ IF E+ +K++ W +IISG + RPKE ++LF KM G+ P+ V +
Sbjct: 301 AKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 360
Query: 313 SVLSACANVGDLDYGRWVHEYI-DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
S+LS C + G ++ GR + + + ++ + MVD+ + G + A + +P
Sbjct: 361 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF 420
Query: 372 KNIFT-WNALLNGLAMHGR----GYAALKFFE 398
+ W +LL ++ AA K FE
Sbjct: 421 DPTASIWGSLLASCRVYKNLELAEVAAEKLFE 452
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 19/268 (7%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLK------QCDWRVSSFPFNS 79
KK+H V + I N V ++D + K CG +K + SS ++S
Sbjct: 174 KKLHCLSVKTCIDLNLYVGTALLDLYAK--------CGMIKDAVQVFESMQDKSSVTWSS 225
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
+++ Y + + A+L YR+ R + +T +++ +C+ + EG Q+H ++ K G
Sbjct: 226 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 285
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
+++V +S V +Y C R + +F E+ +++ W +II+G+A+ E + +F
Sbjct: 286 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 345
Query: 200 SMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNALMDMYVKC 255
M + PN TF SLL CG +G + GRR L+ ++ + ++D+ +
Sbjct: 346 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 405
Query: 256 ECLSEAKQIFHELPKKDIVS-WTSIISG 282
LSEA ++ +P S W S+++
Sbjct: 406 GLLSEAYELIKSIPFDPTASIWGSLLAS 433
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/492 (30%), Positives = 258/492 (52%), Gaps = 38/492 (7%)
Query: 10 WVLLDYIRRCNNLKS------FKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCG 63
+ L+ + C+NL K++HA + G + N ++ +V +GK G
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGK--------LG 250
Query: 64 FLKQCDWRVSSF------PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLK 117
L + SF +N+++SS +++ A+ R++V G PD +T ++L
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 118 SCAMFLGIGEGMQIHGIVIKMG-LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
+C+ + G ++H +K G L + +V ++LV +Y C S +VFD M R +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSMNVEP----NTATFVSLLVGCGRSGNLRMGRRIHGL 232
W ++IAGY++ EA+ +F+ M N+ T ++ C RSG IHG
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
+ KR N LMDMY + + A +IF ++ +D+V+W ++I+G V + +++
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 293 LVLFRKMH------SSG-----IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
L+L KM S G ++P+ + L ++L +CA + L G+ +H Y + +
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
D+ +G+A+VDMYAKCGC++ + + F+++P KN+ TWN ++ MHG G A+ M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+G PNEVTF+++ AC HSG+VD+G + F M Y + P +HY C+ DLL RAG
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVM-KPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 462 LDEALMLVRTMP 473
+ EA L+ MP
Sbjct: 670 IKEAYQLMNMMP 681
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 212/430 (49%), Gaps = 16/430 (3%)
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
L+ S S+ + A+L Y ++ G PD+Y FPA+LK+ A + G QIH V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 140 LVCD-LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA---GYARAGLFDEAV 195
D + V N+LV+LY C D + KVFD + R+ VSW S+I+ + + + EA
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 196 TMFLSMNVEPNTATFVSLLVGCGR---SGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
L NVEP++ T VS++ C L MG+++H ++ S N L+ MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMY 246
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
K L+ +K + +D+V+W +++S L Q ++ E+L R+M G+EPD ++
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 313 SVLSACANVGDLDYGRWVHEY-IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
SVL AC+++ L G+ +H Y + ++ + +G+A+VDMY C + + F+ M
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEM-VGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+ I WNA++ G + + AL F M G N T ++ AC SG +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP----MAPDVLILGALLS 486
++ + + +++ + D+ R G +D A+ + M + + +I G + S
Sbjct: 427 IHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 487 ACKDKGILKL 496
+ +L L
Sbjct: 485 EHHEDALLLL 494
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 230/485 (47%), Gaps = 31/485 (6%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGI-VRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
LL + +++ K+IHA + G V + V +V+ + K DF G + +
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF-----GAVYKVFD 157
Query: 71 RVSS---FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA---MFLG 124
R+S +NSLISS ++ ++A+ +R ++ P S+T +++ +C+ M G
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAG 184
+ G Q+H ++ G + + ++ N+LV +YG S+ + RD+V+W ++++
Sbjct: 218 LMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 185 YARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KV 240
+ EA+ M VEP+ T S+L C LR G+ +H K S
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM- 299
+ +AL+DMY C+ + +++F + + I W ++I+G Q + KE+L+LF M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
S+G+ + + V+ AC G +H ++ +R + RD + ++DMY++ G I
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM------VGEGST-----PN 408
+ A++ F +M +++ TWN ++ G AL +M V +G++ PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 409 EVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
+T + IL +C + KG++ I NL+ + + D+ + G L + +
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 469 VRTMP 473
+P
Sbjct: 575 FDQIP 579
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 133/260 (51%), Gaps = 8/260 (3%)
Query: 178 WTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
W ++ R+ L EAV ++ M ++P+ F +LL ++ +G++IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 235 KRASKV-SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
K V S+ +N L+++Y KC ++F + +++ VSW S+IS L ++ + +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANV---GDLDYGRWVHEYIDRRAIKRDIHIGTAMV 350
FR M +EP L SV++AC+N+ L G+ VH Y R+ I T +V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LV 243
Query: 351 DMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEV 410
MY K G + + +++ TWN +L+ L + + AL++ EMV EG P+E
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 411 TFLAILTACCHSGLVDKGRK 430
T ++L AC H ++ G++
Sbjct: 304 TISSVLPACSHLEMLRTGKE 323
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 240/421 (57%), Gaps = 8/421 (1%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQIH 132
++ +N LI Y+ + +++R G PD YTFP ++K C+ + G +H
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVH 133
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
G+V+++G D+ V S V YG C D SA KVF EMP R+ VSWT+++ Y ++G +
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE 193
Query: 193 EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
EA +MF + E N ++ +L+ G +SG+L ++ +F K + + +++D Y
Sbjct: 194 EAKSMF-DLMPERNLGSWNALVDGLVKSGDLVNAKK----LFDEMPKRDIISYTSMIDGY 248
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
K + A+ +F E D+ +W+++I G Q +P E+ +F +M + ++PD I+
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIH-IGTAMVDMYAKCGCIERALQTFNEMPC 371
++SAC+ +G + V Y+ +R K H + A++DM AKCG ++RA + F EMP
Sbjct: 309 GLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ 368
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+++ ++ +++ G+A+HG G A++ FE+MV EG P+EV F IL C S LV++G +Y
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
F +++ ++Y++ +HY C+ +LL R G L EA L+++MP G+LL C
Sbjct: 429 F-ELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH 487
Query: 492 G 492
G
Sbjct: 488 G 488
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 33/262 (12%)
Query: 264 IFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI-EPDGVILTSVLSACANVG 322
+F +P W +I G E++ + +M +G+ PD V+ C+N G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
+ G VH + R +D+ +GT+ VD Y KC + A + F EMP +N +W AL+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY-N 441
G A F+ M N ++ A++ SG + +K F++M + +
Sbjct: 185 AYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALML-VRTMP--------------------------M 474
+ ++ Y D++ L +EA + VR +
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 475 APDVLILGALLSACKDKGILKL 496
PD I+ L+SAC G +L
Sbjct: 301 KPDEFIMVGLMSACSQMGCFEL 322
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 237/455 (52%), Gaps = 37/455 (8%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPD--SYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N LI Y+ S A+ Y ++R+ F + T MLK + + G QIHG
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF----DEMPV------------------ 172
VIK+G L V + L+++Y A KVF D V
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 173 --------RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSG 221
+D VSW ++I G A+ GL EA+ F M V+ + F S+L CG G
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
+ G++IH I + + + +AL+DMY KC+CL AK +F + +K++VSWT+++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G Q R +E++ +F M SGI+PD L +SACANV L+ G H +
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+ + ++V +Y KCG I+ + + FNEM ++ +W A+++ A GR ++ F++MV
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
G P+ VT +++AC +GLV+KG++YF M S +Y + P + HY CM DL R+G
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS-EYGIVPSIGHYSCMIDLFSRSGR 523
Query: 462 LDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
L+EA+ + MP PD + LLSAC++KG L++
Sbjct: 524 LEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 166/314 (52%), Gaps = 5/314 (1%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
S + ++I A + + AI C+R++ G D Y F ++L +C I EG QIH
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+I+ +YV ++L+ +Y C A VFD M ++VVSWT+++ GY + G +E
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
AV +FL M ++P+ T + C +L G + HG + SN+L+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
+Y KC + ++ ++F+E+ +D VSWT+++S Q R E++ LF KM G++PDGV
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 311 LTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
LT V+SAC+ G ++ G R+ I I + M+D++++ G +E A++ N M
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 370 PC-KNIFTWNALLN 382
P + W LL+
Sbjct: 535 PFPPDAIGWTTLLS 548
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 212/503 (42%), Gaps = 118/503 (23%)
Query: 109 SYTFPAMLKSCAMFLGIGEGMQ------IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS 162
S + +K C +G+G Q IHG +I+ + ++ N++VH Y +
Sbjct: 3 SNYYSVQIKQC---IGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTY 59
Query: 163 AGKVFD-------------------------------EMPVRDVVSWTSIIAGYARAGLF 191
A +VFD ++P RD V+W +I GY+ +GL
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 192 DEAV----TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
AV TM + T +++L +G++ +G++IHG + K + L +
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 248 LMDMYVKCECLSEAKQIFHELP------------------------------KKDIVSWT 277
L+ MY C+S+AK++F+ L +KD VSW
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWA 239
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
++I GL Q KE++ FR+M G++ D SVL AC +G ++ G+ +H I R
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+ I++G+A++DMY KC C+ A F+ M KN+ +W A++ G GR A+K F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY----GCMT 453
+M G P+ T ++AC + +++G ++ + I+ L HY +
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG------LIHYVTVSNSLV 413
Query: 454 DLLCRAGLLDEALMLVRTMP----------------------------------MAPDVL 479
L + G +D++ L M + PD +
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 480 ILGALLSACKDKGILKLPTRYTR 502
L ++SAC G+++ RY +
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFK 496
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 10 WVLLDYIRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLK 66
+ L I C N+ S + + H + +TSG++ V +V +GK D +D
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD-IDDSTRLFN 430
Query: 67 QCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG 126
+ + R + + +++S+YA R I + ++V++G PD T ++ +C+ +
Sbjct: 431 EMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+G + + + YG+ V + ++ +I ++
Sbjct: 490 KGQRYFKL---------------MTSEYGI---------------VPSIGHYSCMIDLFS 519
Query: 187 RAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGR 227
R+G +EA+ M P+ + +LL C GNL +G+
Sbjct: 520 RSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 214/400 (53%), Gaps = 42/400 (10%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
QIHG V++ GL Y+ L+ GV D A +V + + R+ WT++I GYA
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 187 RAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
G FDEA+ M+ M E P + TF +LL CG +L +GR+ H F+ +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII----------------------- 280
N ++DMYVKCE + A+++F E+P++D++SWT +I
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 281 --------SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
+G Q +P+E+L F +M SGI D V + +SACA +G Y +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 333 YIDRRAIKRDIH--IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
+ H IG+A++DMY+KCG +E A+ F M KN+FT+++++ GLA HGR
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 391 YAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
AL F MV + PN VTF+ L AC HSGLVD+GR+ F+ M Q + + P +HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY-QTFGVQPTRDHY 424
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
CM DLL R G L EAL L++TM + P + GALL AC+
Sbjct: 425 TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 192/418 (45%), Gaps = 45/418 (10%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK-SVDFVDFGCGFLKQCDW 70
L+ + C NL K+IH ++ G+ ++ ++ +++ K V + ++ +
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R + F + ++I YA + AI Y + + P S+TF A+LK+C + G Q
Sbjct: 112 R-NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
H ++ C +YV N+++ +Y C+ A KVFDEMP RDV+SWT +IA YAR G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 191 FDEAVTMFLSM-----------------NVEPNTA-----------------TFVSLLVG 216
+ A +F S+ N +P A T +
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVS--LEASNALMDMYVKCECLSEAKQIFHELPKKDIV 274
C + G + R + K S + +AL+DMY KC + EA +F + K++
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 275 SWTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
+++S+I GL R +E+L LF M + I+P+ V L AC++ G +D GR V +
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 334 IDRR---AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMH 387
+ + RD + T MVD+ + G ++ AL+ M + + W ALL +H
Sbjct: 411 MYQTFGVQPTRDHY--TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 207/355 (58%), Gaps = 38/355 (10%)
Query: 175 VVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCG--RSGNLRMGRRI 229
VSWTS I R G EA F M VEPN TF++LL GCG SG+ +G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 230 HG--------------------------------LIFKRASKVSLEASNALMDMYVKCEC 257
HG L+F + N ++D Y++
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+ A ++F ++P++D++SWT++I+G V+ +E+L+ FR+M SG++PD V + + L+A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
C N+G L +G WVH Y+ + K ++ + +++D+Y +CGC+E A Q F M + + +W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
N+++ G A +G + +L +F +M +G P+ VTF LTAC H GLV++G +YF Q++
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF-QIMK 334
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
Y +SPR+EHYGC+ DL RAG L++AL LV++MPM P+ +++G+LL+AC + G
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 159/325 (48%), Gaps = 41/325 (12%)
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGE--GMQIHGIVIKMGL----------VCDLYVQ---- 147
G P+ TF A+L C F E G +HG K+GL + +Y +
Sbjct: 66 GVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRF 125
Query: 148 ------------------NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
N+++ Y +A K+FD+MP RD++SWT++I G+ + G
Sbjct: 126 KKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKG 185
Query: 190 LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+EA+ F M V+P+ ++ L C G L G +H + + K ++ SN
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+D+Y +C C+ A+Q+F+ + K+ +VSW S+I G ESLV FRKM G +P
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYI--DRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
D V T L+AC++VG ++ G + + D R R H G +VD+Y++ G +E AL+
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYG-CLVDLYSRAGRLEDALK 364
Query: 365 TFNEMPCK-NIFTWNALLNGLAMHG 388
MP K N +LL + HG
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 40/252 (15%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ ++I+ + + A+L +R++ +G PD A L +C + G+ +H V+
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
++ V NSL+ LY C A +VF M R VVSW S+I G+A G E++
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 197 MFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS--LEASNALMDM 251
F M +P+ TF L C G + G R + I K ++S +E L+D+
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDL 352
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y + L +A ++ +P K P+ V++
Sbjct: 353 YSRAGRLEDALKLVQSMPMK----------------------------------PNEVVI 378
Query: 312 TSVLSACANVGD 323
S+L+AC+N G+
Sbjct: 379 GSLLAACSNHGN 390
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 229/405 (56%), Gaps = 36/405 (8%)
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
E +I+ +I GL ++ +V +D A ++F+++ +V + SII Y
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 187 RAGLFDEAVTMF---LSMNVE-PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSL 242
L+ + + ++ L + E P+ TF + C G+ +G+++HG + K + +
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 243 EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG---LVQCQRPK--------- 290
NAL+DMY+K + L +A ++F E+ ++D++SW S++SG L Q ++ K
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 291 -------------------ESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
E++ FR+M +GIEPD + L SVL +CA +G L+ G+W+H
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
Y +RR + + A+++MY+KCG I +A+Q F +M K++ +W+ +++G A HG +
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 392 AALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC 451
A++ F EM PN +TFL +L+AC H G+ +G +YF+ M+ Q Y + P++EHYGC
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD-MMRQDYQIEPKIEHYGC 383
Query: 452 MTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ D+L RAG L+ A+ + +TMPM PD I G+LLS+C+ G L +
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 214/427 (50%), Gaps = 39/427 (9%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
+ +++R + +KKI+A ++ G+ ++ +V ++VDF K D +D+ Q
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIED-MDYATRLFNQVS-N 70
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ F +NS+I +Y + I Y+Q++R F LPD +TFP M KSCA G Q
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR--- 187
+HG + K G + +N+L+ +Y DD A KVFDEM RDV+SW S+++GYAR
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 188 ----AGLFD------------------------EAVTMFLSMN---VEPNTATFVSLLVG 216
GLF EA+ F M +EP+ + +S+L
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
C + G+L +G+ IH +R NAL++MY KC +S+A Q+F ++ KD++SW
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYID 335
+++ISG ++ F +M + ++P+G+ +LSAC++VG G R+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAAL 394
I+ I ++D+ A+ G +ERA++ MP K + W +LL+ G AL
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 395 KFFEEMV 401
+ +V
Sbjct: 431 VAMDHLV 437
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 253/492 (51%), Gaps = 75/492 (15%)
Query: 1 MSRIRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKS-VDFVD 59
MSRI + LLD K ++IHA+L G +++D +V V S ++D
Sbjct: 1 MSRIGKHPAIALLD---SGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLD 57
Query: 60 FGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNG--FLPDSYTFPAMLK 117
+ L + + + + F NS+I ++ S P+ + YR+I+ +G PD+YT +++
Sbjct: 58 YANQILDRSE-KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQ 116
Query: 118 SCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS 177
+C G+Q+HG+ I+ G D +VQ
Sbjct: 117 ACTGLRMRETGLQVHGMTIRRGFDNDPHVQ------------------------------ 146
Query: 178 WTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
T +I+ YA G D +F S+ P+ +++ C R G++ +F
Sbjct: 147 -TGLISLYAELGCLDSCHKVFNSIPC-PDFVCRTAMVTACARCGDV---------VF--- 192
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFR 297
A+++F +P++D ++W ++ISG Q +E+L +F
Sbjct: 193 -----------------------ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
M G++ +GV + SVLSAC +G LD GRW H YI+R IK + + T +VD+YAKCG
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 358 CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
+E+A++ F M KN++TW++ LNGLAM+G G L+ F M +G TPN VTF+++L
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
C G VD+G+++F+ M ++ + P+LEHYGC+ DL RAG L++A+ +++ MPM P
Sbjct: 350 GCSVVGFVDEGQRHFDSM-RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
Query: 478 VLILGALLSACK 489
+ +LL A +
Sbjct: 409 AAVWSSLLHASR 420
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 257/478 (53%), Gaps = 21/478 (4%)
Query: 21 NLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP---- 76
+L K++H +V G + VV ++ + K CG +K P
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVK--------CGDVKSARLLFDRMPRRDI 262
Query: 77 --FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N++IS Y + + + + PD T +++ +C + G IH
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
VI G D+ V NSL +Y R A K+F M +D+VSWT++I+GY L D+A
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 195 VTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ + M+ V+P+ T ++L C G+L G +H L K + +N L++M
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y KC+C+ +A IFH +P+K+++SWTSII+GL R E+L+ R+M + ++P+ + L
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITL 501
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
T+ L+ACA +G L G+ +H ++ R + D + A++DMY +CG + A FN
Sbjct: 502 TAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK- 560
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
K++ +WN LL G + G+G ++ F+ MV P+E+TF+++L C S +V +G Y
Sbjct: 561 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 620
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
F++M + Y ++P L+HY C+ DLL RAG L EA ++ MP+ PD + GALL+AC+
Sbjct: 621 FSKM--EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACR 676
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 190/330 (57%), Gaps = 4/330 (1%)
Query: 75 FPFNSLISSYAGSDRPQIAI-LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
F +N L+ YA A+ L +R + G PD YTFP +L++C + G ++H
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
V++ G D+ V N+L+ +Y C D +SA +FD MP RD++SW ++I+GY G+ E
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 194 AVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
+ +F +M +V+P+ T S++ C G+ R+GR IH + V + N+L
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY+ EA+++F + +KDIVSWT++ISG P +++ +R M ++PD +
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
+ +VLSACA +GDLD G +H+ + + + + +++MY+KC CI++AL F+ +P
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
KN+ +W +++ GL ++ R + AL F +M
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 168/325 (51%), Gaps = 4/325 (1%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
D F A+++ C EG +++ I + + + N+ + ++ + A VF
Sbjct: 93 DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNL 223
+M R++ SW ++ GYA+ G FDEA+ ++ M V+P+ TF +L CG +L
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
G+ +H + + ++ ++ NAL+ MYVKC + A+ +F +P++DI+SW ++ISG
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ E L LF M ++PD + LTSV+SAC +GD GR +H Y+ DI
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ ++ MY G A + F+ M K+I +W +++G + A+ + M +
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 404 GSTPNEVTFLAILTACCHSGLVDKG 428
P+E+T A+L+AC G +D G
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTG 417
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 160/349 (45%), Gaps = 36/349 (10%)
Query: 182 IAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
+ G G +EA+ + SM V + FV+L+ C G +++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+ +E NA + M+V+ L +A +F ++ ++++ SW ++ G + E++ L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 299 M-HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
M G++PD VL C + DL G+ VH ++ R + DI + A++ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 358 CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
++ A F+ MP ++I +WNA+++G +G + L+ F M G P+ +T ++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 418 ACCHSGLVDKGRKYFNQMI--------------SQQY----------NLSPRLEHYGCMT 453
AC G GR +I +Q Y L R+E ++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 454 DLLCRAG-----LLDEALMLVRTM---PMAPDVLILGALLSACKDKGIL 494
+G L D+A+ R M + PD + + A+LSAC G L
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 270/506 (53%), Gaps = 39/506 (7%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
+IH +V G ++ V +V F+ + + F + + V S+ S+I YA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW--TSMICGYAR 212
Query: 87 SDRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
D + A+ + ++VR+ P+S T ++ +CA + G +++ + G+ +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMN 202
+ ++LV +Y C+ A ++FDE ++ ++ + Y R GL EA+ +F +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
V P+ + +S + C + N+ G+ HG + + + NAL+DMY+KC A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 263 QIF-------------------------------HELPKKDIVSWTSIISGLVQCQRPKE 291
+IF +P+K+IVSW +IISGLVQ +E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 292 SLVLFRKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMV 350
++ +F M S G+ DGV + S+ SAC ++G LD +W++ YI++ I+ D+ +GT +V
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 351 DMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEV 410
DM+++CG E A+ FN + +++ W A + +AM G A++ F++M+ +G P+ V
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 411 TFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVR 470
F+ LTAC H GLV +G++ F M+ + + +SP HYGCM DLL RAGLL+EA+ L+
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSML-KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 471 TMPMAPDVLILGALLSACKDKGILKL 496
MPM P+ +I +LL+AC+ +G +++
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEM 657
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 244/498 (48%), Gaps = 46/498 (9%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDF-----VDFGCGFLKQCDW 70
++ C + K H L G+ D V + +S + + F + +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGL---DNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ F +NSLI YA S AIL + +++ +G PD YTFP L +CA G G+Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IHG+++KMG DL+VQNSLVH Y C + SA KVFDEM R+VVSWTS+I GYAR
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 191 FDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+AV +F M V PN+ T V ++ C + +L G +++ I +V+ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
AL+DMY+KC + AK++F E ++ ++ S V+ +E+L +F M SG+ P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKC---------- 356
D + + S +S+C+ + ++ +G+ H Y+ R + +I A++DMY KC
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 357 ---------------------GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALK 395
G ++ A +TF MP KNI +WN +++GL A++
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 396 FFEEMVG-EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
F M EG + VT ++I +AC H G +D + + + L RL + D
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT--TLVD 513
Query: 455 LLCRAGLLDEALMLVRTM 472
+ R G + A+ + ++
Sbjct: 514 MFSRCGDPESAMSIFNSL 531
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 198/428 (46%), Gaps = 59/428 (13%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVD-----FVDFGCGFLKQCDW 70
+ +L++ +K++A + SGI NDL+V +VD + K ++D F ++G L C
Sbjct: 248 KLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-- 305
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
N++ S+Y + A+ + ++ +G PD + + + SC+ I G
Sbjct: 306 -------NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS 358
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG- 189
HG V++ G + N+L+ +Y C +A ++FD M + VV+W SI+AGY G
Sbjct: 359 CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 190 ------------------------------LFDEAVTMFLSMN----VEPNTATFVSLLV 215
LF+EA+ +F SM V + T +S+
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVS 275
CG G L + + I+ I K ++ + L+DM+ +C A IF+ L +D+ +
Sbjct: 479 ACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV-HEYI 334
WT+ I + + ++ LF M G++PDGV L+AC++ G + G+ + + +
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 335 DRRAIK-RDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR--- 389
+ D+H G MVD+ + G +E A+Q +MP + N WN+LL + G
Sbjct: 599 KLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 390 -GYAALKF 396
YAA K
Sbjct: 658 AAYAAEKI 665
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 233/423 (55%), Gaps = 5/423 (1%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
++IS+YA A+ + ++ +G P S + +LKS + G QIH VI+
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIR 212
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
GL + ++ +V++Y C A +VFD+M V+ V+ T ++ GY +AG +A+ +
Sbjct: 213 AGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
Query: 198 FLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F+ + VE ++ F +L C L +G++IH + K + + L+D Y+K
Sbjct: 273 FVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIK 332
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP-DGVILTS 313
C A + F E+ + + VSW++IISG Q + +E++ F+ + S + TS
Sbjct: 333 CSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
+ AC+ + D + G VH +R++ + +A++ MY+KCGC++ A + F M +
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPD 452
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
I W A ++G A +G AL+ FE+MV G PN VTF+A+LTAC H+GLV++G+ +
Sbjct: 453 IVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLD 512
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGI 493
M+ ++YN++P ++HY CM D+ R+GLLDEAL ++ MP PD + LS C
Sbjct: 513 TML-RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKN 571
Query: 494 LKL 496
L+L
Sbjct: 572 LEL 574
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 200/400 (50%), Gaps = 19/400 (4%)
Query: 98 RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVC-DLYVQNSLVHLYGV 156
+++ + G SY++ + ++C + G +H ++MG+ + +QN ++ +Y
Sbjct: 72 QEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCE 130
Query: 157 CDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSL 213
C A K+FDEM + VS T++I+ YA G+ D+AV +F L+ +P ++ + +L
Sbjct: 131 CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTL 190
Query: 214 LVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDI 273
L L GR+IH + + + +++MYVKC L AK++F ++ K
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 274 VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
V+ T ++ G Q R +++L LF + + G+E D + + VL ACA++ +L+ G+ +H
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
+ + ++ ++ +GT +VD Y KC E A + F E+ N +W+A+++G + A
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 394 LKFFEEMVGE-GSTPNEVTFLAILTAC-----CHSGLVDKGRKYFNQMISQQYNLSPRLE 447
+K F+ + + S N T+ +I AC C+ G +I QY S +
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
Y + G LD+A + +M PD++ A +S
Sbjct: 431 MYS-------KCGCLDDANEVFESMD-NPDIVAWTAFISG 462
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 144/276 (52%), Gaps = 11/276 (3%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C +L+ K+IHA + G+ V +VDF+ K F + C ++
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF-ESACRAFQEIR-EP 349
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQI-VRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+ ++++IS Y + + A+ ++ + +N + +S+T+ ++ ++C++ G Q+
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H IK L+ Y +++L+ +Y C A +VF+ M D+V+WT+ I+G+A G
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 192 DEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRR-IHGLIFKRASKVSLEASNA 247
EA+ +F +S ++PN+ TF+++L C +G + G+ + ++ K +++ +
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 248 LMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISG 282
++D+Y + L EA + +P + D +SW +SG
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 66/154 (42%)
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
L + ++ E+ ++M +G+ + AC + L +GR +H+ +
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPS 117
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
+ + ++ MY +C +E A + F+EM N + +++ A G A+ F M+
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
G P + +L + + +D GR+ +I
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVI 211
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 224/410 (54%), Gaps = 38/410 (9%)
Query: 130 QIHGIVIKMGLVCDLYVQNS-LVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
QIH +IK GL+ D + L D A VF + ++ W +II G++R+
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 189 GLFDEAVTMFLSM-----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ A+++F+ M +V+P T+ S+ GR G R GR++HG++ K +
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 244 ASNALMDMYVKCECLSEA-------------------------------KQIFHELPKKD 272
N ++ MYV C CL EA + +F E+P+++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
VSW S+ISG V+ R K++L +FR+M ++PDG + S+L+ACA +G + GRW+HE
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYA 392
YI R + + + TA++DMY KCGCIE L F P K + WN+++ GLA +G
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342
Query: 393 ALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCM 452
A+ F E+ G P+ V+F+ +LTAC HSG V + ++F +++ ++Y + P ++HY M
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLM 401
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
++L AGLL+EA L++ MP+ D +I +LLSAC+ G +++ R +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 53/411 (12%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPF 77
+C+ ++ K+IHA L+ +G++ + + RV+ F S +++ + + + + F +
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK-NPFVW 92
Query: 78 NSLISSYAGSDRPQIAI------LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
N++I ++ S P++AI LC V+ P T+P++ K+ +G Q+
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVK----PQRLTYPSVFKAYGRLGQARDGRQL 148
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCD----------------------------DC--- 160
HG+VIK GL D +++N+++H+Y C C
Sbjct: 149 HGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLI 208
Query: 161 RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGC 217
A +FDEMP R+ VSW S+I+G+ R G F +A+ MF M +V+P+ T VSLL C
Sbjct: 209 DQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
G GR IH I + +++ AL+DMY KC C+ E +F PKK + W
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWN 328
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL----DYGRWVHEY 333
S+I GL + ++ LF ++ SG+EPD V VL+ACA+ G++ ++ R + E
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE- 387
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNIFTWNALLNG 383
+ I+ I T MV++ G +E A MP ++ W++LL+
Sbjct: 388 --KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 239/491 (48%), Gaps = 73/491 (14%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG-MQIHGIV 135
+N++I+ ++ ++ AI + ++ GF PD++TF ++L A+ + +Q H
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDC----RSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
+K G V N+LV +Y C SA KVFDE+ +D SWT+++ GY + G F
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 192 D-----------------------------------EAVTMFLSMNVEPNTATFVSLLVG 216
D E V +S +E + T+ S++
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
C +G L++G+++H + +R S N+L+ +Y KC EA+ IF ++P KD+VSW
Sbjct: 296 CATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSW 354
Query: 277 TSIISGLVQCQRPKESLVLFRKMHS-------------------------------SGIE 305
+++SG V E+ ++F++M G E
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
P + + +CA +G G+ H + + + G A++ MYAKCG +E A Q
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F MPC + +WNAL+ L HG G A+ +EEM+ +G P+ +T L +LTAC H+GLV
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
D+GRKYF+ M Y + P +HY + DLLCR+G +A ++ ++P P I ALL
Sbjct: 535 DQGRKYFDSM-ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALL 593
Query: 486 SACKDKGILKL 496
S C+ G ++L
Sbjct: 594 SGCRVHGNMEL 604
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 169/371 (45%), Gaps = 43/371 (11%)
Query: 57 FVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAML 116
+ D G L+ D + +N++IS Y Q A+ R++V +G D +T+P+++
Sbjct: 234 YFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
++CA + G Q+H V++ + NSLV LY C A +F++MP +D+V
Sbjct: 294 RACATAGLLQLGKQVHAYVLRREDF-SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSMN---------------------------------- 202
SW ++++GY +G EA +F M
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
EP F + C G G++ H + K SL A NAL+ MY KC + EA+
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEAR 472
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
Q+F +P D VSW ++I+ L Q E++ ++ +M GI PD + L +VL+AC++ G
Sbjct: 473 QVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAG 532
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIG----TAMVDMYAKCGCIERALQTFNEMPCK-NIFTW 377
+D GR +Y D I G ++D+ + G A +P K W
Sbjct: 533 LVDQGR---KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 378 NALLNGLAMHG 388
ALL+G +HG
Sbjct: 590 EALLSGCRVHG 600
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 181/423 (42%), Gaps = 77/423 (18%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPV--RDVVSWTSIIAGYARAGLFDEAVTMFLS 200
D + ++V Y D A VF++ PV RD V + ++I G++ A+ +F
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 201 MNVE---PNTATFVSLLVGCGR-SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC- 255
M E P+ TF S+L G + + + + H K + SNAL+ +Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 256 ---ECLSEAKQIFHELPKKDIVSWTSI--------------------------------I 280
L A+++F E+ +KD SWT++ I
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
SG V +E+L + R+M SSGIE D SV+ ACA G L G+ VH Y+ RR
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-D 317
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL------------------- 381
H ++V +Y KCG + A F +MP K++ +WNALL
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 382 ------------NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
+GLA +G G LK F M EG P + F + +C G G+
Sbjct: 378 KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+Y Q++ ++ S L + + + G+++EA + RTMP D + AL++A
Sbjct: 438 QYHAQLLKIGFDSS--LSAGNALITMYAKCGVVEEARQVFRTMP-CLDSVSWNALIAALG 494
Query: 490 DKG 492
G
Sbjct: 495 QHG 497
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 261/488 (53%), Gaps = 6/488 (1%)
Query: 5 RLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF 64
+ L+ ++ ++ R+ + +K+H+ + S + R+ ++ F+ + D +
Sbjct: 4 QTQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLIS--ARK 61
Query: 65 LKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG 124
L S F +NS+I +YA + + + + QI+R+ PD++T+ + + +
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFD 121
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAG 184
IHGI I GL D +++V Y A K+F +P D+ W +I G
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 185 YARAGLFDEAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
Y G +D+ + +F M +PN T V+L G L + +H K
Sbjct: 182 YGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
AL++MY +C C++ A +F+ + + D+V+ +S+I+G +C KE+L LF ++
Sbjct: 242 SYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRM 301
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
SG +PD V++ VL +CA + D G+ VH Y+ R ++ DI + +A++DMY+KCG ++
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 362 ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
A+ F +P KNI ++N+L+ GL +HG A + F E++ G P+E+TF A+L CCH
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCH 421
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
SGL++KG++ F +M S ++ + P+ EHY M L+ AG L+EA V ++ D IL
Sbjct: 422 SGLLNKGQEIFERMKS-EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGIL 480
Query: 482 GALLSACK 489
GALLS C+
Sbjct: 481 GALLSCCE 488
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 247/484 (51%), Gaps = 18/484 (3%)
Query: 26 KKIHAQLV----TSGIVRNDLVVKRVVDFFGKS-VDFVDFGCGFLKQCDWRVSSFPFNSL 80
K++HAQ++ +S ++ + ++ V F S V +G W +S+
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISW-------SSI 240
Query: 81 ISSYAGSDRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
I+ ++ A+ ++++ G F P+ Y F + LK+C+ L G QIHG+ IK
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
L + SL +Y C SA +VFD++ D SW IIAG A G DEAV++F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 200 SMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M P+ + SLL + L G +IH I K L N+L+ MY C
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 257 CLSEAKQIFHELPKK-DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
L +F + D VSW +I++ +Q ++P E L LF+ M S EPD + + ++L
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
C + L G VH Y + + + I ++DMYAKCG + +A + F+ M +++
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVV 540
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+W+ L+ G A G G AL F+EM G PN VTF+ +LTAC H GLV++G K + M
Sbjct: 541 SWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILK 495
++ +SP EH C+ DLL RAG L+EA + M + PDV++ LLSACK +G +
Sbjct: 601 -QTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 496 LPTR 499
L +
Sbjct: 660 LAQK 663
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 245/542 (45%), Gaps = 63/542 (11%)
Query: 3 RIRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGC 62
+IRL L+ +L +KIH ++ S + ++ ++ +GK C
Sbjct: 64 KIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGK--------C 115
Query: 63 GFLKQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAML 116
G L+ P + S+I+ Y+ + + AI Y ++++ +PD + F +++
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
K+CA +G G Q+H VIK+ L QN+L+ +Y + A +VF +P++D++
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 177 SWTSIIAGYARAGLFDEAVTMF---LSMNV-EPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
SW+SIIAG+++ G EA++ LS V PN F S L C G +IHGL
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
K + A +L DMY +C L+ A+++F ++ + D SW II+GL E+
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
+ +F +M SSG PD + L S+L A L G +H YI + D+ + +++ M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 353 YAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
Y C + F + + +WN +L H + L+ F+ M+ P+ +T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 412 FLAILTAC-------------CHS-------------GLVD---------KGRKYFNQMI 436
+L C C+S GL+D + R+ F+ M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSACKDKGI 493
++ + + + ++G +EAL+L + M A P+ + +L+AC G+
Sbjct: 536 NRD------VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 494 LK 495
++
Sbjct: 590 VE 591
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR--VSSFPFNSLISSY 84
+IH+ ++ G + + V ++ + D C F D+R S +N+++++
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY---CCFNLFEDFRNNADSVSWNTILTAC 448
Query: 85 AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDL 144
++P + ++ ++ + PD T +L+ C + G Q+H +K GL +
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-- 202
+++N L+ +Y C A ++FD M RDVVSW+++I GYA++G +EA+ +F M
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 203 -VEPNTATFVSLLVGCGRSGNLRMGRRIHGLI-FKRASKVSLEASNALMDMYVKCECLSE 260
+EPN TFV +L C G + G +++ + + + E + ++D+ + L+E
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A++ E+ +EPD V+ ++LSAC
Sbjct: 629 AERFIDEMK----------------------------------LEPDVVVWKTLLSACKT 654
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMV---DMYAKCGCIERA 362
G++ + E I +K D TA V M+A G E A
Sbjct: 655 QGNVHLAQKAAENI----LKIDPFNSTAHVLLCSMHASSGNWENA 695
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/482 (32%), Positives = 248/482 (51%), Gaps = 44/482 (9%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
+ I C + S + +HAQ++ G++ + + + V + D+ + + R
Sbjct: 32 FISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVS--CSSLLKSPDYSLSIFRNSEER 89
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+ F N+LI + R + ++ + ++R G PD TFP +LKS + G +
Sbjct: 90 -NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYAR 187
H +K + CD +V+ SLV +Y + A +VF+E P R ++ W +I GY R
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 188 AGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
A A T+F SM E N+ ++ +L+ G
Sbjct: 209 AKDMHMATTLFRSM-PERNSGSWSTLIKG------------------------------- 236
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
YV L+ AKQ+F +P+K++VSWT++I+G Q + ++ + +M G++P+
Sbjct: 237 ----YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ +VLSAC+ G L G +H YI IK D IGTA+VDMYAKCG ++ A F+
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
M K+I +W A++ G A+HGR + A++ F +M+ G P+EV FLA+LTAC +S VD
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G +F+ M Y + P L+HY + DLL RAG L+EA LV MP+ PD+ AL A
Sbjct: 413 GLNFFDSM-RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 488 CK 489
CK
Sbjct: 472 CK 473
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 29/304 (9%)
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
P+ + F+SL+ C + +LR +H I +R S A+ V C L ++
Sbjct: 24 QASPDESHFISLIHACKDTASLR---HVHAQILRRGVLSSRVAAQ-----LVSCSSLLKS 75
Query: 262 K----QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
IF +++ ++I GL + R + S+ F M G++PD + VL +
Sbjct: 76 PDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS 135
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----N 373
+ +G GR +H + + D + ++VDMYAK G ++ A Q F E P + +
Sbjct: 136 NSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
I WN L+NG + A F M N ++ ++ SG +++ ++ F
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSM----PERNSGSWSTLIKGYVDSGELNRAKQLFE 251
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKD 490
M + + + + + + G + A+ M + P+ + A+LSAC
Sbjct: 252 LMPEKN------VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 491 KGIL 494
G L
Sbjct: 306 SGAL 309
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 265/476 (55%), Gaps = 18/476 (3%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLI 81
L+ + +H Q+ ++ + ++ + K D + F K + ++ + ++I
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA--KKNAVSWTAMI 275
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
SSY + + A+ + +++++G P+ T ++L SC + I EG +HG ++ L
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 142 CDL-YVQNSLVHLYGVC---DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
+ + +LV LY C DC + +V + R++V+W S+I+ YA G+ +A+ +
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGL 392
Query: 198 FLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE-ASNALMDMYV 253
F M ++P+ T S + C +G + +G++IHG + + + VS E N+L+DMY
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR--TDVSDEFVQNSLIDMYS 450
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
K + A +F+++ + +V+W S++ G Q E++ LF M+ S +E + V +
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA 510
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
V+ AC+++G L+ G+WVH + +K D+ TA++DMYAKCG + A F M ++
Sbjct: 511 VIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
I +W++++N MHGR +A+ F +MV G+ PNEV F+ +L+AC HSG V++G+ YFN
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN 629
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
M + + +SP EH+ C DLL R+G L EA ++ MP D + G+L++ C+
Sbjct: 630 LM--KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 243/460 (52%), Gaps = 21/460 (4%)
Query: 17 RRCNNLKSFKKIHAQLVTSGIVRND-LVVKRVVD--FFGKSVDFVDFGCGFLKQCDWRVS 73
R C++L+ ++HA L+ +G +R D L V ++++ F S D D
Sbjct: 9 RSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD---- 64
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGE----GM 129
SF + LI AI Y ++V + FP++L++CA G E G
Sbjct: 65 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA---GSREHLSVGG 121
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
++HG +IK G+ D ++ SL+ +YG + A KVFD MPVRD+V+W+++++ G
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+A+ MF M VEP+ T +S++ GC G LR+ R +HG I ++ + N
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+ MY KC L +++IF ++ KK+ VSWT++IS + + +++L F +M SGIEP
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEP 301
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH-IGTAMVDMYAKCGCIERALQT 365
+ V L SVLS+C +G + G+ VH + RR + + + A+V++YA+CG +
Sbjct: 302 NLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
+ +NI WN+L++ A G AL F +MV + P+ T + ++AC ++GLV
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
G++ +I + ++S + D+ ++G +D A
Sbjct: 422 PLGKQIHGHVI--RTDVSDEFVQ-NSLIDMYSKSGSVDSA 458
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 244/478 (51%), Gaps = 26/478 (5%)
Query: 9 KWVLLDYIRRC----NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF 64
K+V +R C +L K+H +++ G+ + ++ ++ +G++ G
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQT--------GN 151
Query: 65 LKQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKS 118
L + P +++L+SS + A+ ++ +V +G PD+ T ++++
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 119 CAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSW 178
CA + +HG + + D + NSL+ +Y C D S+ ++F+++ ++ VSW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 179 TSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFK 235
T++I+ Y R ++A+ F M +EPN T S+L CG G +R G+ +HG +
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 236 RASKVSLEA-SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
R + E+ S AL+++Y +C LS+ + + + ++IV+W S+IS ++L
Sbjct: 332 RELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALG 391
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA 354
LFR+M + I+PD L S +SAC N G + G+ +H ++ R + D + +++DMY+
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYS 450
Query: 355 KCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
K G ++ A FN++ +++ TWN++L G + +G A+ F+ M NEVTFLA
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA 510
Query: 415 ILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
++ AC G ++KG+ +++I L + D+ + G L+ A + R M
Sbjct: 511 VIQACSSIGSLEKGKWVHHKLIISGLK---DLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 186/407 (45%), Gaps = 42/407 (10%)
Query: 130 QIHGIVIKMG-LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
Q+H ++ G L D L+ Y S+ VF+ P D + +I
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 189 GLFDEAVTMF---LSMNVEPNTATFVSLLVGC-GRSGNLRMGRRIHGLIFKRASKVSLEA 244
L D A+ ++ +S + + F S+L C G +L +G ++HG I K
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
+L+ MY + LS+A+++F +P +D+V+W++++S ++ ++L +F+ M G+
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
EPD V + SV+ CA +G L R VH I R+ D + +++ MY+KCG + + +
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 365 TFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGL 424
F ++ KN +W A+++ AL+ F EM+ G PN VT ++L++C GL
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 425 VDKGRKYFNQMISQQYNLSPRLEH--------------------------------YGCM 452
+ +G+ + ++ L P E + +
Sbjct: 319 IREGKSVHGFAVRRE--LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSL 376
Query: 453 TDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILKL 496
L G++ +AL L R M + PD L + +SAC++ G++ L
Sbjct: 377 ISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 267/515 (51%), Gaps = 52/515 (10%)
Query: 19 CNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD--FVDFG-CGFLKQCDWRVSSF 75
C +IH +L+ +GI++N + R+V F S DF C F ++ V SF
Sbjct: 15 CKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF---HEYHVCSF 71
Query: 76 PF---------NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG 126
F N++I S++ P+ A+L ++ NG D ++ +LK+C+ +
Sbjct: 72 SFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVK 131
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
GMQIHG + K GL DL++QN L+ LY C + ++FD MP RD VS+ S+I GY
Sbjct: 132 GGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 191
Query: 187 RAGLFDEAVTMFLSMNVE-PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
+ GL A +F M +E N ++ S++ G ++ + G I +F + L +
Sbjct: 192 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD---GVDIASKLFADMPEKDLISW 248
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII------------------------- 280
N+++D YVK + +AK +F +P++D+V+W ++I
Sbjct: 249 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 308
Query: 281 ------SGLVQCQRPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
+G VQ + E+L +F M S + PD L VL A A +G L +H Y
Sbjct: 309 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 368
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
I + +G A++DMY+KCG I+ A+ F + K+I WNA++ GLA+HG G +A
Sbjct: 369 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 428
Query: 394 LKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMT 453
++ P+++TF+ +L AC HSGLV +G F +++ +++ + PRL+HYGCM
Sbjct: 429 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF-ELMRRKHKIEPRLQHYGCMV 487
Query: 454 DLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
D+L R+G ++ A L+ MP+ P+ +I L+AC
Sbjct: 488 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTAC 522
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 183/447 (40%), Gaps = 89/447 (19%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLV-------------------HLYGVCDDCRSAGKVFDEM 170
QIHG +IK G++ + + +V H Y VC F
Sbjct: 23 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS--------FSFG 74
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGR 227
V D W ++I ++ +A+ + M V + + +L C R G ++ G
Sbjct: 75 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 134
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQ 287
+IHG + K L N L+ +Y+KC CL ++Q+F +PK+D VS+ S+I G V+C
Sbjct: 135 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 194
Query: 288 -----------RPKE--SLVLFRKMHSSGIE-PDGVILTSVLSACANVGDL-DYGRWVHE 332
P E +L+ + M S + DGV + S L A DL + +
Sbjct: 195 LIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDG 254
Query: 333 YIDRRAI-----------KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
Y+ I +RD+ M+D YAK G + A F++MP +++ +N+++
Sbjct: 255 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 314
Query: 382 NGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
G + AL+ F +M E P++ T + +L A G + K ++ +Q+
Sbjct: 315 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 374
Query: 441 NLSPRL-----------------------------EHYGCMTDLLCRAGLLDEA---LML 468
L +L +H+ M L GL + A L+
Sbjct: 375 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 434
Query: 469 VRTMPMAPDVLILGALLSACKDKGILK 495
+ + + PD + +L+AC G++K
Sbjct: 435 IERLSLKPDDITFVGVLNACSHSGLVK 461
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 256/505 (50%), Gaps = 46/505 (9%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++HA ++SG+ + ++V ++V F+ + + +D + + + P+N LI SY
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYS-AFNLLDEAQTITENSEI-LHPLPWNVLIGSYI 160
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ R Q ++ Y++++ G D +T+P+++K+CA L G +HG + C+LY
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT----MFLSM 201
V N+L+ +Y A ++FD M RD VSW +II Y EA M+LS
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS- 279
Query: 202 NVEPNTATFVSLLVGCGRSGN-----------------------------------LRMG 226
VE + T+ ++ GC +GN L+ G
Sbjct: 280 GVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 227 RRIHGLIFKRASKVSL--EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
+ H L+ + S N+L+ MY +C L A +F ++ + +W SIISG
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD-I 343
+R +E+ L ++M SG P+ + L S+L A VG+L +G+ H YI RR +D +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ ++VDMYAK G I A + F+ M ++ T+ +L++G G+G AL +F++M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G P+ VT +A+L+AC HS LV +G F +M + + RLEHY CM DL CRAG LD
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 464 EALMLVRTMPMAPDVLILGALLSAC 488
+A + T+P P + LL AC
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKAC 603
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 186/436 (42%), Gaps = 59/436 (13%)
Query: 62 CGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDS------------ 109
C F+ Q W+ P + ++ PQ+ +R + +G L ++
Sbjct: 19 CKFIPQ-SWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSG 77
Query: 110 ------YTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
Y+ ++L +C F G Q+H I GL D + LV Y + A
Sbjct: 78 SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEA 137
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRS 220
+ + + + W +I Y R F E+V+++ +S + + T+ S++ C
Sbjct: 138 QTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL 197
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
+ GR +HG I + + +L NAL+ MY + + A+++F + ++D VSW +II
Sbjct: 198 LDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII 257
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV-------------------------- 314
+ ++ E+ L +M+ SG+E V ++
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 315 ---------LSACANVGDLDYGRWVHEYIDRR-AIKRDI-HIGTAMVDMYAKCGCIERAL 363
L AC+++G L +G+ H + R + DI ++ +++ MY++C + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
F ++ ++ TWN++++G A + R +EM+ G PN +T +IL G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 424 LVDKGRKYFNQMISQQ 439
+ G+++ ++ +Q
Sbjct: 438 NLQHGKEFHCYILRRQ 453
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 256/505 (50%), Gaps = 46/505 (9%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++HA ++SG+ + ++V ++V F+ + + +D + + + P+N LI SY
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYS-AFNLLDEAQTITENSEI-LHPLPWNVLIGSYI 160
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ R Q ++ Y++++ G D +T+P+++K+CA L G +HG + C+LY
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT----MFLSM 201
V N+L+ +Y A ++FD M RD VSW +II Y EA M+LS
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS- 279
Query: 202 NVEPNTATFVSLLVGCGRSGN-----------------------------------LRMG 226
VE + T+ ++ GC +GN L+ G
Sbjct: 280 GVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 227 RRIHGLIFKRASKVSL--EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
+ H L+ + S N+L+ MY +C L A +F ++ + +W SIISG
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD-I 343
+R +E+ L ++M SG P+ + L S+L A VG+L +G+ H YI RR +D +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ ++VDMYAK G I A + F+ M ++ T+ +L++G G+G AL +F++M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G P+ VT +A+L+AC HS LV +G F +M + + RLEHY CM DL CRAG LD
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 464 EALMLVRTMPMAPDVLILGALLSAC 488
+A + T+P P + LL AC
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKAC 603
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 186/436 (42%), Gaps = 59/436 (13%)
Query: 62 CGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDS------------ 109
C F+ Q W+ P + ++ PQ+ +R + +G L ++
Sbjct: 19 CKFIPQ-SWKQLPRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSG 77
Query: 110 ------YTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
Y+ ++L +C F G Q+H I GL D + LV Y + A
Sbjct: 78 SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEA 137
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRS 220
+ + + + W +I Y R F E+V+++ +S + + T+ S++ C
Sbjct: 138 QTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL 197
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
+ GR +HG I + + +L NAL+ MY + + A+++F + ++D VSW +II
Sbjct: 198 LDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAII 257
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV-------------------------- 314
+ ++ E+ L +M+ SG+E V ++
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 315 ---------LSACANVGDLDYGRWVHEYIDRR-AIKRDI-HIGTAMVDMYAKCGCIERAL 363
L AC+++G L +G+ H + R + DI ++ +++ MY++C + A
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
F ++ ++ TWN++++G A + R +EM+ G PN +T +IL G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 424 LVDKGRKYFNQMISQQ 439
+ G+++ ++ +Q
Sbjct: 438 NLQHGKEFHCYILRRQ 453
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 232/432 (53%), Gaps = 5/432 (1%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
S +N++I Y + + ++ + + + + F PD T ++L++C + I+
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYN 331
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
++K G V + V+N L+ +Y C D +A VF+ M +D VSW SII+GY ++G E
Sbjct: 332 YMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME 391
Query: 194 AVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A+ +F + M + + T++ L+ R +L+ G+ +H K + L SNAL+D
Sbjct: 392 AMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALID 451
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY KC + ++ +IF + D V+W ++IS V+ L + +M S + PD
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
L CA++ G+ +H + R + ++ IG A+++MY+KCGC+E + + F M
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+++ TW ++ M+G G AL+ F +M G P+ V F+AI+ AC HSGLVD+G
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKD 490
F +M Y + P +EHY C+ DLL R+ + +A ++ MP+ PD I ++L AC+
Sbjct: 632 CFEKM-KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRT 690
Query: 491 KGILKLPTRYTR 502
G ++ R +R
Sbjct: 691 SGDMETAERVSR 702
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 248/472 (52%), Gaps = 8/472 (1%)
Query: 20 NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNS 79
+NL ++IHA +++ G+ +D +++D + + ++ + + +NS
Sbjct: 18 SNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS-SLSVFRRVSPAKNVYLWNS 76
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
+I +++ + A+ Y ++ + PD YTFP+++K+CA G ++ ++ MG
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
DL+V N+LV +Y A +VFDEMPVRD+VSW S+I+GY+ G ++EA+ ++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 200 SMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
+ + P++ T S+L G ++ G+ +HG K + +N L+ MY+K
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
++A+++F E+ +D VS+ ++I G ++ + +ES+ +F + + +PD + ++SVL
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLR 315
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT 376
AC ++ DL ++++ Y+ + + + ++D+YAKCG + A FN M CK+ +
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
WN++++G G A+K F+ M+ + +T+L +++ + G+ + I
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+ + L + D+ + G + ++L + +M D + ++SAC
Sbjct: 436 --KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISAC 484
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 166/340 (48%), Gaps = 17/340 (5%)
Query: 113 PAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM-P 171
P + ++ + + E +IH +VI +GL + L+ Y + S+ VF + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRR 228
++V W SII +++ GLF EA+ + + V P+ TF S++ C + MG
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR 288
++ I + L NAL+DMY + L+ A+Q+F E+P +D+VSW S+ISG
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+E+L ++ ++ +S I PD ++SVL A N+ + G+ +H + + + + +
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG------ 402
+V MY K A + F+EM ++ ++N ++ GY L+ EE V
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC-------GYLKLEMVEESVRMFLENL 300
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
+ P+ +T ++L AC H + + +N M+ + L
Sbjct: 301 DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 143/342 (41%), Gaps = 60/342 (17%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD-------FVDFGCG 63
+L+ R +LK K +H+ + SGI + V ++D + K + F G G
Sbjct: 413 MLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
+ +N++IS+ + Q+ ++ +PD TF L CA
Sbjct: 473 ---------DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
G +IH +++ G +L + N+L+ +Y C ++ +VF+ M RDVV+WT +I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 184 GYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
Y G ++A+ F M + P++ F++++ C SG + G + K K+
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKI 642
Query: 241 S--LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+E ++D+ + + +S+A++ +P
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMP----------------------------- 673
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
I+PD I SVL AC GD++ E + RR I+
Sbjct: 674 -----IKPDASIWASVLRACRTSGDMETA----ERVSRRIIE 706
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 262/518 (50%), Gaps = 53/518 (10%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
++HA++V I ++ + +++ F+ + F + R ++F +N+L+ +Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQ-ALHVFDEITVR-NAFSYNALLIAYTS 100
Query: 87 SDR---------PQIAILCYRQIVRNGFLPDSYTFPAMLKS---CAMFLGIGEGMQIHGI 134
+ I CY + PDS + +LK+ C F Q+HG
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSS---DAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
VI+ G D++V N ++ Y CD+ SA KVFDEM RDVVSW S+I+GY+++G F++
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 195 VTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
M+ +M + +PN T +S+ CG+S +L G +H + + ++ L NA++
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 251 MYVKCECLSEAKQIFHELPKKDIVS-------------------------------WTSI 279
Y KC L A+ +F E+ +KD V+ W ++
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ISGL+Q +E + FR+M G P+ V L+S+L + +L G+ +H + R
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+I++ T+++D YAK G + A + F+ +++ W A++ A+HG +A F++
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M G+ P++VT A+L+A HSG D + F+ M++ +Y++ P +EHY CM +L RA
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT-KYDIEPGVEHYACMVSVLSRA 516
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLP 497
G L +A+ + MP+ P + GALL+ G L++
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIA 554
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 165/346 (47%), Gaps = 44/346 (12%)
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
+Q+H ++ + D ++ + L+ Y D R A VFDE+ VR+ S+ +++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 189 GLFDEAVTMFLSM---------NVEPNTATF---VSLLVGCGRSGNLRMGRRIHGLIFKR 236
++ +A ++FLS P++ + + L GC + R++HG + +
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 237 ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF 296
+ N ++ Y KC+ + A+++F E+ ++D+VSW S+ISG Q ++ ++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 297 RKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
+ M + S +P+GV + SV AC DL +G VH+ + I+ D+ + A++ YAK
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 356 CGCIERALQTFNEMPCKN-------------------------------IFTWNALLNGL 384
CG ++ A F+EM K+ + TWNA+++GL
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+ + F EM+ GS PN VT ++L + +S + G++
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE 387
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 234/422 (55%), Gaps = 7/422 (1%)
Query: 76 PFNSLISSYAG-SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N++IS YA + +I L YR + +G PD TF A L + G +H
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYR-MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
++K G D++++ +L+ +Y C ++ +V + +P +DVV WT +I+G R G ++A
Sbjct: 271 IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
Query: 195 VTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ +F M + ++ S++ C + G+ +G +HG + + + A N+L+ M
Sbjct: 331 LIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP-DGVI 310
Y KC L ++ IF + ++D+VSW +IISG Q ++L+LF +M ++ D
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
+ S+L AC++ G L G+ +H + R I+ + TA+VDMY+KCG +E A + F+ +
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
K++ +W L+ G HG+G AL+ + E + G PN V FLA+L++C H+G+V +G K
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKD 490
F+ M+ + + + P EH C+ DLLCRA +++A + P + +LG +L AC+
Sbjct: 571 IFSSMV-RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRA 629
Query: 491 KG 492
G
Sbjct: 630 NG 631
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 10/400 (2%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FNS I+ + + + + ++ N LPD++TFP++LK+CA + G+ IH V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
G D Y+ +SLV+LY A KVF+EM RDVV WT++I Y+RAG+ EA +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+ M ++P T + +L G L+ +H + N+++++Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
KC+ + +AK +F ++ ++D+VSW ++ISG E L L +M G+ PD +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
LS + DL+ GR +H I + D+H+ TA++ MY KCG E + + +P K+
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
+ W +++GL GR AL F EM+ GS + +++ +C G D G
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 434 QMISQQYNL-SPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
++ Y L +P L + + + G LD++L++ M
Sbjct: 371 YVLRHGYTLDTPALN---SLITMYAKCGHLDKSLVIFERM 407
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 174/331 (52%), Gaps = 7/331 (2%)
Query: 103 NGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS 162
G P T ML L I + +H + G CD+ V NS+++LY CD
Sbjct: 141 QGIKPGPVTLLEMLSGV---LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
A +FD+M RD+VSW ++I+GYA G E + + M + P+ TF + L G
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
+L MGR +H I K V + AL+ MY+KC + ++ +P KD+V WT +
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ISGL++ R +++L++F +M SG + + SV+++CA +G D G VH Y+ R
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
D +++ MYAKCG ++++L F M +++ +WNA+++G A + AL FEE
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 400 MVGEG-STPNEVTFLAILTACCHSGLVDKGR 429
M + + T +++L AC +G + G+
Sbjct: 438 MKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 234/432 (54%), Gaps = 24/432 (5%)
Query: 76 PFNSLISSYAGSDR----PQIAILCYRQ-----------IVRNGFLPDSYTFPAMLKSCA 120
P +L SY+ +D+ + LCY++ + +G DS T+ ++K C
Sbjct: 13 PVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCI 72
Query: 121 MFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTS 180
+ EG I + G +++ N L+++Y + A ++FD+MP R+V+SWT+
Sbjct: 73 SNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTT 132
Query: 181 IIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
+I+ Y++ + +A+ + + M NV PN T+ S+L C ++RM +H I K
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFR 297
+ + +AL+D++ K +A +F E+ D + W SII G Q R +L LF+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
+M +G + LTSVL AC + L+ G H +I + +D+ + A+VDMY KCG
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCG 307
Query: 358 CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
+E AL+ FN+M +++ TW+ +++GLA +G ALK FE M G+ PN +T + +L
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
AC H+GL++ G YF M + Y + P EHYGCM DLL +AG LD+A+ L+ M PD
Sbjct: 368 ACSHAGLLEDGWYYFRSM-KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 478 VLILGALLSACK 489
+ LL AC+
Sbjct: 427 AVTWRTLLGACR 438
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 165/341 (48%), Gaps = 28/341 (8%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVS-- 73
+R CN + + +H ++ G+ + V ++D F K + D F D V+
Sbjct: 169 LRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVF----DEMVTGD 224
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +NS+I +A + R +A+ ++++ R GF+ + T ++L++C + GMQ H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
++K DL + N+LV +Y C A +VF++M RDV++W+++I+G A+ G E
Sbjct: 285 HIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMG-------RRIHGLIFKRASKVSLE 243
A+ +F M +PN T V +L C +G L G ++++G+ R E
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR------E 396
Query: 244 ASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
++D+ K L +A ++ +E+ + D V+W +++ G + QR L +
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQR-NMVLAEYAAKKVI 454
Query: 303 GIEPDGVILTSVLSAC-ANVGDLDYGRWVHEYIDRRAIKRD 342
++P+ ++LS AN D + + R IK++
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 214/403 (53%), Gaps = 44/403 (10%)
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS------AGKVFDEMPVRDVVSWTS 180
E QIH ++K GL+ D Y ++ C S A VFD D W
Sbjct: 29 ELKQIHARMLKTGLMQDSY---AITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNL 85
Query: 181 IIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
+I G++ + + ++ ++ M + N TF SLL C +IH I K
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 238 SKVSLEASNALMDMY-------------------------------VKCECLSEAKQIFH 266
+ + A N+L++ Y VK + A +F
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 267 ELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
++ +K+ +SWT++ISG VQ KE+L LF +M +S +EPD V L + LSACA +G L+
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 327 GRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAM 386
G+W+H Y+++ I+ D +G ++DMYAKCG +E AL+ F + K++ W AL++G A
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 387 HGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRL 446
HG G A+ F EM G PN +TF A+LTAC ++GLV++G+ F M + YNL P +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM-ERDYNLKPTI 384
Query: 447 EHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
EHYGC+ DLL RAGLLDEA ++ MP+ P+ +I GALL AC+
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 209/410 (50%), Gaps = 39/410 (9%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDF--FGKSVDFVDFGCGFLKQCDWRVS 73
++RC+ + K+IHA+++ +G++++ + + + F S DF+ + D R
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD-RPD 79
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+F +N +I ++ SD P+ ++L Y++++ + ++YTFP++LK+C+ E QIH
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+ K+G D+Y NSL++ Y V + + A +FD +P D VSW S+I GY +AG D
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 194 AVTMFLSM----------------------------------NVEPNTATFVSLLVGCGR 219
A+T+F M +VEP+ + + L C +
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
G L G+ IH + K ++ L+DMY KC + EA ++F + KK + +WT++
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR-A 338
ISG +E++ F +M GI+P+ + T+VL+AC+ G ++ G+ + ++R
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 339 IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMH 387
+K I +VD+ + G ++ A + EMP K N W ALL +H
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 207/356 (58%), Gaps = 6/356 (1%)
Query: 141 VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLS 200
V D+ N+++ Y A ++FDE PV+DV +WT++++GY + + +EA +F
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 201 MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
M E N ++ ++L G + + M + + ++ R ++ N ++ Y +C +SE
Sbjct: 307 M-PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISE 361
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
AK +F ++PK+D VSW ++I+G Q E+L LF +M G + +S LS CA+
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
V L+ G+ +H + + + +G A++ MY KCG IE A F EM K+I +WN +
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
+ G + HG G AL+FFE M EG P++ T +A+L+AC H+GLVDKGR+YF M +Q Y
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM-TQDY 540
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ P +HY CM DLL RAGLL++A L++ MP PD I G LL A + G +L
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 203/471 (43%), Gaps = 71/471 (15%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R SS +N +IS Y + ++A + ++ D ++ M+K +G+ +
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARE 147
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+ I+ + VC S G DD RS VFD MP ++ VSW ++++ Y +
Sbjct: 148 LFEIMPERD-VCSWNTMLSGYAQNGCVDDARS---VFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 191 FDEAVTMFLSMNVEPNTA--TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+EA +F S N A ++ LL G + + R+ F + + + N +
Sbjct: 204 MEEACMLFKS---RENWALVSWNCLLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTI 256
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ Y + + EA+Q+F E P +D+ +WT+++SG +Q + +E+ LF KM E +
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNE 312
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
V ++L+ ++ + + + + R++ M+ YA+CG I A F++
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
MP ++ +W A++ G + G + AL+ F +M EG N +F + L+ C ++ G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTD-----LLCRAGLLDEALMLVRTMP---------- 473
++ +++ Y GC + C+ G ++EA L + M
Sbjct: 429 KQLHGRLVKGGYET-------GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 474 ------------------------MAPDVLILGALLSACKDKGILKLPTRY 500
+ PD + A+LSAC G++ +Y
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 225/530 (42%), Gaps = 71/530 (13%)
Query: 1 MSRIRLNLKWVLLDYI-RRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDF-FGKSVDFV 58
+SR L + L+ + RRCNN H+ +KR KS
Sbjct: 9 LSRRAQQLHYTSLNGLKRRCNNAHGAANFHS-------------LKRATQTQIQKSQTKP 55
Query: 59 DFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKS 118
CG +W V+ ISSY + R A+ ++++ R S ++ M+
Sbjct: 56 LLKCGDSDIKEWNVA-------ISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISG 104
Query: 119 CAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSW 178
+L GE + +M DL N ++ Y + A ++F+ MP RDV SW
Sbjct: 105 ---YLRNGEFELARKLFDEMPER-DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 179 TSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
++++GYA+ G D+A ++F M E N ++ +LL ++ + ++FK
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRM-PEKNDVSWNALLSAYVQNSKMEEA----CMLFKSRE 215
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+L + N L+ +VK + + EA+Q F + +D+VSW +II+G Q + E+ LF +
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 299 MHSSGIEP-----DGVILTSVLSACANVGD-------LDYGRWVHEYIDRRAIK------ 340
+ G I ++ + D + + + Y+ ++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 341 -----RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALK 395
R++ M+ YA+CG I A F++MP ++ +W A++ G + G + AL+
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD- 454
F +M EG N +F + L+ C ++ G++ +++ Y GC
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-------GCFVGN 448
Query: 455 ----LLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRY 500
+ C+ G ++EA L + M D++ +++ G ++ R+
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRF 497
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 13/256 (5%)
Query: 79 SLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM 138
++I+ Y+ S A+ + Q+ R G + +F + L +CA + + G Q+HG ++K
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 139 GLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF 198
G +V N+L+ +Y C A +F EM +D+VSW ++IAGY+R G + A+ F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 199 LSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM-DMYVK 254
SM E P+ AT V++L C +G + GR+ + + + A M D+ +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 255 CECLSEAKQIFHELP-KKDIVSWTSI-----ISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
L +A + +P + D W ++ + G + + + +SG+
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY--- 615
Query: 309 VILTSVLSACANVGDL 324
V+L+++ ++ GD+
Sbjct: 616 VLLSNLYASSGRWGDV 631
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 255/504 (50%), Gaps = 39/504 (7%)
Query: 21 NLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSL 80
+L+ +++H +V G N + +VD +GK D F + + S +N +
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN--PSDVSWNVI 234
Query: 81 ISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGL 140
+ Y A++ + +++ P ++T +++ +C+ L + G IH I +K+ +
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV 294
Query: 141 VCDLYVQNSLVHLYGVCDDCRSAGKVFDE------------------------------- 169
V D V S+ +Y CD SA +VFD+
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 170 MPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMG 226
MP R++VSW +++ GY A +DEA+ M E + T V +L C +++MG
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK-KDIVSWTSIISGLVQ 285
++ HG I++ ++ +NAL+DMY KC L A F ++ + +D VSW ++++G+ +
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 286 CQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHI 345
R +++L F M +P L ++L+ CAN+ L+ G+ +H ++ R K D+ I
Sbjct: 475 VGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVI 533
Query: 346 GTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS 405
AMVDMY+KC C + A++ F E +++ WN+++ G +GR + F + EG
Sbjct: 534 RGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGV 593
Query: 406 TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
P+ VTFL IL AC G V+ G +YF+ M S +Y++SP++EHY CM +L C+ G L +
Sbjct: 594 KPDHVTFLGILQACIREGHVELGFQYFSSM-STKYHISPQVEHYDCMIELYCKYGCLHQL 652
Query: 466 LMLVRTMPMAPDVLILGALLSACK 489
+ MP P + +L + AC+
Sbjct: 653 EEFLLLMPFDPPMQMLTRINDACQ 676
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 240/527 (45%), Gaps = 56/527 (10%)
Query: 10 WVLLDYIRRCNN---LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLK 66
W+ R C++ + +K+ + LVT + ++ R ++ +GK CG +
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGK--------CGCVD 113
Query: 67 QCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA 120
P +N++I++ A + +R++ R+G +F +LKSC
Sbjct: 114 DARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCG 173
Query: 121 MFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTS 180
+ L + Q+H V+K G ++ ++ S+V +YG C A +VFDE+ VSW
Sbjct: 174 LILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNV 233
Query: 181 IIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
I+ Y G DEAV MF L +NV P T S+++ C RS L +G+ IH + K +
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 238 SKVSLEASNALMDMYVKCECLS-------------------------------EAKQIFH 266
S ++ DMYVKC+ L EA+++F
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 267 ELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
+P+++IVSW +++ G V E+L M D V L +L+ C+ + D+
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 327 GRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM-PCKNIFTWNALLNGLA 385
G+ H +I R ++ + A++DMY KCG ++ A F +M ++ +WNALL G+A
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 386 MHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPR 445
GR AL FFE M E + P++ T +L C + ++ G+ +I Y +
Sbjct: 474 RVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 446 LEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+ G M D+ + D A+ + + D+++ +++ C G
Sbjct: 533 IR--GAMVDMYSKCRCFDYAIEVFKE-AATRDLILWNSIIRGCCRNG 576
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 189/421 (44%), Gaps = 37/421 (8%)
Query: 107 PDSY-TFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGK 165
P SY + + +SC+ + + ++ ++ + +++ N + YG C A +
Sbjct: 58 PVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARE 117
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGN 222
+F+EMP RD SW ++I A+ G+ DE MF MN V +F +L CG +
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILD 177
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
LR+ R++H + K +++ +++D+Y KC +S+A+++F E+ VSW I+
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRR 237
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
++ E++V+F KM + P ++SV+ AC+ L+ G+ +H + ++ D
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNE-------------------------------MPC 371
+ T++ DMY KC +E A + F++ MP
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+NI +WNA+L G AL F M E + VT + IL C V G++
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
+ Y+ + + + + D+ + G L A + R M D + ALL+
Sbjct: 418 HGFIYRHGYDTNVIVAN--ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 492 G 492
G
Sbjct: 476 G 476
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 253/480 (52%), Gaps = 7/480 (1%)
Query: 13 LDYIRRCNNLK-SFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
+ +++ + LK +IHA ++++G + N + R + + + + + R
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQR 79
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
S +NS+I Y+ P + Y Q++ PDS TF +K+C L + +G +
Sbjct: 80 GVSV-YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
+ G D++V +S+++LY C A +F +M RDV+ WT+++ G+A+AG
Sbjct: 139 WCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKS 198
Query: 192 DEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+AV + M E + + LL G G+ +MGR +HG +++ +++ +L
Sbjct: 199 LKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+DMY K + A ++F + K VSW S+ISG Q ++ +M S G +PD
Sbjct: 259 VDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDL 318
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
V L VL AC+ VG L GR VH YI +R + D TA++DMY+KCG + + + F
Sbjct: 319 VTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEH 377
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
+ K++ WN +++ +HG G + F +M P+ TF ++L+A HSGLV++G
Sbjct: 378 VGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+ +F+ MI+ +Y + P +HY C+ DLL RAG ++EAL ++ + + + I ALLS C
Sbjct: 438 QHWFSVMIN-KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGC 496
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 41/305 (13%)
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSE---AKQIFHELPKKDIVSWTSIISGLV 284
+IH + + L S+ D+ C + E A+++F ELP++ + + S+I
Sbjct: 35 QIHAFVISTGNL--LNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
+ + P E L L+ +M + I+PD T + AC + L+ G V K D+
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
+ ++++++Y KCG ++ A F +M +++ W ++ G A G+ A++F+ EM EG
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD- 463
+ V L +L A G GR + ++ +E + D+ + G ++
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE--TSLVDMYAKVGFIEV 270
Query: 464 ---------------------------------EALMLVRTMPMAPDVLILGALLSACKD 490
EA++ ++++ PD++ L +L AC
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 491 KGILK 495
G LK
Sbjct: 331 VGSLK 335
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 221/421 (52%), Gaps = 8/421 (1%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N++IS Y + A++ + +V D T +ML C + G +H +
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
V + L + V+N+LV++Y C A VFD M RDV++WT +I GY G + A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 195 VTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ + M E PN T SL+ CG + + G+ +HG ++ + +L+ M
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y KC+ + ++F K W++II+G VQ + ++L LF++M +EP+ L
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN---- 367
S+L A A + DL +H Y+ + + T +V +Y+KCG +E A + FN
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
+ K++ W AL++G MHG G+ AL+ F EMV G TPNE+TF + L AC HSGLV++
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G F M+ + Y R HY C+ DLL RAG LDEA L+ T+P P + GALL+A
Sbjct: 544 GLTLFRFML-EHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 488 C 488
C
Sbjct: 603 C 603
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 243/499 (48%), Gaps = 43/499 (8%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL++ ++ K +H ++T G V ++ V + CG +
Sbjct: 21 LLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYAL---------CGHITYARKL 71
Query: 72 VSSFPFNSLISS------YAGSDRPQIAILCYRQIVRNGF--LPDSYTFPAMLKSCAMFL 123
P +SL+S Y AI + ++V G +PD YT+P + K+
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
+ G+ +HG +++ D YVQN+L+ +Y A VFD M RDV+SW ++I+
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 184 GYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
GY R G ++A+ MF ++ +V+ + AT VS+L CG +L MGR +H L+ ++
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
+E NAL++MY+KC + EA+ +F + ++D+++WT +I+G + + +L L R M
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
G+ P+ V + S++S C + ++ G+ +H + R+ + DI I T+++ MYAKC ++
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 361 RALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
+ F+ + W+A++ G + AL F+ M E PN T ++L A
Sbjct: 372 LCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA-- 429
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL---------LDEALML--- 468
++ L D + Q N+ L G M+ L GL L+ A +
Sbjct: 430 YAALAD---------LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 469 VRTMPMAPDVLILGALLSA 487
++ + DV++ GAL+S
Sbjct: 481 IQEKHKSKDVVLWGALISG 499
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 250/475 (52%), Gaps = 7/475 (1%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K IH+ ++ GI N ++ +VDF+ + D + V F + S++S +
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV--FLWTSVVSGFV 301
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ R + A+ + ++ G P+++T+ A+L C+ + G QIH IK+G
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 146 VQNSLVHLYGVCDDCR-SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM--- 201
V N+LV +Y C A +VF M +VVSWT++I G G + + + M
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
VEPN T +L C + ++R IH + +R + N+L+D Y + A
Sbjct: 422 EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYA 481
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
+ + ++D +++TS+++ + + + +L + M+ GI D + L +SA AN+
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANL 541
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
G L+ G+ +H Y + + ++VDMY+KCG +E A + F E+ ++ +WN L+
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLV 601
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
+GLA +G +AL FEEM + + P+ VTFL +L+AC + L D G +YF Q++ + YN
Sbjct: 602 SGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF-QVMKKIYN 660
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ P++EHY + +L RAG L+EA +V TM + P+ +I LL AC+ +G L L
Sbjct: 661 IEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSL 715
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 5/349 (1%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F + +IS++ S A+ + +++ +G P+ +TF ++++SCA I G ++HG
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
VIK G + V +SL LY C + A ++F + D +SWT +I+ A + EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 195 VTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ + M V PN TFV LL G L G+ IH I R +++ +L+D
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y + + +A ++ + ++D+ WTS++SG V+ R KE++ F +M S G++P+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE-RALQTFNEMP 370
+++LS C+ V LD+G+ +H + + +G A+VDMY KC E A + F M
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
N+ +W L+ GL HG EMV PN VT +L AC
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 12/400 (3%)
Query: 105 FLPDSYTFPAMLKSCAMFLGIGE------GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
FL + + KSC L E G+ IH VIK GL+ +L + N+L+ LY D
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLV 215
+A K+FDEM R V +WT +I+ + ++ F A+++F M PN TF S++
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVR 132
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVS 275
C ++ G R+HG + K + + ++L D+Y KC EA ++F L D +S
Sbjct: 133 SCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS 192
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
WT +IS LV ++ +E+L + +M +G+ P+ +L A + +G L++G+ +H I
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALK 395
R I ++ + T++VD Y++ +E A++ N +++F W ++++G + R A+
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG 311
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDL 455
F EM G PN T+ AIL+ C +D G++ +Q I + S + + + D+
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN--ALVDM 369
Query: 456 LCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILK 495
+ + V ++P+V+ L+ D G ++
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 157/368 (42%), Gaps = 48/368 (13%)
Query: 16 IRRCNNLKSFKK---IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
+R C+ L+ ++ IHA L+ + +V +VD + S VD+ ++ R
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK-VDYAWNVIRSMKRR- 491
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
+ + SL++ + + ++A+ + +G D + P + + A + G +H
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLH 551
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
+K G V NSLV +Y C A KVF+E+ DVVSW +++G A G
Sbjct: 552 CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFIS 611
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A++ F M EP++ TF+ LL C R + + LE +
Sbjct: 612 SALSAFEEMRMKETEPDSVTFLILLSACSNG---------------RLTDLGLEYFQVM- 655
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
K+I++ P+ + + ++ L + R +E+ + MH ++P+ +
Sbjct: 656 ------------KKIYNIEPQ--VEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAM 698
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIK---RDIHIGTAMVDMYAKCGCIERALQTF 366
I ++L AC G+L G E + + + D + + D+Y + G E A +T
Sbjct: 699 IFKTLLRACRYRGNLSLG----EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTR 754
Query: 367 NEMPCKNI 374
N M K +
Sbjct: 755 NLMTEKRL 762
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 116 LKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDV 175
L+ CA + +H ++K+G+V + N+LV++YG C A +VFDEMP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
++W S++ +A L + +++F S+ + P+ F +L+ C G++ GR++H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
++L+DMY KC L+ AK +F + K+ +SWT+++SG + R +E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 292 SLVLFRKM-----------------HSSGIEP---------------DGVILTSVLSACA 319
+L LFR + G+E D ++L+S++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
N+ GR VH + + I A++DMYAKC + A F+ M +++ +W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
L+ G+A HG+ AL +++MV G PNEVTF+ ++ AC H G V+KGR+ F M ++
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM-TKD 368
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
Y + P L+HY C+ DLL R+GLLDEA L+ TMP PD ALLSACK +G
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 57/466 (12%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPF 77
R L + K +HA +V GIV+ + +V+ +GK CG P
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGK--------CGAASHALQVFDEMPH 66
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNG-------FLPDSYTFPAMLKSCAMFLGIGEGMQ 130
I+ + A L + + PD + F A++K+CA I G Q
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H I D V++SLV +Y C SA VFD + V++ +SWT++++GYA++G
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 191 FDEAVTMFLSMNVEPNTATFVSLLVGCGRSG----------------------------- 221
+EA+ +F + V+ N ++ +L+ G +SG
Sbjct: 187 KEEALELFRILPVK-NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 222 ----NLRM---GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIV 274
NL GR++HGL+ + SNAL+DMY KC + AK IF + +D+V
Sbjct: 246 GACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 275 SWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI 334
SWTS+I G+ Q + +++L L+ M S G++P+ V ++ AC++VG ++ GR + + +
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 335 DRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNIFTWNALLNGLAMHGRGYA 392
+ I+ + T ++D+ + G ++ A + MP + TW ALL+ GRG
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 393 ALKFFEEMVGEGSTPNEVTFL---AILTACCHSGLVDKGRKYFNQM 435
++ + +V + T++ I + G V + R+ +M
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 37/234 (15%)
Query: 1 MSRIRLNL--KWVLLDYIRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSV 55
M R R+++ VL + C NL + +++H ++ G + ++D + K
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 56 DFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAM 115
D + F + V S+ SLI A + + A+ Y +V +G P+ TF +
Sbjct: 288 DVIAAKDIFSRMRHRDVVSW--TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 116 LKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDV 175
+ +C+ + +G ++ + K D ++ SL H
Sbjct: 346 IYACSHVGFVEKGRELFQSMTK-----DYGIRPSLQH----------------------- 377
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRI 229
+T ++ R+GL DEA + +M P+ T+ +LL C R G +MG RI
Sbjct: 378 --YTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 250/482 (51%), Gaps = 24/482 (4%)
Query: 20 NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP--- 76
++L+ KKIHA ++ G V + V ++ + K GC + + P
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK------LGCAW--DAEKVFEEMPERD 195
Query: 77 ---FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+NS+IS Y +++ ++++++ GF PD ++ + L +C+ G +IH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 134 IVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
++ + D+ V S++ +Y + A ++F+ M R++V+W +I YAR G
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 193 EAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+A F M+ ++P+ T ++LL + GR IHG +R + AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+DMY +C L A+ IF + +K+++SW SII+ VQ + +L LF+++ S + PD
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
+ S+L A A L GR +H YI + + I ++V MYA CG +E A + FN
Sbjct: 432 TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNH 491
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
+ K++ +WN+++ A+HG G ++ F EM+ PN+ TF ++L AC SG+VD+G
Sbjct: 492 ILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+YF M ++Y + P +EHYGCM DL+ R G A + MP P I G+LL+A
Sbjct: 552 WEYFESM-KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNAS 610
Query: 489 KD 490
++
Sbjct: 611 RN 612
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 203/375 (54%), Gaps = 9/375 (2%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ +F +N +I + A+ Y ++V G D++T+P ++KS A + EG +
Sbjct: 92 KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKK 151
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IH +VIK+G V D+YV NSL+ LY A KVF+EMP RD+VSW S+I+GY G
Sbjct: 152 IHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIH-GLIFKRASKVSLEASN 246
++ +F M +P+ + +S L C + +MG+ IH + R +
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM-HSSGIE 305
+++DMY K +S A++IF+ + +++IV+W +I + R ++ + F+KM +G++
Sbjct: 272 SILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
PD + ++L A A + GR +H Y RR + + TA++DMY +CG ++ A
Sbjct: 332 PDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F+ M KN+ +WN+++ +G+ Y+AL+ F+E+ P+ T +IL A S +
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSL 447
Query: 426 DKGRKYFNQMISQQY 440
+GR+ ++ +Y
Sbjct: 448 SEGREIHAYIVKSRY 462
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 143/261 (54%), Gaps = 5/261 (1%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
A ++FDEM D W +I G+ GL+ EAV + M V+ +T T+ ++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
+L G++IH ++ K + N+L+ +Y+K C +A+++F E+P++DIVSW S+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ISG + SL+LF++M G +PD S L AC++V G+ +H + R I
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 340 KR-DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFE 398
+ D+ + T+++DMY+K G + A + FN M +NI WN ++ A +GR A F+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 399 EMVGE-GSTPNEVTFLAILTA 418
+M + G P+ +T + +L A
Sbjct: 323 KMSEQNGLQPDVITSINLLPA 343
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%)
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
+K +V+ A + + + +A Q+F E+ K D W +I G C E++
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
+ +M +G++ D V+ + A + L+ G+ +H + + D+++ +++ +Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
K GC A + F EMP ++I +WN++++G G G+++L F+EM+ G P+ + +
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 414 AILTACCH 421
+ L AC H
Sbjct: 236 SALGACSH 243
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 257/480 (53%), Gaps = 18/480 (3%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV-SSFPFNSLISSY 84
K++H+ ++ +G VV ++ + VD C ++ D V FN +I
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVD-ACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 85 AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDL 144
AG R + ++L +R+++ P TF +++ SC+ G Q+HG+ IK G
Sbjct: 268 AGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYT 323
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-- 202
V N+ + +Y +D +A KVF+ + +D+V+W ++I+ Y +A L A++++ M+
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 203 -VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
V+P+ TF SLL S +L + + I K +E SNAL+ Y K + +A
Sbjct: 384 GVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE--PDGVILTSVLSACA 319
+F +K+++SW +IISG P E L F + S + PD L+++LS C
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
+ L G H Y+ R ++ IG A+++MY++CG I+ +L+ FN+M K++ +WN+
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
L++ + HG G A+ ++ M EG P+ TF A+L+AC H+GLV++G + FN M+ +
Sbjct: 561 LISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV-E 619
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVR--TMPMAPDVLILGALLSACKDKGILKL 496
+ + ++H+ C+ DLL RAG LDEA LV+ + V + AL SAC G LKL
Sbjct: 620 FHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 679
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 45/398 (11%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
PD Y+ + + G Q+H I+ GL+C +V N+L+ LY + S K
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRS------ 220
FDE+ DV SWT++++ + G + A +F M + A + +++ GC S
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 221 ----------------------------GNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
G+L G+++H L+ K ++ NAL+ MY
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 253 VKCECLSEAKQIFHE--LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
C+ + +A +F E + +D V++ +I GL +R ESL++FRKM + + P +
Sbjct: 235 FNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLT 293
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
SV+ +C+ G VH + ++ + A + MY+ A + F +
Sbjct: 294 FVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE 350
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
K++ TWN +++ G +A+ ++ M G P+E TF ++L +++
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---- 406
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
Q ++ LS ++E + + G +++A +L
Sbjct: 407 -MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLL 443
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILT 312
K CL+E+ E +++ ++GL + + +L LF +H + + PD ++
Sbjct: 3 KALCLTESLSAIAE-NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVS 61
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
++ ++ D +G VH Y R + H+ ++ +Y + G + + F+E+
Sbjct: 62 LAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEP 121
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
++++W LL+ G A + F++M + + A++T C SG + + F
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKM---PERDDVAIWNAMITGCKESGYHETSVELF 178
Query: 433 NQMISQQYNLSPRLEHYGCMTDL-LCRAGLLD 463
+M + L R + +G T L +C G LD
Sbjct: 179 REM----HKLGVRHDKFGFATILSMCDYGSLD 206
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 229/448 (51%), Gaps = 45/448 (10%)
Query: 92 IAILCYRQIVRNGFL-------PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDL 144
I +LC ++++R P + T+ +++ C+ + EG ++H + G V +
Sbjct: 61 IDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI 120
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE 204
+ N L+ +Y C A KVFDEMP RD+ SW ++ GYA GL +EA +F M E
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM-TE 179
Query: 205 PNTATFVSLLVGCGRSGN------------------------------------LRMGRR 228
++ ++ +++ G + +R G+
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR 288
IHG I + ++LMDMY KC C+ EA+ IF ++ +KD+VSWTS+I + R
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+E LF ++ S P+ VL+ACA++ + G+ VH Y+ R ++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPN 408
+VDMY KCG IE A + P ++ +W +L+ G A +G+ ALK+F+ ++ G+ P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 409 EVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
VTF+ +L+AC H+GLV+KG ++F I++++ LS +HY C+ DLL R+G ++ +
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYS-ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSV 478
Query: 469 VRTMPMAPDVLILGALLSACKDKGILKL 496
+ MPM P + ++L C G + L
Sbjct: 479 ISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 218/459 (47%), Gaps = 38/459 (8%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ-----CDWRV---- 72
L+ KK+H + TSG V ++ R++ + K VD F + C W V
Sbjct: 101 LEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNG 160
Query: 73 --------------------SSFPFNSLISSYAGSDRPQIAILCYRQIVR-NGFLPDSYT 111
S+ + ++++ Y D+P+ A++ Y + R P+ +T
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
+ + A I G +IHG +++ GL D + +SL+ +YG C A +FD++
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRR 228
+DVVSWTS+I Y ++ + E ++F + PN TF +L C +G++
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR 288
+HG + + AS++L+DMY KC + AK + PK D+VSWTS+I G Q +
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQ 400
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGT 347
P E+L F + SG +PD V +VLSAC + G ++ G + + ++ + T
Sbjct: 401 PDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 348 AMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
+VD+ A+ G E+ +EMP K + F W ++L G + +G A + +E+ +
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF-KIEP 519
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPR 445
N VT++ + +G ++ K +M Q+ ++ R
Sbjct: 520 ENPVTYVTMANIYAAAGKWEEEGKMRKRM--QEIGVTKR 556
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 204/376 (54%), Gaps = 15/376 (3%)
Query: 130 QIHGIVIKMGLV---CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
Q+H ++ L++ ++ L D A +VFD + W ++I A
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 187 R-AGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
+EA ++ M P+ TF +L C G+++H I K
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD 185
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ +N L+ +Y C CL A+++F E+P++ +VSW S+I LV+ +L LFR+M
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR 245
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA---IKRDIHIGTAMVDMYAKCGC 358
S EPDG + SVLSACA +G L G W H ++ R+ + D+ + ++++MY KCG
Sbjct: 246 S-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG--EGSTPNEVTFLAIL 416
+ A Q F M +++ +WNA++ G A HGR A+ FF+ MV E PN VTF+ +L
Sbjct: 305 LRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLL 364
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
AC H G V+KGR+YF+ M+ + Y + P LEHYGC+ DL+ RAG + EA+ +V +MPM P
Sbjct: 365 IACNHRGFVNKGRQYFDMMV-RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 477 DVLILGALLSACKDKG 492
D +I +LL AC KG
Sbjct: 424 DAVIWRSLLDACCKKG 439
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 199/400 (49%), Gaps = 25/400 (6%)
Query: 19 CNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF-LKQCDWRVSSFPF 77
C+++ K++HA + + + S F D F + SSF +
Sbjct: 58 CSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 117
Query: 78 NSLISSYAGS-DRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
N+LI + A R + A + YR+++ G PD +TFP +LK+CA G EG Q+H +
Sbjct: 118 NTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQI 177
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
+K G D+YV N L+HLYG C A KVFDEMP R +VSW S+I R G +D A+
Sbjct: 178 VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 196 TMFLSM--NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS---KVSLEASNALMD 250
+F M + EP+ T S+L C G+L +G H + ++ + + N+L++
Sbjct: 238 QLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM--HSSGIEPDG 308
MY KC L A+Q+F + K+D+ SW ++I G R +E++ F +M + P+
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM------VDMYAKCGCIERA 362
V +L AC + G ++ GR +Y D + RD I A+ VD+ A+ G I A
Sbjct: 358 VTFVGLLIACNHRGFVNKGR---QYFD--MMVRDYCIEPALEHYGCIVDLIARAGYITEA 412
Query: 363 LQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+ MP K + W +LL+ G A+++ EE+
Sbjct: 413 IDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEEIA 449
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 224/419 (53%), Gaps = 18/419 (4%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHG 133
FP N L+ + +D + ++P D + +LK C +F + +G +H
Sbjct: 37 FPSNDLLLRTSSND------------LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHA 84
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+++ D+ + N+L+++Y C A KVF++MP RD V+WT++I+GY++ +
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 194 AVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A+ F L PN T S++ G ++HG K ++ +AL+D
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
+Y + + +A+ +F L ++ VSW ++I+G + +++L LF+ M G P
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
S+ AC++ G L+ G+WVH Y+ + K G ++DMYAK G I A + F+ +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+++ +WN+LL A HG G A+ +FEEM G PNE++FL++LTAC HSGL+D+G
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
Y+ M ++ + P HY + DLL RAG L+ AL + MP+ P I ALL+AC+
Sbjct: 385 YYELM--KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 204/389 (52%), Gaps = 30/389 (7%)
Query: 28 IHAQLVTSGIVRNDLVV-KRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP------FNSL 80
+HA ++ S I R+D+V+ +++ + K CG L++ P + +L
Sbjct: 82 VHAHILQS-IFRHDIVMGNTLLNMYAK--------CGSLEEARKVFEKMPQRDFVTWTTL 132
Query: 81 ISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGL 140
IS Y+ DRP A+L + Q++R G+ P+ +T +++K+ A G Q+HG +K G
Sbjct: 133 ISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF 192
Query: 141 VCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
+++V ++L+ LY G+ DD A VFD + R+ VSW ++IAG+AR ++A+ +
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDD---AQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 198 FLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F M P+ ++ SL C +G L G+ +H + K K+ A N L+DMY K
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
+ +A++IF L K+D+VSW S+++ Q KE++ F +M GI P+ + SV
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-N 373
L+AC++ G LD G +E + + I + +VD+ + G + RAL+ EMP +
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT 429
Query: 374 IFTWNALLNGLAMHGR----GYAALKFFE 398
W ALLN MH YAA FE
Sbjct: 430 AAIWKALLNACRMHKNTELGAYAAEHVFE 458
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 4/365 (1%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IH + I G ++ V N L+ Y C S VFD M R+V++ T++I+G L
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
++ + +F M V PN+ T++S L C S + G++IH L++K + L +A
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
LMDMY KC + +A IF + D VS T I+ GL Q +E++ F +M +G+E D
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
++++VL L G+ +H + +R + + +++MY+KCG + + F
Sbjct: 357 ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
MP +N +WN+++ A HG G AALK +EEM P +VTFL++L AC H GL+DK
Sbjct: 417 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDK 476
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
GR+ N+M + + + PR EHY C+ D+L RAGLL EA + ++P+ PD I ALL A
Sbjct: 477 GRELLNEM-KEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGA 535
Query: 488 CKDKG 492
C G
Sbjct: 536 CSFHG 540
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 159/332 (47%), Gaps = 4/332 (1%)
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM-- 201
L V NSL+ LY C A K+FDEMP+RDV+S + G+ R + + M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
+ + AT +L C + + IH L + N L+ Y KC C
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
+ +F + +++++ T++ISGL++ + ++ L LF M + P+ V S L+AC+
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
+ G+ +H + + I+ ++ I +A++DMY+KCG IE A F + + +L
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
GLA +G A++FF M+ G + A+L + G++ + +I ++++
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
+ + + + ++ + G L ++ + R MP
Sbjct: 390 GNTFVNN--GLINMYSKCGDLTDSQTVFRRMP 419
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 213 LLVGCGRSGNL-RMGRRIHGLIFKRAS----------KVSLEASNALMDMYVKCECLSEA 261
LL CGR G +G +H I K + +L N+L+ +Y KC L +A
Sbjct: 50 LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
++F E+P +D++S + G ++ + + VL ++M SG D LT VLS C
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTP 168
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
+ +H ++I +G ++ Y KCGC F+ M +N+ T A++
Sbjct: 169 EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVI 228
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
+GL + L+ F M PN VT+L+ L AC S + +G++ + +Y
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI--HALLWKYG 286
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
+ L + D+ + G +++A + + +V
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 131/323 (40%), Gaps = 52/323 (16%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
++IHA L GI + ++D + K D F + V ++ A
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIF--ESTTEVDEVSMTVILVGLA 333
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ + AI + ++++ G D+ A+L + +G G Q+H +VIK + +
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN--- 202
V N L+++Y C D + VF MP R+ VSW S+IA +AR G A+ ++ M
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGR-------RIHGLIFKRASKVSLEASNALMDMYVKC 255
V+P TF+SLL C G + GR +HG+ + E ++DM +
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI------EPRTEHYTCIIDMLGRA 507
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
L EAK LP K PD I ++L
Sbjct: 508 GLLKEAKSFIDSLPLK----------------------------------PDCKIWQALL 533
Query: 316 SACANVGDLDYGRWVHEYIDRRA 338
AC+ GD + G + E + + A
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQTA 556
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 224/412 (54%), Gaps = 12/412 (2%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A++ +R ++R G D +F +++ +C + QIHG+ IK G L V N L+
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 153 LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTAT 209
Y C + VF +M R+VVSWT++I+ D+AV++FL+M V PN T
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 374
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
FV L+ + ++ G +IHGL K N+ + +Y K E L +AK+ F ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 270 KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD--YG 327
++I+SW ++ISG Q E+L +F + + P+ SVL+A A D+ G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG 493
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
+ H ++ + + + +A++DMYAK G I+ + + FNEM KN F W ++++ + H
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G + F +M+ E P+ VTFL++LTAC G+VDKG + FN MI + YNL P E
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMI-EVYNLEPSHE 612
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
HY CM D+L RAG L EA L+ +P P +L ++L +C+ G +K+ +
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAK 664
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 11/364 (3%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLP---DSYTFPAMLKSCAMFLGIGE 127
R ++ N IS + P A+ +++ ++ G+ D T LK+C L
Sbjct: 37 RNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLK--R 94
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
G QIHG G + V N+++ +Y +A +F+ + DVVSW +I++G+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 188 AGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ V S V + T+ + L C S +G ++ + K + L N+
Sbjct: 155 NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNS 214
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ-CQRPKESLVLFRKMHSSGIEP 306
+ MY + A+++F E+ KD++SW S++SGL Q E++V+FR M G+E
Sbjct: 215 FITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVEL 274
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D V TSV++ C + DL R +H +R + + +G ++ Y+KCG +E F
Sbjct: 275 DHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVF 334
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
++M +N+ +W +++ A+ F M +G PNEVTF+ ++ A + +
Sbjct: 335 HQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK 389
Query: 427 KGRK 430
+G K
Sbjct: 390 EGLK 393
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 226/420 (53%), Gaps = 6/420 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF-LGIGEGMQIHGIV 135
+NS+I+ A + A+ + Q++R G PD YT ++LK+ + G+ Q+H
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
IK+ V D +V +L+ Y + C ++ E D+V+W +++AGY ++ + +
Sbjct: 444 IKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 196 TMFLSMNVEPNTA---TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+F M+ + + T ++ CG + G+++H K + L S+ ++DMY
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
VKC +S A+ F +P D V+WT++ISG ++ + + +F +M G+ PD +
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
++ A + + L+ GR +H + D +GT++VDMYAKCG I+ A F +
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
NI WNA+L GLA HG G L+ F++M G P++VTF+ +L+AC HSGLV + K+
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM 742
Query: 433 NQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
M Y + P +EHY C+ D L RAGL+ +A L+ +M M + LL+AC+ +G
Sbjct: 743 RSM-HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 207/464 (44%), Gaps = 37/464 (7%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
N +S Y S + + C+ +V + D TF ML + + G Q+H + +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
+GL L V NSL+++Y A VFD M RD++SW S+IAG A+ GL EAV +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 198 FLSM---NVEPNTATFVSLLVGCGR-SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
F+ + ++P+ T S+L L + +++H K + S AL+D Y
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
+ C+ EA+ +F E D+V+W ++++G Q ++L LF MH G D L +
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
V C + ++ G+ VH Y + D+ + + ++DMY KCG + A F+ +P +
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK-YF 432
W +++G +G A F +M G P+E T + A +++GR+ +
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 433 NQM-----------------------ISQQYNLSPRLE-----HYGCMTDLLCRAGLLDE 464
N + I Y L R+E + M L + G E
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 465 ALMLVRTMP---MAPDVLILGALLSACKDKGILKLPTRYTRPPH 505
L L + M + PD + +LSAC G++ ++ R H
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMH 746
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 160/329 (48%), Gaps = 8/329 (2%)
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLR 224
D V +++ ++ Y +G + + F M +VE + TF+ +L + +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 225 MGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
+G+++H + K + L SN+L++MY K A+ +F + ++D++SW S+I+G+
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD-LDYGRWVHEYIDRRAIKRDI 343
Q E++ LF ++ G++PD +TSVL A +++ + L + VH + + D
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+ TA++D Y++ C++ A F E ++ WNA++ G G+ LK F M +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G ++ T + C +++G++ I Y+L L + D+ + G +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD--LWVSSGILDMYVKCGDMS 569
Query: 464 EALMLVRTMPMAPDVLILGALLSACKDKG 492
A ++P+ PD + ++S C + G
Sbjct: 570 AAQFAFDSIPV-PDDVAWTTMISGCIENG 597
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 149/350 (42%), Gaps = 40/350 (11%)
Query: 77 FNSLISSYAGS-----DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+NS++++YA S + Q A L +R + ++ T MLK C +
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF 167
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
HG K+GL D +V +LV++Y + +F+EMP RDVV W ++ Y G
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 192 DEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+EA+ + F S + PN T LR+ RI G S N
Sbjct: 228 EEAIDLSSAFHSSGLNPNEIT-------------LRLLARISGDDSDAGQVKSFANGN-- 272
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ S ++ IF + + + S L++C F M S +E D
Sbjct: 273 -------DASSVSEIIFRNKGLSEYLH-SGQYSALLKC---------FADMVESDVECDQ 315
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
V +L+ V L G+ VH + + + + ++++MY K A F+
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
M +++ +WN+++ G+A +G A+ F +++ G P++ T ++L A
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
S +L +G+ H I N L+ MY KC L+ A+++F ++P +D+VSW SI
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 280 ISGLVQC-----QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI 334
++ Q + +++ +LFR + + + L+ +L C + G + H Y
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 335 DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
+ + D + A+V++Y K G ++ F EMP +++ WN +L G A+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 395 KFFEEMVGEGSTPNEVTF 412
G PNE+T
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL-----FDEAVTMFL 199
++ N+L+ +Y C A +VFD+MP RD+VSW SI+A YA++ +A +F
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 200 SMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA----SNALMDMY 252
+ V + T +L C SG + HG A K+ L+ + AL+++Y
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY----ACKIGLDGDEFVAGALVNIY 190
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
+K + E K +F E+P +D+V W ++ ++ +E++ L HSSG+ P+ + L
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 257/484 (53%), Gaps = 15/484 (3%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++H ++ G N V +VD + K D F + + +S +N+LI+ +
Sbjct: 66 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE--PNSVSWNALIAGFV 123
Query: 86 GSDRPQIAI-LCYRQIVRNGFLPDSYTFPAMLK--SCAMFLGIGEGMQIHGIVIKMGLVC 142
+ A L ++ D+ TF +L MF + + Q+H V+K+GL
Sbjct: 124 QVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK--QVHAKVLKLGLQH 181
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMP-VRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
++ + N+++ Y C A +VFD + +D++SW S+IAG+++ L + A +F+ M
Sbjct: 182 EITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM 241
Query: 202 N---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK--CE 256
VE + T+ LL C + G+ +HG++ K+ + A+NAL+ MY++
Sbjct: 242 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 301
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
+ +A +F L KD++SW SII+G Q ++++ F + SS I+ D +++L
Sbjct: 302 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 361
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN-IF 375
+C+++ L G+ +H + + + ++++ MY+KCG IE A + F ++ K+
Sbjct: 362 SCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 421
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
WNA++ G A HG G +L F +M + + VTF AILTAC H+GL+ +G + N +
Sbjct: 422 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN-L 480
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILK 495
+ Y + PR+EHY DLL RAGL+++A L+ +MP+ PD ++L L C+ G ++
Sbjct: 481 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIE 540
Query: 496 LPTR 499
+ T+
Sbjct: 541 MATQ 544
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 7/364 (1%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
S +N++IS Y + + A + + R+G D Y+F +LK A G Q+HG
Sbjct: 11 SVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHG 70
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+VIK G C++YV +SLV +Y C+ A + F E+ + VSW ++IAG+ +
Sbjct: 71 LVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT 130
Query: 194 AV----TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A M + V + TF LL + +++H + K + + NA++
Sbjct: 131 AFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMI 190
Query: 250 DMYVKCECLSEAKQIFHEL-PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
Y C +S+AK++F L KD++SW S+I+G + + + + LF +M +E D
Sbjct: 191 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 250
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK--CGCIERALQTF 366
T +LSAC+ +G+ +H + ++ +++ A++ MY + G +E AL F
Sbjct: 251 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 310
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
+ K++ +WN+++ G A G A+KFF + ++ F A+L +C +
Sbjct: 311 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 370
Query: 427 KGRK 430
G++
Sbjct: 371 LGQQ 374
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 167/346 (48%), Gaps = 18/346 (5%)
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGN 222
+FDEMP RD VSW ++I+GY G ++A +F M + + +F LL G
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
+G ++HGL+ K + ++ ++L+DMY KCE + +A + F E+ + + VSW ++I+G
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 283 LVQCQRPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
VQ + K + L M + + D +L+ + + + VH + + ++
Sbjct: 122 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 181
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEM-PCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
+I I AM+ YA CG + A + F+ + K++ +WN+++ G + H +A + F +M
Sbjct: 182 EITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM 241
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCR-- 458
+ T+ +L+AC G+ +I + LE T+ L
Sbjct: 242 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKK------GLEQVTSATNALISMY 295
Query: 459 ----AGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRY 500
G +++AL L ++ + D++ ++++ KG+ + ++
Sbjct: 296 IQFPTGTMEDALSLFESLK-SKDLISWNSIITGFAQKGLSEDAVKF 340
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 245/473 (51%), Gaps = 14/473 (2%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGS 87
+H +V +G+ + ++ ++D + K +D +CD R +NSLIS Y
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGK-LDQAMSLFDRCDER-DQVSWNSLISGYVRV 227
Query: 88 DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG---EGMQIHGIVIKMGLVCDL 144
+ + ++ R+G +Y ++LK+C + L G +GM IH K+G+ D+
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF-----DEAVTMFL 199
V+ +L+ +Y + A K+F MP ++VV++ ++I+G+ + EA +F+
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 200 SMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M +EP+ +TF +L C + L GR+IH LI K + +AL+++Y
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 257 CLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
+ Q F K+DI SWTS+I VQ ++ + + LFR++ SS I P+ ++ ++S
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT 376
ACA+ L G + Y + I + T+ + MYAK G + A Q F E+ ++ T
Sbjct: 468 ACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVAT 527
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
++A+++ LA HG AL FE M G PN+ FL +L ACCH GLV +G KYF Q +
Sbjct: 528 YSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYF-QCM 586
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
Y ++P +H+ C+ DLL R G L +A L+ + + ALLS+C+
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCR 639
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
DS + + ++ A + G HG +IK L LY+ N+L+++Y C + A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL---SMNVEPNTATFVSLLVGCGRSGNLR 224
D MP R+++S+ S+I+GY + G +++A+ +FL N++ + T+ L CG +L
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 225 MGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV 284
+G +HGL+ + N L+DMY KC L +A +F ++D VSW S+ISG V
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA---NVGDLDYGRWVHEYIDRRAIKR 341
+ +E L L KMH G+ L SVL AC N G ++ G +H Y + ++
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR-----GYAALKF 396
DI + TA++DMYAK G ++ A++ F+ MP KN+ T+NA+++G A K
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF-----NQMISQQYNLSPRLEHYGC 451
F +M G P+ TF +L AC + ++ GR+ N S ++ S +E Y
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 452 M 452
M
Sbjct: 406 M 406
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 210/486 (43%), Gaps = 50/486 (10%)
Query: 63 GFLKQCDWRVSS---FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSC 119
GF +Q R+ FNSLIS Y + A+ + + D +T+ L C
Sbjct: 99 GFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 120 AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWT 179
+ G +HG+V+ GL +++ N L+ +Y C A +FD RD VSW
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 180 SIIAGYARAGLFDEAVTMFLSMNVEP-NTATFV--SLLVGCG---RSGNLRMGRRIHGLI 233
S+I+GY R G +E + + M+ + N T+ S+L C G + G IH
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC-----QR 288
K + + AL+DMY K L EA ++F +P K++V++ ++ISG +Q +
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
E+ LF M G+EP + VL AC+ L+YGR +H I + + D IG+A
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPN 408
++++YA G E +Q F ++I +W ++++ + + +A F ++ P
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 409 EVTFLAILTACCHSGLVDKGRK-------------------------------YFNQMIS 437
E T +++AC + G + NQ+
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSACKDKGIL 494
+ N P + Y M L + G +EAL + +M + P+ +L AC G++
Sbjct: 519 EVQN--PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 495 KLPTRY 500
+Y
Sbjct: 577 TQGLKY 582
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 145/300 (48%), Gaps = 15/300 (5%)
Query: 198 FLSMNVEPNTATFVS-----LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
FLS +P S L +SG++ +G+ HG + K + L N L++MY
Sbjct: 33 FLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMY 92
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
KC L A+Q+F +P+++I+S+ S+ISG Q ++++ LF + + ++ D
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
L C DLD G +H + + + + + ++DMY+KCG +++A+ F+ +
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC---HSGLVDKGR 429
+ +WN+L++G G L +M +G ++L ACC + G ++KG
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 430 KY--FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
+ + ++++ R + D+ + G L EA+ L MP + +V+ A++S
Sbjct: 273 AIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISG 327
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 229/389 (58%), Gaps = 13/389 (3%)
Query: 106 LPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGK 165
L + F ++L++C I G+++H ++ L +L + + LV LY C A +
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 166 VFDEMPVRDV--VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRS 220
VFD M RD +W S+I+GYA G +++A+ ++ M V+P+ TF +L CG
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
G++++G IH + K + NAL+ MY KC + +A+ +F +P KD VSW S++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
+G + E+L +FR M +GIEPD V ++SVL A V +GR +H ++ RR ++
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
++ + A++ +Y+K G + +A F++M ++ +WNA+++ H + LK+FE+M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQM 382
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
+ P+ +TF+++L+ C ++G+V+ G + F+ ++S++Y + P++EHY CM +L RAG
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFS-LMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 461 LLDEAL-MLVRTMPMAPDVLILGALLSAC 488
+++EA M+V+ M + + GALL AC
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYAC 470
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 202/409 (49%), Gaps = 21/409 (5%)
Query: 4 IRLNLKWVLLDYIRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDF 60
I L + + C +L++ ++H L+ ++RN+L + + S + +
Sbjct: 87 ISLTEPEIFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 61 GCGFLKQCDWRVSS-FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSC 119
+ R SS F +NSLIS YA + + A+ Y Q+ +G PD +TFP +LK+C
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 120 AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWT 179
+ G IH ++K G D+YV N+LV +Y C D A VFD +P +D VSW
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 180 SIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR 236
S++ GY GL EA+ +F M +EP+ S+L R + + GR++HG + +R
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRR 322
Query: 237 ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF 296
+ L +NAL+ +Y K L +A IF ++ ++D VSW +IIS + L F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYF 379
Query: 297 RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAK 355
+MH + +PDG+ SVLS CAN G ++ G + + + I + MV++Y +
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 356 CGCIERALQTF-NEMPCKNIFT-WNALLNGLAMHGRG----YAALKFFE 398
G +E A EM + T W ALL +HG AA + FE
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 247/512 (48%), Gaps = 72/512 (14%)
Query: 47 VVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL 106
V+ + K D +D C F Q R S + ++I Y + AI +V+ G
Sbjct: 86 VLSAYSKRGD-MDSTCEFFDQLPQR-DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
P +T +L S A + G ++H ++K+GL ++ V NSL+++Y C D A V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN------------------------ 202
FD M VRD+ SW ++IA + + G D A+ F M
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 203 -----------VEPNTATFVSLLVGCGRSGNLRMGRRIHG-------------------- 231
+ P+ T S+L C L +G++IH
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 232 ------------LIFKRASK-VSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
LI +R +K + +E AL+D Y+K +++AK IF L +D+V+WT+
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA 338
+I G Q E++ LFR M G P+ L ++LS +++ L +G+ +H +
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 339 IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNIFTWNALLNGLAMHGRGYAALKFF 397
+ + A++ MYAK G I A + F+ + C ++ +W +++ LA HG AL+ F
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
E M+ EG P+ +T++ + +AC H+GLV++GR+YF+ M+ + P L HY CM DL
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD-MMKDVDKIIPTLSHYACMVDLFG 562
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
RAGLL EA + MP+ PDV+ G+LLSAC+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 202/502 (40%), Gaps = 132/502 (26%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV------------------ 172
+H VIK GL+ +Y+ N+L+++Y A K+FDEMP+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 173 -------------RDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVG 216
RD VSWT++I GY G + +A+ + M +EP T ++L
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI------------ 264
+ + G+++H I K + ++ SN+L++MY KC AK +
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 265 -------------------FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM-HSSGI 304
F ++ ++DIV+W S+ISG Q +L +F KM S +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYI---------------------------DRR 337
PD L SVLSACAN+ L G+ +H +I RR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 338 AIK----RDIHIG--TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
I+ +D+ I TA++D Y K G + +A F + +++ W A++ G HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 392 AALKFFEEMVGEGSTPNEVTFLAILTAC-----------CHSGLVDKGRKY-------FN 433
A+ F MVG G PN T A+L+ H V G Y
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 434 QMISQQYNLSP--------RLEH----YGCMTDLLCRAGLLDEALMLVRTMPMA---PDV 478
M ++ N++ R E + M L + G +EAL L TM M PD
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 479 LILGALLSACKDKGILKLPTRY 500
+ + SAC G++ +Y
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQY 537
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 212/371 (57%), Gaps = 14/371 (3%)
Query: 132 HGIVIKMGLVCDLYVQNSLV----HLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
H + I GL + Y + L+ HL + A +FD + + + + ++I +R
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 188 AGLFDEAVTMFLSM------NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
+ + FL M ++ P+ TF L+V C ++ +G++IH + K +S
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 242 L-EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
++ +YV+ + L +A+++F E+P+ D+V W +++G V+C E L +F++M
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI-DRRAIKRDIHIGTAMVDMYAKCGCI 359
GIEPD +T+ L+ACA VG L G+W+HE++ +R I+ D+ +GTA+VDMYAKCGCI
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE-GSTPNEVTFLAILTA 418
E A++ F ++ +N+F+W AL+ G A +G A + + E G P+ V L +L A
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
C H G +++GR M +Y ++P+ EHY C+ DL+CRAG LD+AL L+ MPM P
Sbjct: 331 CAHGGFLEEGRTMLENM-EARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA 389
Query: 479 LILGALLSACK 489
+ GALL+ C+
Sbjct: 390 SVWGALLNGCR 400
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 194/387 (50%), Gaps = 19/387 (4%)
Query: 17 RRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDF---VDFGCGFLKQCDWRVS 73
+RCN +K K H+ + G+ RN + +++ F + + + +
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP-N 77
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRN---GFLPDSYTFPAMLKSC--AMFLGIGEG 128
SF ++++I + S +P + + + +V+ P TF ++ +C A F +G+
Sbjct: 78 SFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGK- 136
Query: 129 MQIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
QIH V+K G+ + D +VQ ++ +Y A KVFDE+P DVV W ++ GY R
Sbjct: 137 -QIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 188 AGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI-FKRASKVSLE 243
GL E + +F M +EP+ + + L C + G L G+ IH + KR + +
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV-LFRKMHSS 302
AL+DMY KC C+ A ++F +L ++++ SW ++I G K++ L R
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIER 361
GI+PD V+L VL+ACA+ G L+ GR + E ++ R I + +VD+ + G ++
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Query: 362 ALQTFNEMPCKNIFT-WNALLNGLAMH 387
AL +MP K + + W ALLNG H
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 203/343 (59%), Gaps = 4/343 (1%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
A +F+ M D+V + S+ GY+R E ++F+ + + P+ TF SLL C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
+ L GR++H L K ++ L++MY +CE + A+ +F + + +V + ++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
I+G + RP E+L LFR+M ++P+ + L SVLS+CA +G LD G+W+H+Y + +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+ + + TA++DM+AKCG ++ A+ F +M K+ W+A++ A HG+ ++ FE
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M E P+E+TFL +L AC H+G V++GRKYF+QM+S ++ + P ++HYG M DLL RA
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS-KFGIVPSIKHYGSMVDLLSRA 380
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
G L++A + +P++P ++ LL+AC L L + +
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSE 423
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 210/394 (53%), Gaps = 13/394 (3%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
I +CN+L+ +I A + S I V K +++F +S + + + + S
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESP--TESSMSYARHL-FEAMSE 91
Query: 76 P----FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
P FNS+ Y+ P + +I+ +G LPD+YTFP++LK+CA+ + EG Q+
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H + +K+GL ++YV +L+++Y C+D SA VFD + VV + ++I GYAR
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 192 DEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+EA+++F M ++PN T +S+L C G+L +G+ IH K + ++ + AL
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+DM+ KC L +A IF ++ KD +W+++I + ++S+++F +M S ++PD
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 309 VILTSVLSACANVGDLDYGR-WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ +L+AC++ G ++ GR + + + + I I +MVD+ ++ G +E A + +
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 368 EMPCKNI-FTWNALLNGLAMHGRGYAALKFFEEM 400
++P W LL + H A K E +
Sbjct: 392 KLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%), Gaps = 6/217 (2%)
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+S A+ +F + + DIV + S+ G + P E LF ++ GI PD S+L A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM--PCKNIF 375
CA L+ GR +H + + ++++ +++MY +C ++ A F+ + PC +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC--VV 196
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+NA++ G A R AL F EM G+ PNE+T L++L++C G +D G+ +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK--WIHK 254
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+++++ ++ + D+ + G LD+A+ + M
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 232/434 (53%), Gaps = 14/434 (3%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
N LI S + + AI +++ P T+ ++ C + + +++H ++
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
G D ++ L+ +Y A KVFD+ R + W ++ AG +E + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 198 FLSMN---VEPNTATFVSLLVGCGRS----GNLRMGRRIHGLIFKRASKVSLEASNALMD 250
+ MN VE + T+ +L C S +L G+ IH + +R + L+D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM--HSSGIEPDG 308
MY + C+ A +F +P +++VSW+++I+ + + E+L FR+M + P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
V + SVL ACA++ L+ G+ +H YI RR + + + +A+V MY +CG +E + F+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
M +++ +WN+L++ +HG G A++ FEEM+ G++P VTF+++L AC H GLV++G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
++ F M + + + P++EHY CM DLL RA LDEA +V+ M P + G+LL +C
Sbjct: 406 KRLFETMW-RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 489 KDKGILKLPTRYTR 502
+ G ++L R +R
Sbjct: 465 RIHGNVELAERASR 478
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 13/373 (3%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAG 86
++H ++ +G ++ + +++ + + VD+ + R + + +N+L +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTRKR-TIYVWNALFRALTL 155
Query: 87 SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA----MFLGIGEGMQIHGIVIKMGLVC 142
+ + + Y ++ R G D +T+ +LK+C + +G +IH + + G
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN 202
+Y+ +LV +Y A VF MPVR+VVSW+++IA YA+ G EA+ F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 203 VE-----PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCEC 257
E PN+ T VS+L C L G+ IHG I +R L +AL+ MY +C
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
L +++F + +D+VSW S+IS K+++ +F +M ++G P V SVL A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 318 CANVGDLDYGRWVHEYIDR-RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIF 375
C++ G ++ G+ + E + R IK I MVD+ + ++ A + +M +
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 376 TWNALLNGLAMHG 388
W +LL +HG
Sbjct: 456 VWGSLLGSCRIHG 468
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 20 NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVDFVDFGCGFLKQCDWRVSSFPF 77
N+L K+IHA L G + ++ +VD + + VD+ + G + + +
Sbjct: 196 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN----VVSW 251
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRN--GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+++I+ YA + + A+ +R+++R P+S T ++L++CA + +G IHG +
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
++ GL L V ++LV +YG C +VFD M RDVVSW S+I+ Y G +A+
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 196 TMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFK-RASKVSLEASNALMDM 251
+F L+ P TFVS+L C G + G+R+ +++ K +E ++D+
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 252 YVKCECLSEAKQIFHEL 268
+ L EA ++ ++
Sbjct: 432 LGRANRLDEAAKMVQDM 448
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 222/382 (58%), Gaps = 11/382 (2%)
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H + +K+G D + N LV Y + +A K+FDEM +VVSWTS+I+GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 191 FDEAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
A++MF M+ V PN TF S+ C R+G+ IH + + ++ S+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 247 ALMDMYVKCECLSEAKQIFHELPK--KDIVSWTSIISGLVQCQRPKESLVLFRKMHS--S 302
+L+DMY KC + A+++F + +++VSWTS+I+ Q R E++ LFR ++ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
+ +L SV+SAC+++G L +G+ H + R + + + T+++DMYAKCG + A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F + C ++ ++ +++ A HG G AA+K F+EMV PN VT L +L AC HS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD--VLI 480
GLV++G +Y + +++++Y + P HY C+ D+L R G +DEA L +T+ + + L+
Sbjct: 351 GLVNEGLEYLS-LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 481 LGALLSACKDKGILKLPTRYTR 502
GALLSA + G +++ + ++
Sbjct: 410 WGALLSAGRLHGRVEIVSEASK 431
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 14/396 (3%)
Query: 6 LNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFL 65
L K L+ + N +H + G + V +V + K + F
Sbjct: 29 LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFD 88
Query: 66 KQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLG 124
+ C+ V S+ S+IS Y +PQ A+ ++++ + +P + YTF ++ K+C+
Sbjct: 89 EMCEPNVVSWT--SVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAE 146
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM--PVRDVVSWTSII 182
G IH + GL ++ V +SLV +YG C+D +A +VFD M R+VVSWTS+I
Sbjct: 147 SRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMI 206
Query: 183 AGYARAGLFDEAVTMFLSMNV-----EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
YA+ EA+ +F S N N S++ C G L+ G+ HGL+ +
Sbjct: 207 TAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGG 266
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFR 297
+ + + +L+DMY KC LS A++IF + ++S+TS+I + + ++ LF
Sbjct: 267 YESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKC 356
+M + I P+ V L VL AC++ G ++ G ++ ++ + D T +VDM +
Sbjct: 327 EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 357 GCIERALQ---TFNEMPCKNIFTWNALLNGLAMHGR 389
G ++ A + T + W ALL+ +HGR
Sbjct: 387 GRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
S N +H L K N L+ YVK + ++ A+++F E+ + ++VSWTS
Sbjct: 41 ESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTS 100
Query: 279 IISGLVQCQRPKESLVLFRKMHSS-GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
+ISG +P+ +L +F+KMH + P+ SV AC+ + + G+ +H ++
Sbjct: 101 VISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS 160
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEM--PCKNIFTWNALLNGLAMHGRGYAALK 395
++R+I + +++VDMY KC +E A + F+ M +N+ +W +++ A + RG+ A++
Sbjct: 161 GLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIE 220
Query: 396 FFEEMVGEGST--PNEVTFLAILTACCHSGLVDKGR 429
F ++ N+ ++++AC G + G+
Sbjct: 221 LFRSFNAALTSDRANQFMLASVISACSSLGRLQWGK 256
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 183/291 (62%), Gaps = 4/291 (1%)
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDMYVKCECLSE 260
++ P+ TF L+V C ++ +G++IH + K +S ++ +YV+ + L +
Sbjct: 8 DIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLD 67
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A+++F E+P+ D+V W +++G V+C E L +FR+M G+EPD +T+ L+ACA
Sbjct: 68 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 127
Query: 321 VGDLDYGRWVHEYIDRRA-IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
VG L G+W+HE++ +++ I+ D+ +GTA+VDMYAKCGCIE A++ F ++ +N+F+W A
Sbjct: 128 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 187
Query: 380 LLNGLAMHGRGYAALKFFEEMVGE-GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
L+ G A +G A+ E + E G P+ V L +L AC H G +++GR M
Sbjct: 188 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM-EA 246
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+Y ++P+ EHY C+ DL+CRAG LD+AL L+ MPM P + GALL+ C+
Sbjct: 247 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 297
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 156/291 (53%), Gaps = 12/291 (4%)
Query: 107 PDSYTFPAMLKSC--AMFLGIGEGMQIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSA 163
P TF ++ +C A F +G+ QIH V+K G+ + D +VQ ++ +Y A
Sbjct: 11 PSYLTFHFLIVACLKACFFSVGK--QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDA 68
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRS 220
KVFDE+P DVV W ++ GY R GL E + +F M +EP+ + + L C +
Sbjct: 69 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 128
Query: 221 GNLRMGRRIHGLIFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
G L G+ IH + K++ + + AL+DMY KC C+ A ++F +L ++++ SW ++
Sbjct: 129 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 188
Query: 280 ISGLVQCQRPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR- 337
I G K+++ ++ GI+PD V+L VL+ACA+ G L+ GR + E ++ R
Sbjct: 189 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARY 248
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT-WNALLNGLAMH 387
I + +VD+ + G ++ AL +MP K + + W ALLNG H
Sbjct: 249 EITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 14/267 (5%)
Query: 26 KKIHAQLVTSGIVRNDLVVKR-VVDFFGKSVDFVDFGCGF--LKQCDWRVSSFPFNSLIS 82
K+IH +V +G+ +D V+ V+ + + +D F + Q D N +
Sbjct: 33 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 92
Query: 83 SYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV- 141
GS+ ++ +R+++ G PD ++ L +CA + +G IH V K +
Sbjct: 93 CGLGSEGLEV----FREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 148
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
D++V +LV +Y C +A +VF ++ R+V SW ++I GYA G +A+T +
Sbjct: 149 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 208
Query: 202 N----VEPNTATFVSLLVGCGRSGNLRMGRR-IHGLIFKRASKVSLEASNALMDMYVKCE 256
++P++ + +L C G L GR + + + E + ++D+ +
Sbjct: 209 EREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAG 268
Query: 257 CLSEAKQIFHELPKKDIVS-WTSIISG 282
L +A + ++P K + S W ++++G
Sbjct: 269 RLDDALNLIEKMPMKPLASVWGALLNG 295
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 240/490 (48%), Gaps = 78/490 (15%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NS++ + + A+ YR + + G D Y P +L++C G H VI
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
++GL +L+V N L+ LY A +F EMPVR+ +SW +I G+++ + AV
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 197 MFLSMNVE---PNTATFVSLLV---GCGR-------------SGN--------------- 222
+F M E P+ T+ S+L CG+ SGN
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 223 ----LRMGRRIHGLI-------------------------------FKRASKVSLEASNA 247
L + ++HG + F++ +E+ N+
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 248 LMDMYVKCECLSEAKQIFHELP--------KKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
L+ +V L EA +F EL K ++V+WTS+I G R +SL FR+M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
S + + V + +LS CA + L+ GR +H ++ R ++ +I + A+V+MYAKCG +
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
F + K++ +WN+++ G MHG AL F+ M+ G P+ + +A+L+AC
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVL 479
H+GLV+KGR+ F M S+++ L P+ EHY C+ DLL R G L EA +V+ MPM P V
Sbjct: 546 SHAGLVEKGREIFYSM-SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVC 604
Query: 480 ILGALLSACK 489
+LGALL++C+
Sbjct: 605 VLGALLNSCR 614
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 7/193 (3%)
Query: 248 LMDMYVKCECLSEAKQIFHELPK---KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
L+ +Y + L +A+ +F + D+ W SI+ V + +L L+R M G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
DG IL +L AC +G R H + + +K ++H+ ++ +Y K G + A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 365 TFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS-- 422
F EMP +N +WN ++ G + +A+K FE M E P+EVT+ ++L+ CHS
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS--CHSQC 272
Query: 423 GLVDKGRKYFNQM 435
G + KYF+ M
Sbjct: 273 GKFEDVLKYFHLM 285
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 218/382 (57%), Gaps = 14/382 (3%)
Query: 130 QIHGIVIKMGLVCDLYVQN---SLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
QIH ++++ L+ + V + S + L + D + +VF + + ++I ++
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 187 RAGLFDEAVTMFLSMN------VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
+ E +F S+ P +++F L C +SG+L G +IHG IF
Sbjct: 89 LSQTPCEGFRLFRSLRRNSSLPANPLSSSFA--LKCCIKSGDLLGGLQIHGKIFSDGFLS 146
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
LMD+Y CE ++A ++F E+PK+D VSW + S ++ +R ++ LVLF KM
Sbjct: 147 DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 301 SSG---IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
+ ++PDGV L ACAN+G LD+G+ VH++ID + +++ +V MY++CG
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCG 266
Query: 358 CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
+++A Q F M +N+ +W AL++GLAM+G G A++ F EM+ G +P E T +L+
Sbjct: 267 SMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLS 326
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
AC HSGLV +G +F++M S ++ + P L HYGC+ DLL RA LLD+A L+++M M PD
Sbjct: 327 ACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPD 386
Query: 478 VLILGALLSACKDKGILKLPTR 499
I LL AC+ G ++L R
Sbjct: 387 STIWRTLLGACRVHGDVELGER 408
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 19/379 (5%)
Query: 25 FKKIHAQLVTSGIVRNDLVVKRVVDFFGKSV--DFVDFGCGFLKQCDWRVSSFPFNSLIS 82
++IHA L+ + ++RN V + S+ +++ C Q + N++I
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQ-RLNPTLSHCNTMIR 85
Query: 83 SYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
+++ S P +R + RN LP + + LK C + G+QIHG + G +
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
D + +L+ LY C++ A KVFDE+P RD VSW + + Y R + + +F M
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 202 N------VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC 255
V+P+ T + L C G L G+++H I + +L SN L+ MY +C
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRC 265
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
+ +A Q+F+ + ++++VSWT++ISGL KE++ F +M GI P+ LT +L
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLL 325
Query: 316 SACANVGDLDYGRWVHEYIDRR-----AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
SAC++ G + G + DR IK ++H +VD+ + +++A M
Sbjct: 326 SACSHSGLVAEGMM---FFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 371 CKNIFT-WNALLNGLAMHG 388
K T W LL +HG
Sbjct: 383 MKPDSTIWRTLLGACRVHG 401
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 178/273 (65%), Gaps = 2/273 (0%)
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
++R+G IH ++ + + N+L+ +Y C ++ A ++F ++P+KD+V+W S+I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
+G + +P+E+L L+ +M+S GI+PDG + S+LSACA +G L G+ VH Y+ + +
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM 400
R++H ++D+YA+CG +E A F+EM KN +W +L+ GLA++G G A++ F+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 401 VG-EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
EG P E+TF+ IL AC H G+V +G +YF +M ++Y + PR+EH+GCM DLL RA
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLARA 240
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
G + +A +++MPM P+V+I LL AC G
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 156/271 (57%), Gaps = 14/271 (5%)
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
G IH +VI+ G +YVQNSL+HLY C D SA KVFD+MP +D+V+W S+I G+A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 188 AGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA 244
G +EA+ ++ MN ++P+ T VSLL C + G L +G+R+H + K +L +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS-G 303
SN L+D+Y +C + EAK +F E+ K+ VSWTS+I GL KE++ LF+ M S+ G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI-----HIGTAMVDMYAKCGC 358
+ P + +L AC++ G + G EY R + I H G MVD+ A+ G
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFG-CMVDLLARAGQ 242
Query: 359 IERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
+++A + MP + N+ W LL +HG
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 24/257 (9%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NS+I+ +A + +P+ A+ Y ++ G PD +T ++L +CA + G ++H +I
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K+GL +L+ N L+ LY C A +FDEM ++ VSWTS+I G A G EA+
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 197 MFLSMNVE----PNTATFVSLLVGCGRSGNLRMG----RRIHGLIFKRASKVS--LEASN 246
+F M P TFV +L C G ++ G RR+ + K+ +E
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-----REEYKIEPRIEHFG 231
Query: 247 ALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKES-LVLFRKMHSSGI 304
++D+ + + +A + +P + ++V W +++ C +S L F ++ +
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA---CTVHGDSDLAEFARIQILQL 288
Query: 305 EP----DGVILTSVLSA 317
EP D V+L+++ ++
Sbjct: 289 EPNHSGDYVLLSNMYAS 305
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
+ D+ G +H + R I++ +++ +YA CG + A + F++MP K++ WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
+NG A +G+ AL + EM +G P+ T +++L+AC G + G++ MI +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI--KV 118
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
L+ L + DL R G ++EA L M
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 223/426 (52%), Gaps = 42/426 (9%)
Query: 111 TFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM 170
T ++L+SC I IH +I+ D +V L+ + D A VF +
Sbjct: 77 TLISVLRSCK---NIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 133
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGR 227
+V +T++I G+ +G + V+++ M +V P+ S+L C +L++ R
Sbjct: 134 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCR 189
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK----------------- 270
IH + K S +M++Y K L AK++F E+P
Sbjct: 190 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 249
Query: 271 --------------KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
KD V WT++I GLV+ + ++L LFR+M + + VLS
Sbjct: 250 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 309
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT 376
AC+++G L+ GRWVH +++ + ++ +G A+++MY++CG I A + F M K++ +
Sbjct: 310 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 369
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
+N +++GLAMHG A+ F +MV G PN+VT +A+L AC H GL+D G + FN M
Sbjct: 370 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM- 428
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ +N+ P++EHYGC+ DLL R G L+EA + +P+ PD ++LG LLSACK G ++L
Sbjct: 429 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 488
Query: 497 PTRYTR 502
+ +
Sbjct: 489 GEKIAK 494
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 213/456 (46%), Gaps = 43/456 (9%)
Query: 4 IRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCG 63
+RL+ + L+ +R C N+ IHA+++ + ++ VV ++ ++D VD+
Sbjct: 70 LRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRV-CSTLDSVDYAYD 128
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
+ + + ++I + S R + Y +++ N LPD+Y ++LK+C + +
Sbjct: 129 VFSYVS-NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKV 187
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP------------ 171
+IH V+K+G V ++ +YG + +A K+FDEMP
Sbjct: 188 ----CREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 243
Query: 172 -------------------VRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTAT 209
++D V WT++I G R ++A+ +F M NV N T
Sbjct: 244 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 303
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
V +L C G L +GR +H + + ++S NAL++MY +C ++EA+++F +
Sbjct: 304 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 363
Query: 270 KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
KD++S+ ++ISGL E++ FR M + G P+ V L ++L+AC++ G LD G
Sbjct: 364 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 423
Query: 330 VHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMH 387
V + R ++ I +VD+ + G +E A + +P + + LL+ +H
Sbjct: 424 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 483
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
G K + + E P+ T++ + SG
Sbjct: 484 GNMELGEKIAKRLF-ESENPDSGTYVLLSNLYASSG 518
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 221/399 (55%), Gaps = 4/399 (1%)
Query: 101 VRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDC 160
+R F T+ A++++C I +++G ++ G + Y+ N ++ ++ C
Sbjct: 115 IRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI 174
Query: 161 RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPN---TATFVSLLVGC 217
A ++FDE+P R++ S+ SII+G+ G + EA +F M E + T TF +L
Sbjct: 175 IDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRAS 234
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
G++ +G+++H K + S L+DMY KC + +A+ F +P+K V+W
Sbjct: 235 AGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWN 294
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
++I+G +E+L L M SG+ D L+ ++ + L+ + H + R
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+ +I TA+VD Y+K G ++ A F+++P KNI +WNAL+ G A HGRG A+K F
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
E+M+ PN VTFLA+L+AC +SGL ++G + F M S+ + + PR HY CM +LL
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM-SEVHGIKPRAMHYACMIELLG 473
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
R GLLDEA+ +R P+ V + ALL+AC+ + L+L
Sbjct: 474 RDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K++H + G+V N V ++D + K D D C F +C ++ +N++I+ YA
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF--ECMPEKTTVAWNNVIAGYA 301
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ A+ + +G D +T M++ + Q H +I+ G ++
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---N 202
+LV Y +A VFD++P ++++SW +++ GYA G +AV +F M N
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 203 VEPNTATFVSLLVGCGRSGNLRMG-------RRIHGL---IFKRASKVSLEASNALMDMY 252
V PN TF+++L C SG G +HG+ A + L + L+D
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD-- 479
Query: 253 VKCECLSEAKQIFHELPKKDIVS-WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
EA P K V+ W ++++ + + V+ K++ G E G
Sbjct: 480 -------EAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 196/348 (56%), Gaps = 7/348 (2%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN 202
D + N ++ Y + A FD MP +D SW ++I GYAR G ++A +F SM
Sbjct: 37 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM- 95
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+E N ++ +++ G G+L FK A + A A++ Y+K + + A+
Sbjct: 96 MEKNEVSWNAMISGYIECGDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKKVELAE 151
Query: 263 QIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
+F ++ K++V+W ++ISG V+ RP++ L LFR M GI P+ L+S L C+ +
Sbjct: 152 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 211
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
L GR +H+ + + + D+ T+++ MY KCG + A + F M K++ WNA++
Sbjct: 212 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 271
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
+G A HG AL F EM+ P+ +TF+A+L AC H+GLV+ G YF M+ + Y
Sbjct: 272 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV-RDYK 330
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ P+ +HY CM DLL RAG L+EAL L+R+MP P + G LL AC+
Sbjct: 331 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 378
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N++IS Y + RP+ + +R ++ G P+S + L C+ + G QIH IV
Sbjct: 166 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 225
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K L D+ SL+ +Y C + A K+F+ M +DVV+W ++I+GYA+ G D+A+
Sbjct: 226 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 285
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMG 226
+F M + P+ TFV++L+ C +G + +G
Sbjct: 286 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 318
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 48/330 (14%)
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
NT T+ SLL+G + + M H L F + + N ++ YV+ +A+ F
Sbjct: 5 NTITWNSLLIGISKDPSRMM--EAHQL-FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFF 61
Query: 266 HELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD 325
+P KD SW ++I+G + +++ LF M +E + V +++S GDL+
Sbjct: 62 DRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLE 117
Query: 326 YGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNIFTWNALLNGL 384
+ + A R + TAM+ Y K +E A F +M KN+ TWNA+++G
Sbjct: 118 KA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 173
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSP 444
+ R LK F M+ EG PN + L C + GR+ +Q++S+ L
Sbjct: 174 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ-IHQIVSKS-TLCN 231
Query: 445 RLEHYGCMTDLLCRAGLL-------------------------------DEALMLVRTM- 472
+ + + C+ G L D+AL L R M
Sbjct: 232 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 291
Query: 473 --PMAPDVLILGALLSACKDKGILKLPTRY 500
+ PD + A+L AC G++ + Y
Sbjct: 292 DNKIRPDWITFVAVLLACNHAGLVNIGMAY 321
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 193/341 (56%), Gaps = 6/341 (1%)
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN----VEPNTATFVSLLVGCGRSG 221
VF MP R++ SW II ++R+G +++ +FL M V P+ T +L C S
Sbjct: 70 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 129
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
+ G IH L K SL S+AL+ MYV L A+++F ++P +D V +T++
Sbjct: 130 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 189
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G VQ L +FR+M SG D V++ S+L AC +G L +G+ VH + RR
Sbjct: 190 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 249
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
+++G A+ DMY KC ++ A F M +++ +W++L+ G + G + K F+EM+
Sbjct: 250 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 309
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
EG PN VTFL +L+AC H GLV+K YF M Q+YN+ P L+HY + D + RAGL
Sbjct: 310 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM--QEYNIVPELKHYASVADCMSRAGL 367
Query: 462 LDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
L+EA + MP+ PD ++GA+LS CK G +++ R R
Sbjct: 368 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAR 408
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 190/407 (46%), Gaps = 51/407 (12%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQIHG 133
F +N +I ++ S +I + ++ R + PD +T P +L++C+ G IH
Sbjct: 80 FSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHV 139
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+ +K+G L+V ++LV +Y A K+FD+MPVRD V +T++ GY + G
Sbjct: 140 LCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAML 199
Query: 194 AVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
+ MF M ++ VSLL+ CG+ G L+ G+ +HG +R S + L NA+ D
Sbjct: 200 GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 259
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MYVKC L A +F + ++D++SW+S+I G S LF +M GIEP+ V
Sbjct: 260 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 319
Query: 311 LTSVLSACANVGDLD----YGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
VLSACA+ G ++ Y R + EY I ++ ++ D ++ G +E A +
Sbjct: 320 FLGVLSACAHGGLVEKSWLYFRLMQEY----NIVPELKHYASVADCMSRAGLLEEAEKFL 375
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
+MP K P+E A+L+ C G V+
Sbjct: 376 EDMPVK----------------------------------PDEAVMGAVLSGCKVYGNVE 401
Query: 427 KGRKYFNQMISQQYNLSPR-LEHYGCMTDLLCRAGLLDEALMLVRTM 472
G + ++I L PR +Y + L AG DEA L + M
Sbjct: 402 VGERVARELI----QLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 444
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 224/422 (53%), Gaps = 5/422 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NSL++S+ R A+ ++ +G + TF + L +C +G +HG+V+
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
GL + + N+LV +YG + + +V +MP RDVV+W ++I GYA D+A+
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449
Query: 197 MFLSMNVE---PNTATFVSLLVGCGRSGNL-RMGRRIHGLIFKRASKVSLEASNALMDMY 252
F +M VE N T VS+L C G+L G+ +H I + N+L+ MY
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
KC LS ++ +F+ L ++I++W ++++ +E L L KM S G+ D +
Sbjct: 510 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
LSA A + L+ G+ +H + + D I A DMY+KCG I ++ +
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 629
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
++ +WN L++ L HG F EM+ G P VTF+++LTAC H GLVDKG Y+
Sbjct: 630 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 689
Query: 433 NQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+ MI++ + L P +EH C+ DLL R+G L EA + MPM P+ L+ +LL++CK G
Sbjct: 690 D-MIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
Query: 493 IL 494
L
Sbjct: 749 NL 750
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 232/484 (47%), Gaps = 19/484 (3%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCG---FLKQCDWRVSSFPFNSLISS 83
++H + SG++ + V ++ +G + C F + D V S+ SL+
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGV---YGLVSCSRKVFEEMPDRNVVSW--TSLMVG 134
Query: 84 YAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
Y+ P+ I Y+ + G + + ++ SC + G QI G V+K GL
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM-- 201
L V+NSL+ + G + A +FD+M RD +SW SI A YA+ G +E+ +F M
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 202 -NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
+ E N+ T +LL G + + GR IHGL+ K + N L+ MY E
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A +F ++P KD++SW S+++ V R ++L L M SSG + V TS L+AC
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
+ GR +H + + + IG A+V MY K G + + + +MP +++ WNAL
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG-LVDKGRKYFNQMISQQ 439
+ G A AL F+ M EG + N +T +++L+AC G L+++G+ ++S
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG----ILK 495
+ +++ + + + G L + L + +++ A+L+A G +LK
Sbjct: 495 FESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLK 551
Query: 496 LPTR 499
L ++
Sbjct: 552 LVSK 555
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 199/423 (47%), Gaps = 36/423 (8%)
Query: 97 YRQIVRNGFLPDSYTFPAMLKSC----AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
+R++ G P S+ +++ +C +MF EG+Q+HG V K GL+ D+YV +++H
Sbjct: 46 FRKMCDLGIKPSSFVIASLVTACGRSGSMFR---EGVQVHGFVAKSGLLSDVYVSTAILH 102
Query: 153 LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTAT 209
LYGV + KVF+EMP R+VVSWTS++ GY+ G +E + ++ M E N +
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
++ CG + +GR+I G + K + L N+L+ M + A IF ++
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 270 KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
++D +SW SI + Q +ES +F M E + ++++LS +V +GR
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR 389
+H + + + + ++ MYA G A F +MP K++ +WN+L+ GR
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR----------KYFNQMISQQ 439
AL M+ G + N VTF + L AC +KGR ++NQ+I
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN- 401
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP----MAPDVLILGALLSACKDKGILK 495
+ + + G + E+ ++ MP +A + LI G DK +
Sbjct: 402 -----------ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 496 LPT 498
T
Sbjct: 451 FQT 453
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 168/340 (49%), Gaps = 15/340 (4%)
Query: 161 RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGC 217
+ A +FD MPVR+ VSW ++++G R GL+ E + F M ++P++ SL+ C
Sbjct: 9 KPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC 68
Query: 218 GRSGNL-RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
GRSG++ R G ++HG + K + S A++ +Y +S ++++F E+P +++VSW
Sbjct: 69 GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSW 128
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
TS++ G P+E + +++ M G+ + ++ V+S+C + D GR + + +
Sbjct: 129 TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVK 188
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
++ + + +++ M G ++ A F++M ++ +WN++ A +G + +
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
F M N T +L+ H GR ++ + + C+ + L
Sbjct: 249 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF------DSVVCVCNTL 302
Query: 457 CR----AGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
R AG EA ++ + MP D++ +L+++ + G
Sbjct: 303 LRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDG 341
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY K + A+ +F +P ++ VSW +++SG+V+ E + FRKM GI+P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 311 LTSVLSACANVGDL-DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
+ S+++AC G + G VH ++ + + D+++ TA++ +Y G + + + F EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
P +N+ +W +L+ G + G + ++ M GEG NE + ++++C GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
+ Q++ + L +L + +L G +D A
Sbjct: 181 QIIGQVV--KSGLESKLAVENSLISMLGSMGNVDYA 214
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 247/472 (52%), Gaps = 37/472 (7%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGS 87
+HA LVTSGI R + ++V F+ + +D F + +S +I + A +
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV--MIGACARN 95
Query: 88 DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQ 147
Q ++ +R++ ++G D++ P++LK+ L G IH +V+K D ++
Sbjct: 96 GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIV 155
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VE 204
+SL+ +Y + +A KVF ++ +D+V + ++I+GYA DEA+ + M ++
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ T+ +L+ G N KVS +D Y
Sbjct: 216 PDVITWNALISGFSHMRN--------------EEKVSEILELMCLDGY------------ 249
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
K D+VSWTSIISGLV + +++ F++M + G+ P+ + ++L AC + +
Sbjct: 250 -----KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
+G+ +H Y ++ + +A++DMY KCG I A+ F + P K T+N+++
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCY 364
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSP 444
A HG A++ F++M G + +TF AILTAC H+GL D G+ F ++ +Y + P
Sbjct: 365 ANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVP 423
Query: 445 RLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
RLEHY CM DLL RAG L EA +++ M M PD+ + GALL+AC++ G ++L
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMEL 475
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 116/214 (54%)
Query: 208 ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
++V L+ GR GR +H + + L+ YV+C + +A+++F E
Sbjct: 17 GSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE 76
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+PK+DI +I + +ESL FR+M+ G++ D I+ S+L A N+ D ++G
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
+ +H + + + + D I ++++DMY+K G + A + F+++ +++ +NA+++G A +
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
+ AL ++M G P+ +T+ A+++ H
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 16/256 (6%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ S+IS + + + A ++Q++ +G P+S T +L +C + G +IHG +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
GL +V+++L+ +YG C A +F + P + V++ S+I YA GL D+AV
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVE 375
Query: 197 MFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDMY 252
+F M + + TF ++L C +G +G+ + L+ + V LE ++D+
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435
Query: 253 VKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKE-SLVLFRKMHSSGIEPD--- 307
+ L EA ++ + + D+ W ++ L C+ L H + +EP+
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGAL---LAACRNHGNMELARIAAKHLAELEPENSG 492
Query: 308 -GVILTSVLSACANVG 322
G++LTS+ AN G
Sbjct: 493 NGLLLTSLY---ANAG 505
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 215/385 (55%), Gaps = 4/385 (1%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
P+ + + KSC+ I EG Q HG +K GL+ +V+N+LV++Y +C A +V
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNL 223
D++P D+ ++S ++GY G F E + + E N T++S L +L
Sbjct: 194 LDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL 253
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
+ ++H + + +EA AL++MY KC + A+++F + ++I T+I+
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
Q + +E+L LF KM + + P+ +L++ A + L G +H + + + +
Sbjct: 314 FQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV 373
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+G A+V+MYAK G IE A + F+ M ++I TWN +++G + HG G AL+ F+ M+
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G PN +TF+ +L AC H G V++G YFNQ++ +++++ P ++HY C+ LL +AG+
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM-KKFDVQPDIQHYTCIVGLLSKAGMFK 492
Query: 464 EALMLVRTMPMAPDVLILGALLSAC 488
+A +RT P+ DV+ LL+AC
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLLNAC 517
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 177/387 (45%), Gaps = 12/387 (3%)
Query: 115 MLKSCA--MFLGIGEGMQIHGIVIKMGLVC-DLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
+LK CA +L IGE + H IV D Y NSL++LY C + A K+FD MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 172 VRDVVSWTSIIAGYARAGLFDEAV-----TMFLSMNVEPNTATFVSLLVGCGRSGNLRMG 226
R+VVSW +++ GY +G FD V +MF S PN + C SG + G
Sbjct: 97 ERNVVSWCAMMKGYQNSG-FDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC 286
++ HG K N L+ MY C EA ++ +LP D+ ++S +SG ++C
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
KE L + RK + + + S L +N+ DL+ VH + R ++
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
A+++MY KCG + A + F++ +NIF +++ AL F +M +
Sbjct: 276 GALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP 335
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
PNE TF +L + L+ +G ++ Y + + + ++ ++G +++A
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIEDAR 393
Query: 467 MLVRTMPMAPDVLILGALLSACKDKGI 493
M D++ ++S C G+
Sbjct: 394 KAFSGMTFR-DIVTWNTMISGCSHHGL 419
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 185/382 (48%), Gaps = 22/382 (5%)
Query: 16 IRRCNN---LKSFKKIHAQLVTSGIVRNDLVVKRVVDFF------GKSVDFVDFGCGFLK 66
+ C+N ++ K+ H + G++ ++ V +V + G+++ +D L
Sbjct: 143 FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD----LP 198
Query: 67 QCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG 126
CD V F+S +S Y + + R+ F+ ++ T+ + L+ + +
Sbjct: 199 YCDLSV----FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLN 254
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+Q+H +++ G ++ +L+++YG C A +VFD+ +++ T+I+ Y
Sbjct: 255 LALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Query: 187 RAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ F+EA+ +F M+ V PN TF LL L+ G +HGL+ K + +
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
NAL++MY K + +A++ F + +DIV+W ++ISG +E+L F +M +G
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 304 IEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
P+ + VL AC+++G ++ G + ++ + + ++ DI T +V + +K G + A
Sbjct: 435 EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Query: 363 LQTFNEMPCK-NIFTWNALLNG 383
P + ++ W LLN
Sbjct: 495 EDFMRTAPIEWDVVAWRTLLNA 516
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 209/377 (55%), Gaps = 39/377 (10%)
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP 205
V +SL+ +YG C SA KVFDEMP R+V +W ++I GY G A +F ++V
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA--SKVSLEASNALMDMYVKCECLSEAKQ 263
NT T++ ++ G G+ + R + F+R +++A + ++ +YV + +A++
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKAREL----FERMPFELKNVKAWSVMLGVYVNNRKMEDARK 117
Query: 264 IFHELPKK-------------------------------DIVSWTSIISGLVQCQRPKES 292
F ++P+K D+V W ++I+G Q ++
Sbjct: 118 FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 177
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
+ F M G EPD V ++S+LSACA G LD GR VH I+ R I+ + + A++DM
Sbjct: 178 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 237
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
YAKCG +E A F + +++ N++++ LA+HG+G AL+ F M P+E+TF
Sbjct: 238 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 297
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+A+LTAC H G + +G K F++M +Q ++ P ++H+GC+ LL R+G L EA LV+ M
Sbjct: 298 IAVLTACVHGGFLMEGLKIFSEMKTQ--DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 355
Query: 473 PMAPDVLILGALLSACK 489
+ P+ +LGALL ACK
Sbjct: 356 HVKPNDTVLGALLGACK 372
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLV 215
D A +F + RD+V W ++IAGYA+ G D+A+ F +M EP+ T S+L
Sbjct: 142 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 201
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVS 275
C +SG L +GR +H LI R +++ SNAL+DMY KC L A +F + + +
Sbjct: 202 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 261
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
S+IS L + KE+L +F M S ++PD + +VL+AC + G L G + +
Sbjct: 262 CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK 321
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAAL 394
+ +K ++ ++ + + G ++ A + EM K N ALL +H A
Sbjct: 322 TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE 381
Query: 395 KFFEEMVGEGSTPN 408
+ + + GS N
Sbjct: 382 QVMKIIETAGSITN 395
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 45/266 (16%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N+LI+ YA + AI + + G+ PD+ T ++L +CA + G ++H ++
Sbjct: 161 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 220
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
G+ + +V N+L+ +Y C D +A VF+ + VR V S+I+ A G EA+
Sbjct: 221 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 280
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
MF +M +++P+ TF+++L C +HG
Sbjct: 281 MFSTMESLDLKPDEITFIAVLTAC-----------VHGGF-------------------- 309
Query: 254 KCECLSEAKQIFHELPKKD----IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
L E +IF E+ +D + + +I L + + KE+ L ++MH ++P+
Sbjct: 310 ----LMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDT 362
Query: 310 ILTSVLSACANVGDLDYGRWVHEYID 335
+L ++L AC D + V + I+
Sbjct: 363 VLGALLGACKVHMDTEMAEQVMKIIE 388
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 243/483 (50%), Gaps = 17/483 (3%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL + +C + + +H SG+ + V ++ F+ K + F + D
Sbjct: 47 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD-- 104
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
S+ +N++I +Y+ S + AI ++ + T +L + +
Sbjct: 105 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV------SHEPL 158
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H +V+K G+V D+ V SLV Y C SA +++ +V TSI++ YA G
Sbjct: 159 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 218
Query: 192 DEAVTMF-----LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
D AV F L M ++ V +L GC +S ++ +G +HG K N
Sbjct: 219 DIAVVYFSKTRQLCMKIDA--VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 276
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH-SSGIE 305
L+ MY K + + +F +L + ++SW S+ISG VQ R + +F +M + G+
Sbjct: 277 GLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLL 336
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
PD + + S+L+ C+ + L+ G+ +H Y R + + + TA++DMYAKCG +A
Sbjct: 337 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 396
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F + TWN++++G ++ G + AL + EM +G P+E+TFL +L+AC H G V
Sbjct: 397 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 456
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
D+G+ F MI +++ +SP L+HY M LL RA L EAL L+ M + PD + GALL
Sbjct: 457 DEGKICFRAMI-KEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 515
Query: 486 SAC 488
SAC
Sbjct: 516 SAC 518
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 174/358 (48%), Gaps = 10/358 (2%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N+LI Y+ + A + +++ GF P + T +L C + +G +HG+
Sbjct: 9 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K GL D V+N+L+ Y C + SA +F EM + VSW ++I Y+++GL +EA+T
Sbjct: 69 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+F +M NVE + T ++LL S ++ +H L+ K + +L+ Y
Sbjct: 129 VFKNMFEKNVEISPVTIINLL-----SAHVSH-EPLHCLVVKCGMVNDISVVTSLVCAYS 182
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
+C CL A++++ + IV TSI+S + ++V F K ++ D V L
Sbjct: 183 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 242
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN 373
+L C +D G +H Y + + + ++ MY+K +E L F ++
Sbjct: 243 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 302
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRK 430
+ +WN++++G GR A + F +M+ G P+ +T ++L C ++ G++
Sbjct: 303 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 9/262 (3%)
Query: 170 MPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMG 226
MP RD V W ++I GY+R G +A +F+ M P+ T V+LL CG+ G + G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQC 286
R +HG+ K ++ + NAL+ Y KC L A+ +F E+ K VSW ++I Q
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
+E++ +F+ M +E V + ++LSA + L H + + + DI +
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVV 174
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
T++V Y++CGC+ A + + +I ++++ A G A+ +F +
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234
Query: 407 PNEVTFLAILTACCHSGLVDKG 428
+ V + IL C S +D G
Sbjct: 235 IDAVALVGILHGCKKSSHIDIG 256
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 193/342 (56%), Gaps = 6/342 (1%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE-----PNTATFVSLLVGC 217
A K+FDEMP RD+VSW S+I+GY+ G + + M + PN TF+S++ C
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
G+ GR IHGL+ K ++ NA ++ Y K L+ + ++F +L K++VSW
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
++I +Q ++ L F G EPD +VL +C ++G + + +H I
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+ I TA++D+Y+K G +E + F+E+ + W A+L A HG G A+K F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
E MV G +P+ VTF +L AC HSGLV++G+ YF M S++Y + PRL+HY CM DLL
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM-SKRYRIDPRLDHYSCMVDLLG 383
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
R+GLL +A L++ MPM P + GALL AC+ +L T+
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 170/312 (54%), Gaps = 7/312 (2%)
Query: 77 FNSLISSYAGSDR--PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+NSLIS Y+G +L I GF P+ TF +M+ +C EG IHG+
Sbjct: 100 WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGL 159
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
V+K G++ ++ V N+ ++ YG D S+ K+F+++ ++++VSW ++I + + GL ++
Sbjct: 160 VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG 219
Query: 195 VTMF-LSMNV--EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ F +S V EP+ ATF+++L C G +R+ + IHGLI + + AL+D+
Sbjct: 220 LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDL 279
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y K L ++ +FHE+ D ++WT++++ ++++ F M GI PD V
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTF 339
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
T +L+AC++ G ++ G+ E + +R I + + MVD+ + G ++ A EMP
Sbjct: 340 THLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
Query: 371 CK-NIFTWNALL 381
+ + W ALL
Sbjct: 400 MEPSSGVWGALL 411
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 40/224 (17%)
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
++S+++A + ++ R +H + + R IG +V Y + G A + F+EMP
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFE----EMVGE-GSTPNEVTFLAILTACCHSGLV 425
+++ +WN+L++G + GRGY K FE M+ E G PNEVTFL++++AC + G
Sbjct: 94 ERDLVSWNSLISGYS--GRGYLG-KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 426 DKGR---------------KYFNQMISQQ-------------YNLSPR-LEHYGCMTDLL 456
++GR K N I+ +LS + L + M +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 457 CRAGLLDEALM---LVRTMPMAPDVLILGALLSACKDKGILKLP 497
+ GL ++ L + R + PD A+L +C+D G+++L
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 255/508 (50%), Gaps = 43/508 (8%)
Query: 15 YIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVDFVDFGCGFLKQCDWRV 72
+++RC L+ K++HAQLV + + ++ F K S + V + LK +
Sbjct: 278 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGH- 336
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
SF + L+ + + + + Y + +G P S+ ++L++C + +G IH
Sbjct: 337 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 396
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
+K GL +YVQ LV LY A K FD++ ++ VSW S++ GY +G D
Sbjct: 397 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 456
Query: 193 EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
EA +F + E + ++ ++ + G+ MG +F S + N L+ Y
Sbjct: 457 EARRVFDKI-PEKDAVSWNLIISSYAKKGD--MGNACS--LFSAMPLKSPASWNILIGGY 511
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLV---------------------------- 284
V C + A+ F +P+K+ VSW ++ISG
Sbjct: 512 VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIA 571
Query: 285 ---QCQRPKESLVLFRKM--HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
Q +PK++L LF +M +S I+PD + L+SV+SA + +G+ +G WV YI I
Sbjct: 572 CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI 631
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
K D + T+++D+Y K G +A + F+ + K+ +++A++ G ++G A F
Sbjct: 632 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 691
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M+ + PN VTF +L+A HSGLV +G K FN M + +NL P +HYG M D+L RA
Sbjct: 692 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM--KDHNLEPSADHYGIMVDMLGRA 749
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSA 487
G L+EA L+++MPM P+ + GALL A
Sbjct: 750 GRLEEAYELIKSMPMQPNAGVWGALLLA 777
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 247/477 (51%), Gaps = 10/477 (2%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGS 87
IH +T+G N + ++D + K D F + V S+ ++IS ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWT--AMISRFSRC 91
Query: 88 DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQ 147
A+L ++++ R + +T+ ++LKSC + EGMQIHG V K +L V+
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--- 204
++L+ LY C A FD M RD+VSW ++I GY D + ++F M E
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ TF SLL L + +HGL K S +L++ YVKC L+ A ++
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 265 FHELPKKDIVSWTSIISGLVQCQR-PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
K+D++S T++I+G Q ++ +F+ M + D V+++S+L C +
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 324 LDYGRWVHEY-IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
+ GR +H + + I+ D+ +G +++DMYAK G IE A+ F EM K++ +W +L+
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
G HG A+ + M E PN+VTFL++L+AC H+G + G K ++ MI+ ++ +
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMIN-KHGI 450
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMP--MAPDVLILGALLSACKDKGILKLP 497
R EH C+ D+L R+G L+EA L+R+ ++ GA L AC+ G ++L
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLS 507
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 198/323 (61%), Gaps = 5/323 (1%)
Query: 178 WTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
+ ++I GY F+EA+ + M EP+ T+ LL C R ++R G++IHG +F
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 235 KRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
K + + N+L++MY +C + + +F +L K SW+S++S E L+
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 295 LFRKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
LFR M S + ++ + + S L ACAN G L+ G +H ++ R + +I + T++VDMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
KCGC+++AL F +M +N T++A+++GLA+HG G +AL+ F +M+ EG P+ V ++
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 414 AILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
++L AC HSGLV +GR+ F +M+ ++ + P EHYGC+ DLL RAGLL+EAL ++++P
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEML-KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 474 MAPDVLILGALLSACKDKGILKL 496
+ + +I LS C+ + ++L
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIEL 421
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 208/378 (55%), Gaps = 14/378 (3%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSV-----DFVDFGCGFLKQCDW 70
++RC+N+ FK++HA+ + + + V K + +++ + D
Sbjct: 37 LKRCHNIDEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAASIFRGID- 93
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+F FN++I Y + A+ Y ++++ G PD++T+P +LK+C I EG Q
Sbjct: 94 DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQ 153
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
IHG V K+GL D++VQNSL+++YG C + + VF+++ + SW+S+++ A G+
Sbjct: 154 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 213
Query: 191 FDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+ E + +F M N++ + VS L+ C +G L +G IHG + + S++++
Sbjct: 214 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 273
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+DMYVKC CL +A IF ++ K++ ++++++ISGL + +L +F KM G+EP
Sbjct: 274 SLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333
Query: 307 DGVILTSVLSACANVGDLDYGRWVH-EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
D V+ SVL+AC++ G + GR V E + ++ +VD+ + G +E AL+T
Sbjct: 334 DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 366 FNEMPC-KNIFTWNALLN 382
+P KN W L+
Sbjct: 394 IQSIPIEKNDVIWRTFLS 411
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 14/281 (4%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C LKS K+IH Q+ G+ + V +++ +G+ + ++ ++ + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGE-MELSSAVFEKLESKT 197
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQI 131
++ ++S++S+ AG +L +R + L + + L +CA + GM I
Sbjct: 198 AA-SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
HG +++ ++ VQ SLV +Y C A +F +M R+ ++++++I+G A G
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 192 DEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNA 247
+ A+ MF M +EP+ +VS+L C SG ++ GRR+ + K + + E
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC 376
Query: 248 LMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQ 287
L+D+ + L EA + +P +K+ V W + +S QC+
Sbjct: 377 LVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS---QCR 414
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 215/402 (53%), Gaps = 8/402 (1%)
Query: 104 GFLPDSYTFPAMLKSCA-MFLGIGEGMQIHGIV-IKMGLVCDLYVQNSLVHLYGVCDDCR 161
GF+P S ++L C M H +V + + + + +LV +Y DD
Sbjct: 143 GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHA 202
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCG 218
+A VFD+M V++ VSWT++I+G ++ V +F +M N+ PN T +S+L C
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 219 R-SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
+ + + IHG F+ + A M MY +C +S ++ +F +D+V W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
S+ISG + E + L +M GIE + V L +++SAC N L + VH I +
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
I +G A++DMYAKCG + A + F E+ K++ +W++++N +HG G AL+ F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
+ M+ G +++ FLAIL+AC H+GLV++ + F Q + +Y++ LEHY C +LL
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ--AGKYHMPVTLEHYACYINLLG 500
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
R G +D+A + MPM P I +LLSAC+ G L + +
Sbjct: 501 RFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 174/347 (50%), Gaps = 22/347 (6%)
Query: 103 NGFLPDSYTFPAMLKSCAM----FLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
NGF + P+++K+CA FL G Q+H + +K G CD V NSL+ +Y
Sbjct: 43 NGF---TAILPSVIKACAFQQEPFL---LGAQLHCLCLKAGADCDTVVSNSLISMYAKFS 96
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLV 215
+ KVFDEM RD VS+ SII + GL EA+ + M P + SLL
Sbjct: 97 RKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLA 156
Query: 216 GCGRSG-NLRMGRRIHGLIF-KRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDI 273
C R G + ++ R H L+ + S+ S AL+DMY+K + + A +F ++ K+
Sbjct: 157 LCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNE 216
Query: 274 VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG----RW 329
VSWT++ISG V Q + + LFR M + P+ V L SVL AC +L+YG +
Sbjct: 217 VSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV---ELNYGSSLVKE 273
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR 389
+H + R D + A + MY +CG + + F +++ W+++++G A G
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
+ +M EG N VT LAI++AC +S L+ +Q++
Sbjct: 334 CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 183/393 (46%), Gaps = 15/393 (3%)
Query: 32 LVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSSFPFNSLISSYAGSDR 89
LV + + L+ +VD + K F D F Q + + + + ++IS +
Sbjct: 176 LVDERMQESVLLSTALVDMYLK---FDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQN 231
Query: 90 PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM--QIHGIVIKMGLVCDLYVQ 147
++ + +R + R P+ T ++L +C L G + +IHG + G D +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVE-LNYGSSLVKEIHGFSFRHGCHADERLT 290
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVE 204
+ + +Y C + + +F+ VRDVV W+S+I+GYA G E + + M +E
Sbjct: 291 AAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIE 350
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
N+ T ++++ C S L +H I K + NAL+DMY KC LS A+++
Sbjct: 351 ANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREV 410
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
F+EL +KD+VSW+S+I+ E+L +F+ M G E D + ++LSAC + G +
Sbjct: 411 FYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLV 470
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNG 383
+ + + + + + +++ + G I+ A + MP K + W++LL+
Sbjct: 471 EEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSA 530
Query: 384 LAMHGRGYAALKFF--EEMVGEGSTPNEVTFLA 414
HGR A K E M E P L+
Sbjct: 531 CETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 280 ISGLVQCQRPKESLVLFR-KMHSSGIEPDGVILTSVLSACANVGD-LDYGRWVHEYIDRR 337
+ GLV Q E+L L++ K+HS G IL SV+ ACA + G +H +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
D + +++ MYAK + F+EM ++ ++ +++N G Y A+K
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
+EM G P ++L C G K + F+ ++
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV 175
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 195/314 (62%), Gaps = 14/314 (4%)
Query: 189 GLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
G A + ++ +P T SLL G+LR +R+ F + L A N++
Sbjct: 81 GQRTHAQILLFGLDKDPFVRT--SLLNMYSSCGDLRSAQRV----FDDSGSKDLPAWNSV 134
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM-----HSSG 303
++ Y K + +A+++F E+P+++++SW+ +I+G V C + KE+L LFR+M + +
Sbjct: 135 VNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAF 194
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+ P+ +++VLSAC +G L+ G+WVH YID+ ++ DI +GTA++DMYAKCG +ERA
Sbjct: 195 VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 364 QTFNEMPC-KNIFTWNALLNGLAMHGRGYAALKFFEEM-VGEGSTPNEVTFLAILTACCH 421
+ FN + K++ ++A++ LAM+G + F EM + PN VTF+ IL AC H
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
GL+++G+ YF MI +++ ++P ++HYGCM DL R+GL+ EA + +MPM PDVLI
Sbjct: 315 RGLINEGKSYFKMMI-EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 482 GALLSACKDKGILK 495
G+LLS + G +K
Sbjct: 374 GSLLSGSRMLGDIK 387
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 172/364 (47%), Gaps = 46/364 (12%)
Query: 71 RVSSFPFNSLISSYA---GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGE 127
++ SF +N +I + S + I Y ++ + PD +TFP +L S L +
Sbjct: 21 KLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPL 80
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD------------------- 168
G + H ++ GL D +V+ SL+++Y C D RSA +VFD
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 169 ------------EMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN--------VEPNTA 208
EMP R+V+SW+ +I GY G + EA+ +F M V PN
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 209 TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL 268
T ++L CGR G L G+ +H I K ++ + AL+DMY KC L AK++F+ L
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 269 -PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS-GIEPDGVILTSVLSACANVGDLDY 326
KKD+ +++++I L E LF +M +S I P+ V +L AC + G ++
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 327 GR-WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGL 384
G+ + I+ I I MVD+Y + G I+ A MP + ++ W +LL+G
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 385 AMHG 388
M G
Sbjct: 381 RMLG 384
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 258 LSEAKQIFH-ELPKKDIVSWTSIISGLVQ-CQRPK--ESLVLFRKMHSSGIEPDGVILTS 313
++ A IFH K + W II +V P+ + ++ +M + + PD
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKC----------------- 356
+L + N L G+ H I + +D + T++++MY+ C
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 357 --------------GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
G I+ A + F+EMP +N+ +W+ L+NG M G+ AL F EM
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 403 EGST-----PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
PNE T +L+AC G +++G K+ + I +Y++ + + D+
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYI-DKYHVEIDIVLGTALIDMYA 245
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALL 485
+ G L+ A + + DV A++
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMI 273
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 204/364 (56%), Gaps = 5/364 (1%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
++H +K V + V N+ V Y C A +VF + + V SW ++I G+A++
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 190 LFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
++ L M + P++ T SLL C + +LR+G+ +HG I + + L
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+++ +Y+ C L + +F + K +VSW ++I+G +Q P +L +FR+M GI+
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
G+ + V AC+ + L GR H Y + ++ D I +++DMYAK G I ++ + F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
N + K+ +WNA++ G +HG A+K FEEM G P+++TFL +LTAC HSGL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV-RTMPMAPDVLILGALL 485
+G +Y +QM S + L P L+HY C+ D+L RAG LD+AL +V M DV I +LL
Sbjct: 716 EGLRYLDQMKS-SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Query: 486 SACK 489
S+C+
Sbjct: 775 SSCR 778
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 209/407 (51%), Gaps = 17/407 (4%)
Query: 26 KKIHAQLVTSGIVRNDLVV-KRVVDFFG--KSVDFVDFGCGFLKQCDWRVSSFPFNSLIS 82
+KIH + S +RND V+ R++ + S D F L+ + F +N++IS
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL----FQWNAVIS 159
Query: 83 SYAGSDRPQIAILCYRQIVRN-GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
SY+ ++ + + +++ LPD +T+P ++K+CA +G G+ +HG+V+K GLV
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV 219
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
D++V N+LV YG A ++FD MP R++VSW S+I ++ G +E+ + M
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279
Query: 202 NVE-------PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
E P+ AT V++L C R + +G+ +HG K L +NALMDMY K
Sbjct: 280 MEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 339
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG--IEPDGVILT 312
C C++ A+ IF K++VSW +++ G + + R+M + G ++ D V +
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
+ + C + L + +H Y ++ + + A V YAKCG + A + F+ + K
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ +WNAL+ G A +L +M G P+ T ++L+AC
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 231/529 (43%), Gaps = 73/529 (13%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP------FNSLI 81
+H +V +G+V + V +V F+G GF+ P +NS+I
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTH--------GFVTDALQLFDIMPERNLVSWNSMI 260
Query: 82 SSYAGSDRPQIAILCYRQIVR-NG---FLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
++ + + + L +++ NG F+PD T +L CA IG G +HG +K
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG----LFDE 193
+ L +L + N+L+ +Y C +A +F ++VVSW +++ G++ G FD
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 194 AVTMFLS-MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
M +V+ + T ++ + C L + +H K+ + +NA + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
KC LS A+++FH + K + SW ++I G Q P+ SL +M SG+ PD +
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG--CIERALQTFNEMP 370
S+LSAC+ + L G+ VH +I R ++RD+ + +++ +Y CG C +AL F+ M
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL--FDAME 558
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC----------- 419
K++ +WN ++ G +G AL F +MV G ++ + + AC
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Query: 420 ------------------------CHSGLVDKGRKYFNQMISQQY-NLSPRLEHYGCMTD 454
+G + + K FN + + + + + YG
Sbjct: 619 AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI--- 675
Query: 455 LLCRAGLLDEALMLVRTMPMA---PDVLILGALLSACKDKGILKLPTRY 500
GL EA+ L M PD L +L+AC G++ RY
Sbjct: 676 ----HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 166/349 (47%), Gaps = 11/349 (3%)
Query: 103 NGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI-KMGLVCDLYVQNSLVHLYGVCDDCR 161
+ FL +L++ I G +IH +V L D + ++ +Y +C
Sbjct: 78 DAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD 137
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGC 217
+ VFD + +++ W ++I+ Y+R L+DE + F+ M ++ P+ T+ ++ C
Sbjct: 138 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
++ +G +HGL+ K + NAL+ Y +++A Q+F +P++++VSW
Sbjct: 198 AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWN 257
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIE----PDGVILTSVLSACANVGDLDYGRWVHEY 333
S+I +ES +L +M + PD L +VL CA ++ G+ VH +
Sbjct: 258 SMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGW 317
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
+ + +++ + A++DMY+KCGCI A F KN+ +WN ++ G + G +
Sbjct: 318 AVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT 377
Query: 394 LKFFEEMV--GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
+M+ GE +EVT L + C H + ++ + Q++
Sbjct: 378 FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 163/368 (44%), Gaps = 27/368 (7%)
Query: 19 CNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
C+ LKS K++H ++ + + R+ V V+ + + F D + S+
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
N++I+ Y + P A+ +RQ+V G + + +C++ + G + H
Sbjct: 566 --NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
+K L D ++ SL+ +Y + KVF+ + + SW ++I GY GL EA+
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 196 TMFLSMNV---EPNTATFVSLLVGCGRSGNLRMG-RRIHGLIFKRASKVSLEASNALMDM 251
+F M P+ TF+ +L C SG + G R + + K +L+ ++DM
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 252 YVKCECLSEAKQIFHE--LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE---- 305
+ L +A ++ E + D+ W S++S R ++L + K+ + E
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC----RIHQNLEMGEKVAAKLFELEPE 799
Query: 306 -PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI---ER 361
P+ +L S L A +G + R V + ++ ++++D G + +++ K ER
Sbjct: 800 KPENYVLLSNLY--AGLGKWEDVRKVRQRMNEMSLRKD--AGCSWIELNRKVFSFVVGER 855
Query: 362 ALQTFNEM 369
L F E+
Sbjct: 856 FLDGFEEI 863
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 245/466 (52%), Gaps = 7/466 (1%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGS 87
IH V G++ + V ++ + K + F+ D V S+ +++I+SY +
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW--SAMIASYEQA 379
Query: 88 DRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQ 147
+ AI +R ++R P++ T ++L+ CA G IH IK + +L
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--- 204
+++ +Y C A K F+ +P++D V++ ++ GY + G ++A ++ +M +
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P++ T V +L C + G ++G I K ++AL++M+ KC+ L+ A +
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 265 FHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
F + +K VSW +++G + + +E++ FR+M +P+ V +++ A A +
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSA 619
Query: 324 LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG 383
L G VH + + +G ++VDMYAKCG IE + + F E+ K I +WN +L+
Sbjct: 620 LRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSA 679
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
A HG A+ F M P+ V+FL++L+AC H+GLV++G++ F +M +++ +
Sbjct: 680 YAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM-GERHKIE 738
Query: 444 PRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+EHY CM DLL +AGL EA+ ++R M + V + GALL++ +
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSR 784
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 230/478 (48%), Gaps = 17/478 (3%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL +R C N + ++H L+ SG+ ++ ++ F + + V F
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIF------DSVRD 61
Query: 72 VSSFPFNSLISSY--AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
+NS+I Y AG R + Y G PD Y+F LK+CA + +G+
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMS-EEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
+IH ++ +MGL D+Y+ +LV +Y D SA +VFD+M V+DVV+W ++++G A+ G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 190 LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
A+ +F M V+ + + +L+ + + R +HGL+ K+ + S+
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF--SS 238
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
L+DMY C L A+ +F E+ +KD SW ++++ +E L LF M + +
Sbjct: 239 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 298
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ V S L A A VGDL G +H+Y ++ + D+ + T+++ MY+KCG +E A Q F
Sbjct: 299 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 358
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
+ +++ +W+A++ G+ A+ F +M+ PN VT ++L C
Sbjct: 359 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGAL 484
G+ I + ++ LE + + + G AL +P+ D + AL
Sbjct: 419 LGKSIHCYAI--KADIESELETATAVISMYAKCGRFSPALKAFERLPI-KDAVAFNAL 473
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 48/415 (11%)
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+G+ IH ++ GL+ D+ V SL+ +Y C + A ++F + RDVVSW+++IA Y
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 187 RAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+AG DEA+++F M +++PN T S+L GC R+G+ IH K + LE
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+ A++ MY KC S A + F LP KD V++ ++ G Q ++ +++ M G
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+ PD + +L CA D G V+ I + + H+ A+++M+ KC + A+
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 364 QTFNEMPC-KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC-- 420
F++ K+ +WN ++NG +HG+ A+ F +M E PN VTF+ I+ A
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 421 ---------HS------------------------GLVDKGRKYFNQMISQQYNLSPRLE 447
HS G+++ K F + IS +Y +S
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE-ISNKYIVS---- 672
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILKLPTR 499
+ M GL A+ L +M + PD + ++LSAC+ G+++ R
Sbjct: 673 -WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 212/459 (46%), Gaps = 12/459 (2%)
Query: 16 IRRCNNLKSFKK---IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C FKK IH + G+ + + +V+ + K+ D V F K V
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
++ N+++S A + A+L + + D + ++ + + +H
Sbjct: 167 VTW--NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLH 224
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
G+VIK G + + L+ +Y C D +A VF+E+ +D SW +++A YA G F+
Sbjct: 225 GLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
E + +F M +V N S L G+L G IH ++ + + +LM
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM 342
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
MY KC L A+Q+F + +D+VSW+++I+ Q + E++ LFR M I+P+ V
Sbjct: 343 SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAV 402
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
LTSVL CA V G+ +H Y + I+ ++ TA++ MYAKCG AL+ F +
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
P K+ +NAL G G A ++ M G P+ T + +L C +G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
+ Q+I ++ + H + ++ + L A++L
Sbjct: 523 CVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVL 559
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 158/320 (49%), Gaps = 6/320 (1%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ FN+L Y A Y+ + +G PDS T ML++CA G ++G
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV-RDVVSWTSIIAGYARAGLFD 192
+IK G + +V ++L++++ CD +A +FD+ + VSW ++ GY G +
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 193 EAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EAV F M VE PN TFV+++ LR+G +H + + N+L+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
DMY KC + +++ F E+ K IVSW +++S ++ LF M + ++PD V
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSV 706
Query: 310 ILTSVLSACANVGDLDYGRWVHEYI-DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
SVLSAC + G ++ G+ + E + +R I+ ++ MVD+ K G A++
Sbjct: 707 SFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRR 766
Query: 369 MPCK-NIFTWNALLNGLAMH 387
M K ++ W ALLN MH
Sbjct: 767 MRVKTSVGVWGALLNSSRMH 786
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 250/474 (52%), Gaps = 20/474 (4%)
Query: 26 KKIHAQLVTSGIVRNDLVV-KRVVDFFGKSVDFVDFGCGFLKQCDW------RVSSFPFN 78
K+IHA ++ S ++L V ++ + + CG + Q + +N
Sbjct: 267 KEIHASVLKSSTHSSELYVCNALIAMYTR--------CGKMPQAERILRQMNNADVVTWN 318
Query: 79 SLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM 138
SLI Y + + A+ + ++ G D + +++ + + GM++H VIK
Sbjct: 319 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 378
Query: 139 GLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF 198
G +L V N+L+ +Y C+ G+ F M +D++SWT++IAGYA+ EA+ +F
Sbjct: 379 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 438
Query: 199 LSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC 255
+ +E + S+L ++ + + IH I ++ + N L+D+Y KC
Sbjct: 439 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG-LLDTVIQNELVDVYGKC 497
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
+ A ++F + KD+VSWTS+IS E++ LFR+M +G+ D V L +L
Sbjct: 498 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 557
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
SA A++ L+ GR +H Y+ R+ + I A+VDMYA CG ++ A F+ + K +
Sbjct: 558 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 617
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+ +++N MHG G AA++ F++M E +P+ ++FLA+L AC H+GL+D+GR + ++
Sbjct: 618 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL-KI 676
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ +Y L P EHY C+ D+L RA + EA V+ M P + ALL+AC+
Sbjct: 677 MEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR 730
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 247/523 (47%), Gaps = 44/523 (8%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVD---FGCGFLKQ 67
LL + +++S ++H+ LV G +V +V + K+ D GF ++
Sbjct: 150 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 209
Query: 68 CDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGE 127
D + +NS++SSY+ S + + +R++ G P+SYT + L +C F
Sbjct: 210 GD----AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 265
Query: 128 GMQIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
G +IH V+K +LYV N+L+ +Y C A ++ +M DVV+W S+I GY
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 325
Query: 187 RAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ ++ EA+ F M + + + S++ GR NL G +H + K +L+
Sbjct: 326 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 385
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
N L+DMY KC + F + KD++SWT++I+G Q E+L LFR +
Sbjct: 386 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 445
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+E D +IL S+L A + + + + +H +I R+ + D I +VD+Y KC + A
Sbjct: 446 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 504
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
+ F + K++ +W ++++ A++G A++ F MV G + + V L IL+A
Sbjct: 505 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 564
Query: 424 LVDKGRKYFNQMISQQYNLSPRL-----EHYGCMTDL---------LCRAGLLDEALML- 468
++KGR+ ++ + + L + + Y C DL + R GLL M+
Sbjct: 565 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 624
Query: 469 -----------------VRTMPMAPDVLILGALLSACKDKGIL 494
+R ++PD + ALL AC G+L
Sbjct: 625 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 667
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 187/351 (53%), Gaps = 5/351 (1%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
++F +N++I +Y + P A+ Y + G +FPA+LK+CA I G ++H
Sbjct: 109 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 168
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIAGYARAGLF 191
+++K+G ++ N+LV +Y DD +A ++FD + D V W SI++ Y+ +G
Sbjct: 169 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 228
Query: 192 DEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNA 247
E + +F M++ PN+ T VS L C ++G+ IH + K ++ S L NA
Sbjct: 229 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 288
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L+ MY +C + +A++I ++ D+V+W S+I G VQ KE+L F M ++G + D
Sbjct: 289 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 348
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
V +TS+++A + +L G +H Y+ + ++ +G ++DMY+KC + F
Sbjct: 349 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 408
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
M K++ +W ++ G A + AL+ F ++ + +E+ +IL A
Sbjct: 409 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 459
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 138/262 (52%), Gaps = 5/262 (1%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCG 218
S KVFDEMP R +W ++I Y G A+ ++ +M VE ++F +LL C
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK-DIVSWT 277
+ ++R G +H L+ K + NAL+ MY K + LS A+++F +K D V W
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
SI+S + E+L LFR+MH +G P+ + S L+AC G+ +H + +
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276
Query: 338 AI-KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
+ ++++ A++ MY +CG + +A + +M ++ TWN+L+ G + AL+F
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336
Query: 397 FEEMVGEGSTPNEVTFLAILTA 418
F +M+ G +EV+ +I+ A
Sbjct: 337 FSDMIAAGHKSDEVSMTSIIAA 358
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 178/381 (46%), Gaps = 16/381 (4%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPF 77
R +NL + ++HA ++ G N V ++D + K G FL+ D + S +
Sbjct: 361 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS--W 418
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
++I+ YA +D A+ +R + + D ++L++ ++ + +IH +++
Sbjct: 419 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 478
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
GL+ D +QN LV +YG C + A +VF+ + +DVVSWTS+I+ A G EAV +
Sbjct: 479 KGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 537
Query: 198 FLSMNVEPNTATFVSLL---VGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F M +A V+LL L GR IH + ++ + + A++DMY
Sbjct: 538 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 597
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
C L AK +F + +K ++ +TS+I+ K ++ LF KM + PD + ++
Sbjct: 598 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 657
Query: 315 LSACANVGDLDYGRWV-----HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
L AC++ G LD GR HEY ++ +VDM + C+ A + M
Sbjct: 658 LYACSHAGLLDEGRGFLKIMEHEY----ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 713
Query: 370 PCK-NIFTWNALLNGLAMHGR 389
+ W ALL H
Sbjct: 714 KTEPTAEVWCALLAACRSHSE 734
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+EA ++++ K +S+ K +F E+P + +W ++I V P +L L+ M
Sbjct: 80 VEAFAYVLELCGKRRAVSQEK-VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 138
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
G+ ++L ACA + D+ G +H + + I A+V MYAK +
Sbjct: 139 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 198
Query: 362 ALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
A + F+ K + WN++L+ + G+ L+ F EM G PN T ++ LTAC
Sbjct: 199 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 258
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGC--MTDLLCRAGLLDEALMLVRTMPMAPDV 478
G++ ++ + S E Y C + + R G + +A ++R M A DV
Sbjct: 259 GFSYAKLGKEIHASVLKSSTHSS---ELYVCNALIAMYTRCGKMPQAERILRQMNNA-DV 314
Query: 479 LILGALL 485
+ +L+
Sbjct: 315 VTWNSLI 321
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 217/403 (53%), Gaps = 36/403 (8%)
Query: 125 IGEGMQIHGIVIKMGLVCD--LYVQNSLVH-LYGVCDDCRSAGKVFDEMPVRDVVSWTSI 181
+ E +QIH +++ L+ V N +H Y R + +F + D+ +T+
Sbjct: 42 VDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAA 101
Query: 182 IAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCG-RSGNL------RMGRRIH- 230
I + GL D+A ++ LS + PN TF SLL C +SG L + G I
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDP 161
Query: 231 ----GLI---------------FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
GL+ F R + SL +S A++ Y K + A+ +F + ++
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI-EPDGVILTSVLSACANVGDLDYGRWV 330
DIVSW +I G Q P ++L+LF+K+ + G +PD + + + LSAC+ +G L+ GRW+
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
H ++ I+ ++ + T ++DMY+KCG +E A+ FN+ P K+I WNA++ G AMHG
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
Query: 391 YAALKFFEEMVG-EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
AL+ F EM G G P ++TF+ L AC H+GLV++G + F M Q+Y + P++EHY
Sbjct: 342 QDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM-GQEYGIKPKIEHY 400
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
GC+ LL RAG L A ++ M M D ++ ++L +CK G
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 46/368 (12%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F F + I++ + + A L Y Q++ + P+ +TF ++LKSC+ G IH
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTH 151
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----------------------- 171
V+K GL D YV LV +Y D SA KVFD MP
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 172 --------VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE----PNTATFVSLLVGCGR 219
RD+VSW +I GYA+ G ++A+ +F + E P+ T V+ L C +
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEAS--NALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
G L GR IH +F ++S++ L L+DMY KC L EA +F++ P+KDIV+W
Sbjct: 272 IGALETGRWIH--VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 278 SIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
++I+G +++L LF +M +G++P + L ACA+ G ++ G + E + +
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 337 R-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAAL 394
IK I +V + + G ++RA +T M + W+++L +HG
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGK 449
Query: 395 KFFEEMVG 402
+ E ++G
Sbjct: 450 EIAEYLIG 457
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 135/316 (42%), Gaps = 41/316 (12%)
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMF 122
F C+ + S+ N +I YA P A++ +++++ G PD T A L +C+
Sbjct: 215 FDSMCERDIVSW--NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
+ G IH V + ++ V L+ +Y C A VF++ P +D+V+W ++I
Sbjct: 273 GALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 332
Query: 183 AGYARAGLFDEAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
AGYA G +A+ +F M ++P TF+ L C +G + G RI
Sbjct: 333 AGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF-------- 384
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
E + + I K I + ++S L + + K + +
Sbjct: 385 -----------------ESMGQEYGI-----KPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M+ ++ D V+ +SVL +C GD G+ + EY+ IK I + ++YA G
Sbjct: 423 MN---MDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNS-GIYVLLSNIYASVGD 478
Query: 359 IERALQTFNEMPCKNI 374
E + N M K I
Sbjct: 479 YEGVAKVRNLMKEKGI 494
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 217/407 (53%), Gaps = 46/407 (11%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
+S T ++L C G GMQ+H + +K G ++YV SLV +Y C + A ++F
Sbjct: 131 NSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMF 187
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNL 223
+++P + VV++ + I+G G+ + ++F M + EPN TFV+ + C NL
Sbjct: 188 EKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNL 247
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISG 282
+ GR++HGL+ K+ + AL+DMY KC C A +F EL ++++SW S+ISG
Sbjct: 248 QYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISG 307
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVI-------------------------------- 310
++ + + ++ LF K+ S G++PD
Sbjct: 308 MMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPS 367
Query: 311 ---LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
LTS+LSAC+++ L G+ +H ++ + A +RDI + T+++DMY KCG A + F+
Sbjct: 368 LKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFD 427
Query: 368 --EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
E K+ WN +++G HG +A++ FE + E P+ TF A+L+AC H G V
Sbjct: 428 RFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNV 487
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+KG + F +++ ++Y P EH GCM DLL R+G L EA ++ M
Sbjct: 488 EKGSQIF-RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 193/357 (54%), Gaps = 17/357 (4%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
P+ +TFP +LKSCA + +G +H V+K G D++ +LV +Y A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNL 223
DEMP R + S + ++G G +A MF V N+ T S+L GC G++
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
G ++H L K ++ + +L+ MY +C A ++F ++P K +V++ + ISGL
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 284 VQ---CQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
++ L RK S EP+ V + ++ACA++ +L YGR +H + ++ +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMP-CKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+ +GTA++DMY+KC C + A F E+ +N+ +WN++++G+ ++G+ A++ FE+
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
+ EG P+ T+ ++++ G V + K+F +M+S + P L+ C+T LL
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS--VVMVPSLK---CLTSLL 375
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 50/309 (16%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
P+ TF + +CA L + G Q+HG+V+K + V +L+ +Y C +SA V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 167 FDEMP-VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSG- 221
F E+ R+++SW S+I+G G + AV +F ++ E P++AT+ SL+ G + G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 222 ----------------------------------NLRMGRRIHGLIFKRASKVSLEASNA 247
L+ G+ IHG + K A++ + +
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 248 LMDMYVKCECLSEAKQIFHEL-PK-KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
L+DMY+KC S A++IF PK KD V W +ISG + + ++ +F + +E
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 306 PDGVILTSVLSACANVGDLDYGRWV-----HEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
P T+VLSAC++ G+++ G + EY + + + HIG M+D+ + G +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE---HIG-CMIDLLGRSGRLR 524
Query: 361 RALQTFNEM 369
A + ++M
Sbjct: 525 EAKEVIDQM 533
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 136/259 (52%), Gaps = 4/259 (1%)
Query: 185 YARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA 244
Y + L ++ + ++ PN TF LL C + G++ GR +H + K V +
Sbjct: 9 YRVSNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFT 68
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
+ AL+ MY+K + +++A ++ E+P++ I S + +SGL++ +++ +F SG
Sbjct: 69 ATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGS 128
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
+ V + SVL C GD++ G +H + + ++++GT++V MY++CG A +
Sbjct: 129 GMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 365 TFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSG 423
F ++P K++ T+NA ++GL +G F M S PN+VTF+ +TAC
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 424 LVDKGRKYFNQMISQQYNL 442
+ GR+ ++ +++
Sbjct: 246 NLQYGRQLHGLVMKKEFQF 264
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
S +NSLIS ++ + A + +++ +P ++L +C+ + G +IHG
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHG 392
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD--EMPVRDVVSWTSIIAGYARAGLF 191
VIK D++V SL+ +Y C A ++FD E +D V W +I+GY + G
Sbjct: 393 HVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGEC 452
Query: 192 DEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR-ASKVSLEASNA 247
+ A+ +F + VEP+ ATF ++L C GN+ G +I L+ + K S E
Sbjct: 453 ESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGC 512
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK--MHSSGIE 305
++D+ + L EAK++ ++ + ++S++ Q P VL + M + +E
Sbjct: 513 MIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDP----VLGEEAAMKLAELE 568
Query: 306 PDG----VILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
P+ VIL+S+ +A D++ R V ID++ + +
Sbjct: 569 PENPAPFVILSSIYAALERWEDVESIRQV---IDQKQLVK 605
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 230/469 (49%), Gaps = 69/469 (14%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ + +N++++SY+ Q AI + Q+ + PD Y+F A+L +CA + G +
Sbjct: 32 ELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRK 91
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD---------------------- 168
I +VI+ G L V NSL+ +YG C D SA KVF
Sbjct: 92 IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNA 151
Query: 169 -----------EMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLL 214
EMP R +W +I+G+A G + +++F M +P+ TF SL+
Sbjct: 152 EQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLM 211
Query: 215 VGC-GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK-------------CECLSE 260
C S N+ GR +H ++ K ++EA N+++ Y K E L++
Sbjct: 212 NACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQ 271
Query: 261 ------------------AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
A ++FH P+K+IV+WT++I+G + +++L F +M S
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G++ D +VL AC+ + L +G+ +H + + ++G A+V++YAKCG I+ A
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F ++ K++ +WN +L +HG ALK ++ M+ G P+ VTF+ +LT C HS
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT 471
GLV++G F M+ + Y + ++H CM D+ R G L EA L T
Sbjct: 452 GLVEEGCMIFESMV-KDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATT 499
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 181/434 (41%), Gaps = 100/434 (23%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCG 218
SA +VFD MP D V+W +++ Y+R GL EA+ +F + + +P+ +F ++L C
Sbjct: 22 SARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA 81
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC----------------------- 255
GN++ GR+I L+ + SL +N+L+DMY KC
Sbjct: 82 SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 256 ----------ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
E A +F E+PK+ +W +ISG C + + L LF++M S +
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 306 PDGVILTSVLSAC-ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC------ 358
PD +S+++AC A+ ++ YGR VH + + + +++ Y K G
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 359 -------------------------IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAA 393
E+AL+ F+ P KNI TW ++ G +G G A
Sbjct: 262 ELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQA 321
Query: 394 LKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS---QQY--------NL 442
L+FF EM+ G + + A+L AC L+ G+ +I Q Y NL
Sbjct: 322 LRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNL 381
Query: 443 SPR------------------LEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLIL 481
+ L + M GL D+AL L M + PD +
Sbjct: 382 YAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTF 441
Query: 482 GALLSACKDKGILK 495
LL+ C G+++
Sbjct: 442 IGLLTTCSHSGLVE 455
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 216/497 (43%), Gaps = 75/497 (15%)
Query: 21 NLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD-------FVDFGCGFLKQCDW--- 70
N+K +KI + ++ SG + V ++D +GK D F D C + W
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 71 ---------------------RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDS 109
+ +F +N +IS +A + + + +++++ + F PD
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 110 YTFPAMLKSC-AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLY-------------- 154
YTF +++ +C A + G +H +++K G + +NS++ Y
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 155 -----------GVCDDCRSAG------KVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
+ D C G +VF P +++V+WT++I GY R G ++A+
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 198 FLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F+ M V+ + + ++L C L G+ IHG + + NAL+++Y K
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
C + EA + F ++ KD+VSW +++ ++L L+ M +SGI+PD V +
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 315 LSACANVGDLDYGRWVHEYI--DRRAIKRDIHIGTAMVDMYAKCGCIERA---LQTFNEM 369
L+ C++ G ++ G + E + D R I ++ T M+DM+ + G + A T++ +
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKDYR-IPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSL 503
Query: 370 --PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
N +W LL + H + +++ E++F+ + C +G +
Sbjct: 504 VTDSSNNSSWETLLGACSTHWHTELG-REVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKE 562
Query: 428 GRKYFNQMISQQYNLSP 444
G +M+ + +P
Sbjct: 563 GEDVRREMVERGMKKTP 579
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 37/269 (13%)
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
++ A+Q+F +P+ D V+W ++++ + +E++ LF ++ S +PD T++LS
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG------------C------- 358
CA++G++ +GR + + R + + +++DMY KC C
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 359 --------------IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
E AL F EMP + F WN +++G A G+ + L F+EM+
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE 199
Query: 405 STPNEVTFLAILTAC-CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
P+ TF +++ AC S V GR M+ + S +E + + G D
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW--SSAVEAKNSVLSFYTKLGSRD 257
Query: 464 EALMLVRTMPMAPDVLILGALLSACKDKG 492
+A+ + ++ + V +++ AC G
Sbjct: 258 DAMRELESIEVLTQV-SWNSIIDACMKIG 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
T+ + AK G I A Q F+ MP + WN +L + G A+ F ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 407 PNEVTFLAILTACCHSGLVDKGRK 430
P++ +F AIL+ C G V GRK
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRK 91
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 230/429 (53%), Gaps = 11/429 (2%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N LIS + P+ A+ ++ R G + D + P LK+C+ + G Q+H V+
Sbjct: 207 WNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV---RDVVSWTSIIAGYARAGLFDE 193
K GL + ++L+ +Y C A VF + + V W S+++G+ +
Sbjct: 266 KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEA 325
Query: 194 AVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A+ + L + ++ T L C NLR+G ++H L+ ++ + L+D
Sbjct: 326 ALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVD 385
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
++ + +A ++FH LP KDI++++ +I G V+ + LFR++ G++ D I
Sbjct: 386 LHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFI 445
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
++++L C+++ L +G+ +H ++ + + TA+VDMY KCG I+ + F+ M
Sbjct: 446 VSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML 505
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
+++ +W ++ G +GR A ++F +M+ G PN+VTFL +L+AC HSGL+++ R
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS 565
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC-- 488
M S +Y L P LEHY C+ DLL +AGL EA L+ MP+ PD I +LL+AC
Sbjct: 566 TLETMKS-EYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGT 624
Query: 489 -KDKGILKL 496
K+ G++ +
Sbjct: 625 HKNAGLVTV 633
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 232/529 (43%), Gaps = 53/529 (10%)
Query: 16 IRRCNNLKSFKK---IHAQLVTSGIVRNDLVVKRVVDFFGKSVDF---VDFGCGFLKQCD 69
+R C +++FK+ I A ++ GI +N + V+ + VDF D F + +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMY---VDFRLLSDAHKVFDEMSE 68
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIV-RNGFLPDSYTFPAMLKSCAMFLGIGEG 128
+ ++ +++S Y +P AI YR+++ + + + A+LK+C + I G
Sbjct: 69 RNIVTW--TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
+ ++ + K L D+ + NS+V +Y A F E+ SW ++I+GY +A
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 189 GLFDEAVTMFLSMNVEPNTATFVSLLVG-------------------------------- 216
GL DEAVT+F M +PN ++ L+ G
Sbjct: 187 GLMDEAVTLFHRMP-QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 217 --CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP---KK 271
C G L MG+++H + K + S A +AL+DMY C L A +FH+
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
+ W S++SG + + + +L L +++ S + D L+ L C N +L G VH
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
+ + D +G+ +VD++A G I+ A + F+ +P K+I ++ L+ G G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 392 AALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC 451
A F E++ G ++ IL C + G++ I + Y P
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT--A 483
Query: 452 MTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRY 500
+ D+ + G +D ++L M + DV+ ++ G ++ RY
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRY 531
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 183/369 (49%), Gaps = 8/369 (2%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSS--FPFNSLISS 83
K++H +V SG+ + + ++D + + + Q V+S +NS++S
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLI-YAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 84 YAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
+ ++ + A+ QI ++ DSYT LK C ++ + G+Q+H +V+ G D
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LS 200
V + LV L+ + + A K+F +P +D+++++ +I G ++G A +F +
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 201 MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
+ ++ + ++L C +L G++IHGL K+ + + AL+DMYVKC +
Sbjct: 437 LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDN 496
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
+F + ++D+VSWT II G Q R +E+ F KM + GIEP+ V +LSAC +
Sbjct: 497 GVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 321 VGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFT-WN 378
G L+ R E + ++ + +VD+ + G + A + N+MP + T W
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWT 616
Query: 379 ALLNGLAMH 387
+LL H
Sbjct: 617 SLLTACGTH 625
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 186/423 (43%), Gaps = 42/423 (9%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
D A L+ C G I VIK G+ ++++ N+++ +Y A KVF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNL 223
DEM R++V+WT++++GY G ++A+ ++ M N + ++L CG G++
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVK----------------------------- 254
++G ++ I K + + N+++DMYVK
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 255 CEC--LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
C+ + EA +FH +P+ ++VSW +ISG V P+ +L +M G+ DG L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALP 242
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC- 371
L AC+ G L G+ +H + + ++ +A++DMY+ CG + A F++
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 372 --KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
++ WN++L+G ++ AAL ++ + T L C + + G
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ + ++ Y L + + DL G + +A L +P D++ L+ C
Sbjct: 363 QVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCV 419
Query: 490 DKG 492
G
Sbjct: 420 KSG 422
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 229/428 (53%), Gaps = 11/428 (2%)
Query: 77 FNSLISSYAGSDRPQIAI-LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++I Y +D +I L I + D T+ + + + G Q HG V
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
K + + NSL+ +Y C + VF M RDVVSW ++I+ + + GL DE +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 196 TMFLSMNVEPNTATFVSLLVGCGRSGNLR---MGRRIHGLIFKRASKVSLEASNA-LMDM 251
+ M + ++++ + NLR +G++ H + ++ + E N+ L+DM
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG--IQFEGMNSYLIDM 462
Query: 252 YVKCECLSEAKQIFHE--LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
Y K + ++++F ++D +W S+ISG Q +++ ++FRKM I P+ V
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
+ S+L AC+ +G +D G+ +H + R+ + +++ + +A+VDMY+K G I+ A F++
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
+N T+ ++ G HG G A+ F M G P+ +TF+A+L+AC +SGL+D+G
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL-GALLSAC 488
K F +M + YN+ P EHY C+TD+L R G ++EA V+ + ++ L G+LL +C
Sbjct: 643 KIFEEM-REVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 489 KDKGILKL 496
K G L+L
Sbjct: 702 KLHGELEL 709
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 223/464 (48%), Gaps = 41/464 (8%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R + +N+LIS Y + R A + ++R P +F + + ++ I +
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 131 IHGIVIKMG--LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
+G+++K+G V DL+V +S + +Y D S+ +VFD R++ W ++I Y +
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 189 GLFDEAVTMFL----SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA 244
E++ +FL S + + T++ + +GR+ HG + K ++ +
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 245 SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
N+LM MY +C + ++ +F + ++D+VSW ++IS VQ E L+L +M G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
+ D + +T++LSA +N+ + + G+ H ++ R+ I+ + + + ++DMY+K G I + +
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQK 474
Query: 365 TF--NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
F + ++ TWN++++G +G F +M+ + PN VT +IL AC
Sbjct: 475 LFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQI 534
Query: 423 GLVDKG--------RKYFNQMI------SQQYNLSPRLEH---------------YGCMT 453
G VD G R+Y +Q + Y+ + +++ Y M
Sbjct: 535 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMI 594
Query: 454 DLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSACKDKGIL 494
+ G+ + A+ L +M + PD + A+LSAC G++
Sbjct: 595 LGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 191/400 (47%), Gaps = 17/400 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLP--DSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N++I + ++ P A+L Y ++ + D+YT+ + LK+CA + G +H
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCH 132
Query: 135 VIKMGLVCDLYVQNSLVHLYGVC---DDCRS---AGKVFDEMPVRDVVSWTSIIAGYARA 188
+I+ V NSL+++Y C DC KVFD M ++VV+W ++I+ Y +
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 189 GLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV--SLE 243
G EA F + M V+P+ +FV++ S +++ +GL+ K + L
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLF 252
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF-RKMHSS 302
++ + MY + + ++++F +++I W ++I VQ ES+ LF + S
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
I D V SA + + ++ GR H ++ + + I I +++ MY++CG + ++
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
F M +++ +WN +++ +G L EM +G + +T A+L+A +
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
+ G++ +I Q + Y + D+ ++GL+
Sbjct: 433 RNKEIGKQTHAFLIRQGIQFEG-MNSY--LIDMYSKSGLI 469
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 167/393 (42%), Gaps = 62/393 (15%)
Query: 153 LYGVCDDCRS--AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-VEPNTA- 208
L +C D A ++FD +P V W +II G+ L EA+ + M P T
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 209 ---TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC----ECLSE- 260
T+ S L C + NL+ G+ +H + + S N+LM+MYV C +C
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 261 -AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA 319
+++F + +K++V+W ++IS V+ R E+ F M ++P V +V A +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 320 -----NVGDLDYG---RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
++ YG + EY+ +D+ + ++ + MYA+ G IE + + F+
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYV------KDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRK 430
+NI WN ++ + +++ F E +G +EVT+L +A V+ GR+
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 431 YFNQMISQQYNLSP------------------------------RLEHYGCMTDLLCRAG 460
F+ +S+ + P + + M + G
Sbjct: 340 -FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 461 LLDEALMLVRTMP---MAPDVLILGALLSACKD 490
L DE LMLV M D + + ALLSA +
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 199/381 (52%), Gaps = 46/381 (12%)
Query: 161 RSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE------AVTMF---LSMNVEPNTATFV 211
R A VF P + ++I + L DE A+T++ ++ +P+T TF
Sbjct: 64 RYAYSVFTHQPCPNTYLHNTMIRALS---LLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
+L R ++ GR+IHG + S+ L+ MY C L +A+++F E+ K
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 272 DI---------------------------------VSWTSIISGLVQCQRPKESLVLFRK 298
D+ VSWT +ISG + R E++ +F++
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M +EPD V L +VLSACA++G L+ G + Y+D R + R + + A++DMYAK G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
I +AL F + +N+ TW ++ GLA HG G AL F MV G PN+VTF+AIL+A
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
C H G VD G++ FN M S +Y + P +EHYGCM DLL RAG L EA ++++MP +
Sbjct: 361 CSHVGWVDLGKRLFNSMRS-KYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA 419
Query: 479 LILGALLSACKDKGILKLPTR 499
I G+LL+A L+L R
Sbjct: 420 AIWGSLLAASNVHHDLELGER 440
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 45/422 (10%)
Query: 8 LKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ 67
L W + NNLK+ K+ H ++ +G+ R++L V + ++ + F Q
Sbjct: 14 LNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQ 73
Query: 68 -CDWRVSSFPFNSLISSYAGSDRPQ---IAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
C +++ N++I + + D P IAI YR++ PD++TFP +LK
Sbjct: 74 PCP---NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVS 130
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDV-------- 175
+ G QIHG V+ G ++V L+ +Y C A K+FDEM V+DV
Sbjct: 131 DVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLA 190
Query: 176 -------------------------VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNT 207
VSWT +I+GYA++G EA+ +F M NVEP+
Sbjct: 191 GYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDE 250
Query: 208 ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
T +++L C G+L +G RI + R ++ +NA++DMY K +++A +F
Sbjct: 251 VTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFEC 310
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ ++++V+WT+II+GL E+L +F +M +G+ P+ V ++LSAC++VG +D G
Sbjct: 311 VNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLG 370
Query: 328 -RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLA 385
R + + I +I M+D+ + G + A + MP K N W +LL
Sbjct: 371 KRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASN 430
Query: 386 MH 387
+H
Sbjct: 431 VH 432
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 242/480 (50%), Gaps = 18/480 (3%)
Query: 20 NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNS 79
++L K+ H +V GI + + +++ + K +F D F + + ++ N
Sbjct: 50 DHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTW--NI 107
Query: 80 LISSYAGSD-----RPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
LI D R + +I+ D +F +++ C + G+Q+H +
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
++K GL + SLVH YG C A +VF+ + RD+V W ++++ Y G+ DEA
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 195 VTMFLSMNVEPNTA-----TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+ M + N TF SLL C + G++IH ++FK + + + + AL+
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
+MY K LS+A++ F + +++VSW ++I G Q +E++ LF +M ++PD +
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
SVLS+CA + + V + ++ + + +++ Y++ G + AL F+ +
Sbjct: 344 TFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI 403
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
++ +W +++ LA HG +L+ FE M+ + P+++TFL +L+AC H GLV +G
Sbjct: 404 REPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGL 462
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ F +M ++ Y + EHY C+ DLL RAG +DEA ++ +MP P L A C
Sbjct: 463 RCFKRM-TEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCN 521
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 196/363 (53%), Gaps = 4/363 (1%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
+IH IV++ G + L+ V D A +VFDEM + W ++ GY R
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
L E++ ++ M V P+ T+ ++ + G+ G +H + K +
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
L+ MY+K LS A+ +F + KD+V+W + ++ VQ +L F KM + ++
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D + S+LSAC +G L+ G +++ + I +I + A +DM+ KCG E A F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 367 NEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
EM +N+ +W+ ++ G AM+G AL F M EG PN VTFL +L+AC H+GLV+
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 427 KGRKYFNQMI-SQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+G++YF+ M+ S NL PR EHY CM DLL R+GLL+EA ++ MP+ PD I GALL
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 486 SAC 488
AC
Sbjct: 389 GAC 391
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 186/373 (49%), Gaps = 11/373 (2%)
Query: 23 KSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLIS 82
K KKIHA ++ +G + ++ ++++ D F + R+ F +N+L
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRI--FLWNTLFK 82
Query: 83 SYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVC 142
Y + P ++L Y+++ G PD +T+P ++K+ + G +H V+K G C
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM- 201
V LV +Y + SA +F+ M V+D+V+W + +A + G A+ F M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 202 --NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
V+ ++ T VS+L CG+ G+L +G I+ K ++ NA +DM++KC
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 260 EAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA 319
A+ +F E+ ++++VSW+++I G +E+L LF M + G+ P+ V VLSAC+
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 320 NVGDLDYGRWVHEYI----DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NI 374
+ G ++ G+ + D+ R H MVD+ + G +E A + +MP + +
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA-CMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 375 FTWNALLNGLAMH 387
W ALL A+H
Sbjct: 382 GIWGALLGACAVH 394
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 248/487 (50%), Gaps = 53/487 (10%)
Query: 16 IRRCNNLKSFKK---IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
+ C+NL + K+ +H V +G+ + V + F+ KS + + F + D +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
F + S+I+S A S + + + ++ G PD ++ + + +G H
Sbjct: 297 --FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
G V NSL+ +Y C+ F+ + V
Sbjct: 355 GTVC-----------NSLLSMY-----CK-----FELLSV-------------------- 373
Query: 193 EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
A +F ++ E N + ++L G G + +G+ +H + K + +++ N+L+D+Y
Sbjct: 374 -AEKLFCRISEEGNKEAWNTMLKGYGA---VLLGKSLHCYVVKTSLDLTISVVNSLIDLY 429
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
K L+ A ++F E ++++W ++I+ V C++ ++++ LF +M S +P + L
Sbjct: 430 GKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 488
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
++L AC N G L+ G+ +H YI + ++ + A++DMYAKCG +E++ + F+ K
Sbjct: 489 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 548
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
+ WN +++G MHG +A+ F++M P TFLA+L+AC H+GLV++G+K F
Sbjct: 549 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 608
Query: 433 NQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+M QY++ P L+HY C+ DLL R+G L+EA V +MP +PD +I G LLS+C G
Sbjct: 609 LKM--HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 666
Query: 493 ILKLPTR 499
++ R
Sbjct: 667 EFEMGIR 673
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 227/509 (44%), Gaps = 73/509 (14%)
Query: 21 NLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSS----FP 76
+L+S +K +A ++T G+ N V +++ + +G L + + + F
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLIS------SYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NS+I ++ + ++ + ++ +G PD +T P ++ +CA L G +HG+V+
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 137 KMG-LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
K G + V S V+ Y C + A VFDEMP RDVV+WT+II+G+ + G + +
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 196 TMFLSMNV------EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
M+ +PN T C G L+ GR +HG K S +++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
Y K SEA F EL +D+ SWTSII+ L + +ES +F +M + G+ PDGV
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 310 ILTSVLSACANVGDLDYGRWVH----------------------------EYIDRRA--- 338
+++ +++ + + G+ H E ++ A
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNT 392
Query: 339 ------------------IKRDIHIGTAMV----DMYAKCGCIERALQTFNEMPCKNIFT 376
+K + + ++V D+Y K G + A + F E N+ T
Sbjct: 393 MLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVIT 451
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
WNA++ + A+ F+ MV E P+ +T + +L AC ++G +++G+ +
Sbjct: 452 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 511
Query: 437 SQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
++ ++ L + D+ + G L+++
Sbjct: 512 ETEHEMNLSLS--AALIDMYAKCGHLEKS 538
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 186/331 (56%), Gaps = 8/331 (2%)
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGN 222
+F +P+ D + S+I ++ L V + LS NV P+ TF S++ C
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
LR+G+ +H + AL+ Y KC + A+Q+F +P+K IV+W S++SG
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
Q E++ +F +M SG EPD S+LSACA G + G WVH+YI + +
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
+ +GTA++++Y++CG + +A + F++M N+ W A+++ HG G A++ F +M
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 403 E-GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+ G PN VTF+A+L+AC H+GLV++GR + +M ++ Y L P +EH+ CM D+L RAG
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM-TKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 462 LDEALMLVRTMPM---APDVLILGALLSACK 489
LDEA + + A + A+L ACK
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACK 392
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 210/390 (53%), Gaps = 22/390 (5%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFF--GKSVDFVDFGCGFLKQCDWRVS 73
+R +K +++HA L+ +G R+ ++ +++ +++ + + D
Sbjct: 16 VRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPD---- 71
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF--LGIGEGMQI 131
F FNS+I S + P + YR+++ + P +YTF +++KSCA L IG+G+
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H +V GL D YVQ +LV Y C D A +VFD MP + +V+W S+++G+ + GL
Sbjct: 132 HAVVSGFGL--DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 192 DEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
DEA+ +F M EP++ATFVSLL C ++G + +G +H I ++++ AL
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS-GIEPD 307
+++Y +C + +A+++F ++ + ++ +WT++IS ++++ LF KM G P+
Sbjct: 250 INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDR--RAIKRDIHIGTAMVDMYAKCGCIERALQT 365
V +VLSACA+ G ++ GR V++ + + R I H MVDM + G ++ A +
Sbjct: 310 NVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH-HVCMVDMLGRAGFLDEAYKF 368
Query: 366 FNEMPCKNIFT----WNALLNGLAMHGRGY 391
+++ T W A+L MH R Y
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMH-RNY 397
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 6/294 (2%)
Query: 199 LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECL 258
++ V N+A + +++ R L+ ++H + S L+ + +
Sbjct: 1 MTTKVAANSAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAI 57
Query: 259 SEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
+ +F +P D + S+I + + P + +R+M SS + P TSV+ +C
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
A++ L G+ VH + D ++ A+V Y+KCG +E A Q F+ MP K+I WN
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
+L++G +G A++ F +M G P+ TF+++L+AC +G V G +IS+
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+L+ +L + +L R G + +A + M +V A++SA G
Sbjct: 238 GLDLNVKLG--TALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 191/332 (57%), Gaps = 12/332 (3%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM--FLSMNVEPNTATFVSLLVGCGR 219
SA KVF EM ++VV WTS+I GY L + V+ + ++ E + + +++ G
Sbjct: 46 SANKVFCEMVEKNVVLWTSMINGYL---LNKDLVSARRYFDLSPERDIVLWNTMISGYIE 102
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
GN+ R + F + + + N +++ Y + +++F ++P++++ SW +
Sbjct: 103 MGNMLEARSL----FDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 280 ISGLVQCQRPKESLVLFRKMHSSG-IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA 338
I G Q R E L F++M G + P+ +T VLSACA +G D+G+WVH+Y +
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 339 IKR-DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+ D+++ A++DMY KCG IE A++ F + +++ +WN ++NGLA HG G AL F
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
EM G +P++VTF+ +L AC H GLV+ G YFN M + +++ P +EH GC+ DLL
Sbjct: 279 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT-DFSIMPEIEHCGCVVDLLS 337
Query: 458 RAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
RAG L +A+ + MP+ D +I LL A K
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLLGASK 369
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM- 201
D+ N+++ Y D + +VFD+MP R+V SW +I GYA+ G E + F M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 202 ---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA-SKVSLEASNALMDMYVKCEC 257
+V PN AT +L C + G G+ +H +KV + NAL+DMY KC
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+ A ++F + ++D++SW ++I+GL E+L LF +M +SGI PD V VL A
Sbjct: 240 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA 299
Query: 318 CANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIF 375
C ++G ++ G + + +I +I +VD+ ++ G + +A++ N+MP K +
Sbjct: 300 CKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAV 359
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMV 401
W LL ++ + EE++
Sbjct: 360 IWATLLGASKVYKKVDIGEVALEELI 385
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 138/294 (46%), Gaps = 44/294 (14%)
Query: 238 SKVSLEASNALMDMYVKC--ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVL 295
+K S E+ N + + C ++ A ++F E+ +K++V WTS+I+G + + LV
Sbjct: 22 AKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLL----NKDLVS 77
Query: 296 FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
R+ E D V+ +++S +G++ R + + + RD+ +++ YA
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP----CRDVMSWNTVLEGYAN 133
Query: 356 CGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLA 414
G +E + F++MP +N+F+WN L+ G A +GR L F+ MV EGS PN+ T
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 415 ILTACCHSGLVDKGR---KYFNQMISQQYNLSPR---LEHYG------------------ 450
+L+AC G D G+ KY + + +++ + ++ YG
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 451 ------CMTDLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSACKDKGILK 495
M + L G EAL L M ++PD + +L ACK G+++
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
F +N LI YA + R + ++++V G +P+ T +L +CA G +H
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 134 IVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
+G D+ V+N+L+ +YG C A +VF + RD++SW ++I G A G
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV-SLEASNAL 248
EA+ +F M + P+ TFV +L C G + G +F S + +E +
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 249 MDMYVKCECLSEAKQIFHELP-KKDIVSWTSII 280
+D+ + L++A + +++P K D V W +++
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 217/393 (55%), Gaps = 10/393 (2%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM-GLVCDLYVQNSLVHLYGVCDDCRSAGK 165
P++YT +L +C + G++I +++ L + + + L+ L+ VC A K
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 166 VFDEMPVRDVVS---WTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
+FD++ +++ W ++ GY+R G +A+ +++ M +EP + L C
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
+LR+GR IH I KR KV N L+ +Y++ +A+++F + ++++V+W S+
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
IS L + R E LFRKM I LT++L AC+ V L G+ +H I +
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
K D+ + +++DMY KCG +E + + F+ M K++ +WN +LN A++G + FE
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M+ G P+ +TF+A+L+ C +GL + G F +M ++ +SP LEHY C+ D+L RA
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALEHYACLVDILGRA 487
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
G + EA+ ++ TMP P I G+LL++C+ G
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 21/318 (6%)
Query: 84 YAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
Y+ + P+ A++ Y ++ + P +++ LK+C + G IH ++K D
Sbjct: 211 YSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVD 270
Query: 144 LYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLS 200
V N L+ LY G+ DD R KVFD M R+VV+W S+I+ ++ E +F
Sbjct: 271 QVVYNVLLKLYMESGLFDDAR---KVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRK 327
Query: 201 MNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCEC 257
M E + AT ++L C R L G+ IH I K K + N+LMDMY KC
Sbjct: 328 MQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGE 387
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+ ++++F + KD+ SW +++ +E + LF M SG+ PDG+ ++LS
Sbjct: 388 VEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSG 447
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTA------MVDMYAKCGCIERALQTFNEMPC 371
C++ G +YG + E +K + + A +VD+ + G I+ A++ MP
Sbjct: 448 CSDTGLTEYGLSLFE-----RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPF 502
Query: 372 K-NIFTWNALLNGLAMHG 388
K + W +LLN +HG
Sbjct: 503 KPSASIWGSLLNSCRLHG 520
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 221/435 (50%), Gaps = 12/435 (2%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +N+LIS YA + A++ ++++ + GF D +T ++ +C + + + Q+H
Sbjct: 105 TVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHC 162
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM-PVRDVVSWTSIIAGYARAGLFD 192
+ G V N+ V Y R A VF M +RD VSW S+I Y +
Sbjct: 163 FSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA 222
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+A+ ++ M + + T S+L +L GR+ HG + K + + L+
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282
Query: 250 DMYVKC---ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR-PKESLVLFRKMHSSGIE 305
D Y KC + + +++++F E+ D+V W ++ISG + +E++ FR+M G
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD-IHIGTAMVDMYAKCGCIERALQ 364
PD V SAC+N+ + +H + I + I + A++ +Y K G ++ A
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402
Query: 365 TFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGL 424
F+ MP N ++N ++ G A HG G AL ++ M+ G PN++TF+A+L+AC H G
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Query: 425 VDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGAL 484
VD+G++YFN M + + + P EHY CM DLL RAG L+EA + MP P + AL
Sbjct: 463 VDEGQEYFNTM-KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521
Query: 485 LSACKDKGILKLPTR 499
L AC+ + L R
Sbjct: 522 LGACRKHKNMALAER 536
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 52/407 (12%)
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
V ++ Y ++S +H+ A ++FDE+P D VS+ ++I+GYA A A
Sbjct: 74 VFSYNVIVKAYAKDSKIHI---------ARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 195 VTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ +F M E + T L+ C + + +++H +NA +
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 252 YVKCECLSEAKQIFHELPK-KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
Y K L EA +F+ + + +D VSW S+I Q + ++L L+++M G + D
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE---RALQTFN 367
L SVL+A ++ L GR H + + ++ H+G+ ++D Y+KCG + + + F
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 368 EMPCKNIFTWNALLNGLAMHGR-GYAALKFFEEMVGEGSTPNEVTFLAILTACCH----- 421
E+ ++ WN +++G +M+ A+K F +M G P++ +F+ + +AC +
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 422 -----SGLVDKGR------KYFNQMISQQY---NLS---------PRLE--HYGCMTDLL 456
GL K N +IS Y NL P L + CM
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 457 CRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILKLPTRY 500
+ G EAL+L + M +AP+ + A+LSAC G + Y
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 156/347 (44%), Gaps = 31/347 (8%)
Query: 173 RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
RD+ + S+ A Y ++ + A + +LS + FV+L CGR R
Sbjct: 22 RDLFTGKSLHALYVKSIV---ASSTYLSNH-------FVNLYSKCGRLSYARAA------ 65
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
F + ++ + N ++ Y K + A+Q+F E+P+ D VS+ ++ISG + +
Sbjct: 66 -FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
+VLF++M G E DG L+ +++AC + DL + +H + + A V
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 353 YAKCGCIERALQTFNEM-PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
Y+K G + A+ F M ++ +WN+++ H G AL ++EM+ +G + T
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 412 FLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC-MTDLLCRAGLLDEALMLVR 470
++L A + GR++ ++I ++ + H G + D + G D +
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS---HVGSGLIDFYSKCGGCDGMYDSEK 299
Query: 471 TMP--MAPDVLILGALLSACK-----DKGILKLPTRYTRPPHRAWDC 510
++PD+++ ++S + +K + R HR DC
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 19 CNNLKS---FKKIHAQLVTSGIVRNDLVVKR-VVDFFGKSVDFVDFGCGFLKQCDWRVSS 74
C+NL S K+IH + S I N + V ++ + KS + D F + + +++
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE--LNA 412
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
FN +I YA A+L Y++++ +G P+ TF A+L +CA + EG +
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
+ + F P + ++ +I RAG +EA
Sbjct: 473 M----------------------------KETFKIEP--EAEHYSCMIDLLGRAGKLEEA 502
Query: 195 VTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRR 228
+M +P + + +LL C + N+ + R
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 536
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 218/411 (53%), Gaps = 6/411 (1%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL+ R + +++H +V G V N +V +V F+ + + F +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 72 VSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
V S+ ++IS+ + AI + ++ + FLP+ +T ++LK+C+ + G Q+
Sbjct: 249 VISW--TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
H +V+K + D++V SL+ +Y C + KVFD M R+ V+WTSIIA +AR G
Sbjct: 307 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366
Query: 192 DEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+EA+++F M ++ N T VS+L CG G L +G+ +H I K + + ++ + L
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ +Y KC +A + +LP +D+VSWT++ISG E+L ++M G+EP+
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 486
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
+S L ACAN L GR +H + ++ +G+A++ MYAKCG + A + F+
Sbjct: 487 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 546
Query: 369 MPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
MP KN+ +W A++ G A +G ALK M EG ++ F IL+ C
Sbjct: 547 MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 242/473 (51%), Gaps = 21/473 (4%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+L ++++ N ++ K+IHA + +D V+ +FG ++ G L
Sbjct: 87 LLAEWLQSSNGMRLIKRIHAMALK---CFDDQVI-----YFGNNLISSCVRLGDLVYARK 138
Query: 71 RVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMFL 123
S P + ++I Y A + V++G + F +L C+
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
G Q+HG ++K+G V +L V++SLV+ Y C + SA + FD M +DV+SWT++I+
Sbjct: 199 EFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 184 GYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
+R G +A+ MF+ M PN T S+L C LR GR++H L+ KR K
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
+ +LMDMY KC +S+ +++F + ++ V+WTSII+ + +E++ LFR M
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
+ + + + S+L AC +VG L G+ +H I + +I+++++IG+ +V +Y KCG
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 361 RALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
A ++P +++ +W A+++G + G AL F +EM+ EG PN T+ + L AC
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
+S + GR + I+++ + + + + + G + EA + +MP
Sbjct: 498 NSESLLIGRSIHS--IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 174/328 (53%), Gaps = 15/328 (4%)
Query: 10 WVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVD---FFGKSVDFVDFGCGFLK 66
W L + C+ LK+ + A + G + LVVKR++ F G S+ + CG +
Sbjct: 279 WFLPNEFTVCSILKACSEEKA--LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 67 QCD------WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA 120
C ++ + S+I+++A + AI +R + R + ++ T ++L++C
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 121 MFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTS 180
+ G ++H +IK + ++Y+ ++LV LY C + R A V ++P RDVVSWT+
Sbjct: 397 SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 181 IIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
+I+G + G EA+ M VEPN T+ S L C S +L +GR IH + K
Sbjct: 457 MISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFR 297
+ ++ +AL+ MY KC +SEA ++F +P+K++VSW ++I G + +E+L L
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLD 325
+M + G E D I ++LS C ++ +LD
Sbjct: 577 RMEAEGFEVDDYIFATILSTCGDI-ELD 603
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 10/249 (4%)
Query: 191 FDEAVTMFLSMNV-EPNTATFVS------LLVGCGRSGN-LRMGRRIHGLIFKRASKVSL 242
FD + F NV + ++++F S LL +S N +R+ +RIH + K +
Sbjct: 58 FDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVI 117
Query: 243 EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
N L+ V+ L A+++F +P+K+ V+WT++I G ++ E+ LF
Sbjct: 118 YFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 303 GIE-PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
GI + + +L+ C+ + + GR VH + + + I + +++V YA+CG +
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTS 236
Query: 362 ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
AL+ F+ M K++ +W A+++ + G G A+ F M+ PNE T +IL AC
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 422 SGLVDKGRK 430
+ GR+
Sbjct: 297 EKALRFGRQ 305
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 209/427 (48%), Gaps = 78/427 (18%)
Query: 132 HGIVIKMGLVCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
G+ +K + C +S+VH Y G D RS +FD M R+V++WT++I GY +A
Sbjct: 201 QGMAVKEVVSC-----SSMVHGYCKMGRIVDARS---LFDRMTERNVITWTAMIDGYFKA 252
Query: 189 GLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEA 244
G F++ +FL M +V+ N+ T + C R G +IHGL+ + + L
Sbjct: 253 GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFL 312
Query: 245 SNALMDMY-------------------------------VKCECLSEAKQIFHELPKKDI 273
N+LM MY V+ + +SEA ++F ++P KD+
Sbjct: 313 GNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM 372
Query: 274 VSWTSIISGL-------------------------------VQCQRPKESLVLFRKMHSS 302
VSWT +I G V +E+L F KM
Sbjct: 373 VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
+ P+ +SVLSA A++ DL G +H + + I D+ + ++V MY KCG A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F+ + NI ++N +++G + +G G ALK F + G PN VTFLA+L+AC H
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILG 482
G VD G KYF M S YN+ P +HY CM DLL R+GLLD+A L+ TMP P + G
Sbjct: 553 GYVDLGWKYFKSMKS-SYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWG 611
Query: 483 ALLSACK 489
+LLSA K
Sbjct: 612 SLLSASK 618
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 168/373 (45%), Gaps = 76/373 (20%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLY------------- 154
+S T M K+C F+ EG QIHG+V +M L DL++ NSL+ +Y
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 155 GVCDDCRS------------------AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
GV + S A ++F++MP +D+VSWT +I G++ G + V
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVE 393
Query: 197 MF----------------------------------LSMNVEPNTATFVSLLVGCGRSGN 222
+F L V PN+ TF S+L +
Sbjct: 394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
L G +IHG + K L N+L+ MY KC ++A +IF + + +IVS+ ++ISG
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
K++L LF + SSG EP+GV ++LSAC +VG +D G W +Y +
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG-W--KYFKSMKSSYN 570
Query: 343 IHIG----TAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR---GYAAL 394
I G MVD+ + G ++ A + MPCK + W +LL+ H R A
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 395 KFFEEMVGEGSTP 407
K E+ + +TP
Sbjct: 631 KKLIELEPDSATP 643
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 199/429 (46%), Gaps = 26/429 (6%)
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
FL+ + F NS IS +A + Q A +RQ+ + ++ AM+ + A
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIV----SWIAMISAYAENG 95
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
+ + Q+ +M + + + D A ++F ++P ++ VS+ ++I
Sbjct: 96 KMSKAWQVFD---EMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMIT 152
Query: 184 GYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGL-IFKRASKVSL 242
G+ RAG FDEA ++ V+ + ++L+ SG LR G+ + +F+ + +
Sbjct: 153 GFVRAGRFDEAEFLYAETPVKFRDSVASNVLL----SGYLRAGKWNEAVRVFQGMAVKEV 208
Query: 243 EASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
+ ++++ Y K + +A+ +F + ++++++WT++I G + ++ LF +M
Sbjct: 209 VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 303 G-IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
G ++ + L + AC + G +H + R ++ D+ +G +++ MY+K G +
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 362 ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
A F M K+ +WN+L+ GL + A + FE+M G+ + V++ ++
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSG 384
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDV 478
G + K + F M+ ++ N++ + M G +EAL M + P+
Sbjct: 385 KGEISKCVELFG-MMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 479 LILGALLSA 487
++LSA
Sbjct: 439 YTFSSVLSA 447
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 128/249 (51%), Gaps = 15/249 (6%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ ++IS++ + + A+ + ++++ P+SYTF ++L + A + EG+QIHG V+
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
KM +V DL VQNSLV +Y C + A K+F + ++VS+ ++I+GY+ G +A+
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 197 MFL---SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR-ASKVSLEAS----NAL 248
+F S EPN TF++LL C G + +G + FK S ++E +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK----YFKSMKSSYNIEPGPDHYACM 581
Query: 249 MDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
+D+ + L +A + +P K W S++S R + + +K+ +EPD
Sbjct: 582 VDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIE--LEPD 639
Query: 308 GVILTSVLS 316
VLS
Sbjct: 640 SATPYVVLS 648
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 193/344 (56%), Gaps = 8/344 (2%)
Query: 155 GVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVS 212
G+C + R A +FDEM R+VV+WT++I GY + D A +F M E ++ S
Sbjct: 181 GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP-EKTEVSWTS 239
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
+L+G SG + F+ + A NA++ + + +S+A+++F + +D
Sbjct: 240 MLLGYTLSGRIEDAEEF----FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
+W +I + E+L LF +M G+ P L S+LS CA + L YGR VH
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYA 392
++ R D+++ + ++ MY KCG + +A F+ K+I WN++++G A HG G
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 393 ALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCM 452
ALK F EM G+ PN+VT +AILTAC ++G +++G + F M S ++ ++P +EHY C
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES-KFCVTPTVEHYSCT 474
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
D+L RAG +D+A+ L+ +M + PD + GALL ACK L L
Sbjct: 475 VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDL 518
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 9/260 (3%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VE 204
N+++ +G + A +VFD M RD +W +I Y R G EA+ +F M V
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ + +S+L C +L+ GR++H + + + ++ LM MYVKC L +AK +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
F KDI+ W SIISG +E+L +F +M SSG P+ V L ++L+AC+ G L
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 325 DYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLN 382
+ G + E ++ + + + + VDM + G +++A++ M K + W ALL
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 383 GLAMHGR----GYAALKFFE 398
H R AA K FE
Sbjct: 509 ACKTHSRLDLAEVAAKKLFE 528
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 45/366 (12%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSG 221
A VF+ MP R+VVSWT+++ GY + G+ EA ++F M E N ++ + G G
Sbjct: 97 EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDG 155
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
+ R+++ ++ + + AS ++ + + EA+ IF E+ ++++V+WT++I+
Sbjct: 156 RIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMIT 211
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G Q R + LF M E V TS+L G ++ E+ + +K
Sbjct: 212 GYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDA---EEFFEVMPMKP 264
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
I AM+ + + G I +A + F+ M ++ TW ++ G AL F +M
Sbjct: 265 VIAC-NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ 323
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN-------------------- 441
+G P+ + ++IL+ C + GR+ ++ Q++
Sbjct: 324 KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELV 383
Query: 442 ---------LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSACK 489
S + + + GL +EAL + MP + P+ + L A+L+AC
Sbjct: 384 KAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS 443
Query: 490 DKGILK 495
G L+
Sbjct: 444 YAGKLE 449
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 48/274 (17%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSG 221
A K FD + + + SW SI++GY GL EA +F M+ E N ++
Sbjct: 35 EARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-ERNVVSW----------- 82
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
N L+ Y+K + EA+ +F +P++++VSWT+++
Sbjct: 83 ------------------------NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVK 118
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G +Q E+ LF +M E + V T + + G +D R +++ + +
Sbjct: 119 GYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----VK 170
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
D+ T M+ + G ++ A F+EM +N+ TW ++ G + R A K FE M
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM- 229
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
EV++ ++L SG ++ ++F M
Sbjct: 230 ---PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ +I +Y A+ + Q+ + G P + ++L CA + G Q+H ++
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+ D+YV + L+ +Y C + A VFD +D++ W SII+GYA GL +EA+
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRI-HGLIFKRASKVSLEASNALMDMY 252
+F M PN T +++L C +G L G I + K ++E + +DM
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 253 VKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG--- 308
+ + +A ++ + K D W +++ R + V +K+ + EPD
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAGT 536
Query: 309 -VILTSVLSACANVGDL 324
V+L+S+ ++ + GD+
Sbjct: 537 YVLLSSINASRSKWGDV 553
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 245/504 (48%), Gaps = 50/504 (9%)
Query: 9 KWVLLDYIRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFG--KSVDFVDFGCG 63
++ L +R C +L ++IH + +G + VV ++ + K + ++
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY--- 181
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
+ + ++ + S+++ Y+ + AI C+R + R G + YTFP++L +CA
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
G+Q+H ++K G ++YVQ++L+ +Y C + SA + + M V DVVSW S+I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 184 GYARAGLFDEAVTMFLSM---NVEPNTATFVSLL--VGCGRSGNLRMGRRIHGLIFKRAS 238
G R GL EA++MF M +++ + T S+L R+ +++ H LI K
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRT-EMKIASSAHCLIVKTGY 360
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+NAL+DMY K + A ++F + +KD++SWT++++G E+L LF
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M GI PD ++ SVLSA A + L++G+ VH + + + ++V MY KCG
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
+E A FN M +++ TW L+ G A
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYA--------------------------------- 507
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
+GL++ ++YF+ M + Y ++P EHY CM DL R+G + L+ M + PD
Sbjct: 508 --KNGLLEDAQRYFDSMRT-VYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDA 564
Query: 479 LILGALLSACKDKGILKLPTRYTR 502
+ A+L+A + G ++ R +
Sbjct: 565 TVWKAILAASRKHGNIENGERAAK 588
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 8/433 (1%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
++ +N+LIS Y S A + ++ +G P+ YT ++L+ C + + G QIH
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP-VRDVVSWTSIIAGYARAGLF 191
G IK G D+ V N L+ +Y C A +F+ M ++ V+WTS++ GY++ G
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 192 DEAVTMFLSMNVEPNTA---TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+A+ F + E N + TF S+L C R+G ++H I K K ++ +AL
Sbjct: 209 FKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL 268
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+DMY KC + A+ + + D+VSW S+I G V+ E+L +F +MH ++ D
Sbjct: 269 IDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 309 VILTSVLSACA-NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ S+L+ A + ++ H I + + A+VDMYAK G ++ AL+ F
Sbjct: 329 FTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFE 388
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
M K++ +W AL+ G +G ALK F M G TP+++ ++L+A L++
Sbjct: 389 GMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEF 448
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G++ I + S L + + + G L++A ++ +M + D++ L+
Sbjct: 449 GQQVHGNYIKSGFPSS--LSVNNSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVG 505
Query: 488 CKDKGILKLPTRY 500
G+L+ RY
Sbjct: 506 YAKNGLLEDAQRY 518
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 196/427 (45%), Gaps = 30/427 (7%)
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
WR+ PF S I SYA DR ++ N L D + ++ MF + E
Sbjct: 9 WRLPLKPFGSCIHSYA--DRTKLH--------SNLLLGDLSKSGRVDEARQMFDKMPER- 57
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
D + N+++ Y A K+F PV++ +SW ++I+GY ++G
Sbjct: 58 -------------DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSG 104
Query: 190 LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
EA +F M ++PN T S+L C L G +IHG K + + N
Sbjct: 105 SKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVN 164
Query: 247 ALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
L+ MY +C+ +SEA+ +F + +K+ V+WTS+++G Q +++ FR + G +
Sbjct: 165 GLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQ 224
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
+ SVL+ACA+V G VH I + K +I++ +A++DMYAKC +E A
Sbjct: 225 SNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARAL 284
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
M ++ +WN+++ G G AL F M ++ T +IL S
Sbjct: 285 LEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTE 344
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
K + +I + + +L + + D+ + G++D AL + M + DV+ AL+
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVN-NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Query: 486 SACKDKG 492
+ G
Sbjct: 403 TGNTHNG 409
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
N ++ Y LS+A+++F P K+ +SW ++ISG + E+ LF +M S GI+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
P+ L SVL C ++ L G +H + + D+++ ++ MYA+C I A
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 366 FNEMPC-KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGL 424
F M KN TW ++L G + +G + A++ F ++ EG+ N+ TF ++LTAC
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 425 VDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGAL 484
G + ++ + + ++ + D+ + ++ A L+ M + DV+ ++
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALLEGMEV-DDVVSWNSM 299
Query: 485 LSACKDKGIL 494
+ C +G++
Sbjct: 300 IVGCVRQGLI 309
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 209/398 (52%), Gaps = 19/398 (4%)
Query: 112 FPAMLKSCAMFL----GIGEGMQIHGIVIKMGLVCDLYVQNSLVHL--YGVCDDCRSAGK 165
F + C +FL I +QIHG + L D ++ + LV + + D A
Sbjct: 9 FKSRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFART 68
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGN 222
+ +W + GY+ + E++ ++ M ++PN TF LL C
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
L GR+I + K + N L+ +Y C+ S+A+++F E+ ++++VSW SI++
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA 188
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
LV+ + F +M PD + +LSAC G+L G+ VH + R ++ +
Sbjct: 189 LVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELN 246
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
+GTA+VDMYAK G +E A F M KN++TW+A++ GLA +G AL+ F +M+
Sbjct: 247 CRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Query: 403 EGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
E S PN VTFL +L AC H+GLVD G KYF++M + + + P + HYG M D+L RAG
Sbjct: 307 ESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM-EKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 462 LDEALMLVRTMPMAPDVLILGALLSACK------DKGI 493
L+EA ++ MP PD ++ LLSAC D+GI
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGI 403
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 198/384 (51%), Gaps = 14/384 (3%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSV--DFVDFGCGFLKQCDW 70
L +++ C+++K +IH Q+ S + + ++ +V S+ D L D
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
S++ N L Y+ SD P +I Y ++ R G P+ TFP +LK+CA FLG+ G Q
Sbjct: 77 TPSTW--NMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
I V+K G D+YV N+L+HLYG C A KVFDEM R+VVSW SI+ G
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 191 FDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ F M + P+ T V LL CG GNL +G+ +H + R +++ A
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK-MHSSGIEP 306
L+DMY K L A+ +F + K++ +W+++I GL Q +E+L LF K M S + P
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 307 DGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIK-RDIHIGTAMVDMYAKCGCIERALQ 364
+ V VL AC++ G +D G ++ HE IK IH G AMVD+ + G + A
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG-AMVDILGRAGRLNEAYD 371
Query: 365 TFNEMPCK-NIFTWNALLNGLAMH 387
+MP + + W LL+ ++H
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIH 395
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 159/258 (61%), Gaps = 5/258 (1%)
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
N L+D VK + A+++F +P +D+VSW S+ISG Q +E++ LF +M + G++
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
PD V + S LSACA GD G+ +H+Y R+ + D + T +VD YAKCG I+ A++
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F K +FTWNA++ GLAMHG G + +F +MV G P+ VTF+++L C HSGLV
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM----APDVLIL 481
D+ R F+QM S Y+++ ++HYGCM DLL RAGL++EA ++ MP +L
Sbjct: 367 DEARNLFDQMRS-LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 482 GALLSACKDKGILKLPTR 499
LL C+ G +++ +
Sbjct: 426 SGLLGGCRIHGNIEIAEK 443
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 196/427 (45%), Gaps = 55/427 (12%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDL-----------VVKRVVDFFGKSVDFVDFGCGF 64
++ C LK + HAQ +TSG + ND + + S + V +
Sbjct: 11 LKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSV 70
Query: 65 LKQCDWRVSSFPFNSLISSYAGSDRPQIAI-LCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
+ S+F FN++I + ++ + ++ R PD +TFP + K+CA
Sbjct: 71 FRFIT-NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 124 G--IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE------------ 169
+ +H ++ GL+ DL+ N+L+ +Y + SA ++FDE
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 170 -------------------MPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNT 207
MP+RD+VSW S+I+GYA+ EA+ +F +++ ++P+
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 208 ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
VS L C +SG+ + G+ IH ++ + + L+D Y KC + A +IF
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
K + +W ++I+GL + ++ FRKM SSGI+PDGV SVL C++ G +D
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEA 369
Query: 328 RWVHEYIDR-RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-----KNIFTWNALL 381
R + + + + R++ M D+ + G IE A + +MP + + W+ LL
Sbjct: 370 RNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLL 429
Query: 382 NGLAMHG 388
G +HG
Sbjct: 430 GGCRIHG 436
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+RD+ ++D K I RA + F+ MP +++ +WN+L++G A A+K F+E
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
MV G P+ V ++ L+AC SG KG+ + ++ + L + D +
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA--TGLVDFYAKC 297
Query: 460 GLLDEAL 466
G +D A+
Sbjct: 298 GFIDTAM 304
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 240/487 (49%), Gaps = 75/487 (15%)
Query: 76 PFNSLISSYAGSDR-PQIAILCYRQIVR---NGFLPDSYTFPAMLKSCAMFLGIGEGMQI 131
+N+L+S +A +D AI + ++ R + D +T M+K A + G Q+
Sbjct: 88 TYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQL 147
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCD--------------------------------- 158
HG+++K G + +SL+H+Y C
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 159 DCRSAGKVFDEMP-VRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLL 214
D A VF P + D +SW ++IAGYA+ G +EA+ M +SM ++ + +F ++L
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 215 VGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS--------------- 259
+L++G+ +H + K S + S+ ++D+Y KC +
Sbjct: 268 NVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLY 327
Query: 260 ----------------EAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
EAK++F L +K++V WT++ G + ++P L L R ++
Sbjct: 328 SASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANE 387
Query: 304 IE-PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
PD +++ SVL AC+ ++ G+ +H + R I D + TA VDMY+KCG +E A
Sbjct: 388 TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F+ ++ +NA++ G A HG + + FE+M G P+E+TF+A+L+AC H
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHR 507
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM-PMAPDVLIL 481
GLV +G KYF MI + YN+SP HY CM DL +A LD+A+ L+ + + D +IL
Sbjct: 508 GLVLEGEKYFKSMI-EAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVIL 566
Query: 482 GALLSAC 488
GA L+AC
Sbjct: 567 GAFLNAC 573
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/471 (19%), Positives = 179/471 (38%), Gaps = 108/471 (22%)
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA 186
+G H IK G N LV+LY R A VFDEM R+V SW ++IA Y
Sbjct: 6 DGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV 65
Query: 187 RAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSG------------------------- 221
+ EA +F S N E + T+ +LL G ++
Sbjct: 66 KFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDD 125
Query: 222 --------------NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFH- 266
N+ G ++HG++ K + + A ++L+ MY KC E IF+
Sbjct: 126 FTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNG 185
Query: 267 ----------------------ELPK-----------KDIVSWTSIISGLVQCQRPKESL 293
++ K D +SW ++I+G Q +E+L
Sbjct: 186 SCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEAL 245
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
+ M +G++ D +VL+ +++ L G+ VH + + + + + +VD+Y
Sbjct: 246 KMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVY 305
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEM------------- 400
KCG ++ A N+++ ++++ G + G+ A + F+ +
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 401 -------------------VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
E +TP+ + +++L AC ++ G++ +
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+ +L D+ + G ++ A + + D ++ A+++ C G
Sbjct: 426 MDKKL--VTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 228/480 (47%), Gaps = 68/480 (14%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
NSL+ Y + + A+ ++++ F D+ T +LK+CA + G QIH ++
Sbjct: 158 LNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQIL 214
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSA-------------------------GKV----- 166
G+ CD + +SLV++Y C D R A G+V
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 167 -FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--PNTATFVSLLVGCGRSGNL 223
FD R V+ W S+I+GY + EA+ +F M E ++ T +++ C G L
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFL 334
Query: 224 RMGRRIH------GLI-------------------------FKRASKVSLEASNALMDMY 252
G+++H GLI F N+++ +Y
Sbjct: 335 ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVY 394
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
C + +AK++F + K ++SW S+ +G Q E+L F +MH + D V L+
Sbjct: 395 FSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLS 454
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
SV+SACA++ L+ G V + D + ++++D+Y KCG +E + F+ M
Sbjct: 455 SVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS 514
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
+ WN++++G A +G+G+ A+ F++M G P ++TF+ +LTAC + GLV++GRK F
Sbjct: 515 DEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF 574
Query: 433 NQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
M + P EH+ CM DLL RAG ++EA+ LV MP D + ++L C G
Sbjct: 575 ESM-KVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 48/388 (12%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+NS+IS Y ++ A++ + ++ RN DS T A++ +C + G Q+H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 137 KMGLVCDLYVQNSLVHLYGVC----DDCR---------------------------SAGK 165
K GL+ D+ V ++L+ +Y C + C+ A +
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGN 222
VF+ + + ++SW S+ G+++ G E + F M ++ + + S++ C +
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 223 LRMGRRIHGLIFKRASKVSLEA----SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
L +G ++ F RA+ V L++ S++L+D+Y KC + +++F + K D V W S
Sbjct: 466 LELGEQV----FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY--IDR 336
+ISG + E++ LF+KM +GI P + VL+AC G ++ GR + E +D
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALK 395
+ H + MVD+ A+ G +E A+ EMP + W+++L G +G K
Sbjct: 582 GFVPDKEHF-SCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKK 640
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSG 423
E+++ E N V ++ + SG
Sbjct: 641 AAEKII-ELEPENSVAYVQLSAIFATSG 667
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 175/398 (43%), Gaps = 65/398 (16%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN 202
D Y N +V + + A ++F+ MP +DVV+ S++ GY G +EA+ +F +N
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECL---- 258
+ T ++L C L+ G++IH I + + +++L+++Y KC L
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 259 ---------------------------SEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
+E++ +F + ++ W S+ISG + E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD 351
+LVLF +M + E D L +V++AC +G L+ G+ +H + + + DI + + ++D
Sbjct: 303 ALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 352 MYAKCGC-------------------------------IERALQTFNEMPCKNIFTWNAL 380
MY+KCG I+ A + F + K++ +WN++
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
NG + +G L++F +M +EV+ ++++AC ++ G + F + +
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR--ATIV 479
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
L + DL C+ G ++ + TM + +V
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEV 517
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 46/303 (15%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK-----------------------SVDFV 58
L++ K++H G++ + +V ++D + K S+ V
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 59 DFGCGFL---KQCDWRV---SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTF 112
F CG + K+ R+ S +NS+ + ++ + + + Q+ + D +
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 113 PAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV 172
+++ +CA + G Q+ +GL D V +SL+ LY C +VFD M
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 173 RDVVSWTSIIAGYARAGLFDEAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRI 229
D V W S+I+GYA G EA+ +F M+V P TF+ +L C G + GR++
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 230 -------HGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIIS 281
HG + + E + ++D+ + + EA + E+P D W+SI+
Sbjct: 574 FESMKVDHGFVPDK------EHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILR 627
Query: 282 GLV 284
G V
Sbjct: 628 GCV 630
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE-ASNALMDMYVKCECLSEAKQIFHEL 268
+V LL C + R+ +GL+ K+ S+ +N L+ MY + + A+ +F E+
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 269 PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
P ++ SW ++I G + SL F M P+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM------PE--------------------- 121
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHG 388
RD + +V +AK G + A + FN MP K++ T N+LL+G ++G
Sbjct: 122 ------------RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 389 RGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEH 448
AL+ F+E+ + + +T +L AC + G++ Q++ ++
Sbjct: 170 YAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN- 225
Query: 449 YGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+ ++ + G L A ++ + PD L AL+S + G
Sbjct: 226 -SSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISGYANCG 267
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
+ ++ MY++ G + A F+EMP +N F+WN ++ G G +L+FF+ M
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM---- 119
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
+ ++ +++ +G + R+ FN M + L H + G +E
Sbjct: 120 PERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN------GYAEE 173
Query: 465 ALMLVRTMPMAPDVLILGALLSACKDKGILK 495
AL L + + + D + L +L AC + LK
Sbjct: 174 ALRLFKELNFSADAITLTTVLKACAELEALK 204
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 222/422 (52%), Gaps = 10/422 (2%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S +NS+IS YA + A+ + + N +F +++K CA + Q+H
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP-VRDVVSWTSIIAGYARAGLF 191
V+K G + D ++ +L+ Y C A ++F E+ V +VVSWT++I+G+ +
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 192 DEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+EAV +F M V PN T+ +L + +H + K + S AL
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTAL 434
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+D YVK + EA ++F + KDIV+W+++++G Q + ++ +F ++ GI+P+
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Query: 309 VILTSVLSACANV-GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+S+L+ CA + G+ H + + + + + +A++ MYAK G IE A + F
Sbjct: 495 FTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 368 EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
K++ +WN++++G A HG+ AL F+EM + VTF+ + AC H+GLV++
Sbjct: 555 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA 487
G KYF+ M+ + ++P EH CM DL RAG L++A+ ++ MP I +L+A
Sbjct: 615 GEKYFDIMV-RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Query: 488 CK 489
C+
Sbjct: 674 CR 675
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 225/436 (51%), Gaps = 17/436 (3%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++H Q + G + + V +VD + K +F D F + + V ++ +LIS YA
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW--TTLISGYA 170
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ + + ++ G P+S+TF A L A G G+Q+H +V+K GL +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN--- 202
V NSL++LY C + R A +FD+ V+ VV+W S+I+GYA GL EA+ MF SM
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
V + ++F S++ C LR ++H + K ALM Y KC + +A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 263 QIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
++F E+ ++VSWT++ISG +Q +E++ LF +M G+ P+ + +L+A +
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALL 381
+ VH + + +R +GTA++D Y K G +E A + F+ + K+I W+A+L
Sbjct: 411 SPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 382 NGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGL-VDKGRKYFNQMISQQY 440
G A G AA+K F E+ G PNE TF +IL C + + +G+++ +
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF------HGF 520
Query: 441 NLSPRLEHYGCMTDLL 456
+ RL+ C++ L
Sbjct: 521 AIKSRLDSSLCVSSAL 536
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 179/344 (52%), Gaps = 4/344 (1%)
Query: 79 SLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM 138
SL+ ++ R Q A + I R G D F ++LK A G Q+H IK
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 139 GLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF 198
G + D+ V SLV Y + + KVFDEM R+VV+WT++I+GYAR + DE +T+F
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 199 LSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC 255
+ M E PN+ TF + L G G ++H ++ K ++ SN+L+++Y+KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
+ +A+ +F + K +V+W S+ISG E+L +F M + + SV+
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC-KNI 374
CAN+ +L + +H + + D +I TA++ Y+KC + AL+ F E+ C N+
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 375 FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
+W A+++G + A+ F EM +G PNE T+ ILTA
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 142/276 (51%), Gaps = 5/276 (1%)
Query: 151 VHLYGVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEP 205
++ +G R +A +FD+ P RD S+ S++ G++R G EA +FL+++ +E
Sbjct: 32 IYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM 91
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
+ + F S+L + GR++H K + +L+D Y+K + +++F
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 266 HELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD 325
E+ ++++V+WT++ISG + E L LF +M + G +P+ + L A G
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 326 YGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLA 385
G VH + + + + I + +++++Y KCG + +A F++ K++ TWN++++G A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 386 MHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
+G AL F M +E +F +++ C +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%)
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
L A +F + P +D S+ S++ G + R +E+ LF +H G+E D I +SVL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
A + D +GR +H + D+ +GT++VD Y K + + F+EM +N+ TW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
L++G A + L F M EG+ PN TF A L G+ +G
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 38/386 (9%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV---TMFL 199
+LY N++V Y A VFD MP RDVVSW +++ GYA+ G EA+ F
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 200 SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC---- 255
++ N +F LL C +S L++ R+ HG + ++ S +++D Y KC
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 256 ---ECLSE------------------------AKQIFHELPKKDIVSWTSIISGLVQCQR 288
C E A+++F E+P+K+ VSWT++I+G V+
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+L LFRKM + G++P+ +S L A A++ L +G+ +H Y+ R ++ + + ++
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 349 MVDMYAKCGCIERALQTFNEMPCKN--IFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
++DMY+K G +E + + F K+ +F WN +++ LA HG G+ AL+ ++M+
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
PN T + IL AC HSGLV++G ++F M + Q+ + P EHY C+ DLL RAG E +
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESM-TVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 467 MLVRTMPMAPDVLILGALLSACKDKG 492
+ MP PD I A+L C+ G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHG 495
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 205/470 (43%), Gaps = 73/470 (15%)
Query: 11 VLLDYIRRCNNLKSFKK---IHAQLVTSGIVR-NDLVVKRVVDFF---GKSVD------- 56
+L +++C + KS K+ IH L +G R N L+ ++ + GK +D
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 57 --------FVDFGCGFLKQ---CDWRV--SSFP------FNSLISSYAGSDRPQIAILCY 97
+ + G++K RV S P +N+++ YA A+ Y
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 98 RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC 157
++ R+G + ++F +L +C + Q HG V+ G + ++ + S++ Y C
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 158 DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF------------------- 198
SA + FDEM V+D+ WT++I+GYA+ G + A +F
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 199 ---------------LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+++ V+P TF S L +LR G+ IHG + + + +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 244 ASNALMDMYVKCECLSEAKQIFHEL-PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
++L+DMY K L ++++F K D V W ++IS L Q ++L + M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 303 GIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
++P+ L +L+AC++ G ++ G RW + I D ++D+ + GC +
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 362 ALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVG---EGSTP 407
++ EMP + + WNA+L +HG K +E++ E S P
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 160/398 (40%), Gaps = 79/398 (19%)
Query: 170 MPV-----RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATF---VSLLVGCGRSG 221
MP+ R + S ++ +A +AV+ S+ + F SLL CG +
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 222 NLRMGRRIHGLI----FKRASKVSLEASNALMDMYVKC-----EC--------------- 257
+L+ G+ IH + FKR + + SN L+ MY+KC C
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTL---LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWN 117
Query: 258 -----------LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
L A+ +F +P++D+VSW +++ G Q E+L +++ SGI+
Sbjct: 118 NMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF 177
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ +L+AC L R H + ++ + +++D YAKCG +E A + F
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 367 N-------------------------------EMPCKNIFTWNALLNGLAMHGRGYAALK 395
+ EMP KN +W AL+ G G G AL
Sbjct: 238 DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALD 297
Query: 396 FFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDL 455
F +M+ G P + TF + L A + G++ MI + N+ P + D+
Sbjct: 298 LFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI--RTNVRPNAIVISSLIDM 355
Query: 456 LCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGI 493
++G L+ + + R D + ++SA G+
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL 393
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 221/420 (52%), Gaps = 51/420 (12%)
Query: 114 AMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGK-------- 165
A+L+SC+ F + IHG +++ L+ D++V + L+ L C D + K
Sbjct: 17 ALLQSCSSFSDLK---IIHGFLLRTHLISDVFVASRLLAL---CVDDSTFNKPTNLLGYA 70
Query: 166 --VFDEMPVRDVVSWTSIIAGYARAGLFDEAV---TMFLSMNVEPNTATFVSLLVGCGRS 220
+F ++ ++ + +I ++ +A T L + P+ TF L+
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSII 280
+ +G + H I + + + N+L+ MY C ++ A +IF ++ +D+VSWTS++
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 281 SGLVQC-----------QRPKESLV--------------------LFRKMHSSGIEPDGV 309
+G +C + P +L LF M G+ +
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
++ SV+S+CA++G L++G +EY+ + + ++ +GTA+VDM+ +CG IE+A+ F +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 370 PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGR 429
P + +W++++ GLA+HG + A+ +F +M+ G P +VTF A+L+AC H GLV+KG
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 430 KYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ + M + + + PRLEHYGC+ D+L RAG L EA + M + P+ ILGALL ACK
Sbjct: 371 EIYENM-KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 194/416 (46%), Gaps = 45/416 (10%)
Query: 1 MSRIRLN---LKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDF------F 51
MS I LN K L ++ C++ K IH L+ + ++ + V R++ F
Sbjct: 1 MSNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTF 60
Query: 52 GKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYT 111
K + + + G Q + F FN LI ++ P A Y Q++++ PD+ T
Sbjct: 61 NKPTNLLGYAYGIFSQIQ-NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNIT 119
Query: 112 FPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP 171
FP ++K+ + + G Q H +++ G D+YV+NSLVH+Y C +AG++F +M
Sbjct: 120 FPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG 179
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSM------------------------------ 201
RDVVSWTS++AGY + G+ + A MF M
Sbjct: 180 FRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEF 239
Query: 202 ----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCEC 257
V N VS++ C G L G R + + K V+L AL+DM+ +C
Sbjct: 240 MKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGD 299
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+ +A +F LP+ D +SW+SII GL +++ F +M S G P V T+VLSA
Sbjct: 300 IEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Query: 318 CANVGDLDYGRWVHEYIDR-RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
C++ G ++ G ++E + + I+ + +VDM + G + A +M K
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 135/314 (42%), Gaps = 47/314 (14%)
Query: 202 NVEPNTATF----VSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK--- 254
N+ NT F ++LL C +L++ IHG + + + ++ L+ + V
Sbjct: 3 NIVLNTLRFKHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDST 59
Query: 255 ----CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
L A IF ++ ++ + +I P ++ + +M S I PD +
Sbjct: 60 FNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNIT 119
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA---------------- 354
++ A + + + G H I R + D+++ ++V MYA
Sbjct: 120 FPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG 179
Query: 355 ---------------KCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
KCG +E A + F+EMP +N+FTW+ ++NG A + A+ FE
Sbjct: 180 FRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEF 239
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M EG NE ++++++C H G ++ G + + ++ ++ L + D+ R
Sbjct: 240 MKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG--TALVDMFWRC 297
Query: 460 GLLDEALMLVRTMP 473
G +++A+ + +P
Sbjct: 298 GDIEKAIHVFEGLP 311
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 207/377 (54%), Gaps = 5/377 (1%)
Query: 115 MLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRD 174
+L S A +G+Q+HG V+K GL V N+L++ Y + + F++ P +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 175 VVSWTSIIAGYARAGL---FDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
+W+SII+ +A+ L E + ++ N+ P+ S C +GR +H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
L K + ++L+DMY KC + A+++F E+P++++V+W+ ++ G Q +E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD 351
+L LF++ + + +SV+S CAN L+ GR +H + + +G+++V
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 352 MYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
+Y+KCG E A Q FNE+P KN+ WNA+L A H ++ F+ M G PN +T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 412 FLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT 471
FL +L AC H+GLVD+GR YF+QM ++ + P +HY + D+L RAG L EAL ++
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQM--KESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 472 MPMAPDVLILGALLSAC 488
MP+ P + GALL++C
Sbjct: 379 MPIDPTESVWGALLTSC 395
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 212/396 (53%), Gaps = 11/396 (2%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+LL R + +K + +H +V SG+ LV +++F+ KS D F +
Sbjct: 21 LLLSSARTRSTIKGLQ-LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF--EDSP 77
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+ SS ++S+IS +A ++ P +++ ++++ PD + P+ KSCA+ G
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H + +K G D++V +SLV +Y C + A K+FDEMP R+VV+W+ ++ GYA+ G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 191 FDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+EA+ +F L N+ N +F S++ C S L +GR+IHGL K + S ++
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPD 307
L+ +Y KC A Q+F+E+P K++ W +++ Q ++ + LF++M SG++P+
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 308 GVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ +VL+AC++ G +D GR+ + + I+ ++VDM + G ++ AL+
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 368 EMPCKNIFT-WNALLNGLAMHGR----GYAALKFFE 398
MP + W ALL +H +AA K FE
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFE 413
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 242/476 (50%), Gaps = 12/476 (2%)
Query: 21 NLKSFKKIHAQLVTSG--IVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFN 78
+L + K+IHA+++ +G RN+ + ++V F+ K D ++ + R + F +
Sbjct: 85 DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAK-CDALEIAEVLFSKLRVR-NVFSWA 142
Query: 79 SLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM 138
++I + A++ + +++ N PD++ P + K+C G +HG V+K
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202
Query: 139 GLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF 198
GL ++V +SL +YG C A KVFDE+P R+ V+W +++ GY + G +EA+ +F
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 199 LSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC 255
M VEP T + L G + G++ H + ++ +L++ Y K
Sbjct: 263 SDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV 322
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
+ A+ +F + +KD+V+W IISG VQ ++++ + + M ++ D V L +++
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
SA A +L G+ V Y R + + DI + + ++DMYAKCG I A + F+ K++
Sbjct: 383 SAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Query: 376 TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
WN LL A G AL+ F M EG PN +T+ I+ + +G VD+ + F QM
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 436 ISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSAC 488
Q + P L + M + + + G +EA++ +R M + P+ + LSAC
Sbjct: 503 --QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 239/485 (49%), Gaps = 46/485 (9%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K+ HA + +G+ ++++ +++F+ K V +++ + + +N +IS Y
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCK-VGLIEYAEMVFDRM-FEKDVVTWNLIISGYV 351
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ AI + + D T ++ + A + G ++ I+ D+
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE- 204
+ ++++ +Y C A KVFD +D++ W +++A YA +GL EA+ +F M +E
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
PN T+ +++ R+G + EAK
Sbjct: 472 VPPNVITWNLIILSLLRNGQV-----------------------------------DEAK 496
Query: 263 QIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
+F ++ +++SWT++++G+VQ +E+++ RKM SG+ P+ +T LSAC
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 319 ANVGDLDYGRWVHEYIDRRAIKRD-IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
A++ L GR +H YI R + I T++VDMYAKCG I +A + F +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
NA+++ A++G A+ + + G G P+ +T +L+AC H+G +++ + F ++S
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLP 497
++ ++ P LEHYG M DLL AG ++AL L+ MP PD ++ +L+++C + +L
Sbjct: 677 KR-SMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 498 TRYTR 502
+R
Sbjct: 736 DYLSR 740
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 8/325 (2%)
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
S+ ++ + G EA+++ M N+ + +L GC +L G++IH
Sbjct: 36 TSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHAR 95
Query: 233 IFKRASKVSLEA--SNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPK 290
I K + L+ Y KC+ L A+ +F +L +++ SW +II + +
Sbjct: 96 ILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 291 ESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMV 350
+L+ F +M + I PD ++ +V AC + +GR VH Y+ + ++ + + +++
Sbjct: 156 GALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 351 DMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEV 410
DMY KCG ++ A + F+E+P +N WNAL+ G +G+ A++ F +M +G P V
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 411 TFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVR 470
T L+A + G V++G++ I L L + + C+ GL++ A M+
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT--SLLNFYCKVGLIEYAEMVFD 333
Query: 471 TMPMAPDVLILGALLSACKDKGILK 495
M DV+ ++S +G+++
Sbjct: 334 RM-FEKDVVTWNLIISGYVQQGLVE 357
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY-VQNSLV 151
AIL R++ +G P++++ L +CA + G IHG +I+ L ++ SLV
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 152 HLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTA 208
+Y C D A KVF ++ ++I+ YA G EA+ ++ S+ ++P+
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649
Query: 209 TFVSLLVGCGRSGNLRMGRRIH-GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
T ++L C +G++ I ++ KR+ K LE ++D+ +A ++ E
Sbjct: 650 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 709
Query: 268 LP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
+P K D S+++ + ++ + L RK+ S E G +T + +A A G D
Sbjct: 710 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT-ISNAYAVEGSWDE 768
Query: 327 GRWVHEYIDRRAIKR 341
+ E + + +K+
Sbjct: 769 VVKMREMMKAKGLKK 783
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 198/345 (57%), Gaps = 5/345 (1%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VE 204
N L++ Y D +A KVFDEMP R + +W ++IAG + +E +++F M+
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ T S+ G ++ +G++IHG K ++ L +++L MY++ L + + +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
+P +++V+W ++I G Q P+ L L++ M SG P+ + +VLS+C+++
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
G+ +H + + + ++++ MY+KCGC+ A + F+E ++ W+++++
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 385 AMHGRGYAALKFFEEMVGEGSTP-NEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLS 443
HG+G A++ F M + + NEV FL +L AC HSGL DKG + F+ M+ ++Y
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV-EKYGFK 327
Query: 444 PRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
P L+HY C+ DLL RAG LD+A ++R+MP+ D++I LLSAC
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 184/369 (49%), Gaps = 8/369 (2%)
Query: 39 RNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYR 98
+N + +++ + ++ D V+ F + D +++++ N++I+ + + + +R
Sbjct: 23 KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTW--NAMIAGLIQFEFNEEGLSLFR 80
Query: 99 QIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
++ GF PD YT ++ A + G QIHG IK GL DL V +SL H+Y
Sbjct: 81 EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNG 140
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLV 215
+ V MPVR++V+W ++I G A+ G + + ++ M + PN TFV++L
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVS 275
C G++IH K + + ++L+ MY KC CL +A + F E +D V
Sbjct: 201 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 260
Query: 276 WTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACANVGDLDYGRWVHE-Y 333
W+S+IS + E++ LF M + +E + V ++L AC++ G D G + +
Sbjct: 261 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 320
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYA 392
+++ K + T +VD+ + GC+++A MP K +I W LL+ +H
Sbjct: 321 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 380
Query: 393 ALKFFEEMV 401
A + F+E++
Sbjct: 381 AQRVFKEIL 389
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 112/204 (54%)
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
++ R K + +SN L++ YV+ L A+++F E+P + + +W ++I+GL+Q + +E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
L LFR+MH G PD L SV S A + + G+ +H Y + ++ D+ + +++ M
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
Y + G ++ MP +N+ WN L+ G A +G L ++ M G PN++TF
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195
Query: 413 LAILTACCHSGLVDKGRKYFNQMI 436
+ +L++C + +G++ + I
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAI 219
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 232/434 (53%), Gaps = 24/434 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ +LI+ Y + Q + ++ + F P+ +T ++L SC G Q+HG+ +
Sbjct: 130 WTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY----EPGKQVHGLAL 184
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGK---VFDEMPVRDVVSWTSIIAGYARAGLFDE 193
K+GL C +YV N+++ +YG C D +A + VF+ + +++V+W S+IA + L +
Sbjct: 185 KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKK 244
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGR------RIHGLIFKRASKVSLEA 244
A+ +F+ M+ V + AT +++ +S +L ++H L K E
Sbjct: 245 AIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEV 304
Query: 245 SNALMDMYVK-CECLSEAKQIFHELPK-KDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
+ AL+ +Y + E ++ ++F E+ +DIV+W II+ P+ ++ LF ++
Sbjct: 305 ATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFGQLRQE 363
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
+ PD +SVL ACA + + +H + + D + +++ YAKCG ++
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
++ F++M +++ +WN++L ++HG+ + L F++M P+ TF+A+L+AC H+
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHA 480
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILG 482
G V++G + F M + L P+L HY C+ D+L RA EA +++ MPM PD ++
Sbjct: 481 GRVEEGLRIFRSMFEKPETL-PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWI 539
Query: 483 ALLSACKDKGILKL 496
ALL +C+ G +L
Sbjct: 540 ALLGSCRKHGNTRL 553
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 138/257 (53%), Gaps = 5/257 (1%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSV-DFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
++H+ V SG+V V ++ + + + D+ D F++ R +N +I+++A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR-DIVAWNGIITAFA 346
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
D P+ AI + Q+ + PD YTF ++LK+CA + + IH VIK G + D
Sbjct: 347 VYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP 205
+ NSL+H Y C +VFD+M RDVVSW S++ Y+ G D + +F M++ P
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINP 465
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV-SLEASNALMDMYVKCECLSEAKQI 264
++ATF++LL C +G + G RI +F++ + L ++DM + E +EA+++
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 265 FHELP-KKDIVSWTSII 280
++P D V W +++
Sbjct: 526 IKQMPMDPDAVVWIALL 542
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 194/441 (43%), Gaps = 49/441 (11%)
Query: 106 LPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVC--DLYVQNSLVHLYGVCDDCRSA 163
L + A+ ++CA + +G+ +H ++ ++ + N L+++Y C + A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM--NVEPNTATFVSLLVGCGRSG 221
+VFD MP R+VVSWT++I GY +AG E +F SM + PN T S+L C
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC---- 171
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE---CLSEAKQIFHELPKKDIVSWTS 278
G+++HGL K S+ +NA++ MY +C EA +F + K++V+W S
Sbjct: 172 RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR------WVHE 332
+I+ C K+++ +F +MHS G+ D L ++ S+ DL +H
Sbjct: 232 MIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHS 291
Query: 333 YIDRRAIKRDIHIGTAMVDMYAK-CGCIERALQTFNEMP-CKNIFTWNALLNGLAMHGRG 390
+ + + TA++ +Y++ + F EM C++I WN ++ A++
Sbjct: 292 LTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE 351
Query: 391 YAALKFFEEMVGEGSTPNEVTFLAILTACC-----------HSGLVDKG---RKYFNQMI 436
A+ F ++ E +P+ TF ++L AC H+ ++ G N +
Sbjct: 352 -RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 437 SQQYNLSPRLE---------------HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
Y L+ + M G +D L + + M + PD
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATF 470
Query: 482 GALLSACKDKGILKLPTRYTR 502
ALLSAC G ++ R R
Sbjct: 471 IALLSACSHAGRVEEGLRIFR 491
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 199/355 (56%), Gaps = 9/355 (2%)
Query: 141 VCDLYVQNSLVHLY---GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
V D NS+VH Y G DD A K+F +MP ++V+SWT++I G + EA+ +
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDD---ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 198 FLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F +M ++ + F ++ C + MG ++HGLI K S +L+ Y
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 255 CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
C+ + +++++F E + + WT+++SG ++ +++L +F M + I P+ S
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI 374
L++C+ +G LD+G+ +H + ++ D +G ++V MY+ G + A+ F ++ K+I
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 375 FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQ 434
+WN+++ G A HGRG A F +M+ P+E+TF +L+AC H G ++KGRK F
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 435 MISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
M S ++ +++HY CM D+L R G L EA L+ M + P+ ++ ALLSAC+
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACR 507
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 164/317 (51%), Gaps = 6/317 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ ++I ++R A+ ++ ++R S F ++ +CA G+Q+HG++I
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
K+G + + YV SL+ Y C + KVFDE V WT++++GY+ ++A++
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+F M ++ PN +TF S L C G L G+ +HG+ K + N+L+ MY
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
+++A +F ++ KK IVSW SII G Q R K + V+F +M EPD + T
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 314 VLSACANVGDLDYGRWVHEYIDR--RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
+LSAC++ G L+ GR + Y+ I R I T MVD+ +CG ++ A + M
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 372 K-NIFTWNALLNGLAMH 387
K N W ALL+ MH
Sbjct: 493 KPNEMVWLALLSACRMH 509
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 144/268 (53%), Gaps = 5/268 (1%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGN 222
A +FDEMPVRDVVSW S+I+G G + AV +F M E + ++ +++ GC RSG
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP-ERSVVSWTAMVNGCFRSGK 143
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
+ R +F + A N+++ Y++ + +A ++F ++P K+++SWT++I G
Sbjct: 144 VDQAER----LFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
L Q +R E+L LF+ M I+ T V++ACAN G VH I + +
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
++ +++ YA C I + + F+E + + W ALL+G +++ + AL F M+
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRK 430
PN+ TF + L +C G +D G++
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKE 347
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 40/319 (12%)
Query: 16 IRRCNNLKSFK---KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
I C N +F ++H ++ G + + V ++ F+ D F ++ +V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
+ + +L+S Y+ + + + A+ + ++RN LP+ TF + L SC+ + G ++H
Sbjct: 292 A--VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
G+ +K+GL D +V NSLV +Y + A VF ++ + +VSW SII G A+ G
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 193 EAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F + +N EP+ TF LL C G L GR+ L + +S ++
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK---LFYYMSSGIN-------- 458
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
+ +K I +T ++ L +C + KE+ L +M ++P+ +
Sbjct: 459 -----------------HIDRK-IQHYTCMVDILGRCGKLKEAEELIERM---VVKPNEM 497
Query: 310 ILTSVLSACANVGDLDYGR 328
+ ++LSAC D+D G
Sbjct: 498 VWLALLSACRMHSDVDRGE 516
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 222 NLRMGRRIHGL--IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
N + RRI +F + + ++ Y + L +A +F E+P +D+VSW S+
Sbjct: 44 NHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSM 103
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ISG V+C ++ LF +M + V T++++ C G +D E + +
Sbjct: 104 ISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQA----ERLFYQMP 155
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+D +MV Y + G ++ AL+ F +MP KN+ +W ++ GL + R AL F+
Sbjct: 156 VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 400 MVGEGSTPNEVTFLAILTACCHS 422
M+ F ++TAC ++
Sbjct: 216 MLRCCIKSTSRPFTCVITACANA 238
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 229 IHGLIFKRAS-KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQ 287
IHG ++ S V + L+ ++ + EA+++F+++P + +T +I+G +
Sbjct: 21 IHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSN 80
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGT 347
R ++L LF +M D V S++S C GD++ + + + R++ T
Sbjct: 81 RLVDALNLFDEMPVR----DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVS----WT 132
Query: 348 AMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
AMV+ + G +++A + F +MP K+ WN++++G G+ ALK F++M G+
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 114/296 (38%), Gaps = 46/296 (15%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K++H V G+ + V +V + S + D F+K ++ S +NS+I A
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI--FKKSIVSWNSIIVGCA 403
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
R + A + + Q++R PD TF +L +C+ H ++ G Y
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS-----------HCGFLEKGRKLFYY 452
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEP 205
+ + + H+ R + +T ++ R G EA + M V+P
Sbjct: 453 MSSGINHID------------------RKIQHYTCMVDILGRCGKLKEAEELIERMVVKP 494
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
N +++LL C ++ G + IF SK S A L ++Y S ++
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSS-AAYVLLSNIYASAGRWSNVSKLR 553
Query: 266 HELPKKDIV-----SWTSI-------ISG-LVQCQRPKESLVLFR-KMHSSGIEPD 307
++ K I+ SW I SG C R E L R K+ G PD
Sbjct: 554 VKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPD 609
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 207/398 (52%), Gaps = 40/398 (10%)
Query: 116 LKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDV 175
L++C+ F + QIH +IK L D + L+ + + + A VF+++
Sbjct: 27 LRTCSNF---SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTA----TFVSLLVGCGRSGNLRMGRRIHG 231
+W +I + EA+ +F+ M + + TF ++ C S ++R+G ++HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 232 LIFKRASKVSLEASNALMDMYVKC-------------------------------ECLSE 260
L K + N LMD+Y KC L
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A+ +F+++P +++VSWT++I+ V+ +RP E+ LFR+M ++P+ + ++L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
+G L GRWVH+Y + D +GTA++DMY+KCG ++ A + F+ M K++ TWN++
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
+ L +HG G AL FEEM E S P+ +TF+ +L+AC ++G V G +YF +MI Q
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI-QV 382
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
Y +SP EH CM LL +A +++A LV +M PD
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 184/385 (47%), Gaps = 39/385 (10%)
Query: 15 YIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSS 74
++R C+N K+IH +++ + + L+V++++ S + Q S+
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISV-SSSFGETQYASLVFNQLQ-SPST 83
Query: 75 FPFNSLISSYAGSDRPQIAILCY-RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
F +N +I S + + +P+ A+L + ++ + D +TFP ++K+C I G Q+HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD------------------------- 168
+ IK G D++ QN+L+ LY C S KVFD
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 169 ------EMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
+MP+R+VVSWT++I Y + DEA +F M +V+PN T V+LL +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
G+L MGR +H K + AL+DMY KC L +A+++F + K + +W S+
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 280 ISGLVQCQRPKESLVLF-RKMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRR 337
I+ L +E+L LF + +EPD + VLSACAN G++ G R+ I
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERA 362
I M+ + + +E+A
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKA 408
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 210/421 (49%), Gaps = 34/421 (8%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F + ++IS + A+ +R++ G +P++ T + + +C+ I +G ++H I
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
+KMG + D+ V NSLV +Y C A KVFD + +DV +W S+I GY +AG +A
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 195 VTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+F M N+ PN T+ +++ G ++G+ MD+
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGD----------------------EGEAMDL 475
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
+ + E + + ++ +W II+G +Q + E+L LFRKM S P+ V +
Sbjct: 476 FQRMEKDGKVQ--------RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
S+L ACAN+ R +H + RR + + A+ D YAK G IE + F M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
K+I TWN+L+ G +HG AL F +M +G TPN T +I+ A G VD+G+K
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
F I+ Y++ P LEH M L RA L+EAL ++ M + + I + L+ C+
Sbjct: 648 FYS-IANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706
Query: 492 G 492
G
Sbjct: 707 G 707
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 204/422 (48%), Gaps = 38/422 (9%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F ++++I +Y+ +R + +R ++++G LPD + FP +L+ CA + G IH +
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
VIK+G+ L V NS++ +Y C + A K F M RDV++W S++ Y + G +EA
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 195 VTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
V + M E P T+ L+ G + G +A MD+
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGK----------------------CDAAMDL 304
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
K E +F +WT++ISGL+ ++L +FRKM +G+ P+ V +
Sbjct: 305 MQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
S +SAC+ + ++ G VH + D+ +G ++VDMY+KCG +E A + F+ +
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
K+++TWN+++ G G A + F M PN +T+ +++ +G +
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSAC 488
F +M + + + + + G DEAL L R M + P+ + + +LL AC
Sbjct: 476 FQRM-EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Query: 489 KD 490
+
Sbjct: 535 AN 536
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 154/325 (47%), Gaps = 39/325 (12%)
Query: 111 TFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVC--DLYVQNSLVHLYGVCDDCRSAGKVFD 168
T+ +L+SC I G +H + GL D++V+ L+ +Y C A KVFD
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 169 EMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRM 225
M R++ +W+++I Y+R + E +F M V P+ F +L GC G++
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 226 GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ 285
G+ IH ++ K L SN+++ +Y KC L A + F + ++D+++W S++ Q
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 286 CQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHI 345
+ +E++ L ++M GI P V ++ +G D
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD-------------------- 299
Query: 346 GTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS 405
A +D+ K ++TF ++FTW A+++GL +G Y AL F +M G
Sbjct: 300 --AAMDLMQK-------METFG--ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 406 TPNEVTFLAILTACCHSGLVDKGRK 430
PN VT ++ ++AC ++++G +
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSE 373
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 154/300 (51%), Gaps = 6/300 (2%)
Query: 192 DEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
++A+ + +T++ LL C SG++ +GR +H F ++ + L+ M
Sbjct: 66 EKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSM 124
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y KC C+++A+++F + ++++ +W+++I + R +E LFR M G+ PD +
Sbjct: 125 YAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLF 184
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
+L CAN GD++ G+ +H + + + + + +++ +YAKCG ++ A + F M
Sbjct: 185 PKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE 244
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+++ WN++L +G+ A++ +EM EG +P VT+ ++ G D
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSAC 488
+M + + ++ + + M L G+ +AL + R M +A P+ + + + +SAC
Sbjct: 305 MQKM--ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 234/502 (46%), Gaps = 49/502 (9%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K++H G+ VV ++ +GK + F W + S+ N++I + A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW--NAIICATA 292
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
S+ P A+ + + +GF P+ T+ ++L ++ + G QIHG++IK G +
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM-----FLS 200
+ N+L+ Y C + + FD + +++V W ++++GYA D + + L
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK---DGPICLSLFLQMLQ 409
Query: 201 MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
M P TF + L C + +++H +I + + + ++LM Y K + +++
Sbjct: 410 MGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMND 465
Query: 261 A-------------------------KQIFHE-------LPKKDIVSWTSIISGLVQCQR 288
A + +HE L + D VSW I+ +
Sbjct: 466 ALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDY 525
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK-RDIHIGT 347
+E + LF+ M S I PD S+LS C+ + DL G +H I + D +
Sbjct: 526 HEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCN 585
Query: 348 AMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTP 407
++DMY KCG I ++ F E KN+ TW AL++ L +HG G AL+ F+E + G P
Sbjct: 586 VLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKP 645
Query: 408 NEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALM 467
+ V+F++ILTAC H G+V +G F +M + Y + P ++HY C DLL R G L EA
Sbjct: 646 DRVSFISILTACRHGGMVKEGMGLFQKM--KDYGVEPEMDHYRCAVDLLARNGYLKEAEH 703
Query: 468 LVRTMPMAPDVLILGALLSACK 489
L+R MP D + L C
Sbjct: 704 LIREMPFPADAPVWRTFLDGCN 725
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 235/515 (45%), Gaps = 35/515 (6%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVT--SGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCD 69
LL+ R+ + K +HA +T S +++ V ++ + K + V Q
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEK-LGEVSLAGKVFDQMP 76
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
R + FN++I Y+ A + ++ G+LP+ T +L SCA L + G
Sbjct: 77 ER-NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCAS-LDVRAGT 133
Query: 130 QIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
Q+HG+ +K GL + D +V L+ LYG D A +VF++MP + + +W +++
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 189 GLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G E + F + M ++F+ +L G +L + +++H K+ +
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
N+L+ Y KC A+++F + DIVSW +II + + P ++L LF M G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
P+ SVL + V L GR +H + + + I +G A++D YAKCG +E +
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC----- 420
F+ + KNI WNALL+G A + G L F +M+ G P E TF L +CC
Sbjct: 374 FDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
Query: 421 --HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDV 478
HS +V G + Y LS + Y + L+++AL+L+ V
Sbjct: 433 QLHSVIVRMGYE------DNDYVLSSLMRSYA-------KNQLMNDALLLLDWASGPTSV 479
Query: 479 LILGALLSACKDKG----ILKLPTRYTRPPHRAWD 509
+ L + +G +KL + +P +W+
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWN 514
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 219/454 (48%), Gaps = 78/454 (17%)
Query: 108 DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF 167
D ++ AM+K G+ E + G + + +V S+V+ Y D R A ++F
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLF 254
Query: 168 DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-----VEPNTATFVSLLVGCGRSGN 222
EMP R++VSWT++I+G+A L+ EA+ +FL M V PN T +SL CG G
Sbjct: 255 CEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Query: 223 --LRMGRRIH----------------------------GLIFKRASKVS----LEASNAL 248
R+G ++H GLI S ++ L++ N +
Sbjct: 315 EFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNII 374
Query: 249 MDMYVKCECLSEAKQ--------------------------------IFHELPKKDIVSW 276
++ Y+K L A+ +F +L KD V+W
Sbjct: 375 INRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTW 434
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
T +ISGLVQ + E+ L M G++P + +LS+ +LD G+ +H I +
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Query: 337 RAI--KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
D+ + ++V MYAKCG IE A + F +M K+ +WN+++ GL+ HG AL
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKAL 554
Query: 395 KFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
F+EM+ G PN VTFL +L+AC HSGL+ +G + F M + Y++ P ++HY M D
Sbjct: 555 NLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM-KETYSIQPGIDHYISMID 613
Query: 455 LLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
LL RAG L EA + +P PD + GALL C
Sbjct: 614 LLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 150/295 (50%), Gaps = 21/295 (7%)
Query: 151 VHLYGVCDDCRS--AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTA 208
V L +CDD RS A ++FDEMP R+VVSW +++ G R G ++A +F +M +
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-DVV 201
Query: 209 TFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL 268
++ +++ G + + + L+F S+ ++ +++ Y + + EA ++F E+
Sbjct: 202 SWNAMIKGYIENDGMEEAK----LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 269 PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS--SGIEPDGVILTSVLSACANVGDLDY 326
P+++IVSWT++ISG + +E+L+LF +M + P+G L S+ AC +G +++
Sbjct: 258 PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEF 316
Query: 327 ---GRWVHEYI---DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
G +H + + D + ++V MYA G I A NE ++ + N +
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNII 374
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+N +G A FE + S ++V++ +++ +G V + F ++
Sbjct: 375 INRYLKNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 84/349 (24%)
Query: 163 AGKVFDEMPVRD----VVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCG 218
A + D++P R VV WTS+++ YA+ G DEA +F M E N T
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-ERNIVT--------- 110
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
NA++ YVKC ++EA +F E+P K++VSWT
Sbjct: 111 --------------------------CNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTV 143
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA 338
+++ L R ++++ LF +M E + V ++++ GD++ + V + + R
Sbjct: 144 MLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 339 I---------------------------KRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
+ ++++ T+MV Y + G + A + F EMP
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVG--EGSTPNEVTFLAILTACCHSGLVDK-- 427
+NI +W A+++G A + AL F EM + +PN T +++ AC G+ +
Sbjct: 260 RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL 319
Query: 428 GRKYFNQMISQQYN-------LSPRLEHYGCMTDLLCRA-GLLDEALML 468
G + Q+IS + L+ L H + L+ A LL+E+ L
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL 368
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 30/282 (10%)
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
G L R + I +R S + +L+ Y K L EA+ +F +P+++IV+ ++
Sbjct: 55 EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAM 114
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL--SACANVGDLDYGRWVHEYIDRR 337
++G V+C+R E+ LFR+M P V+ +V+ + C + D E +R
Sbjct: 115 LTGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNG-LAMHGRGYAALKF 396
+ + +V + G +E+A Q F+ MP +++ +WNA++ G + G A L F
Sbjct: 169 VVSWN-----TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
G+ S N VT+ +++ C G V + + F +M + + + M
Sbjct: 224 -----GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN------IVSWTAMISGF 272
Query: 457 CRAGLLDEALMLVRTM-----PMAPDVLILGALLSACKDKGI 493
L EALML M ++P+ L +L AC G+
Sbjct: 273 AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 205/411 (49%), Gaps = 41/411 (9%)
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR 187
G +IH +IK G DL + L+ L+ C A +VFDE+P + ++ +I+GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 188 AGLFDEAVTMFLSMNVEPNTATFVSLLV----GCGRSGNLRMGRRIHGLIFKRASKVSLE 243
GL E + + M+ A +L + R + + R + L+ R K +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 244 ASN----ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQ-------------- 285
+ AL+D YVK L A+ +F + +++V TS+ISG +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 286 ------------------CQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ K S+ ++ M +G P+ SV+ AC+ + + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
+ VH I + + I +G++++DMYAKCG I A + F++M KN+F+W ++++G +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G AL+ F M PN VTFL L+AC HSGLVDKG + F M + Y++ P++E
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM-QRDYSMKPKME 411
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPT 498
HY C+ DL+ RAG L++A R MP PD I ALLS+C G ++L +
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 58/415 (13%)
Query: 23 KSFKKIHAQLVTSGIVRN-DLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP----- 76
K+ KKIHA ++ +G + ++ +K ++ + CG L P
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLI---------LHLKCGCLSYARQVFDELPKPTLS 101
Query: 77 -FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSC-----AMFLGIGEGMQ 130
+N +IS Y + +L +++ +G D YT +LK+ M L
Sbjct: 102 AYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRL 161
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+H +IK + D + +LV Y SA VF+ M +VV TS+I+GY G
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 191 FDEA--------------------------------VTMFLSMN---VEPNTATFVSLLV 215
++A V M++SM PN +TF S++
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 216 GCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVS 275
C + +G+++H I K ++ ++L+DMY KC +++A+++F ++ +K++ S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
WTS+I G + P+E+L LF +M IEP+ V LSAC++ G +D G + E +
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Query: 336 RR-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
R ++K + +VD+ + G + +A + MP + + W ALL+ +HG
Sbjct: 402 RDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 144/346 (41%), Gaps = 81/346 (23%)
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
+ G++IH I K + L S L+ +++KC CLS A+Q+F ELPK + ++ +ISG
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL-----DYGRWVHEYIDRRA 338
++ KE L+L ++M SG + DG L+ VL A + G R VH I +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 339 IKRDIHIGTAMVDMYAKC-------------------------------GCIERALQTFN 367
++ D + TA+VD Y K G +E A + FN
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 368 EMPCKNIFTWNALLNGLAMHGR-GYAALKFFEEMVGEGSTPNEVTFLAILTACC------ 420
K+I +NA++ G + G ++ + M G PN TF +++ AC
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 421 -----HS------------------------GLVDKGRKYFNQMISQQYNLSPRLEHYGC 451
H+ G ++ R+ F+QM Q+ N+ +
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM--QEKNVFS----WTS 344
Query: 452 MTDLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSACKDKGIL 494
M D + G +EAL L M + P+ + LSAC G++
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLV 390
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 196/364 (53%), Gaps = 9/364 (2%)
Query: 151 VHLYGVC---DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVE 204
+ + G C D + ++F +P V +W ++++GY+ ++EA++ F M N++
Sbjct: 320 ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 379
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ T +L C R L G++IHG++ + + + L+ +Y +CE + ++ I
Sbjct: 380 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 439
Query: 265 FHE-LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE-PDGVILTSVLSACANVG 322
F + + + DI W S+ISG ++L+LFR+MH + + P+ +VLS+C+ +
Sbjct: 440 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 499
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
L +GR H + + D + TA+ DMY KCG I+ A Q F+ + KN WN +++
Sbjct: 500 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 559
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
G +GRG A+ + +M+ G P+ +TF+++LTAC HSGLV+ G + + M + + +
Sbjct: 560 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM-QRIHGI 618
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
P L+HY C+ D L RAG L++A L P ++ LLS+C+ G + L R
Sbjct: 619 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 678
Query: 503 PPHR 506
R
Sbjct: 679 KLMR 682
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 196/401 (48%), Gaps = 26/401 (6%)
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
G D+Y +L +++ G+G + +M V D+Y N+ + D A
Sbjct: 2 GMKSDTYLCNRLLD---LYIECGDGDYARKVFDEMS-VRDVYSWNAFLTFRCKVGDLGEA 57
Query: 164 GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRS 220
+VFD MP RDVVSW ++I+ R G ++A+ ++ M + P+ T S+L C +
Sbjct: 58 CEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV 117
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE-AKQIFHELPKKDIVSWTSI 279
+ G R HG+ K ++ NAL+ MY KC + + ++F L + + VS+T++
Sbjct: 118 LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAV 177
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS------ACANVGDL---DYGRWV 330
I GL + + E++ +FR M G++ D V L+++LS C ++ ++ + G+ +
Sbjct: 178 IGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 237
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
H R D+H+ +++++YAK + A F EMP N+ +WN ++ G R
Sbjct: 238 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 297
Query: 391 YAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYG 450
+++F M G PNEVT +++L AC SG V+ GR+ F+ + P + +
Sbjct: 298 DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP------QPSVSAWN 351
Query: 451 CMTDLLCRAGLLDEALMLVRTMP---MAPDVLILGALLSAC 488
M +EA+ R M + PD L +LS+C
Sbjct: 352 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 392
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 169/333 (50%), Gaps = 7/333 (2%)
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N+++S Y+ + + AI +RQ+ PD T +L SCA + G QIHG+V
Sbjct: 349 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 408
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE-MPVRDVVSWTSIIAGYARAGLFDEA 194
I+ + + ++ + L+ +Y C+ + +FD+ + D+ W S+I+G+ L +A
Sbjct: 409 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 468
Query: 195 VTMFLSMNVE----PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
+ +F M+ PN +F ++L C R +L GR+ HGL+ K AL D
Sbjct: 469 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTD 528
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY KC + A+Q F + +K+ V W +I G R E++ L+RKM SSG +PDG+
Sbjct: 529 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 588
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDR-RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
SVL+AC++ G ++ G + + R I+ ++ +VD + G +E A +
Sbjct: 589 FVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEAT 648
Query: 370 PCK-NIFTWNALLNGLAMHGRGYAALKFFEEMV 401
P K + W LL+ +HG A + E+++
Sbjct: 649 PYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM 681
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 212/459 (46%), Gaps = 82/459 (17%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N++IS + A++ Y+++V +GFLP +T ++L +C+ L GM+ HG+ +
Sbjct: 72 WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAV 131
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAG-KVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
K GL +++V N+L+ +Y C G +VF+ + + VS+T++I G AR EAV
Sbjct: 132 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 191
Query: 196 TMFLSM---NVEPNTATFVSLLV------GCGRSGNL---RMGRRIHGLIFKRASKVSLE 243
MF M V+ ++ ++L GC + +G++IH L + L
Sbjct: 192 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLH 251
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+N+L+++Y K + ++ A+ IF E+P+ ++VSW +I G Q R +S+ +M SG
Sbjct: 252 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG 311
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+P+ V SVL AC GD++ GR
Sbjct: 312 FQPNEVTCISVLGACFRSGDVETGR----------------------------------- 336
Query: 364 QTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
+ F+ +P ++ WNA+L+G + + A+ F +M + P++ T IL++C
Sbjct: 337 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 396
Query: 424 LVDKGRKYFNQMISQQ--------------YNLSPRLEHYGCM-------TDLLC----- 457
++ G++ +I + Y+ ++E C+ D+ C
Sbjct: 397 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 456
Query: 458 ---RAGLLD-EALMLVRTMP----MAPDVLILGALLSAC 488
R +LD +AL+L R M + P+ +LS+C
Sbjct: 457 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 495
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
V+L R L+ K+IH ++ + I +N +V ++ + + C F C
Sbjct: 387 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF-DDCIN 445
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGM 129
+ +NS+IS + + A++ +R++ + L P+ +F +L SC+ + G
Sbjct: 446 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 505
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
Q HG+V+K G V D +V+ +L +Y C + SA + FD + ++ V W +I GY G
Sbjct: 506 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 565
Query: 190 LFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMG-------RRIHGLIFKRASK 239
DEAV ++ +S +P+ TFVS+L C SG + G +RIHG+ +
Sbjct: 566 RGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI------E 619
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIIS 281
L+ ++D + L +A+++ P K V W ++S
Sbjct: 620 PELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 662
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 48/390 (12%)
Query: 150 LVHLYGVCDDCRS---AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---V 203
L H +C + A +VF + +V+ + ++I Y+ G E+++ F SM +
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 204 EPNTATFVSLLVGCGRSGNLRMGRRIHGLI----FKRASKVSLEASNALMDMYVKCECLS 259
+ T+ LL C +LR G+ +HG + F R K+ + ++++Y +
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI----GVVELYTSGGRMG 154
Query: 260 EAKQIFHELPKKD-------------------------------IVSWTSIISGLVQCQR 288
+A+++F E+ +++ IVSW S+IS L +C R
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD-IHIGT 347
+E+L LF +M G +PD + +VL A++G LD G+W+H + + +D I +G
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 348 AMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-T 406
A+VD Y K G +E A F +M +N+ +WN L++G A++G+G + F+ M+ EG
Sbjct: 275 ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
PNE TFL +L C ++G V++G + F M+ +++ L R EHYG M DL+ R+G + EA
Sbjct: 335 PNEATFLGVLACCSYTGQVERGEELFGLMM-ERFKLEARTEHYGAMVDLMSRSGRITEAF 393
Query: 467 MLVRTMPMAPDVLILGALLSACKDKGILKL 496
++ MP+ + + G+LLSAC+ G +KL
Sbjct: 394 KFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 175/425 (41%), Gaps = 60/425 (14%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
LL + N +IHA L+ + ++L++ + CG L D+
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISI-----------CGSLSNSDYA 55
Query: 72 VSSFP---------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
F FN++I Y+ P ++ + + G D YT+ +LKSC+
Sbjct: 56 NRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSL 115
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDV------- 175
+ G +HG +I+ G ++ +V LY A KVFDEM R+V
Sbjct: 116 SDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMI 175
Query: 176 ------------------------VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTA 208
VSW S+I+ ++ G EA+ +F M +P+ A
Sbjct: 176 RGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEA 235
Query: 209 TFVSLLVGCGRSGNLRMGRRIHGLIFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHE 267
T V++L G L G+ IH K + NAL+D Y K L A IF +
Sbjct: 236 TVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG-IEPDGVILTSVLSACANVGDLDY 326
+ ++++VSW ++ISG + + + LF M G + P+ VL+ C+ G ++
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 327 GRWVHEYIDRR--AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNG 383
G + + R R H G AMVD+ ++ G I A + MP N W +LL+
Sbjct: 356 GEELFGLMMERFKLEARTEHYG-AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 384 LAMHG 388
HG
Sbjct: 415 CRSHG 419
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 175/303 (57%), Gaps = 7/303 (2%)
Query: 196 TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKC 255
+ F E ++ +L+ + G L RR+ F SK + NA++ Y +
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRV----FDEMSKRDVPVWNAMITGYQRR 161
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILTSV 314
+ A ++F +P+K++ SWT++ISG Q E+L +F M ++P+ + + SV
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM-PCKN 373
L ACAN+G+L+ GR + Y +I++ A ++MY+KCG I+ A + F E+ +N
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
+ +WN+++ LA HG+ AL F +M+ EG P+ VTF+ +L AC H G+V KG++ F
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGI 493
M + + +SP+LEHYGCM DLL R G L EA L++TMPM PD ++ G LL AC G
Sbjct: 342 SM-EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Query: 494 LKL 496
+++
Sbjct: 401 VEI 403
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 181/410 (44%), Gaps = 54/410 (13%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVV-----DFFGKSVDFVDFGCGFLKQCDWRVSSFP 76
+ K++HA + +G+ +++R++ + K D C FL
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFL----------- 49
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N LI +Y +P +I+ Y + +G P +TF + + A F +H
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM-------------------------- 170
+ G D + +L+ Y A +VFDEM
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 171 -----PVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSG 221
P ++V SWT++I+G+++ G + EA+ MFL M +V+PN T VS+L C G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL-PKKDIVSWTSII 280
L +GRR+ G + ++ NA ++MY KC + AK++F EL ++++ SW S+I
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 281 SGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR-RAI 339
L + E+L LF +M G +PD V +L AC + G + G+ + + ++ I
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
+ M+D+ + G ++ A MP K + W LL + HG
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 65/299 (21%)
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A+++F + +I +P ES+VL+ + G+ P + +A A+
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
R +H R + D T ++ YAK G + A + F+EM +++ WNA+
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGST--------------------------------PN 408
+ G G AA++ F+ M + T PN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 409 EVTFLAILTACCHSGLVDKGRK---------YFN---------QMISQ--QYNLSPRL-E 447
+T +++L AC + G ++ GR+ +F+ +M S+ +++ RL E
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 448 HYGCMTDL---------LCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGIL 494
G +L L G DEAL L M PD + LL AC G++
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMV 333
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 205/380 (53%), Gaps = 24/380 (6%)
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS-AGKVFDEMPVRDVVSWTSIIAG---- 184
QIH +I +GL Y + L+HL C S A + ++P V + ++I+
Sbjct: 27 QIHAQIITIGLSHHTYPLSKLLHLSSTV--CLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 185 ------YARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNL-RMGRRIHGLIFKRA 237
+ L+D+ ++ S V PN T+ SL G R GR +H + K
Sbjct: 85 HNSTQTHLAFSLYDQILSS-RSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFL 143
Query: 238 SKVSLE--ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR---PKES 292
V+ + AL+ Y C L EA+ +F + + D+ +W ++++ + +E
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEV 203
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
L+LF +M + P+ + L +++ +CAN+G+ G W H Y+ + + + +GT+++D+
Sbjct: 204 LLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDL 260
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
Y+KCGC+ A + F+EM +++ +NA++ GLA+HG G ++ ++ ++ +G P+ TF
Sbjct: 261 YSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATF 320
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ ++AC HSGLVD+G + FN M Y + P++EHYGC+ DLL R+G L+EA ++ M
Sbjct: 321 VVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
Query: 473 PMAPDVLILGALLSACKDKG 492
P+ P+ + + L + + G
Sbjct: 380 PVKPNATLWRSFLGSSQTHG 399
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 201/410 (49%), Gaps = 20/410 (4%)
Query: 13 LDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
L+ I +C +L++ K+IHAQ++T G+ + + +++ S + + L+Q
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL--SSTVCLSYALSILRQIP-NP 69
Query: 73 SSFPFNSLISSYA---GSDRPQIAILCYRQIV--RNGFL-PDSYTFPAMLKSC---AMFL 123
S F +N+LISS S + +A Y QI+ R+ F+ P+ +T+P++ K+ A +
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
G + H + + D +VQ +LV Y C R A +F+ + D+ +W +++A
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLA 189
Query: 184 GYARAGLFD---EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
YA + D E + +F+ M V PN + V+L+ C G G H + K +
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTL 249
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
+ +L+D+Y KC CLS A+++F E+ ++D+ + ++I GL +E + L++ +
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR-RAIKRDIHIGTAMVDMYAKCGCI 359
S G+ PD +SAC++ G +D G + + I+ + +VD+ + G +
Sbjct: 310 SQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRL 369
Query: 360 ERALQTFNEMPCK-NIFTWNALLNGLAMHG---RGYAALKFFEEMVGEGS 405
E A + +MP K N W + L HG RG ALK + E S
Sbjct: 370 EEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENS 419
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 199/350 (56%), Gaps = 11/350 (3%)
Query: 143 DLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLS 200
D + S++H G+C + R A ++FDEM R V++WT+++ GY + D+A +F
Sbjct: 171 DNIARTSMIH--GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 201 MNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
M E ++ S+L+G ++G + + F+ + A NA++ + +++
Sbjct: 229 MP-EKTEVSWTSMLMGYVQNGRIEDAEEL----FEVMPVKPVIACNAMISGLGQKGEIAK 283
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
A+++F + +++ SW ++I + E+L LF M G+ P L S+LS CA+
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
+ L +G+ VH + R D+++ + ++ MY KCG + ++ F+ P K+I WN++
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
++G A HG G ALK F EM GST PNEVTF+A L+AC ++G+V++G K + M S
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES-V 462
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+ + P HY CM D+L RAG +EA+ ++ +M + PD + G+LL AC+
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR 512
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 163/346 (47%), Gaps = 16/346 (4%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNT 207
N LV Y + A KVFD MP R+VVSWT+++ GY G D A ++F M E N
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP-EKNK 141
Query: 208 ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
++ +L+G + G + +++ +I + + A +++ K + EA++IF E
Sbjct: 142 VSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI----ARTSMIHGLCKEGRVDEAREIFDE 197
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ ++ +++WT++++G Q R ++ +F M E V TS+L G ++
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDA 253
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMH 387
+ E + + + AM+ + G I +A + F+ M +N +W ++ +
Sbjct: 254 EELFEVMPVKPVI----ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G AL F M +G P T ++IL+ C + G++ Q++ Q+++ +
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGI 493
+ + + G L ++ ++ P + D+++ +++S G+
Sbjct: 370 --SVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGL 412
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 155/330 (46%), Gaps = 26/330 (7%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSG 221
A K+FD + + SW S++AGY + +A +F M + N ++ L+ G ++G
Sbjct: 35 EARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP-DRNIISWNGLVSGYMKNG 93
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
+ R++ L+ +R ++ + AL+ YV + A+ +F ++P+K+ VSWT ++
Sbjct: 94 EIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G +Q R ++ L+ + + D + TS++ G +D R + + + R++
Sbjct: 150 GFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI- 204
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMV 401
T MV Y + ++ A + F+ MP K +W ++L G +GR A + FE M
Sbjct: 205 ---TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM- 260
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
+ A+++ G + K R+ F+ M ++ + S + + + R G
Sbjct: 261 ---PVKPVIACNAMISGLGQKGEIAKARRVFDSM-KERNDAS-----WQTVIKIHERNGF 311
Query: 462 LDEAL---MLVRTMPMAPDVLILGALLSAC 488
EAL +L++ + P L ++LS C
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 44/263 (16%)
Query: 102 RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCR 161
+ G P T ++L CA + G Q+H +++ D+YV + L+ +Y C +
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF----LSMNVEPNTATFVSLLVGC 217
+ +FD P +D++ W SII+GYA GL +EA+ +F LS + +PN TFV+ L C
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 218 GRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
+G + G +I+ S+E+ + + C+
Sbjct: 444 SYAGMVEEGLKIYE---------SMESVFGVKPITAHYACM------------------- 475
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
+ L + R E++ + M +EPD + S+L AC LD V E+ ++
Sbjct: 476 --VDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGACRTHSQLD----VAEFCAKK 526
Query: 338 AIK-RDIHIGTAMV--DMYAKCG 357
I+ + GT ++ +MYA G
Sbjct: 527 LIEIEPENSGTYILLSNMYASQG 549
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 25/293 (8%)
Query: 200 SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
S + P TA + R G + R++ F S+ + N+++ Y
Sbjct: 12 STTIPPPTANV--RITHLSRIGKIHEARKL----FDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 260 EAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACA 319
+A+++F E+P ++I+SW ++SG ++ E+ +F M + V T+++
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYV 121
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
+ G +D V E + + +++ T M+ + + G I+ A + + +P K+ +
Sbjct: 122 HNGKVD----VAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 177
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
+++GL GR A + F+EM S + +T+ ++T + VD RK F+ M ++
Sbjct: 178 MIHGLCKEGRVDEAREIFDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVM-PEK 232
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+S + M + G +++A L MP+ P V+ A++S KG
Sbjct: 233 TEVS-----WTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKG 279
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 231/500 (46%), Gaps = 99/500 (19%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSF 75
I + +L K++ + ++ SG+ + + +++ F C L+ C+ + F
Sbjct: 31 ISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRF-----------CT-LRLCNLSYARF 78
Query: 76 PFN-----------SLISSYAGSD--RPQIAILCYRQIV-RNGFLPDSYTFPAMLKSCAM 121
F+ +++++Y+ S A +R +V R+ P+ + +P +LKS
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 122 FLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC-DDCRSAGKVFDEMPVRDVVSWTS 180
+H + K G + VQ +L+H Y A ++FDEM
Sbjct: 139 LSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS--------- 189
Query: 181 IIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
E N ++ ++L G RSG++
Sbjct: 190 -----------------------ERNVVSWTAMLSGYARSGDI----------------- 209
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM- 299
S A +F ++P++D+ SW +I++ Q E++ LFR+M
Sbjct: 210 ------------------SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+ I P+ V + VLSACA G L + +H + RR + D+ + ++VD+Y KCG +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG---EGSTPNEVTFLAIL 416
E A F K++ WN+++N A+HGR A+ FEEM+ P+ +TF+ +L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
AC H GLV KGR YF+ M + ++ + PR+EHYGC+ DLL RAG DEAL ++ TM M
Sbjct: 372 NACTHGGLVSKGRGYFDLM-TNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 477 DVLILGALLSACKDKGILKL 496
D I G+LL+ACK G L L
Sbjct: 431 DEAIWGSLLNACKIHGHLDL 450
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 166/282 (58%), Gaps = 3/282 (1%)
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
S + CG + + R G H L K + ++L+ +Y + A ++F E+P++
Sbjct: 125 SAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER 184
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
++VSWT++ISG Q R L L+ KM S +P+ T++LSAC G L GR VH
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGY 391
+K +HI +++ MY KCG ++ A + F++ K++ +WN+++ G A HG
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 392 AALKFFEEMVGE-GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYG 450
A++ FE M+ + G+ P+ +T+L +L++C H+GLV +GRK+FN M ++ L P L HY
Sbjct: 305 QAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM--AEHGLKPELNHYS 362
Query: 451 CMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
C+ DLL R GLL EAL L+ MPM P+ +I G+LL +C+ G
Sbjct: 363 CLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 5/305 (1%)
Query: 100 IVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDD 159
+ R+G+ D+Y + ++SC + G H + +K G + D+Y+ +SLV LY +
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 160 CRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVG 216
+A KVF+EMP R+VVSWT++I+G+A+ D + ++ M +PN TF +LL
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
C SG L GR +H K L SN+L+ MY KC L +A +IF + KD+VSW
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 277 TSIISGLVQCQRPKESLVLFR-KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
S+I+G Q +++ LF M SG +PD + VLS+C + G + GR +
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGRGYAAL 394
+K +++ + +VD+ + G ++ AL+ MP K N W +LL +HG + +
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 395 KFFEE 399
+ EE
Sbjct: 411 RAAEE 415
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 5/210 (2%)
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++IS +A R I + Y ++ ++ P+ YTF A+L +C +G+G +H
Sbjct: 188 SWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQT 247
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
+ MGL L++ NSL+ +Y C D + A ++FD+ +DVVSW S+IAGYA+ GL +A+
Sbjct: 248 LHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAI 307
Query: 196 TMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+F M +P+ T++ +L C +G ++ GR+ L+ + K L + L+D+
Sbjct: 308 ELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDL 367
Query: 252 YVKCECLSEAKQIFHELP-KKDIVSWTSII 280
+ L EA ++ +P K + V W S++
Sbjct: 368 LGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G D L+S + +C D G H + D+++G+++V +Y G +E A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+ F EMP +N+ +W A+++G A R LK + +M S PN+ TF A+L+AC S
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILG 482
G + +GR Q + L L + + C+ G L +A + DV+
Sbjct: 235 GALGQGRSVHCQTL--HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWN 291
Query: 483 ALLSACKDKGI---------LKLPTRYTRP 503
++++ G+ L +P T+P
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 234/480 (48%), Gaps = 21/480 (4%)
Query: 28 IHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ------CDWRVSSFPFNSLI 81
+++Q++ G N +V V+ + CG L+ C + +N++I
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSS--------CGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 82 SSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
+D+ + ++ +R ++ +G P +T+ +L C+ G IH +I +
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF--- 198
DL + N+L+ +Y C D R A VF + ++VSW SII+G + G ++A+ M+
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 199 LSMNV-EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCEC 257
L M+ P+ TF + + G+ +HG + K + S+ L+ MY K
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 258 LSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
A+++F + ++D+V WT +I G + + ++ F +M+ DG L+SV+ A
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
C+++ L G H R + + A+VDMY K G E A F+ ++ W
Sbjct: 513 CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
N++L + HG AL FFE+++ G P+ VT+L++L AC H G +G+ +NQM
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL-GALLSACKDKGILKL 496
Q + +HY CM +L+ +AGL+DEAL L+ P + L LLSAC + L++
Sbjct: 633 Q--GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQI 690
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 241/503 (47%), Gaps = 32/503 (6%)
Query: 12 LLDYIRRCNN---LKSFKKIHAQLVTSGI---VRNDLVVKRVVDFFGKSVDFVDFGCGFL 65
+++ R+C + LK ++IHA ++T+G + ++ + + CG L
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR--------CGSL 148
Query: 66 KQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGF---LPDSYTFPAML 116
+Q P +N+L S+Y S P A + F P+S TF +++
Sbjct: 149 EQARKVFDKMPHRNVVSYNALYSAY--SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
+ CA+ + G ++ +IK+G ++ VQ S++ +Y C D SA ++FD + RD V
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV 266
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
+W ++I G + ++ + F +M V+P T+ +L GC + G+ +G+ IH I
Sbjct: 267 AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
S L NAL+DMY C + EA +F + ++VSW SIISG + ++++
Sbjct: 327 IVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAM 386
Query: 294 VLFRK-MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
+++R+ + S PD ++ +SA A +G+ +H + + +R + +GT ++ M
Sbjct: 387 LMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSM 446
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
Y K E A + F+ M +++ W ++ G + G A++FF EM E + + +
Sbjct: 447 YFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSL 506
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+++ AC ++ +G + I ++ + G + D+ + G + A + ++
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCV--MSVCGALVDMYGKNGKYETAETIF-SL 563
Query: 473 PMAPDVLILGALLSACKDKGILK 495
PD+ ++L A G+++
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVE 586
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 167/362 (46%), Gaps = 16/362 (4%)
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE---------AV 195
Y N+L+ +Y C A KVFD+MP R++V+ + A + + +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 196 TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE---ASNALMDMY 252
M M + ++ V L C L+ R+IH L+ + + E A+N L+ MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQR-PKESLVLFRKMHSSGIEPDGVIL 311
V+C L +A+++F ++P +++VS+ ++ S + + L M ++P+
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
TS++ CA + D+ G ++ I + ++ + T+++ MY+ CG +E A + F+ +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
++ WN ++ G + + L FF M+ G P + T+ +L C G G+
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
++I L++ + D+ C G + EA + + P+++ +++S C +
Sbjct: 323 HARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSEN 379
Query: 492 GI 493
G
Sbjct: 380 GF 381
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 184/337 (54%), Gaps = 8/337 (2%)
Query: 165 KVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSG 221
++ D+ P+ W +I+ Y R +A+ ++L M V P+ + ++ +
Sbjct: 74 RILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
+ +G+ +H + + + + +Y K A+++F E P++ + SW +II
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI--DRRAI 339
GL R E++ +F M SG+EPD + SV ++C +GDL +H+ + +
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
K DI + +++DMY KCG ++ A F EM +N+ +W++++ G A +G AL+ F +
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ 311
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M G PN++TF+ +L+AC H GLV++G+ YF M+ ++ L P L HYGC+ DLL R
Sbjct: 312 MREFGVRPNKITFVGVLSACVHGGLVEEGKTYF-AMMKSEFELEPGLSHYGCIVDLLSRD 370
Query: 460 GLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
G L EA +V MPM P+V++ G L+ C+ G +++
Sbjct: 371 GQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEM 407
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 171/325 (52%), Gaps = 13/325 (4%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+F +N+++ SY + P AI Y +VR+ LPD Y+ P ++K+ G ++H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDE 193
+ +++G V D + ++ + LY + +A KVFDE P R + SW +II G AG +E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF--KRASKVSLEASNAL 248
AV MF+ M +EP+ T VS+ CG G+L + ++H + K K + N+L
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 249 MDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+DMY KC + A IF E+ ++++VSW+S+I G E+L FR+M G+ P+
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA----MVDMYAKCGCIERALQ 364
+ VLSAC + G ++ G+ Y + ++ G + +VD+ ++ G ++ A +
Sbjct: 322 ITFVGVLSACVHGGLVEEGK---TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 365 TFNEMPCK-NIFTWNALLNGLAMHG 388
EMP K N+ W L+ G G
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFG 403
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 217/413 (52%), Gaps = 19/413 (4%)
Query: 87 SDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYV 146
S P + + QI R S+TF +L +C++ G Q+H ++IK G
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 147 QNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NV 203
+ +L+ +Y + +VF+ + +D+VSW ++++G+ R G EA+ +F +M V
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 204 EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQ 263
E + T S++ C L+ G+++H ++ + + + A++ Y ++EA +
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGT-AMISFYSSVGLINEAMK 240
Query: 264 IFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG 322
+++ L D V S+ISG ++ + KE+ +L + P+ +L+S L+ C++
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNS 295
Query: 323 DLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLN 382
DL G+ +H R D + ++DMY KCG I +A F +P K++ +W ++++
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMID 355
Query: 383 GLAMHGRGYAALKFFEEMVGEGS--TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
A++G G AL+ F EM EGS PN VTFL +++AC H+GLV +G++ F M+ ++Y
Sbjct: 356 AYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG-MMKEKY 414
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD-----VLILGALLSAC 488
L P EHY C D+L +AG +E LV M M D I A+LSAC
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSAC 466
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 34/402 (8%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++HA ++ G + ++D + K VD F + + S+ N+L+S +
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW--NALLSGFL 161
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
+ + + A+ + + R +T +++K+CA + +G Q+H +V+ G DL
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR--DLV 219
Query: 146 V-QNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIAGYARAGLFDEAVTMFLSMNV 203
V +++ Y A KV++ + V D V S+I+G R + EA FL M+
Sbjct: 220 VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSR 276
Query: 204 E-PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+ PN S L GC + +L +G++IH + + + N LMDMY KC + +A+
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 263 QIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM--HSSGIEPDGVILTSVLSACAN 320
IF +P K +VSWTS+I ++L +FR+M SG+ P+ V V+SACA+
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTA----MVDMYAKCG-------CIERALQTFNE- 368
G + G+ E K + GT +D+ +K G +ER ++ N+
Sbjct: 397 AGLVKEGK---ECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQS 453
Query: 369 MPCKNIFTWNALLNGLAMH---GRG-YAALKFFEEMVGEGST 406
+PC W A+L+ +++ RG Y A + EE E ++
Sbjct: 454 IPCA---IWVAVLSACSLNMDLTRGEYVARRLMEETGPENAS 492
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 126/226 (55%), Gaps = 9/226 (3%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-VEPN--TATFVSLLVGCGR 219
A +FDE+P RD+ S S ++ + R+G ++ + +FL ++ P+ + TF +L C
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
GR++H L+ K+ ++ + AL+DMY K L ++ ++F + +KD+VSW ++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
+SG ++ + KE+L +F M+ +E L+SV+ CA++ L G+ VH +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV--VVT 214
Query: 340 KRD-IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
RD + +GTAM+ Y+ G I A++ +N + N+ T +LN L
Sbjct: 215 GRDLVVLGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSL 257
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 135/266 (50%), Gaps = 9/266 (3%)
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
LR+GR F R V+++++N ++ + A +F ELP++D+ S S +S
Sbjct: 5 LRIGR------FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSS 58
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
++ P ++L LF ++H + + T VL AC+ + + GR VH + ++ +
Sbjct: 59 HLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETG 118
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
TA++DMY+K G + +++ F + K++ +WNALL+G +G+G AL F M
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
E +E T +++ C ++ +G++ ++ +L + M GL+
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL---VVLGTAMISFYSSVGLI 235
Query: 463 DEALMLVRTMPMAPDVLILGALLSAC 488
+EA+ + ++ + D ++L +L+S C
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 172/290 (59%), Gaps = 18/290 (6%)
Query: 226 GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLV 284
GR+IH L+ K ++ +L+ Y + A+Q+F E P K++IV WT++IS
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR--- 341
+ + E++ LF++M + IE DGVI+T LSACA++G + G E I R+IKR
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMG----EEIYSRSIKRKRR 199
Query: 342 ---DIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFE 398
D+ + ++++MY K G E+A + F+E K++ T+ +++ G A++G+ +L+ F+
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 399 EM--VGEGS----TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCM 452
+M + + TPN+VTF+ +L AC HSGLV++G+++F MI YNL PR H+GCM
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI-MDYNLKPREAHFGCM 318
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTRYTR 502
DL CR+G L +A + MP+ P+ +I LL AC G ++L R
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQR 368
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 168/336 (50%), Gaps = 18/336 (5%)
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNG-FLPDSYTFPAMLK-SCAMFLGIGE 127
+ S N + Y S P A+L +R R DS++ +K S A +
Sbjct: 24 FHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD 83
Query: 128 GMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIAGYA 186
G QIH +V K+G + +Q SLV Y D A +VFDE P + ++V WT++I+ Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 187 RAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
EA+ +F M +E + L C G ++MG I+ KR +++++
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 244 AS--NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ N+L++MYVK +A+++F E +KD+ ++TS+I G + +ESL LF+KM +
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 302 ------SGIEPDGVILTSVLSACANVGDLDYGR--WVHEYIDRRAIKRDIHIGTAMVDMY 353
+ I P+ V VL AC++ G ++ G+ + +D R+ H G MVD++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG-CMVDLF 322
Query: 354 AKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
+ G ++ A + N+MP K N W LL ++HG
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 54/347 (15%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
++IHA + G + +V F+ SV VD+ + + + + ++IS+Y
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYS-SVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG--LVCD 143
++ AI ++++ D L +CA + G +I+ IK L D
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN- 202
L ++NSL+++Y + A K+FDE +DV ++TS+I GYA G E++ +F M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 203 --------VEPNTATFVSLLVGCGRSGNLRMGRR-IHGLIFKRASKVSLEASNALMDMYV 253
+ PN TF+ +L+ C SG + G+R +I K ++D++
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 254 KCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTS 313
+ L +A + +++P I+P+ VI +
Sbjct: 324 RSGHLKDAHEFINQMP----------------------------------IKPNTVIWRT 349
Query: 314 VLSACANVGDLDYGRWVHEYIDRRAIKRD-IHIG--TAMVDMYAKCG 357
+L AC+ G+++ G E + RR + D H+G A+ ++YA G
Sbjct: 350 LLGACSLHGNVELG----EEVQRRIFELDRDHVGDYVALSNIYASKG 392
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 210/400 (52%), Gaps = 8/400 (2%)
Query: 97 YRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGL-VCDLYVQNSLVHLYG 155
Y ++ G + T+ M++ C+ + EG Q+H +V+K G + +++V N LV Y
Sbjct: 201 YLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYS 260
Query: 156 VCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV---EPNTATFVS 212
C D + + F+ +P +DV+SW SI++ A G +++ +F M P+ F+S
Sbjct: 261 ACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMS 320
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDMYVKCECLSEAKQIFHELPKK 271
L C R+ +++ G++IH + K VS L +AL+DMY KC + + ++ LP
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCL 380
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV--GDLDYGRW 329
++ S+++ L+ C K+ + +F M G D V L++VL A + L
Sbjct: 381 NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTL 440
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR 389
VH + D+ + +++D Y K G E + + F+E+ NIF +++NG A +G
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGM 500
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
G +K EM P+EVT L++L+ C HSGLV++G F+ + S +Y +SP + Y
Sbjct: 501 GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLES-KYGISPGRKLY 559
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
CM DLL RAGL+++A L+ D + +LL +C+
Sbjct: 560 ACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCR 599
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 223/477 (46%), Gaps = 47/477 (9%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N LIS + AI Y ++V G + TFP++L C+ L EG+Q+H VI
Sbjct: 80 YNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVI 139
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+G C+++V+++LV LY A K+FDEM R++ ++ + + G
Sbjct: 140 SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFE 199
Query: 197 MFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDMY 252
++L M +E N T+ ++ GC + G+++H L+ K +S + +N L+D Y
Sbjct: 200 VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
C LS + + F+ +P+KD++SW SI+S +SL LF KM G P
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIK-RDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
S L+ C+ D+ G+ +H Y+ + +H+ +A++DMY KC IE + + +PC
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA------------- 418
N+ N+L+ L G ++ F M+ EG+ +EVT +L A
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCT 439
Query: 419 ---CC--HSG----------LVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL---CRAG 460
CC SG L+D K +S++ + C+T ++ R G
Sbjct: 440 LVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNG 499
Query: 461 LLDEALMLVRTMP---MAPDVLILGALLSACKDKGILK--------LPTRYTRPPHR 506
+ + + ++R M + PD + + ++LS C G+++ L ++Y P R
Sbjct: 500 MGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 154/316 (48%), Gaps = 5/316 (1%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCG 218
SA + FDEM VRDVV++ +I+G +R G A+ ++ M + + +TF S+L C
Sbjct: 64 SAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCS 123
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
R G ++H + ++ +AL+ +Y + A ++F E+ +++
Sbjct: 124 DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNL 183
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA 338
++ Q K ++ +M G+ +G+ ++ C++ + G+ +H + +
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 339 IK-RDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFF 397
+I + +VD Y+ CG + ++++FN +P K++ +WN++++ A +G +L F
Sbjct: 244 WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLF 303
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
+M G P+ F++ L C + + G++ ++ +++S L + D+
Sbjct: 304 SKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS-LHVQSALIDMYG 362
Query: 458 RAGLLDEALMLVRTMP 473
+ ++ + +L +++P
Sbjct: 363 KCNGIENSALLYQSLP 378
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 41/362 (11%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKR-VVDFFGKSVDFVDFGCGFLKQCDW 70
L++ R ++++S K+IH ++ G + L V+ ++D +GK C ++
Sbjct: 321 FLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK--------CNGIENSAL 372
Query: 71 RVSSFPF------NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG 124
S P NSL++S + I + ++ G D T +LK A+ L
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK--ALSLS 430
Query: 125 IGEGMQ----IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTS 180
+ E + +H IK G D+ V SL+ Y + KVFDE+ ++ TS
Sbjct: 431 LPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTS 490
Query: 181 IIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR- 236
II GYAR G+ + V M M N+ P+ T +S+L GC SG + G LIF
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGE----LIFDSL 546
Query: 237 ASKVSLEASNAL----MDMYVKCECLSEAKQIFHEL-PKKDIVSWTSIISGLVQCQRPKE 291
SK + L +D+ + + +A+++ + D V+W+S L+Q R
Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSS----LLQSCRIHR 602
Query: 292 SLVLFRKMHSS--GIEPDG-VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
+ + R+ +EP+ + V +GD + R + E R + R+I +
Sbjct: 603 NETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Query: 349 MV 350
+V
Sbjct: 663 VV 664
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
N +D +K L A + F E+ +D+V++ +ISG + ++ L+ +M S G+
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
SVLS C++ G VH + ++ + +A+V +YA ++ AL+
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKL 169
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
F+EM +N+ N LL G + + M EG N +T+ ++ C H LV
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+G++ + ++ +N+S + + D G L ++ +P DV+ +++
Sbjct: 230 YEGKQLHSLVVKSGWNIS-NIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIV 287
Query: 486 SACKDKG 492
S C D G
Sbjct: 288 SVCADYG 294
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 225/469 (47%), Gaps = 47/469 (10%)
Query: 43 VVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSS------FPFNSLISSYAGSDRPQIAILC 96
V+ V+D +GK CG Q + + +NS+IS+++ + A
Sbjct: 431 VINSVIDMYGK--------CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 97 YRQIVRNGFLPDSYTFP---AMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHL 153
++++V + ++ A+L SC + G +H + K+G
Sbjct: 483 FKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-------------- 527
Query: 154 YGVCDDCRSAGKVFDEMP-VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNT-ATFV 211
D SA + M RD+ SW S+I+G A +G E++ F +M+ E +
Sbjct: 528 -----DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 212 SLLVGCGRSGNLRM---GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL 268
+LL SGNL + GR HGL K ++ + N L+ MY +C+ + A ++F +
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 269 PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
++ SW +IS L Q + +E LFR + +EP+ + +LSA +G YG
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGM 699
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHG 388
H ++ RR + + + A+VDMY+ CG +E ++ F +I WN++++ HG
Sbjct: 700 QAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHG 759
Query: 389 RGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G A++ F+E+ PN+ +F+++L+AC HSG +D+G Y+ QM +++ + P E
Sbjct: 760 MGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM-EEKFGVKPVTE 818
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
H + D+L RAG L EA + + + GALLSAC G KL
Sbjct: 819 HRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKL 867
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 235/496 (47%), Gaps = 37/496 (7%)
Query: 8 LKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--L 65
L+ VL ++ R ++ + +H + G++++ +++ F+G++ + V C F L
Sbjct: 90 LRDVLRSFMMRTET-ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDEL 148
Query: 66 KQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGI 125
K+ D V +NS+I++ + R A+ + +++ G DS T + +
Sbjct: 149 KEKDVIV----WNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLS 204
Query: 126 GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGY 185
+ +H + I+ GLV D + N+L++LY ++ SA VF M RD+VSW +I+
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 186 ARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR--ASKV 240
G +++ F SM E +T TF ++ C L +G +HGL+ K + +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
+ N+++ MY KC A+ +F EL +D++S +I++G +E+ + +M
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 301 S-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK-RDIHIGTAMVDMYAKCGC 358
S I+PD + S+ S C ++ GR VH Y R ++ R + + +++DMY KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 359 IERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTP--NEVTFLAIL 416
+A F +++ +WN++++ + +G + A F+E+V E S + T LAIL
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAP 476
T+C S + G+ C L + G L A + + TM
Sbjct: 505 TSCDSSDSLIFGKSVH------------------CW---LQKLGDLTSAFLRLETMSETR 543
Query: 477 DVLILGALLSACKDKG 492
D+ +++S C G
Sbjct: 544 DLTSWNSVISGCASSG 559
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 160/280 (57%), Gaps = 11/280 (3%)
Query: 223 LRMGRRIHGLIFKRASKVSLE-ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
LR+GR +HG++ K E L+ Y K L A+++F E+P++ V+W ++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 282 GLVQCQ-----RPKESLVLFRKMH--SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI 334
G + ++++VLFR+ SG+ P + VLSA + G L+ G VH YI
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 335 DRRAI--KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYA 392
++ + D+ IGTA+VDMY+KCGC+ A F M KN+FTW ++ GLA++GRG
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 393 ALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCM 452
M G PNE+TF ++L+A H GLV++G + F M ++ ++P +EHYGC+
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSM-KTRFGVTPVIEHYGCI 365
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
DLL +AG + EA + MP+ PD ++L +L +AC G
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYG 405
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 177/395 (44%), Gaps = 44/395 (11%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD-----------FVDFGCGFLKQCDWRVSS 74
K+IHAQLV +G N L K + + K F FG
Sbjct: 25 KQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFG---------HPDK 75
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLP--DSYTFPAML---KSCAMFLGIGEGM 129
F FN+L+ +P+ +I + L + TF +L A + G
Sbjct: 76 FLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGR 131
Query: 130 QIHGIVIKMGLVCDL-YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR- 187
+HG+V K+G + + + +L+H Y D R A KVFDEMP R V+W ++I GY
Sbjct: 132 IVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 188 --AGLFDEAVTMFL-------SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA- 237
G + M L V P T V +L ++G L +G +HG I K
Sbjct: 192 KDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGF 251
Query: 238 -SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF 296
+V + AL+DMY KC CL+ A +F + K++ +WTS+ +GL R E+ L
Sbjct: 252 TPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLL 311
Query: 297 RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAK 355
+M SGI+P+ + TS+LSA ++G ++ G + + + R + I +VD+ K
Sbjct: 312 NRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGK 371
Query: 356 CGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR 389
G I+ A Q MP K + +L N +++G
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 214/452 (47%), Gaps = 42/452 (9%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N +I+ YA + A + +V G + PDS T ++L CA + G +IH +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 136 IKMG-LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYA---RAGLF 191
++ L+ D V N+L+ Y D +A F M +D++SW +I+ +A + F
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 192 DEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA---SKVSLEASNAL 248
+ L+ + ++ T +SLL C + + +HG K + + NAL
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 249 MDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQR------------------- 288
+D Y KC + A +IF L ++ +VS+ S++SG V
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 289 ------------PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
P E++ +FR++ + G+ P+ V + ++L CA + L R H YI R
Sbjct: 537 SLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR 596
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
+ DI + ++D+YAKCG ++ A F +++ + A++ G A+HGRG AL
Sbjct: 597 GGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMI 655
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
+ M P+ V +LTACCH+GL+ G + ++ I + + P +E Y C DL+
Sbjct: 656 YSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDS-IRTVHGMKPTMEQYACAVDLI 714
Query: 457 CRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
R G LD+A V MP+ P+ I G LL AC
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC 746
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 37/433 (8%)
Query: 11 VLLDYIRRC---NNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQ 67
V LD ++ C ++L S + +H + G + V K V++ + K D F +Q
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF-RQ 81
Query: 68 CDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVR--------NGFLPDSYTFPAMLKSC 119
D + +N +++ +++ C R+ +R + P S TF +L C
Sbjct: 82 MD-SLDPVVWNIVLTG--------LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 120 AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYG----VCDDCRSAGKVFDEMPVRDV 175
G +H +IK GL D V N+LV +Y + D +A FD + +DV
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA---FDGIADKDV 189
Query: 176 VSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCG---RSGNLRMGRRI 229
VSW +IIAG++ + +A F L EPN AT ++L C ++ R GR+I
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQI 249
Query: 230 HGLIFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV-QCQ 287
H + +R+ + + N+L+ Y++ + EA +F + KD+VSW +I+G C+
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE 309
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA-IKRDIHIG 346
K + +H + PD V + S+L CA + DL G+ +H YI R + + D +G
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG 369
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
A++ YA+ G A F+ M K+I +WNA+L+ A + + L ++ E T
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 407 PNEVTFLAILTAC 419
+ VT L++L C
Sbjct: 430 LDSVTILSLLKFC 442
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 22/363 (6%)
Query: 98 RQIVRN-----GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
RQ V+N GF D F ++K+CA + G +HG V K+G + V S+++
Sbjct: 5 RQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLN 64
Query: 153 LYGVC---DDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV----EP 205
+Y C DDC+ K+F +M D V W ++ G + E + F +M+ +P
Sbjct: 65 MYAKCRRMDDCQ---KMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKP 120
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE-CLSEAKQI 264
++ TF +L C R G+ G+ +H I K + NAL+ MY K +A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD- 323
F + KD+VSW +II+G + ++ F M EP+ + +VL CA++
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 324 --LDYGRWVHEYIDRRA-IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNAL 380
GR +H Y+ +R+ ++ + + ++V Y + G IE A F M K++ +WN +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
+ G A + + A + F +V +G +P+ VT ++IL C + G++ + ++
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 440 YNL 442
Y L
Sbjct: 361 YLL 363
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGK-SVDFVDFGCGFLKQCDWRVSSFPFNSLISSY 84
K +H+ ++ +G+ ++ LV +V + K F D F D V S+ N++I+ +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW--NAIIAGF 199
Query: 85 AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF---LGIGEGMQIHGIVIKMG-L 140
+ ++ A + +++ P+ T +L CA + G QIH V++ L
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 141 VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLS 200
++V NSLV Y A +F M +D+VSW +IAGYA + +A +F +
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 201 M----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS-LEASNALMDMYVKC 255
+ +V P++ T +S+L C + +L G+ IH I + + + NAL+ Y +
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 256 ECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVL 315
S A F + KDI+SW +I+ + + L L + + I D V + S+L
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 316 SACANVGDLDYGRWVHEYIDRRAIKRDIH---IGTAMVDMYAKCGCIERALQTFNEMPC- 371
C NV + + VH Y + + D +G A++D YAKCG +E A + F +
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER 499
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
+ + ++N+LL+G G A F EM T + +CC
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC 548
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 187/419 (44%), Gaps = 56/419 (13%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVV-KRVVDFFGKSVDFVDFGCGFLKQCDWRVS--- 73
+ +L S K+IH+ ++ + D V ++ F+ + F D + W S
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR---FGDTSAAY-----WAFSLMS 393
Query: 74 ---SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+N+++ ++A S + + ++ DS T ++LK C GIG+ +
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 453
Query: 131 IHGIVIKMGLVCDLY---VQNSLVHLYGVCDDCRSAGKVF-------------------- 167
+HG +K GL+ D + N+L+ Y C + A K+F
Sbjct: 454 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 168 ------------DEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVS 212
EM D+ +W+ ++ YA + +EA+ +F + + PNT T ++
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMN 573
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
LL C + +L + R+ HG I R + L+D+Y KC L A +F ++D
Sbjct: 574 LLPVCAQLASLHLVRQCHGYII-RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRD 632
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
+V +T++++G R KE+L+++ M S I+PD V +T++L+AC + G + G +++
Sbjct: 633 LVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYD 692
Query: 333 YIDR-RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR 389
I +K + VD+ A+ G ++ A +MP + N W LL + R
Sbjct: 693 SIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
F+ ++ C +L GR +HG +FK E S ++++MY KC + + +++F ++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 270 KKDIVSWTSIISGL-VQCQRPKESLVLFRKMH-SSGIEPDGVILTSVLSACANVGDLDYG 327
D V W +++GL V C R E++ F+ MH + +P V VL C +GD G
Sbjct: 84 SLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI-ERALQTFNEMPCKNIFTWNALLNGLAM 386
+ +H YI + +++D +G A+V MYAK G I A F+ + K++ +WNA++ G +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 387 HGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH--SGLVDKGRKYFNQMISQQYNLSP 444
+ A + F M+ E + PN T +L C + + + + + Q+ L
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 445 RLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ + R G ++EA L M
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRM 289
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 179/359 (49%), Gaps = 39/359 (10%)
Query: 132 HGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLF 191
HG + ++ NS++ Y D SA +FD+M RD +SW ++I GY
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 192 DEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
++A +F M PN R H N ++
Sbjct: 329 EDAFALFSEM---PN--------------------RDAHSW-------------NMMVSG 352
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y + A+ F + P+K VSW SII+ + + KE++ LF +M+ G +PD L
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
TS+LSA + +L G +H+ + + I D+ + A++ MY++CG I + + F+EM
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 372 K-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
K + TWNA++ G A HG AL F M G P+ +TF+++L AC H+GLVD+ +
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
F M+S Y + P++EHY + ++ G +EA+ ++ +MP PD + GALL AC+
Sbjct: 532 QFVSMMS-VYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 153/308 (49%), Gaps = 18/308 (5%)
Query: 143 DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN 202
D + N +V Y + A F++ P + VSW SIIA Y + + EAV +F+ MN
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 203 VE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
+E P+ T SLL NLR+G ++H ++ K + NAL+ MY +C +
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIM 460
Query: 260 EAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSAC 318
E+++IF E+ K+++++W ++I G E+L LF M S+GI P + SVL+AC
Sbjct: 461 ESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNAC 520
Query: 319 ANVGDLDYGRWVHEYIDRRA---IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF 375
A+ G +D + +++ + I+ + +++V++ + G E A+ MP +
Sbjct: 521 AHAGLVDEAK--AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDK 578
Query: 376 T-WNALLNGLAMH---GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
T W ALL+ ++ G + A + + E STP ++ + GL D+ +
Sbjct: 579 TVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP----YVLLYNMYADMGLWDEASQV 634
Query: 432 FNQMISQQ 439
M S++
Sbjct: 635 RMNMESKR 642
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 142/305 (46%), Gaps = 39/305 (12%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +NS+I++Y + + A+ + ++ G PD +T ++L + + + GMQ+H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV-RDVVSWTSIIAGYARAGLFD 192
IV+K ++ D+ V N+L+ +Y C + + ++FDEM + R+V++W ++I GYA G
Sbjct: 434 IVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EA+ +F SM + P+ TFVS+L C +G + +A VS +M
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA---------KAQFVS------MM 537
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
+Y K E Q+ H S ++ SG Q + E++ + M EPD
Sbjct: 538 SVY-KIE-----PQMEH------YSSLVNVTSGQGQFE---EAMYIITSM---PFEPDKT 579
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
+ ++L AC ++ E + R + + +MYA G + A Q M
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY-VLLYNMYADMGLWDEASQVRMNM 638
Query: 370 PCKNI 374
K I
Sbjct: 639 ESKRI 643
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 67/396 (16%)
Query: 143 DLYVQNSLVHLYGVCDDCR---SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
D+ N+++ Y C R A K+FDEMP RD SW ++I+GYA+ EA+ +F
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 200 SMNVEPNTATFVSLLVG------------------------------------------- 216
M E N ++ +++ G
Sbjct: 161 KM-PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 217 -CGRSGNLRMGRR-----IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK 270
G+ G+L GR + LI + +EA+ L D + C + F E
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ-IPDLCGDDHGGEFRERFC 278
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
K++VSW S+I ++ + +LF +M + D + +++ +V ++ +
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFAL 334
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRG 390
+ RD H MV YA G +E A F + P K+ +WN+++ +
Sbjct: 335 FSEMP----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 391 YAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD-KGRKYFNQMISQQYNLSPRLEHY 449
A+ F M EG P+ T ++L+A +GLV+ + +Q++ + + P + +
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVK--TVIPDVPVH 446
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+ + R G + E+ + M + +V+ A++
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 160/366 (43%), Gaps = 48/366 (13%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG---LFDEAVTMFLSMNVE 204
N+++ Y + A K+FD MP RDVV+W ++I+GY G +EA +F M
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM--- 131
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P+ +F + G + N R+G + L+F++ + + + +A++ + + + A +
Sbjct: 132 PSRDSFSWNTMISGYAKNRRIGEAL--LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVL 189
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS--SGIEPDGVILTSVLSACANVG 322
F ++P KD ++++GL++ +R E+ + + S SG E +++ G
Sbjct: 190 FRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 323 DLDYGRWVHEYID-----------RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
++ R + + I R +++ +M+ Y K G + A F++M
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD 309
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE--VTFLAILTACCHSGLVDKGR 429
++ +WN +++G R A F EM PN ++ +++ G V+ R
Sbjct: 310 RDTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDAHSWNMMVSGYASVGNVELAR 363
Query: 430 KYFNQMISQQYNLS--------PRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
YF + +++ +S + + Y DL R + E PD L
Sbjct: 364 HYFEK-TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE----------KPDPHTL 412
Query: 482 GALLSA 487
+LLSA
Sbjct: 413 TSLLSA 418
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
+ A+N ++ ++ ++EA+ IF +L ++ V+W ++ISG V+ + ++ LF M
Sbjct: 38 LGFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM 97
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+ D V +++S + G + + + D RD M+ YAK I
Sbjct: 98 P----KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRI 152
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTP 407
AL F +MP +N +W+A++ G +G +A+ F +M + S+P
Sbjct: 153 GEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 191/377 (50%), Gaps = 15/377 (3%)
Query: 125 IGEGMQIHGIVIKMGL-VCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
I G+Q H + L C + V SL H + D FD P W +I
Sbjct: 29 IINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH-------FDSDP--STSDWNYLIR 79
Query: 184 GYARAGLFDEAV----TMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK 239
G++ + ++ M LS P+ TF L C R ++ IHG + +
Sbjct: 80 GFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFL 139
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
+ +L+ Y + A ++F E+P +D+VSW +I ++L ++++M
Sbjct: 140 DDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM 199
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+ G+ D L ++LS+CA+V L+ G +H + + + A++DMYAKCG +
Sbjct: 200 GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSL 259
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
E A+ FN M +++ TWN+++ G +HG G A+ FF +MV G PN +TFL +L C
Sbjct: 260 ENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC 319
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVL 479
H GLV +G ++F +++S Q++L+P ++HYGCM DL RAG L+ +L ++ D +
Sbjct: 320 SHQGLVKEGVEHF-EIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV 378
Query: 480 ILGALLSACKDKGILKL 496
+ LL +CK L+L
Sbjct: 379 LWRTLLGSCKIHRNLEL 395
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 195/384 (50%), Gaps = 7/384 (1%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVD-FVDFGCGFLKQCD 69
V++ ++ CN++K +KIH+ ++ +G+ + + ++ F SV + D
Sbjct: 7 VIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD 66
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCY-RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
S+ +N LI ++ S P +IL Y R ++ + PD +TF LKSC I +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
++IHG VI+ G + D V SLV Y A KVFDEMPVRD+VSW +I ++
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 189 GLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
GL ++A++M+ M E ++ T V+LL C L MG +H + + + S
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
NAL+DMY KC L A +F+ + K+D+++W S+I G E++ FRKM +SG+
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVR 306
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERALQ 364
P+ + +L C++ G + G E + + + ++ MVD+Y + G +E +L+
Sbjct: 307 PNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLE 366
Query: 365 TFNEMPC-KNIFTWNALLNGLAMH 387
C ++ W LL +H
Sbjct: 367 MIYASSCHEDPVLWRTLLGSCKIH 390
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 199/397 (50%), Gaps = 6/397 (1%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIV-RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++I+ A + R A+ +R ++ P+S +L + G ++H V
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 136 IK-MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEA 194
+K V +V + L+ LY C D S +VF R+ +SWT++++GYA G FD+A
Sbjct: 343 LKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQA 402
Query: 195 VTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDM 251
+ + M E P+ T ++L C ++ G+ IH K ++ +LM M
Sbjct: 403 LRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVM 462
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
Y KC ++F L ++++ +WT++I V+ + + +FR M S PD V +
Sbjct: 463 YSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTM 522
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
VL+ C+++ L G+ +H +I ++ + + ++ MY KCG + A +F+ +
Sbjct: 523 GRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAV 582
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
K TW A++ + A+ FE+MV G TPN TF A+L+ C +G VD+ ++
Sbjct: 583 KGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRF 642
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
FN M+ + YNL P EHY + +LL R G ++EA L
Sbjct: 643 FNLML-RMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 217/479 (45%), Gaps = 47/479 (9%)
Query: 65 LKQCDWRVSSFPFNSL--------ISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAML 116
++ D SS P +S I +A + ++A+ + + G ++ TF A+L
Sbjct: 59 FRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALL 118
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV 176
++C + G Q+H + GL + +++ LVH+Y C + A KVFDE +V
Sbjct: 119 EACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVY 178
Query: 177 SWTSIIAGYARAG--LFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
SW +++ G +G + + ++ F M V+ N + ++ + LR G + H
Sbjct: 179 SWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHA 238
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKE 291
L K S+ +L+DMY KC + A+++F E+ ++DIV W ++I+GL +R E
Sbjct: 239 LAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWE 298
Query: 292 SLVLFRKMHS-SGIEPDGVILTSVLSACANVGDLDYGRWVHEYI-DRRAIKRDIHIGTAM 349
+L LFR M S I P+ VILT++L +V L G+ VH ++ + + + +
Sbjct: 299 ALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGL 358
Query: 350 VDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
+D+Y KCG + + F +N +W AL++G A +GR AL+ M EG P+
Sbjct: 359 IDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDV 418
Query: 410 VTFLAILTACCHSGLVDKGRKYFNQMISQQY------------------------NLSPR 445
VT +L C + +G++ + + L R
Sbjct: 419 VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDR 478
Query: 446 LEH-----YGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSACKDKGILKL 496
LE + M D L + + R M ++ PD + +G +L+ C D LKL
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 217/480 (45%), Gaps = 110/480 (22%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F NS+ ++ D + Y Q R G +PD+++FP ++KS F G+ +
Sbjct: 72 FVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQAL 126
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE------------------------- 169
V K+G D YV+N ++ +Y + SA KVFD+
Sbjct: 127 VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEA 186
Query: 170 ------MPVRDVVSWT-------------------------------SIIAGYARAGLFD 192
MP DVVSWT ++++GYA+ G +
Sbjct: 187 CKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTE 246
Query: 193 EAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+A+ +F L + V PN T+V ++ C + + R + LI ++ +++ AL+
Sbjct: 247 DALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALL 306
Query: 250 DMYVKCECLSEAKQIFHEL--------------------------------PKKDIVSWT 277
DM+ KC + A++IF+EL PK+++VSW
Sbjct: 307 DMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWN 366
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSG-IEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
S+I+G + ++ F M G +PD V + SVLSAC ++ DL+ G + +YI +
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK 426
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKF 396
IK + +++ MYA+ G + A + F+EM +++ ++N L A +G G L
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNL 486
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLL 456
+M EG P+ VT+ ++LTAC +GL+ +G++ F + +P +HY CM DLL
Sbjct: 487 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI------RNPLADHYACM-DLL 539
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 11/237 (4%)
Query: 3 RIRLN--LKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDF 60
R+RLN +K LLD +C +++S ++I +L G RN + ++ + + D
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 61 GCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNG-FLPDSYTFPAMLKSC 119
F V S +NSLI+ YA + + +AI + ++ G PD T ++L +C
Sbjct: 351 RQLFDTMPKRNVVS--WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 120 AMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWT 179
+ G I + K + + SL+ +Y + A +VFDEM RDVVS+
Sbjct: 409 GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 180 SIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
++ +A G E + + M +EP+ T+ S+L C R+G L+ G+RI I
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 162/324 (50%), Gaps = 17/324 (5%)
Query: 173 RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
R + G G EAV + S ++ T+ LL C + G+RIH
Sbjct: 74 RKTEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQ 133
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
+F ++ Y+K + L I + L D++ W ++ISG VQ +E
Sbjct: 134 MF---------VVGFALNEYLKVKLL-----ILYALS--DLIPWNAMISGYVQKGLEQEG 177
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
L ++ M + I PD SV AC+ + L++G+ H + +R IK +I + +A+VDM
Sbjct: 178 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDM 237
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
Y KC + F+++ +N+ TW +L++G HG+ LK FE+M EG PN VTF
Sbjct: 238 YFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 297
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
L +LTAC H GLVDKG ++F M + Y + P +HY M D L RAG L EA V
Sbjct: 298 LVVLTACNHGGLVDKGWEHFYSM-KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKS 356
Query: 473 PMAPDVLILGALLSACKDKGILKL 496
P + G+LL AC+ G +KL
Sbjct: 357 PCKEHPPVWGSLLGACRIHGNVKL 380
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 103 NGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS 162
+G + T+ +L+ C +G +IH + +G + Y++ L+ LY +
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS----- 156
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGR 219
D++ W ++I+GY + GL E + ++ M + P+ TF S+ C
Sbjct: 157 -----------DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 205
Query: 220 SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI 279
L G+R H ++ KR K ++ +AL+DMY KC S+ ++F +L +++++WTS+
Sbjct: 206 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 265
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
ISG + E L F KM G P+ V VL+AC + G +D G W H Y ++
Sbjct: 266 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFY----SM 320
Query: 340 KRDIHIG------TAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR--- 389
KRD I AMVD + G ++ A + + PCK + W +LL +HG
Sbjct: 321 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 380
Query: 390 -GYAALKFFE 398
AA KF E
Sbjct: 381 LELAATKFLE 390
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 28/274 (10%)
Query: 16 IRRCNNLKSF---KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRV 72
++ C K + K+IHAQ+ G N+ + +++ + S D +
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS-DLI-------------- 159
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
P+N++IS Y Q + Y + +N +PD YTF ++ ++C+ + G + H
Sbjct: 160 ---PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAH 216
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
++IK + ++ V ++LV +Y C +VFD++ R+V++WTS+I+GY G
Sbjct: 217 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVS 276
Query: 193 EAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN--A 247
E + F M E PN TF+ +L C G + G H KR + E + A
Sbjct: 277 EVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAA 335
Query: 248 LMDMYVKCECLSEAKQIFHELP-KKDIVSWTSII 280
++D + L EA + + P K+ W S++
Sbjct: 336 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 369
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 183/344 (53%), Gaps = 22/344 (6%)
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM-----------NVEPNT 207
D A ++F +P W +II G+A + A + + SM V+ T
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 208 ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHE 267
+F L C R+ ++H I +R L+D Y K L A ++F E
Sbjct: 112 CSFT--LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 268 LPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+P +D+ SW ++I+GLV R E++ L+++M + GI V + + L AC+++GD+ G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 328 RWV-HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLA 385
+ H Y + I + A +DMY+KCG +++A Q F + K ++ TWN ++ G A
Sbjct: 230 ENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 386 MHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPR 445
+HG + AL+ F+++ G P++V++LA LTAC H+GLV+ G FN M + +
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK--GVERN 342
Query: 446 LEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
++HYGC+ DLL RAG L EA ++ +M M PD ++ +LL A +
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASE 386
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 25/382 (6%)
Query: 16 IRRCNNLKSFKKIHAQLVTSG-----IVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
I++C + K++ + +T+G +R+ L+ + + FG + F +
Sbjct: 10 IQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGD----LSFAVQIFRYIPK 65
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLP------DSYTFPAMLKSCAMFLG 124
+++ +N++I +AGS P +A YR +++ D+ T LK+CA L
Sbjct: 66 PLTN-DWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAG 184
Q+H + + GL D + +L+ Y D SA K+FDEMPVRDV SW ++IAG
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 185 YARAGLFDEAVTMFLSMNVEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
EA+ ++ M E + T V+ L C G+++ G IF S +
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN----IFHGYSNDN 240
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
+ SNA +DMY KC + +A Q+F + KK +V+W ++I+G +L +F K+
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
+GI+PD V + L+AC + G ++YG V + + ++R++ +VD+ ++ G +
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR 360
Query: 361 RALQTFNEMP-CKNIFTWNALL 381
A M + W +LL
Sbjct: 361 EAHDIICSMSMIPDPVLWQSLL 382
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 230/428 (53%), Gaps = 17/428 (3%)
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
+ D R + + +++S Y S + IA + ++++ + ++ M+ A
Sbjct: 99 LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSG 154
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIA 183
I + +++ + + +V NS+V A +F+ MP RDVVSWT+++
Sbjct: 155 RIDKALELFDEMPERNIVS----WNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVD 210
Query: 184 GYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
G A+ G DEA +F M E N ++ +++ G ++ + ++ ++ +R
Sbjct: 211 GLAKNGKVDEARRLFDCM-PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFA 265
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+ N ++ +++ +++A +F +P+K+++SWT++I+G V+ + +E+L +F KM G
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 304 -IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
++P+ S+LSAC+++ L G+ +H+ I + +++ + +A+++MY+K G + A
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 363 LQTF-NEMPC-KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
+ F N + C +++ +WN+++ A HG G A++ + +M G P+ VT+L +L AC
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLI 480
H+GLV+KG ++F ++ + +L R EHY C+ DL RAG L + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDE-SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSF 504
Query: 481 LGALLSAC 488
GA+LSAC
Sbjct: 505 YGAILSAC 512
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 166/346 (47%), Gaps = 45/346 (13%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSG 221
A K+FD +P RDVV+WT +I GY + G EA +F ++ N T+ +++ G RS
Sbjct: 64 EARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSK 123
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIIS 281
L I ++F+ + ++ + N ++D Y + + +A ++F E+P+++IVSW S++
Sbjct: 124 QL----SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI-- 339
LVQ R E++ LF +M D V T+++ A G +D R + + + R I
Sbjct: 180 ALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS 235
Query: 340 -------------------------KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI 374
+RD M+ + + + +A F+ MP KN+
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV 295
Query: 375 FTWNALLNGLAMHGRGYAALKFFEEMVGEGST-PNEVTFLAILTACCH-SGLVDKGRKYF 432
+W ++ G + AL F +M+ +GS PN T+++IL+AC +GLV+ +
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG--QQI 353
Query: 433 NQMISQ---QYN---LSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+Q+IS+ Q N S L Y +L+ + D L+ R +
Sbjct: 354 HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 17/241 (7%)
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKES 292
I+ +S+ + L+ K ++EA+++F LP++D+V+WT +I+G ++ +E+
Sbjct: 37 IYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA 96
Query: 293 LVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDM 352
LF ++ S + V T+++S L + E + + +R++ M+D
Sbjct: 97 RELFDRVDS---RKNVVTWTAMVSGYLRSKQLS----IAEMLFQEMPERNVVSWNTMIDG 149
Query: 353 YAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
YA+ G I++AL+ F+EMP +NI +WN+++ L GR A+ FE M + V++
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----PRRDVVSW 205
Query: 413 LAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
A++ +G VD+ R+ F+ M + + + M + +DEA L + M
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERN------IISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 473 P 473
P
Sbjct: 260 P 260
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 145/230 (63%), Gaps = 2/230 (0%)
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILTSVLSACA 319
AK++ +++++W +I G V+ + +E+L + M S + I+P+ S L+ACA
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA 379
+GDL + +WVH + I+ + + +A+VD+YAKCG I + + F + ++ WNA
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQ 439
++ G A HG A++ F EM E +P+ +TFL +LT C H GL+++G++YF M S++
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM-SRR 295
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+++ P+LEHYG M DLL RAG + EA L+ +MP+ PDV+I +LLS+ +
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSR 345
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 121/226 (53%), Gaps = 6/226 (2%)
Query: 163 AGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCG 218
A KV ++V++W +I GY R ++EA+ +M +++PN +F S L C
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
R G+L + +H L+ +++ S+AL+D+Y KC + ++++F+ + + D+ W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR- 337
+I+G E++ +F +M + + PD + +L+ C++ G L+ G+ + RR
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLN 382
+I+ + AMVD+ + G ++ A + MP + ++ W +LL+
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 9/240 (3%)
Query: 107 PDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKV 166
P+ ++F + L +CA + +H ++I G+ + + ++LV +Y C D ++ +V
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNL 223
F + DV W ++I G+A GL EA+ +F M E P++ TF+ LL C G L
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 224 RMGRRIHGLIFKRAS-KVSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIIS 281
G+ GL+ +R S + LE A++D+ + + EA ++ +P + D+V W S++S
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
+ P+ + + + S D V+L+++ S+ + + V E + + I++
Sbjct: 343 SSRTYKNPELGEIAIQNL-SKAKSGDYVLLSNIYSSTKK---WESAQKVRELMSKEGIRK 398
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSSF 75
R +L K +H+ ++ SGI N ++ +VD + K D F +K+ D +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSI--- 233
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+N++I+ +A AI + ++ PDS TF +L +C+ + EG + G++
Sbjct: 234 -WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 136 I-KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIA 183
+ + L ++V L G + A ++ + MP+ DVV W S+++
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 40/351 (11%)
Query: 178 WTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
+ ++I Y G + ++ +F L+ +V+PN TF SL+ S ++ G +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 235 KRA----------------SKVSLEASNALMD-----MYVKCECLSEA----------KQ 263
KR LE+S + D V C L +A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 264 IFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKM---HSSGIEPDGVILTSVLSACAN 320
F +P D+VSWT++I+G + ++L++F +M + I P+ SVLS+CAN
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 321 V--GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWN 378
G + G+ +H Y+ + I +GTA++DMY K G +E AL F+++ K + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
A+++ LA +GR AL+ FE M PN +T LAILTAC S LVD G + F+ + S
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS- 352
Query: 439 QYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACK 489
+Y + P EHYGC+ DL+ RAGLL +A ++++P PD +LGALL ACK
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACK 403
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 43/353 (12%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N+LI SY + + ++ + ++ + P++ TFP+++K+ + G+ +HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE--------------------------- 169
K G + D +VQ S V YG D S+ K+FD+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 170 ----MPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM------NVEPNTATFVSLLVGCGR 219
MPV DVVSWT++I G+++ GL +A+ +F M + PN ATFVS+L C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 220 --SGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT 277
G +R+G++IHG + + ++ AL+DMY K L A IF ++ K + +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI--D 335
+IIS L RPK++L +F M SS + P+G+ L ++L+ACA +D G + I +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMH 387
+ I H G +VD+ + G + A +P + + ALL +H
Sbjct: 354 YKIIPTSEHYG-CVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIH 405
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 215/441 (48%), Gaps = 40/441 (9%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A++ +R++ PDS + +++ S I G I ++ G + V + +
Sbjct: 738 ALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF-PVSVDRNYML 796
Query: 153 LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTAT 209
V D A K ++ W +I G++ + ++++++++ M + P+ T
Sbjct: 797 AVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMT 856
Query: 210 FVSLLVGCGRSGNLRMGRRIH------GL-------------------------IFKRAS 238
+ L+ R N ++G +H GL +F
Sbjct: 857 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 916
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRK 298
+L N+++D Y K + A+ +F E+ ++D+V+W+S+I G V+ ++L +F +
Sbjct: 917 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 976
Query: 299 MHSSGI-EPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
M G + + V + SV+ ACA++G L+ G+ VH YI + + + T+++DMYAKCG
Sbjct: 977 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 1036
Query: 358 CIERALQTFNEMPCK--NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAI 415
I A F K + WNA++ GLA HG +L+ F +M P+E+TFL +
Sbjct: 1037 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 1096
Query: 416 LTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA 475
L AC H GLV + +F + ++ P+ EHY CM D+L RAGL+ +A + MP+
Sbjct: 1097 LAACSHGGLVKEAWHFFKSL--KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 1154
Query: 476 PDVLILGALLSACKDKGILKL 496
P +LGALL+ C + G L+L
Sbjct: 1155 PTGSMLGALLNGCINHGNLEL 1175
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 180/369 (48%), Gaps = 39/369 (10%)
Query: 58 VDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLK 117
VD+ FL + ++ +N +I ++ S P+ +I Y Q++R G LPD T+P ++K
Sbjct: 804 VDYAYKFLSKLS-DPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMK 862
Query: 118 SCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP------ 171
S + G +H V+K GL DL++ N+L+H+YG D SA K+FDEMP
Sbjct: 863 SSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVT 922
Query: 172 -------------------------VRDVVSWTSIIAGYARAGLFDEAVTMFLSM----N 202
RDVV+W+S+I GY + G +++A+ +F M +
Sbjct: 923 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 982
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAK 262
+ N T VS++ C G L G+ +H I +++ +L+DMY KC + +A
Sbjct: 983 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 1042
Query: 263 QIFH--ELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
+F+ + + D + W +II GL +ESL LF KM S I+PD + +L+AC++
Sbjct: 1043 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 1102
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW-NA 379
G + + + + MVD+ ++ G ++ A +EMP K + A
Sbjct: 1103 GGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGA 1162
Query: 380 LLNGLAMHG 388
LLNG HG
Sbjct: 1163 LLNGCINHG 1171
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 204/462 (44%), Gaps = 49/462 (10%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
++ LI + + R A + + ++V G P T+ +M+ I G+ +
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVF--DEMPVRDV----VSWTSIIAGYARAGL 190
+ D+ SL+H G+C R + +F +EM +D +++ ++I G + G
Sbjct: 677 EDEKNPDVITYTSLIH--GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRI-HGLIFKRASKVSLEASN 246
EA+ F M +EP++A ++SL+ S N+ G I ++ K VS++ N
Sbjct: 735 SGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD-RN 793
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
++ + V + + A + +L W +I G + P++S+ ++ +M G+ P
Sbjct: 794 YMLAVNVTSD-VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLP 852
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D + ++ + + + + G +H + + ++ D+ I ++ MY A + F
Sbjct: 853 DHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLF 912
Query: 367 NEMPCKNIFTWNALLNGLAMHG------------------------RGYA-------ALK 395
+EMP KN+ TWN++L+ A G GY AL+
Sbjct: 913 DEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALE 972
Query: 396 FFEEMVGEGST-PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
F++M+ GS+ NEVT ++++ AC H G +++G+ ++ L+ L+ + D
Sbjct: 973 IFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ--TSLID 1030
Query: 455 LLCRAGLLDEAL-MLVRTMPMAPDVLILGALLSACKDKGILK 495
+ + G + +A + R D L+ A++ G ++
Sbjct: 1031 MYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 1072
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 42/298 (14%)
Query: 39 RNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYR 98
+N + ++D + KS D V F + + V ++ +S+I Y A+ +
Sbjct: 918 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW--SSMIDGYVKRGEYNKALEIFD 975
Query: 99 QIVRNGF-LPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC 157
Q++R G + T +++ +CA + G +H ++ + L + +Q SL+ +Y C
Sbjct: 976 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 1035
Query: 158 DDCRSAGKVFDEMPVR--DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVS 212
A VF V+ D + W +II G A G E++ +F M ++P+ TF+
Sbjct: 1036 GSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 1095
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
LL C G ++ + + ++ E ++D+ + + +A E+P
Sbjct: 1096 LLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP--- 1152
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
I+P G +L ++L+ C N G+L+ V
Sbjct: 1153 -------------------------------IKPTGSMLGALLNGCINHGNLELAETV 1179
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 43/276 (15%)
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKM 299
AS A +D +K E + ++F ++ D++++ +I L + R E+ +LF +M
Sbjct: 581 ASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM 640
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
S G++P S++ G++D G CI
Sbjct: 641 VSKGLKPTVATYNSMIDGWCKEGEIDRG----------------------------LSCI 672
Query: 360 ERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
R + + ++ T+ +L++GL GR A+ + EM G+ PN +TF+A++
Sbjct: 673 VR---MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM------P 473
C G + YF +M ++ + P Y + + ++ + R M P
Sbjct: 730 CKCGWSGEALVYFREM--EEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Query: 474 MAPDVLILGALLSACKDKGILKLPTRYTRPPHRAWD 509
++ D + A+ K ++ + PP+ W+
Sbjct: 788 VSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWN 823
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 48/280 (17%)
Query: 233 IFKRASKVSLEASNAL---MDMYVKCECLSEAKQIFHELPKKDIVS----WTSIISGLVQ 285
+ K +K L S++L ++ VK + A + H++ + ++ + +II G+ +
Sbjct: 427 LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 286 CQRPKESLVLFRKMHSSGIEPDGVILTSVL----SACANVGDLD-------YG--RWVH- 331
R +ESL L +M +G+EP L + C VG LD YG W+
Sbjct: 487 EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKH 546
Query: 332 ------------------EYIDRRAIKRDI-HI--GTAMVDMYAKCGCIERALQTFNEM- 369
+Y+D A + + H+ TA +D K ++R L+ F ++
Sbjct: 547 TTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 370 ---PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVD 426
C ++ ++ L+ L R A F EMV +G P T+ +++ C G +D
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 427 KGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
+G +M + N P + Y + LC +G EA+
Sbjct: 667 RGLSCIVRMYEDEKN--PDVITYTSLIHGLCASGRPSEAI 704
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 51/508 (10%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFF----GKSVDFVDFGCGFLKQCDWRVSSFPFNSLIS 82
+IH +V SG + + V ++ + G S D V + Q D V+S+ N+++S
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRD--VASW--NTVVS 257
Query: 83 SYAGSDRPQIAILCYRQIVR-NGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV 141
S + A + ++ R GF DS+T +L SC + G ++HG I++GL+
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 142 CDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM 201
+L V N+L+ Y D + +++ M +D V++T +I Y G+ D AV +F ++
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 202 NVEPNTATFVSLLVG-----------------------------------CGRSGNLRMG 226
E NT T+ +L+ G CG ++
Sbjct: 378 -TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVS 436
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK--DIVSWTSIISGLV 284
+IHG K + + AL+DM +CE +++A+++F + P + TSII G
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 285 QCQRPKESLVLF-RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ P +++ LF R + + D V LT +L+ C +G + G +H Y + DI
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
+G +++ MYAKC + A++ FN M ++ +WN+L++ + G AL + M +
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
Query: 404 GSTPNEVTFLAILTA--CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
P+ +T +++A S + R F M Y++ P EHY +L GL
Sbjct: 617 EIKPDIITLTLVISAFRYTESNKLSSCRDLFLSM-KTIYDIEPTTEHYTAFVRVLGHWGL 675
Query: 462 LDEALMLVRTMPMAPDVLILGALLSACK 489
L+EA + +MP+ P+V +L ALL +C+
Sbjct: 676 LEEAEDTINSMPVQPEVSVLRALLDSCR 703
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 157/320 (49%), Gaps = 41/320 (12%)
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN----V 203
N+L+ Y R A VF + VVS+T++I+G++R L EA+ +F M V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 204 EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS--EA 261
+PN TFV++L C R +G +IHGLI K S+ SN+LM +Y K S +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 262 KQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILTSVLSACAN 320
++F E+P++D+ SW +++S LV+ + ++ LF +M+ G D L+++LS+C +
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 321 VGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK------------------------- 355
L GR +H R + +++ + A++ Y+K
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 356 ------CGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
G ++ A++ F + KN T+NAL+ G +G G ALK F +M+ G +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 410 VTFLAILTACCHSGLVDKGR 429
+ + + AC GLV + +
Sbjct: 418 FSLTSAVDAC---GLVSEKK 434
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 182/397 (45%), Gaps = 49/397 (12%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFL-PDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ +LIS ++ + A+ + ++ + G + P+ YTF A+L +C G+QIHG++
Sbjct: 148 YTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLI 207
Query: 136 IKMGLVCDLYVQNSLVHLY-----GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
+K G + ++V NSL+ LY CDD K+FDE+P RDV SW ++++ + G
Sbjct: 208 VKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASWNTVVSSLVKEGK 264
Query: 191 FDEAVTMFLSMN-VEP---NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+A +F MN VE ++ T +LL C S L GR +HG + L +N
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 247 ALMDMYV------KCECLSE-------------------------AKQIFHELPKKDIVS 275
AL+ Y K E L E A +IF + +K+ ++
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 276 WTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYID 335
+ ++++G + ++L LF M G+E LTS + AC V + +H +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 336 RRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNA---LLNGLAMHGRGYA 392
+ + I TA++DM +C + A + F++ P N+ + A ++ G A +G
Sbjct: 445 KFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP-SNLDSSKATTSIIGGYARNGLPDK 503
Query: 393 ALKFFEEMVGEGST-PNEVTFLAILTACCHSGLVDKG 428
A+ F + E +EV+ IL C G + G
Sbjct: 504 AVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 13/349 (3%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
++ +N+L++ + + A+ + +++ G ++ + + +C + QIH
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP--VRDVVSWTSIIAGYARAGL 190
G IK G + +Q +L+ + C+ A ++FD+ P + + TSII GYAR GL
Sbjct: 441 GFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGL 500
Query: 191 FDEAVTMFLSMNVEP----NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
D+AV++F E + + +L CG G MG +IH K + N
Sbjct: 501 PDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN 560
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+L+ MY KC +A +IF+ + + D++SW S+IS + + E+L L+ +M+ I+P
Sbjct: 561 SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKP 620
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG----TAMVDMYAKCGCIERA 362
D + LT V+SA ++ + I DI TA V + G +E A
Sbjct: 621 DIITLTLVISAFRYTESNKLSSCRDLFLSMKTI-YDIEPTTEHYTAFVRVLGHWGLLEEA 679
Query: 363 LQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVG-EGSTPNE 409
T N MP + + ALL+ +H A + + ++ + TP+E
Sbjct: 680 EDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSE 728
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 9/241 (3%)
Query: 202 NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFK-RASKVSLEASNALMDMYVKCECLSE 260
++E F LL + ++ + + +H K R K L NAL+ Y+K E
Sbjct: 75 DIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRL--GNALISTYLKLGFPRE 132
Query: 261 AKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG-IEPDGVILTSVLSACA 319
A +F L +VS+T++ISG + E+L +F +M +G ++P+ ++L+AC
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK---CGCIERALQTFNEMPCKNIFT 376
V G +H I + + + +++ +Y K C + L+ F+E+P +++ +
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVAS 251
Query: 377 WNALLNGLAMHGRGYAALKFFEEMVG-EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
WN +++ L G+ + A F EM EG + T +L++C S ++ +GR+ +
Sbjct: 252 WNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRA 311
Query: 436 I 436
I
Sbjct: 312 I 312
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 178/359 (49%), Gaps = 38/359 (10%)
Query: 175 VVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSL-LVGCGRSGNLRMGRRIH 230
++S T ++ YA G ++A+ +FL M+ P A SL L C + +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPK 290
K + AL+DMY KC +S A+++F E+P+++ V W ++IS C + K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 291 ESLVLF---------------------------------RKMHSSGIEPDGVILTSVLSA 317
E++ L+ RKM +P+ + L +++SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
C+ +G + +H Y R I+ + + +V+ Y +CG I F+ M +++ W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
++L++ A+HG +ALK F+EM TP+++ FL +L AC H+GL D+ YF +M
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM-Q 310
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
Y L +HY C+ D+L R G +EA +++ MP P GALL AC++ G ++L
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 157/351 (44%), Gaps = 45/351 (12%)
Query: 81 ISSYAGSDRPQIAILCYRQIVRNGFLP-DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMG 139
+SSYA + A+ + Q+ + LP D++ F LKSCA G +H +K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 140 LVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFL 199
+ + +V +L+ +YG C A K+FDE+P R+ V W ++I+ Y G EAV ++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 200 SMNVEPNTATF------------------------------------VSLLVGCGRSGNL 223
+M+V PN ++F ++L+ C G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGL 283
R+ + IH F+ + + + L++ Y +C + + +F + +D+V+W+S+IS
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD----YGRWVHEYIDRRAI 339
+ +L F++M + + PD + +VL AC++ G D Y + + RA
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHGR 389
K + +VD+ ++ G E A + MP K TW ALL +G
Sbjct: 319 KDHY---SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 170/327 (51%), Gaps = 35/327 (10%)
Query: 166 VFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGN 222
VFD M +++V+W S+++G + A L +A + + M ++P+ T+ SL G G
Sbjct: 14 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 73
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISG 282
+ G + ++ ++VSWT+I SG
Sbjct: 74 PEKALDVIGKMKEKG-------------------------------VAPNVVSWTAIFSG 102
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
+ + +L +F KM G+ P+ ++++L + L G+ VH + R+ + D
Sbjct: 103 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 162
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
++ TA+VDMY K G ++ A++ F + K++ +WN +L G AM GRG + F M+
Sbjct: 163 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 222
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G P+ +TF ++L+ C +SGLV +G KYF+ M S +Y + P +EH CM DLL R+G L
Sbjct: 223 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS-RYGIIPTIEHCSCMVDLLGRSGYL 281
Query: 463 DEALMLVRTMPMAPDVLILGALLSACK 489
DEA ++TM + PD I GA LS+CK
Sbjct: 282 DEAWDFIQTMSLKPDATIWGAFLSSCK 308
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 121/263 (46%), Gaps = 15/263 (5%)
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSA----GKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
K G+ D NSL Y A GK+ ++ +VVSWT+I +G ++ G F
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 193 EAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A+ +F+ M E PN AT +LL G L G+ +HG ++ + AL+
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 170
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
DMY K L A +IF + K + SW ++ G R +E + F M +G+EPD +
Sbjct: 171 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAI 230
Query: 310 ILTSVLSACANVGDLDYGRWVHEYID----RRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
TSVLS C N G + G W +Y D R I I + MVD+ + G ++ A
Sbjct: 231 TFTSVLSVCKNSGLVQEG-W--KYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 287
Query: 366 FNEMPCKNIFT-WNALLNGLAMH 387
M K T W A L+ +H
Sbjct: 288 IQTMSLKPDATIWGAFLSSCKIH 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A+ + ++ G P++ T +LK + G ++HG ++ L+CD YV +LV
Sbjct: 112 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 171
Query: 153 LYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTAT 209
+YG D +SA ++F + + + SW ++ GYA G +E + F L +EP+ T
Sbjct: 172 MYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 231
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKV-SLEASNALMDMYVKCECLSEAKQIFHEL 268
F S+L C SG ++ G + L+ R + ++E + ++D+ + L EA +
Sbjct: 232 FTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 291
Query: 269 P-KKDIVSWTSIIS 281
K D W + +S
Sbjct: 292 SLKPDATIWGAFLS 305
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 108/286 (37%), Gaps = 71/286 (24%)
Query: 251 MYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
MY+K L A+ +F + K+IV+W S++SGL K++ L +M GI+PD +
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
S+ S YA G E+AL +M
Sbjct: 61 WNSLASG-----------------------------------YATLGKPEKALDVIGKMK 85
Query: 371 CK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT-----ACCH 421
K N+ +W A+ +G + +G ALK F +M EG PN T +L + H
Sbjct: 86 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 145
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYG------------------------CMTDLLC 457
SG G +I Y + ++ YG CM
Sbjct: 146 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 205
Query: 458 RAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILKLPTRY 500
G +E + M M PD + ++LS CK+ G+++ +Y
Sbjct: 206 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKY 251
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 223/473 (47%), Gaps = 42/473 (8%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
+++H + G V N + ++ F+ S D F + D V S+ NSL+S Y
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISW--NSLVSGYV 132
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLV-CDL 144
S R Q I + ++ R+ P+ ++F A L +CA G IH ++K+GL ++
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 145 YVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE 204
V N L+ +YG C G D+AV +F M E
Sbjct: 193 VVGNCLIDMYGKC-------------------------------GFMDDAVLVFQHME-E 220
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
+T ++ +++ C R+G L +G F + N L+D +VK + A Q+
Sbjct: 221 KDTVSWNAIVASCSRNGKLELGL----WFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL 324
++P + SW +I++G V ++ E+ F KMHSSG+ D L+ VL+A A + +
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGL 384
+G +H + + + + +A++DMY+KCG ++ A F MP KN+ WN +++G
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 385 AMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGL-VDKGRKYFNQMISQQYNL 442
A +G A+K F ++ E P+ TFL +L C H + ++ YF MI+ +Y +
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMIN-EYRI 455
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILK 495
P +EH + + + G + +A +++ D + ALL AC + LK
Sbjct: 456 KPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLK 508
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 173/398 (43%), Gaps = 46/398 (11%)
Query: 99 QIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
+++ +G PD+ +L+ + + Q+HG V K G V + + NSL+ Y D
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLV 215
A KVFDEMP DV+SW S+++GY ++G F E + +FL + +V PN +F + L
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 216 GCGRSGNLRMGRRIHGLIFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIV 274
C R +G IH + K K ++ N L+DMY KC + +A +F + +KD V
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 275 SWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYI 334
SW +I+ ++C+ G L+ G W +
Sbjct: 225 SWNAIV-----------------------------------ASCSRNGKLELGLWFFHQM 249
Query: 335 DRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAAL 394
D ++D + K G A Q ++MP N +WN +L G + A
Sbjct: 250 P----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 395 KFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
+FF +M G +E + +L A +V G + + L R+ + D
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGS--LIHACAHKLGLDSRVVVASALID 363
Query: 455 LLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKG 492
+ + G+L A ++ TMP ++++ ++S G
Sbjct: 364 MYSKCGMLKHAELMFWTMPR-KNLIVWNEMISGYARNG 400
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 177 SWTSIIAGYARAGLFD--EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIF 234
SW++I+ AR G A ++ +P+ + V LL G G + + R++HG +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 235 KRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV 294
K + SN+LM Y + L +A ++F E+P D++SW S++SG VQ R +E +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR-DIHIGTAMVDMY 353
LF ++H S + P+ T+ L+ACA + G +H + + +++ ++ +G ++DMY
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
KCG ++ A+ F M K+ +WNA++ + +G+ L FF +M P+ VT+
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYN 258
Query: 414 AILTACCHSGLVDKGRKYFNQM 435
++ A SG + + + M
Sbjct: 259 ELIDAFVKSGDFNNAFQVLSDM 280
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 145/330 (43%), Gaps = 22/330 (6%)
Query: 40 NDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW-RVSSFPFNSLISSYAGSDRPQIAILCYR 98
+ + ++D F KS DF + F D +S +N++++ Y S++ A +
Sbjct: 253 DTVTYNELIDAFVKSGDFNN---AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 99 QIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
++ +G D Y+ +L + A + G IH K+GL + V ++L+ +Y C
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 159 DCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE----PNTATFVSLL 214
+ A +F MP ++++ W +I+GYAR G EA+ +F + E P+ TF++LL
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 215 VGCGRSG---NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP-K 270
C + +G +I + K S+E +L+ + + +AKQ+ E
Sbjct: 430 AVCSHCEVPMEVMLG-YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFG 488
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
D V+W +++ + K + + KM G L V+S + RW
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAY----HERW- 543
Query: 331 HEYIDRRAIKRDI----HIGTAMVDMYAKC 356
E R I R+ +G++ +D KC
Sbjct: 544 REVGQIRKIMRESGVLKEVGSSWIDSRTKC 573
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 234/510 (45%), Gaps = 49/510 (9%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVD-----------------------FGC 62
K +HAQL+ +G VR R + + KS ++ F
Sbjct: 24 KIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKN 83
Query: 63 GFLKQCDWRVSSFP------FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFP--A 114
G+L P +N++IS + I + + R P +TF A
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 115 MLKSCAMFLGIGEGMQIHGIVIKMGLV-CDLYVQNSLVHLY---GVCDDCRSAGKVFDEM 170
L +C + G QIHG I G+ +L V NS++ +Y GV D A VF M
Sbjct: 144 SLVTC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD---YALSVFLTM 195
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFL---SMNVEPNTATFVSLLVGCGRSGNLRMGR 227
RDVVSW +I + +G + A+ F M ++P+ T ++ C L G+
Sbjct: 196 EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQ 287
+ L K + A +DM+ KC L ++ ++F EL K D V S+I
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC 315
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGT 347
+++L LF + + PD +SVLS+ N LD+G VH + + D + T
Sbjct: 316 CGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 348 AMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-T 406
++++MY K G ++ A+ F + K++ WN ++ GLA + R +L F +++ S
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
P+ VT + IL ACC++G V++G + F+ M + + ++P EHY C+ +LLCR G+++EA
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSM-EKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 467 MLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ +P P I +L A D G +L
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRL 523
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 189/410 (46%), Gaps = 38/410 (9%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSY----------TFPAMLKSCAMF 122
SS F+ L++ S P +A + + Q++ GF+ +Y +++ + +F
Sbjct: 3 SSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLF 62
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
I + I V GL + Y+ N+L +FDEMP RDVVSW ++I
Sbjct: 63 DDIPDKNTITWNVCLKGLFKNGYLNNAL--------------DLFDEMPERDVVSWNTMI 108
Query: 183 AGYARAGLFDEAVTMFLSMN---VEPNTATFVSL--LVGCGRSGNLRMGRRIHG-LIFKR 236
+G G + + +F M + P TF L LV C +R G +IHG I
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC-----VRHGEQIHGNAICSG 163
Query: 237 ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLF 296
S+ +L N++MDMY + A +F + +D+VSW +I + +L F
Sbjct: 164 VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQF 223
Query: 297 RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKC 356
M I+PD ++ V+S C+++ +L G+ + + + A +DM++KC
Sbjct: 224 WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKC 283
Query: 357 GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
++ +++ F E+ + N+++ + H G AL+ F + + P++ TF ++L
Sbjct: 284 NRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
++ ++ ++D G + +I ++L + + ++ + G +D A+
Sbjct: 344 SS-MNAVMLDHGADVHSLVIKLGFDLDTAVA--TSLMEMYFKTGSVDLAM 390
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 147/243 (60%), Gaps = 6/243 (2%)
Query: 265 FHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS-SGIEPDGVILTSVLSACANVGD 323
++P + +VSWT+II G + +PKE+++LF +M + I+P+ + + ++L A N+GD
Sbjct: 46 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 105
Query: 324 LDYGRWVHEYIDRRA-IKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC--KNIFTWNAL 380
L VH Y+ +R + DI + +++D YAKCGCI+ A + F E+P KN+ +W +
Sbjct: 106 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 165
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG-RKYFNQMISQQ 439
++ A+HG G A+ F++M G PN VT +++L AC H GL ++ ++FN M+++
Sbjct: 166 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE- 224
Query: 440 YNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKLPTR 499
Y ++P ++HYGC+ D+L R G L+EA + +P+ ++ LL AC +L R
Sbjct: 225 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 284
Query: 500 YTR 502
TR
Sbjct: 285 VTR 287
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 126/231 (54%), Gaps = 10/231 (4%)
Query: 167 FDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGN 222
++MP R VVSWT+II GYAR EA+ +F M ++PN T +++L G+
Sbjct: 46 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 105
Query: 223 LRMGRRIHGLIFKRA-SKVSLEASNALMDMYVKCECLSEAKQIFHELP--KKDIVSWTSI 279
L+M +H + KR + +N+L+D Y KC C+ A + F E+P +K++VSWT++
Sbjct: 106 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 165
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVG--DLDYGRWVHEYIDRR 337
IS KE++ +F+ M G++P+ V + SVL+AC++ G + ++ + + ++
Sbjct: 166 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 225
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKN-IFTWNALLNGLAMH 387
I D+ +VDM + G +E A + E+P + W LL +++
Sbjct: 226 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVY 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 10/216 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVR-NGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++I YA D+P+ AIL + ++V + P+ T A+L + + +H V
Sbjct: 57 WTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYV 116
Query: 136 IKMGLV-CDLYVQNSLVHLYGVCDDCRSAGKVFDEMP--VRDVVSWTSIIAGYARAGLFD 192
K G V CD+ V NSL+ Y C +SA K F E+P +++VSWT++I+ +A G+
Sbjct: 117 GKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGK 176
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSG--NLRMGRRIHGLIFKRASKVSLEASNA 247
EAV+MF M ++PN T +S+L C G + ++ + ++
Sbjct: 177 EAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGC 236
Query: 248 LMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISG 282
L+DM + L EA++I E+P ++ V W ++
Sbjct: 237 LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 272
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 158/322 (49%), Gaps = 35/322 (10%)
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
P++ TFVSL+ ++ + G+ HG K L N+LM MY C L AK++
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 265 FHELPKKDIVSWTSIISGLVQ-------------------------------CQRPKESL 293
F E+PK+DIVSW SII+G+V+ P S+
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
LFR+M +G + + L +L+AC L GR VH + R + + I TA++DMY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 354 AKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
KC + A + F+ + +N TWN ++ +HGR L+ FE M+ P+EVTF+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 414 AILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
+L C +GLV +G+ Y++ M+ ++ + P H CM +L AG +EA ++ +P
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMV-DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLP 414
Query: 474 ---MAPDVLILGALLSACKDKG 492
+ P+ LLS+ + G
Sbjct: 415 DEDVTPESTKWANLLSSSRFTG 436
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 181/397 (45%), Gaps = 45/397 (11%)
Query: 16 IRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDF---FGKSVDFVDFGCGFLKQCDWRV 72
+ N++ ++HA+L+TSG + R++ FG S V K
Sbjct: 29 VEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKL----- 83
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
+ N + +Y S P+ A+ Y I+R GF+PDSYTF +++ + G H
Sbjct: 84 --YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAG--- 189
G IK G L VQNSL+H+Y C A K+F E+P RD+VSW SIIAG R G
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 190 ----LFDE------------------------AVTMFLSM---NVEPNTATFVSLLVGCG 218
LFDE ++++F M + N +T V LL CG
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 219 RSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTS 278
RS L+ GR +H + + S+ AL+DMY KC+ + A++IF L ++ V+W
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 279 IISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY-IDRR 337
+I RP+ L LF M + + PD V VL CA G + G+ + +D
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEF 381
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI 374
IK + M ++Y+ G E A + +P +++
Sbjct: 382 QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 147/315 (46%), Gaps = 21/315 (6%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N +IS+Y G++ P ++I +R++VR GF + T +L +C + EG +H +I
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVT 196
+ L + + +L+ +YG C + A ++FD + +R+ V+W +I + G + +
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 197 MFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNALMDMY 252
+F +M + P+ TFV +L GC R+G + G+ + L+ K + + ++Y
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 253 VKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV--- 309
EA++ LP +D+ ++ + L+ R + L + S IE D +
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK 457
Query: 310 ---ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA-----KCGCIER 361
+L ++ S D++ V E + R I R G +VD+ + GC E
Sbjct: 458 YYHLLMNIYSVTGRWEDVNR---VREMVKERKIGRI--PGCGLVDLKEIVHGLRLGCKE- 511
Query: 362 ALQTFNEMPCKNIFT 376
A + F E + ++
Sbjct: 512 AEKVFTETSLEKCYS 526
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 31/186 (16%)
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
PK++L + + G PD S++S +D G+ H + + + + +
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 349 MVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFE---------- 398
++ MY CG ++ A + F E+P ++I +WN+++ G+ +G AA K F+
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 399 ---------------------EMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
EMV G NE T + +L AC S + +GR +I
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 438 QQYNLS 443
N S
Sbjct: 279 TFLNSS 284
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 140/248 (56%), Gaps = 6/248 (2%)
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE-P 306
L+ Y+K EA +F +P++ +V+W ++I G Q R +E++ F M G+ P
Sbjct: 44 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 103
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR-DIHIGTAMVDMYAKCGCIERALQT 365
+ ++A +N+ G+ +H + KR ++ + +++ Y+KCG +E +L
Sbjct: 104 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 163
Query: 366 FN--EMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHS 422
FN E +NI +WN+++ G A +GRG A+ FE+MV + + PN VT L +L AC H+
Sbjct: 164 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 223
Query: 423 GLVDKGRKYFNQMISQQYNLSP-RLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLIL 481
GL+ +G YFN+ ++ + + LEHY CM D+L R+G EA L+++MP+ P +
Sbjct: 224 GLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFW 283
Query: 482 GALLSACK 489
ALL C+
Sbjct: 284 KALLGGCQ 291
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 16/253 (6%)
Query: 149 SLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---- 204
+L+ Y + A +F MP R VV+W ++I G+++ G +EAV F+ M E
Sbjct: 43 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 102
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK-VSLEASNALMDMYVKCECLSEAKQ 263
PN +TF + + G+ IH K K ++ N+L+ Y KC + ++
Sbjct: 103 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 162
Query: 264 IFHEL--PKKDIVSWTSIISGLVQCQRPKESLVLFRKM-HSSGIEPDGVILTSVLSACAN 320
F++L +++IVSW S+I G R +E++ +F KM + + P+ V + VL AC +
Sbjct: 163 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 222
Query: 321 VGDLDYG-----RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NI 374
G + G + V++Y D ++ + + MVDM ++ G + A + MP I
Sbjct: 223 AGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGI 280
Query: 375 FTWNALLNGLAMH 387
W ALL G +H
Sbjct: 281 GFWKALLGGCQIH 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 23/231 (9%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGF-LPDSYTFPAMLKSCAMFLGIGEGMQI 131
S +N++I ++ + R + A+ + ++R G +P+ TFP + + + G G I
Sbjct: 68 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 127
Query: 132 HGIVIK-MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD--EMPVRDVVSWTSIIAGYARA 188
H IK +G +++V NSL+ Y C + + F+ E R++VSW S+I GYA
Sbjct: 128 HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHN 187
Query: 189 GLFDEAVTMFLSM----NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK----- 239
G +EAV MF M N+ PN T + +L C +G ++ G + F +A
Sbjct: 188 GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGY----MYFNKAVNDYDDP 243
Query: 240 --VSLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQ 287
+ LE ++DM + EA+++ +P I W +++ G CQ
Sbjct: 244 NLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG---CQ 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
T ++ Y K E AL F MP +++ TWNA++ G + GR A+ F +M+ EG
Sbjct: 42 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 101
Query: 407 -PNEVTFLAILTA 418
PNE TF +TA
Sbjct: 102 IPNESTFPCAITA 114
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 200/413 (48%), Gaps = 20/413 (4%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
N L++ + S +P +A ++++ GF PD TF +++ + + E M + +++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP---VR-DVVSWTSIIAGYARAGLFDE 193
MG+ D+ + +++ A +FD+M +R DVV +TS++ G +G + +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A ++ M ++P+ TF +L+ + G ++ + + + ++ +L++
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 251 MYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+ C+ EA+Q+F+ + K D+V++TS+I+G +C++ +++ +F +M G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
+ + T+++ VG + + V ++ R + +I ++ G +++AL F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 367 NEMPCK-------NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+M + NI+T+N LL+GL +G+ AL FE+M +T+ I+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
C +G V F + S+ + P + Y M L R GL EA +L R M
Sbjct: 471 CKAGKVKNAVNLFCSLPSK--GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 22/330 (6%)
Query: 162 SAGKVFDEMPVRDVVSWTSIIAGY---ARAGL----FDEAVTMFLSMNVE----PNTATF 210
++GK + D+ W Y R GL F+EA+ +F M VE P+ F
Sbjct: 17 NSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM-VESRPLPSIIDF 75
Query: 211 VSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK 270
LL + + + + L N LM+ + + A ++ K
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 271 ----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
DIV++TS+I+G R +E++ + +M GI+PD V+ T+++ + G ++Y
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 327 GRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLN 382
+ + ++ I+ D+ + T++V+ G A M + ++ T+NAL++
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 383 GLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
G+ A + + EM+ PN T+ +++ C G VD+ R+ F M ++
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK--GC 313
Query: 443 SPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
P + Y + + C+ +D+A+ + M
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 120/277 (43%), Gaps = 49/277 (17%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN+LI ++ + A Y +++R P+ +T+ +++ M + E Q+ ++
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAG--- 189
G D+ SL++ + C A K+F EM + + +++T++I G+ + G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 190 LFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLR--------MGRR------------- 228
+ E + +S V PN T+ LL +G ++ M +R
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 229 --IHGL-----------IFKRASKVSLEASNALMDMYVKCEC----LSEAKQIFHELPKK 271
+HGL +F+ K ++ + ++ C + A +F LP K
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 272 ----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
++V++T++ISGL + E+ VLFRKM G+
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 205/469 (43%), Gaps = 26/469 (5%)
Query: 51 FGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSY 110
K VD + F +K+ ++ ++ N+LI S+ + + +R++ NG P Y
Sbjct: 164 LAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY 223
Query: 111 TFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM 170
T+ ++ + + ++ ++ + D+ N+++ Y + A + +M
Sbjct: 224 TYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM 283
Query: 171 PVR----DVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNL 223
R D +++ ++I F V ++ M+ ++ F ++ G + G L
Sbjct: 284 ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKL 343
Query: 224 RMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSI 279
G + + ++ SK ++ L+D Y K + +A ++ H + K D+V+++ +
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 280 ISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAI 339
++GL + R +E+L F G+ + + +S++ G +D + E + +
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 340 KRDIHIGTAMVDMYAKCGCIERALQTFNEMP----C-KNIFTWNALLNGLAMHGRGYAAL 394
RD + A++D + K ++ A+ F M C + ++T+ LL+G+ R AL
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 395 KFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTD 454
K ++ M+ +G TP F A+ T C SG V + K +++ L E M +
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED---MIN 580
Query: 455 LLCRAGLLDEALMLV-------RTMPMAPDVLILGALLSACKDKGILKL 496
LC+AG + EA L R +P +++ AL K +KL
Sbjct: 581 TLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 190/428 (44%), Gaps = 48/428 (11%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
+S + +LI S + +R A+ ++ G +PD+ TF ++ F I E ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
++ G D L++ G+C R +A +F +P ++V + ++I G+ G
Sbjct: 311 NRMLIRGFAPDDITYGYLMN--GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 191 FDEAVT----MFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
D+A M S + P+ T+ SL+ G + G + + + + + K ++ +
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 247 ALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
L+D + K + EA + +E+ K + V + +IS + R E++ +FR+M
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G +PD S++S V ++ + W + RD+
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALW---------LLRDM------------------- 520
Query: 363 LQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHS 422
+E N T+N L+N G A K EMV +GS +E+T+ +++ C +
Sbjct: 521 ---ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 423 GLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM---APDVL 479
G VDK R F +M+ + +P + + LCR+G+++EA+ + M + PD++
Sbjct: 578 GEVDKARSLFEKMLRDGH--APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 480 ILGALLSA 487
+L++
Sbjct: 636 TFNSLING 643
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 188/410 (45%), Gaps = 24/410 (5%)
Query: 77 FNSLISSYAGSDR-PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
FN +I DR + A + R ++R GF PD T+ ++ + + +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 136 IKMGLVCDLYVQNSLVH---LYGVCDDCRS--AGKVFDEMPVRDVVSWTSIIAGYARAGL 190
K +V + N+L+H +G DD ++ + V V DV ++ S+I GY + GL
Sbjct: 349 PKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
A+ + M +PN ++ L+ G + G + + + K + N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+ + K + EA +IF E+P+K D+ ++ S+ISGL + K +L L R M S G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+ + V ++++A G++ R + + + D +++ + G +++A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 364 QTFNEM----PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
F +M + + N L+NGL G A++F +EMV GSTP+ VTF +++
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
C +G ++ G F ++ Q + P + + LC+ G + +A +L+
Sbjct: 645 CRAGRIEDGLTMFRKL--QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 198/432 (45%), Gaps = 40/432 (9%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
++S+ SS+A D L RQ+VR G L + + F E M HG V
Sbjct: 91 YSSVNSSFALEDVESNNHL--RQMVRTGELEEGFKFL-------------ENMVYHGNVP 135
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFD 192
D+ +L+ + R A K+ + + V DV+++ +I+GY +AG +
Sbjct: 136 ------DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 193 EAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
A+++ M+V P+ T+ ++L SG L+ + + +R + L++
Sbjct: 190 NALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT 249
Query: 253 VKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ + A ++ E+ + D+V++ +++G+ + R E++ M SSG +P+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 309 VILTSVLSACANVGD-LDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+ +L + + G +D + + + + R+ + +++ + G + RA+
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 368 EMP---CK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSG 423
+MP C+ N ++N LL+G + A+++ E MV G P+ VT+ +LTA C G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 424 LVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV---RTMPMAPDVLI 480
V+ + NQ+ S+ SP L Y + D L +AG +A+ L+ R + PD +
Sbjct: 429 KVEDAVEILNQLSSK--GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 481 LGALLSACKDKG 492
+L+ +G
Sbjct: 487 YSSLVGGLSREG 498
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 180/418 (43%), Gaps = 34/418 (8%)
Query: 77 FNSLISSY--AGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+N +IS Y AG +++L R PD T+ +L+S + + M++
Sbjct: 175 YNVMISGYCKAGEINNALSVL-----DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAG-----KVFDEMPVR----DVVSWTSIIAGY 185
+++ D+ L+ CR +G K+ DEM R DVV++ ++ G
Sbjct: 230 MLQRDCYPDVITYTILIEAT-----CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 186 ARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSL 242
+ G DEA+ M +PN T +L +G ++ + ++ S+
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 243 EASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRK 298
N L++ + L A I ++P+ + +S+ ++ G + ++ ++ +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
M S G PD V ++L+A G ++ + + + + ++D AK G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 359 IERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
+A++ +EM K++ T+++L+ GL+ G+ A+KFF E G PN VTF +
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 415 ILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
I+ C S D+ + MI++ P Y + + L G+ EAL L+ +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINR--GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 52/386 (13%)
Query: 102 RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCR 161
R G P+SY + +++ + E + +I+ G++ D V +L+ + D R
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 162 SAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLL 214
+A K F EM R DV+++T+II+G+ + G EA +F M +EP++ TF L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 215 VGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK---- 270
G ++G+++ R+H + + ++ L+D K L A ++ HE+ K
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
+I ++ SI++GL + +E++ L + ++G+ D V T+++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM--------------- 976
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAM 386
D Y K G +++A + EM K I T+N L+NG +
Sbjct: 977 --------------------DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016
Query: 387 HGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRL 446
HG K M+ +G PN TF +++ C + + M S+ + P
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR--GVGPDG 1074
Query: 447 EHYGCMTDLLCRAGLLDEALMLVRTM 472
+ Y + C+A + EA L + M
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEM 1100
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 16/326 (4%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIH 230
DV+S+++++ GY R G D+ + M ++PN+ + S++ R L
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQC 286
+ ++ L+D + K + A + F+E+ +DI +++T+IISG Q
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
E+ LF +M G+EPD V T +++ G + VH ++ + ++
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 347 TAMVDMYAKCGCIERALQTFNEM----PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
T ++D K G ++ A + +EM NIFT+N+++NGL G A+K E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G + VT+ ++ A C SG +DK ++ +M+ + L P + + + + C G+L
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGML 1020
Query: 463 DEALMLVRTM---PMAPDVLILGALL 485
++ L+ M +AP+ +L+
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 19/315 (6%)
Query: 190 LFDEAVTMFLSMNVEPNT-ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
FD V + +P F +LV G LR RR+ + +S+++ N
Sbjct: 603 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGL---LREARRVFEKMLNYGLVLSVDSCNVY 659
Query: 249 MDMYVK-CECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+ K C + A +F E P+ ++ S+ +I + Q R KE+ L M G
Sbjct: 660 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 719
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
PD + ++V++ G+LD + E + R+ +K + +I +++ + + + A
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 364 QTFNEMPCKNIF----TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ F+EM + I + L++G G AA KFF EM TP+ +T+ AI++
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---P 476
C G + + K F++M + L P + + + C+AG + +A + M A P
Sbjct: 840 CQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Query: 477 DVLILGALLSA-CKD 490
+V+ L+ CK+
Sbjct: 898 NVVTYTTLIDGLCKE 912
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 159/408 (38%), Gaps = 44/408 (10%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSSF 75
R L ++ ++++ GI+ + +V ++D F K D F + D
Sbjct: 771 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 830
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++IS + A + ++ G PDS TF ++ + + ++H +
Sbjct: 831 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
I+ G C +VV++T++I G + G D A
Sbjct: 891 IQAG--------------------CSP-----------NVVTYTTLIDGLCKEGDLDSAN 919
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+ M ++PN T+ S++ G +SGN+ ++ G LMD Y
Sbjct: 920 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979
Query: 253 VKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
K + +A++I E+ K IV++ +++G ++ L M + GI P+
Sbjct: 980 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
S++ +L +++ + R + D +V + K ++ A F E
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099
Query: 369 MPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
M K ++ T++ L+ G + A + F++M EG ++ F
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 52/386 (13%)
Query: 102 RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCR 161
R G P+SY + +++ + E + +I+ G++ D V +L+ + D R
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 162 SAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLL 214
+A K F EM R DV+++T+II+G+ + G EA +F M +EP++ TF L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 215 VGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK---- 270
G ++G+++ R+H + + ++ L+D K L A ++ HE+ K
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWV 330
+I ++ SI++GL + +E++ L + ++G+ D V T+++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM--------------- 976
Query: 331 HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAM 386
D Y K G +++A + EM K I T+N L+NG +
Sbjct: 977 --------------------DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016
Query: 387 HGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRL 446
HG K M+ +G PN TF +++ C + + M S+ + P
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR--GVGPDG 1074
Query: 447 EHYGCMTDLLCRAGLLDEALMLVRTM 472
+ Y + C+A + EA L + M
Sbjct: 1075 KTYENLVKGHCKARNMKEAWFLFQEM 1100
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 16/326 (4%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIH 230
DV+S+++++ GY R G D+ + M ++PN+ + S++ R L
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQC 286
+ ++ L+D + K + A + F+E+ +DI +++T+IISG Q
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
E+ LF +M G+EPD V T +++ G + VH ++ + ++
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 347 TAMVDMYAKCGCIERALQTFNEM----PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
T ++D K G ++ A + +EM NIFT+N+++NGL G A+K E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G + VT+ ++ A C SG +DK ++ +M+ + L P + + + + C G+L
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGML 1020
Query: 463 DEALMLVRTM---PMAPDVLILGALL 485
++ L+ M +AP+ +L+
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 19/315 (6%)
Query: 190 LFDEAVTMFLSMNVEPNT-ATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
FD V + +P F +LV G LR RR+ + +S+++ N
Sbjct: 603 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGL---LREARRVFEKMLNYGLVLSVDSCNVY 659
Query: 249 MDMYVK-CECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+ K C + A +F E P+ ++ S+ +I + Q R KE+ L M G
Sbjct: 660 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 719
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
PD + ++V++ G+LD + E + R+ +K + +I +++ + + + A
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 364 QTFNEMPCKNIF----TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ F+EM + I + L++G G AA KFF EM TP+ +T+ AI++
Sbjct: 780 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---P 476
C G + + K F++M + L P + + + C+AG + +A + M A P
Sbjct: 840 CQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897
Query: 477 DVLILGALLSA-CKD 490
+V+ L+ CK+
Sbjct: 898 NVVTYTTLIDGLCKE 912
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 159/408 (38%), Gaps = 44/408 (10%)
Query: 18 RCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSSF 75
R L ++ ++++ GI+ + +V ++D F K D F + D
Sbjct: 771 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 830
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
+ ++IS + A + ++ G PDS TF ++ + + ++H +
Sbjct: 831 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAV 195
I+ G C +VV++T++I G + G D A
Sbjct: 891 IQAG--------------------CSP-----------NVVTYTTLIDGLCKEGDLDSAN 919
Query: 196 TMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMY 252
+ M ++PN T+ S++ G +SGN+ ++ G LMD Y
Sbjct: 920 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979
Query: 253 VKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
K + +A++I E+ K IV++ +++G ++ L M + GI P+
Sbjct: 980 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039
Query: 309 VILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNE 368
S++ +L +++ + R + D +V + K ++ A F E
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099
Query: 369 MPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTF 412
M K ++ T++ L+ G + A + F++M EG ++ F
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 182/416 (43%), Gaps = 22/416 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN LI + + + + AIL + G +PD TF +++ + ++I ++
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVRD-----VVSWTSIIAGYARAG 189
+ G N +VH G C + R A EM +D ++ +++ G +AG
Sbjct: 252 EFGCSWSNVSVNVIVH--GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 190 LFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
A+ + L +P+ T+ S++ G + G ++ + + R + N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 247 ALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
L+ K + EA ++ L K D+ ++ S+I GL + + ++ LF +M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G EPD ++ + + G LD + + ++ R + ++D + K A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 363 LQTFNEMP----CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
+ F+EM +N T+N L++GL R A + ++M+ EG P++ T+ ++LT
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM 474
C G + K M S P + YG + LC+AG ++ A L+R++ M
Sbjct: 550 FCRGGDIKKAADIVQAMTSN--GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 177/433 (40%), Gaps = 65/433 (15%)
Query: 58 VDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIV-RNGFLPDSYTFPAML 116
V+FGC W S+ N ++ + R + A+ +++ ++GF PD YTF ++
Sbjct: 251 VEFGCS------W--SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 117 KSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMPVRD 174
+ ++I ++++ G D+Y NS++ G+C + + A +V D+M RD
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS--GLCKLGEVKEAVEVLDQMITRD 360
Query: 175 ----VVSWTSIIAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGR 227
V++ ++I+ + +EA + S + P+ TF SL+ G + N R+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGL 283
+ + + + N L+D L EA + ++ + ++++ ++I G
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ + +E+ +F +M G+ + V +
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNT------------------------------ 510
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEE 399
++D K +E A Q ++M + + +T+N+LL G A +
Sbjct: 511 -----LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
M G P+ VT+ +++ C +G V+ K + + NL+P Y + L R
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRK 623
Query: 460 GLLDEALMLVRTM 472
EA+ L R M
Sbjct: 624 RKTTEAINLFREM 636
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 150/362 (41%), Gaps = 45/362 (12%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ +NS+IS + A+ Q++ P++ T+ ++ + + E ++ +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
+ G++ D+ NSL+ + + R A ++F+EM + D ++ +I G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 191 FDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
DEA+ M M L GC R S+ N L+D
Sbjct: 451 LDEALNMLKQME-----------LSGCAR---------------------SVITYNTLID 478
Query: 251 MYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+ K EA++IF E+ ++ V++ ++I GL + +R +++ L +M G +P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D S+L+ GD+ + + + + DI ++ K G +E A +
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 367 NEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGEG-STPNEVTFLAILTACCH 421
+ K I +N ++ GL + A+ F EM+ + + P+ V++ + C+
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 422 SG 423
G
Sbjct: 659 GG 660
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 27/376 (7%)
Query: 111 TFPAMLKSCAMFLGIGEGMQIHGIVI-KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDE 169
TF +++S A F E + + +I + GL D + N +++L + + +
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 170 MPV----RDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGN 222
M V DV ++ +I RA A+ M M + P+ TF +++ G G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 223 LRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD-----IVSWT 277
L RI + + S + N ++ + K + +A E+ +D ++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR 337
++++GL + K ++ + M G +PD SV+S +G++ + E +D+
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV---KEAVEVLDQ- 355
Query: 338 AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP--------CKNIFTWNALLNGLAMHGR 389
I RD T + C E ++ E+ ++ T+N+L+ GL +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
A++ FEEM +G P+E T+ ++ + C G +D+ QM + + + Y
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM--ELSGCARSVITY 473
Query: 450 GCMTDLLCRAGLLDEA 465
+ D C+A EA
Sbjct: 474 NTLIDGFCKANKTREA 489
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 192/423 (45%), Gaps = 21/423 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN L S+ A + + + + + + NG D YT M+ + + G
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKV-----FDEMPVR-DVVSWTSIIAGYARAGL 190
K+G D ++LV+ G C + R + V EM R D+V+ +++I G G
Sbjct: 133 KLGYEPDTITFSTLVN--GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
EA+ + M +P+ T+ +L +SGN + + + +R K S+ +
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 248 LMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++D K +A +F+E+ K D+V+++S+I GL + + + R+M
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
I PD V ++++ G L + ++ + R I D +++D + K C+ A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
Q F+ M K +I T++ L+N R ++ F E+ +G PN +T+ ++
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVL 479
C SG ++ ++ F +M+S+ + P + YG + D LC G L++AL + M + L
Sbjct: 431 CQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 480 ILG 482
+G
Sbjct: 489 GIG 491
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 173/400 (43%), Gaps = 68/400 (17%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTF-PAMLKSC-----AMFLGIGEGMQ- 130
++LI+ R A++ ++V GF PD T+ P + + C A+ L + M+
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 131 --IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAG 184
I V++ +V D ++ G DD S +F+EM ++ DVV+++S+I G
Sbjct: 239 RNIKASVVQYSIVIDSLCKD------GSFDDALS---LFNEMEMKGIKADVVTYSSLIGG 289
Query: 185 YARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
G +D+ M M N+ P+ TF +L+ + G L + ++ + R
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFR 297
N+L+D + K CL EA Q+F + K DIV+++ +I+ + +R + + LFR
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
++ S G+ P+ + +++ G L+ + + + + R + + ++D G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 358 CIERALQTFNEMP------------------CK---------------------NIFTWN 378
+ +AL+ F +M C ++ T+N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 379 ALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
++ GL G A F +M +G TP++ T+ ++ A
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 18/275 (6%)
Query: 233 IFKRASKVSLEASNALMDMYVKCECL----SEAKQIFHEL----PKKDIVSWTSIISGLV 284
+ RA K+ E V CL SEA + + + D+V+ +++I+GL
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
R E+LVL +M G +PD V VL+ G+ + ++ R IK +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEM 400
+ ++D K G + AL FNEM K ++ T+++L+ GL G+ K EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
+G P+ VTF A++ G + + ++ +N+MI++ ++P Y + D C+
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKEN 364
Query: 461 LLDEALMLVRTMPM---APDVLILGALL-SACKDK 491
L EA + M PD++ L+ S CK K
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 40/242 (16%)
Query: 74 SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG 133
+ +NSLI + + A + +V G PD T+ ++ S + +GM++
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAG 189
+ GL+ + N+LV + +A ++F EM R VV++ ++ G G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 190 LFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
++A+ +F M T +G G + IHG+ ASKV
Sbjct: 470 ELNKALEIFEKMQKSRMT-------LGIGIYNII-----IHGMC--NASKV--------- 506
Query: 250 DMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+A +F L K D+V++ +I GL + E+ +LFRKM G
Sbjct: 507 ---------DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 306 PD 307
PD
Sbjct: 558 PD 559
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 190/413 (46%), Gaps = 21/413 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+SL++ Y S R A+ Q+V G+ PD++TF ++ + E + + ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 137 KMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGL 190
+ G DL ++V+ G+C D A + +M DVV + +II G +
Sbjct: 216 QRGCQPDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
D+A+ +F M+ + P+ T+ SL+ G R+ + +R ++ +A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+D +VK L EA++++ E+ K+ DI +++S+I+G R E+ +F M S
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P+ V ++++ ++ G + + +R + + T ++ + + + A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 364 QTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
F +M NI T+N LL+GL +G+ A+ FE + P+ T+ ++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
C +G V+ G + F + + +SP + Y M CR G +EA L++ M
Sbjct: 514 CKAGKVEDGWELFCNLSLK--GVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 206/479 (43%), Gaps = 65/479 (13%)
Query: 37 IVRNDLV----VKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQI 92
I+RN L V VD FG V F S FN L+S+ A ++ ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFP-----------SIVEFNKLLSAVAKMNKFEL 101
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
I Q+ G D YT+ + + + + ++K+G D+ +SL++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 153 LYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEP 205
Y A + D+M D ++T++I G EAV + M +P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
+ T+ +++ G + G++ + + K+ K +EA
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSL----LKKMEKGKIEA--------------------- 256
Query: 266 HELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL- 324
D+V + +II GL + + ++L LF +M + GI PD +S++S N G
Sbjct: 257 ------DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 325 DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNAL 380
D R + + I+R+ I ++ +A++D + K G + A + ++EM + +IFT+++L
Sbjct: 311 DASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 381 LNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQY 440
+NG MH R A FE M+ + PN VT+ ++ C + V++G + F +M Q
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM--SQR 427
Query: 441 NLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSA-CKDKGILK 495
L Y + +A D A M+ + M + P++L LL CK+ + K
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 198/445 (44%), Gaps = 55/445 (12%)
Query: 97 YRQIVRNGF--------------LPDSYTFPAMLKSCAMFLGI------------GEGMQ 130
YR+++R G + S FP++++ + I GE M+
Sbjct: 651 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 710
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA----GKVFDEMPVRDVVSWTSIIAGYA 186
I +G+ +LY N L++ + C A GK+ D+V+ S++ G+
Sbjct: 711 I------LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 764
Query: 187 RAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+AV + + M +P+T TF +L+ G + + +R + L
Sbjct: 765 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 824
Query: 244 ASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKM 299
A+++ K A + +++ + ++V ++++I L + + ++L LF +M
Sbjct: 825 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 884
Query: 300 HSSGIEPDGVILTSVLSACANVGDL-DYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
+ G+ P+ + +S++S N G D R + + I+R+ I ++ +A++D + K G
Sbjct: 885 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK-INPNLVTFSALIDAFVKKGK 943
Query: 359 IERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
+ +A + + EM + NIFT+++L+NG M R A + E M+ + PN VT+
Sbjct: 944 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 1003
Query: 415 ILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM-- 472
++ C + VDKG + F +M Q L Y + +A D A M+ + M
Sbjct: 1004 LINGFCKAKRVDKGMELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 1061
Query: 473 -PMAPDVLILGALLSA-CKDKGILK 495
+ P++L LL CK+ + K
Sbjct: 1062 VGVHPNILTYNILLDGLCKNGKLAK 1086
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 174/420 (41%), Gaps = 54/420 (12%)
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
++ +F F +LI ++ A+ Q+V+ G PD T+ ++ I +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVC-----DDCRSAGKVFDEMPVR-DVVSWTSIIA 183
+ + K + D+ + N+++ G+C DD + D +R DV +++S+I+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIID--GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 184 GYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
G + +A + M + PN TF +L+ + G L +++ + KR+
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKKD----IVSWTSIISGLVQCQRPKESLVLF 296
+ ++L++ + + L EAK +F + KD +V+++++I G + +R +E + LF
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 297 RKMH-----------------------------------SSGIEPDGVILTSVLSACANV 321
R+M S G+ P+ + +L
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTW 377
G L V EY+ R ++ DI+ M++ K G +E + F + K N+ +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
N +++G G A ++M +G PN T+ ++ A G + + +M S
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 167/373 (44%), Gaps = 19/373 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
NSL++ + +R A+ Q+V G+ PD+ TF ++ + E + + ++
Sbjct: 756 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 815
Query: 137 KMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
+ G DL ++V+ G+C D A + ++M +VV ++++I +
Sbjct: 816 QRGCQPDLVTYGAVVN--GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 873
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
D+A+ +F M V PN T+ SL+ G R+ + +R +L +A
Sbjct: 874 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 933
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+D +VK L +A++++ E+ K+ +I +++S+I+G R E+ + M
Sbjct: 934 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 993
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P+ V ++++ +D G + + +R + + T ++ + + + A
Sbjct: 994 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 1053
Query: 364 QTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
F +M NI T+N LL+GL +G+ A+ FE + P+ T+ ++
Sbjct: 1054 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 1113
Query: 420 CHSGLVDKGRKYF 432
C +G G YF
Sbjct: 1114 CKAGKWKMGGIYF 1126
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 181/434 (41%), Gaps = 56/434 (12%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ +N LI+ + R +A+ ++++ G+ PD T ++L I + + +
Sbjct: 719 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 778
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
+++MG D +L+H + + A + D M R D+V++ +++ G + G
Sbjct: 779 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 838
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
D A+ + M +E N + +
Sbjct: 839 TDLALNLLNKMEAAKIEANVVIY-----------------------------------ST 863
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++D K +A +F E+ K ++++++S+IS L R ++ L M
Sbjct: 864 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 923
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD---MYAKCGCIE 360
I P+ V ++++ A G L ++E + +R+I +I +++++ M + G +
Sbjct: 924 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 983
Query: 361 RALQTFNEMPC-KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ L+ C N+ T+N L+NG R ++ F EM G N VT+ ++
Sbjct: 984 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 1043
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAP 476
+ D + F QM+S + P + Y + D LC+ G L +A+++ + M P
Sbjct: 1044 FQARDCDNAQMVFKQMVS--VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 1101
Query: 477 DVLILGALLSA-CK 489
D+ ++ CK
Sbjct: 1102 DIYTYNIMIEGMCK 1115
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/444 (18%), Positives = 182/444 (40%), Gaps = 45/444 (10%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F ++SLI+ + DR A + ++ P+ T+ ++K + EGM++
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV----RDVVSWTSIIAGYARAGL 190
+ + GLV + +L+H + DC +A VF +M +++++ ++ G + G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+A+ +F + +EP+ T+ ++ G ++G + G + + + ++ A N
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 248 LMDMYVKCECLSEAKQIFHEL----PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++ + + EA + ++ P + ++ ++I ++ + S L ++M S G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 304 IEPDG--VILTSVL----------SACANV---GDLDYGRWVHEYIDRRAIKRDIHIGTA 348
D + L+S +AC N+ ++ E D R + R T
Sbjct: 604 FAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDYREVLR-----TG 658
Query: 349 MVDMYAKCGCIERALQTFNEM----PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
+ D+ ++ A+ F M P +I ++ LL+ +A + + F E+M G
Sbjct: 659 LSDIE-----LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 713
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
+ N T+ ++ C + +M+ Y P + + + C + +
Sbjct: 714 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGY--EPDIVTLNSLLNGFCHGNRISD 771
Query: 465 ALMLVRT---MPMAPDVLILGALL 485
A+ LV M PD + L+
Sbjct: 772 AVALVDQMVEMGYKPDTVTFTTLI 795
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F ++SLI+ + DR A ++R LP+ T+ ++ + +GM++
Sbjct: 964 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 1023
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV----RDVVSWTSIIAGYARAGL 190
+ + GLV + +L+H + DC +A VF +M +++++ ++ G + G
Sbjct: 1024 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 1083
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMG 226
+A+ +F + +EP+ T+ ++ G ++G +MG
Sbjct: 1084 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 1122
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 25/409 (6%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN L S+ A + + ++ + +Q+ G YT M+ + G ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEM------PVRDVVSWTSIIAGYARA 188
K+G D + N+L++ G+C +CR A ++ D M P +++ +++ G
Sbjct: 151 KLGYEPDTVIFNTLLN--GLCLECRVSEALELVDRMVEMGHKPT--LITLNTLVNGLCLN 206
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G +AV + M +PN T+ +L +SG + + + +R K+
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 246 NALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ ++D K L A +F+E+ K DI+++ ++I G R + L R M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
I P+ V + ++ + G L + + + +R I + +++D + K +E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 362 ALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
A+Q + M K +I T+N L+NG R L+ F EM G N VT+ ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
C SG ++ +K F +M+S++ + P + Y + D LC G L++AL
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRR--VRPDIVSYKILLDGLCDNGELEKAL 493
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 167/405 (41%), Gaps = 76/405 (18%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLK------SCAMFLGIGEGMQ 130
N+L++ + + A++ ++V GF P+ T+ +L A+ + + M+
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 131 IHGI---VIKMGLVCDLYVQNSLVHLYGVCDD--CRSAGKVFDEMPVR----DVVSWTSI 181
I +K ++ D G+C D +A +F+EM ++ D++++ ++
Sbjct: 256 ERNIKLDAVKYSIIID-----------GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 182 IAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
I G+ AG +D+ + M + PN TF L+ + G LR ++ + +R
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLV 294
+ N+L+D + K L EA Q+ + K DI+++ +I+G + R + L
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 295 LFRKMH-----------------------------------SSGIEPDGVILTSVLSACA 319
LFR+M S + PD V +L
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 320 NVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC--IERALQTFNEMPCKNI--- 374
+ G+L+ + I++ K ++ IG M+ ++ C ++ A F +P K +
Sbjct: 485 DNGELEKALEIFGKIEKS--KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 375 -FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
+N +++ L A F +M EG P+E+T+ ++ A
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 193/433 (44%), Gaps = 55/433 (12%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCA------MFLGIGEGMQIHGIVIKMGLVCDLYV 146
A+ + ++V++ LP F +L + A + + +GE MQ + + DLY
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ------NLRISYDLYS 117
Query: 147 QNSLVHLYGVCDDCRSA---------GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
N L++ + CR + GK+ D+V+ +S++ GY EAV +
Sbjct: 118 YNILINCF-----CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 198 ---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
M +PNT TF +L+ G + + R + L +++ K
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 255 CECLSEAKQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
+ A + ++ K D+V +T+II L + ++L LF +M + GI P+ V
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 311 LTSVLSACANVGDLDYGRW------VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
S++ N YGRW + + I+R+ I ++ +A++D + K G + A +
Sbjct: 293 YNSLIRCLCN-----YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 365 TFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
++EM + +IFT+++L+NG MH R A FE M+ + PN VT+ ++ C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPD 477
+ V++G + F +M Q L Y + L +AG D A + + M + PD
Sbjct: 407 KAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 478 VLILGALLSA-CK 489
++ LL CK
Sbjct: 465 IITYSILLDGLCK 477
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 173/382 (45%), Gaps = 15/382 (3%)
Query: 69 DWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
+++ ++ FN+LI ++ A+ ++V G PD +T+ ++ I
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAG 184
+ + + K + D+ + +++ + A +F EM + +VV++ S+I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 185 YARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
G + +A + M + PN TF +L+ + G L +++ + KR+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKD----IVSWTSIISGLVQCQRPKESLVLFR 297
+ ++L++ + + L EAK +F + KD +V++ ++I G + +R +E + LFR
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
+M G+ + V +++ GD D + + + + + DI + ++D K G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 358 CIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
+E+AL F + +I+T+N ++ G+ G+ F + +G PN + +
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 414 AILTACCHSGLVDKGRKYFNQM 435
+++ C GL ++ F +M
Sbjct: 540 TMISGFCRKGLKEEADALFREM 561
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 188/437 (43%), Gaps = 59/437 (13%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+SL++ Y R A+ Q+ + P++ TF ++ + E + + ++
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 137 KMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGL 190
G DL+ ++V+ G+C D A + +M DVV +T+II
Sbjct: 213 ARGCQPDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
++A+ +F M+ + PN T+ SL+ G R+ + +R ++ +A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+D +VK L EA++++ E+ K+ DI +++S+I+G R E+ +F M S
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P+ V +++ + K +E +
Sbjct: 391 CFPNVVTYNTLIKG-----------------------------------FCKAKRVEEGM 415
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ F EM + N T+N L+ GL G A K F++MV +G P+ +T+ +L
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM---AP 476
C G ++K F + Q+ + P + Y M + +C+AG +++ L ++ + P
Sbjct: 476 CKYGKLEKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 477 DVLILGALLSACKDKGI 493
+V+I ++S KG+
Sbjct: 534 NVIIYTTMISGFCRKGL 550
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 113/258 (43%), Gaps = 11/258 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F++LI ++ + A Y ++++ PD +T+ +++ M + E + ++I
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
++ N+L+ + ++F EM R + V++ ++I G +AG D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ T+ LL G + G L + + K + + N ++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ K + + +F L K +++ +T++ISG + +E+ LFR+M G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 306 PDGVILTSVLSACANVGD 323
P+ +++ A GD
Sbjct: 568 PNSGTYNTLIRARLRDGD 585
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 210/444 (47%), Gaps = 36/444 (8%)
Query: 77 FNSLISSYAGSDRPQIAI-LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
FN L++ Y + + A+ + R + PD+ T+ +LK+ + + + ++ +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLF 191
K GLV + N+LV+ Y + A ++ + M + D+ ++ +I G AG
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 192 DEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
E + + S+ ++P+ T+ +L+ GC G R++ ++ ++A+
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL----MEQMENDGVKANQVT 382
Query: 249 MDMYVKCECLSEAKQIFHELPKK---------DIVSWTSIISGLVQCQRPKESLVLFRKM 299
++ +K C E ++ K+ DIV++ ++I ++ +L + R+M
Sbjct: 383 HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA-IKRDIHIGTAMVDMYAKCGC 358
GI+ + + L ++L A LD + +R I ++ GT ++ + +
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE-EK 501
Query: 359 IERALQTFNEMP----CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
+E+AL+ ++EM + T+N+L+ GL HG+ A++ F+E+ G P++ TF +
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 415 ILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGC--MTDLLCRAGLLDEALMLVRTM 472
I+ C G V+K +++N+ I + + ++Y C + + LC+ G+ ++AL T+
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSF----KPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 473 --PMAPDVLILGALLSA-CKDKGI 493
D + ++SA CKDK +
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKL 641
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 29/316 (9%)
Query: 44 VKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRN 103
VK +VD G S D V +++LI +Y A+ R++ +
Sbjct: 403 VKELVDMHGFSPDIV-----------------TYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
G ++ T +L + + E + K G + D +L+ + + A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 164 GKVFDEMP----VRDVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVG 216
+++DEM V ++ S+I G G + A+ F + + P+ +TF S+++G
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK---DI 273
+ G + + K + K N L++ K +A F+ L ++ D
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT 625
Query: 274 VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
V++ ++IS + ++ KE+ L +M G+EPD S +S G L + +
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Query: 334 IDRR--AIKRDIHIGT 347
+ ++KRD+ + T
Sbjct: 686 FSGKFGSMKRDLQVET 701
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 193/497 (38%), Gaps = 104/497 (20%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G LK +R S +N LI ++ +DR A L +R++ D +T S
Sbjct: 183 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 242
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSII 182
E + + V E V D V +T +I
Sbjct: 243 GKWREALTL----------------------------------VETENFVPDTVFYTKLI 268
Query: 183 AGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK 239
+G A LF+EA+ M PN T+ +LL GC L +R+ ++
Sbjct: 269 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 328
Query: 240 VSLEASNALMDMY-----------------------------------------VKCECL 258
S + N+L+ Y + C+ L
Sbjct: 329 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 388
Query: 259 SEAKQIFHELPKKDIVSWTSIISGLVQC----QRPKESLVLFRKMHSSGIEPDGVILTSV 314
A++ + E+ +V +S +C + +++ + R+M G PD + V
Sbjct: 389 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 448
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP---- 370
L+ N ++ + E + R + D++ T MVD + K G IE+A + FNEM
Sbjct: 449 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 508
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
N+ T+ AL++ + A + FE M+ EG PN VT+ A++ C +G V+K +
Sbjct: 509 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 568
Query: 431 YFNQMIS-----------QQYNLS---PRLEHYGCMTDLLCRAGLLDEALMLVRTMPM-- 474
F +M +QY+ + P + YG + D C++ ++EA L+ M M
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628
Query: 475 -APDVLILGALLSA-CK 489
P+ ++ AL+ CK
Sbjct: 629 CEPNQIVYDALIDGLCK 645
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 168/388 (43%), Gaps = 69/388 (17%)
Query: 98 RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKM----GLVCDLYVQNSLVHL 153
R+++ GF+PD+ T+ +L +L M++ ++ + GLV D+Y +V
Sbjct: 431 REMIGQGFIPDTSTYSKVLN----YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486
Query: 154 YGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PN 206
+ A K F+EM +VV++T++I Y +A A +F +M E PN
Sbjct: 487 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 546
Query: 207 TATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFH 266
T+ +L+ G ++G + +I F+R S + + +DMY K Q
Sbjct: 547 IVTYSALIDGHCKAGQVEKACQI----FERMCG-SKDVPD--VDMYFK--------QYDD 591
Query: 267 ELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
+ ++V++ +++ G + R +E+ L M G EP+ ++ +++ VG LD
Sbjct: 592 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 651
Query: 327 GRWVH----------------EYIDRR-AIKR------------------DIHIGTAMVD 351
+ V IDR +KR ++ I T M+D
Sbjct: 652 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711
Query: 352 MYAKCGCIERA---LQTFNEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTP 407
K G + A +Q E C+ N+ T+ A+++G M G+ L+ E M +G P
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771
Query: 408 NEVTFLAILTACCHSGLVDKGRKYFNQM 435
N VT+ ++ CC +G +D +M
Sbjct: 772 NYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 189/460 (41%), Gaps = 99/460 (21%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FNSL+ +Y S A +++V+ G +P G ++ I+I
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP--------------------GYVVYNILI 373
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYAR----AGLFD 192
G +C ++SL CD A K + EM VV ++ + R AG ++
Sbjct: 374 --GSICG--DKDSLN-----CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 424
Query: 193 EAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS---- 245
+A ++ M + P+T+T+ +L + + + L+F+ + L A
Sbjct: 425 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA----FLLFEEMKRGGLVADVYTY 480
Query: 246 NALMDMYVKCECLSEAKQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
++D + K + +A++ F+E+ + ++V++T++I ++ ++ + LF M S
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
G P+ V ++++ G ++ + E R +D+ VDMY K
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFE---RMCGSKDV----PDVDMYFK------ 587
Query: 362 ALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
+E P N+ T+ ALL+G R A K + M EG PN++ + A++ C
Sbjct: 588 QYDDNSERP--NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645
Query: 422 SGLVDKGRKYFNQMISQQYN-------------------------LSPRLEH-------- 448
G +D+ ++ +M + LS LE+
Sbjct: 646 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705
Query: 449 YGCMTDLLCRAGLLDEALMLVRTMPM---APDVLILGALL 485
Y M D LC+ G DEA L++ M P+V+ A++
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 200/459 (43%), Gaps = 28/459 (6%)
Query: 33 VTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFP----FNSLISSYAGSD 88
V+ G +R L R+ D K D +D +K FP FN L+S+
Sbjct: 47 VSGGDLRERLSKTRLRDI--KLNDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLK 99
Query: 89 RPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQN 148
+ + I +++ G D YTF ++ + + I G ++K+G D
Sbjct: 100 KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIG 159
Query: 149 SLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFDEAVTMFLSMN-- 202
SLV+ + + A + D+M D+V++ +II + ++A F +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 203 -VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEA 261
+ PN T+ +L+ G S R+ + K+ ++ +AL+D +VK + EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 262 KQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
K++F E+ + DIV+++S+I+GL R E+ +F M S G D V ++++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP----CKN 373
++ G + + +R + + ++ + + G +++A + F++M +
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 374 IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
I+T+N LL GL +G AL FE+M + VT+ ++ C +G V++ F
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ L P + Y M LC GLL E L M
Sbjct: 460 SL--SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+++L+ ++ + + A + ++VR PD T+ +++ + I E Q+ +++
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS----WTSIIAGYARAGLFD 192
G + D+ N+L++ + K+F EM R +VS + ++I G+ +AG D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+A F M+ + P+ T+ LL G +G L I + KR + + ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
K + EA +F L K DIV++T+++SGL E L+ KM G+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 306 PDGVILT 312
+ L+
Sbjct: 503 KNDCTLS 509
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 180/412 (43%), Gaps = 17/412 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N+LIS+Y+ + A + GF P YT+ ++ ++ ++
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVS----WTSIIAGYARAGLFD 192
+ GL D SL+ D KVF +M RDVV ++S+++ + R+G D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
+A+ F S+ + P+ + L+ G R G + + + + ++ + + N ++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 250 DMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
K + L EA ++F+E+ ++ D + T +I G + + ++ LF+KM I
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 306 PDGVILTSVLSACANVGDLDYGRWV-HEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQ 364
D V ++L VGD+D + + + + + + I + +V+ G + A +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY-SILVNALCSKGHLAEAFR 571
Query: 365 TFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
++EM KNI N+++ G G F E+M+ EG P+ +++ ++
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ K +M +Q L P + Y + CR + EA +++R M
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/510 (19%), Positives = 205/510 (40%), Gaps = 65/510 (12%)
Query: 64 FLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFL 123
L+ + VS N+LI S ++A Y++I R+G + YT M+ +
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 124 GIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWT 179
+ + V + G+ D+ N+L+ Y A ++ + MP + V ++
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 180 SIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKR 236
++I G + G ++ A +F M + P++ T+ SLL+ + G++ ++ + R
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 237 ASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK------------------------- 271
L +++M ++ + L +A F+ + +
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 272 --------------DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
D+V++ +I+ GL + + E+ LF +M + PD LT ++
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF-- 375
+G+L + + + + I+ D+ ++D + K G I+ A + + +M K I
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 376 --TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFN 433
+++ L+N L G A + ++EM+ + P + +++ C SG G +
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 434 QMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP-----MAPDVLILGALLSA- 487
+MIS+ + P Y + R + +A LV+ M + PDV ++L
Sbjct: 610 KMISEGF--VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 488 CKDKG-------ILKLPTRYTRPPHRAWDC 510
C+ + K+ R P + C
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+ YV+ L EA + F L K I + ++I LV+ + + +++++ SG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
+ + L +++A G ++ + + + DI ++ Y+ G +E A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 364 QTFNEMPCKN----IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ N MP K ++T+N ++NGL HG+ A + F EM+ G +P+ T+ ++L
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML---VRTMPMAP 476
C G V + K F+ M S+ ++ P L + M L R+G LD+ALM V+ + P
Sbjct: 351 CKKGDVVETEKVFSDMRSR--DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 477 DVLILGALLSACKDKGILKL 496
D +I L+ KG++ +
Sbjct: 409 DNVIYTILIQGYCRKGMISV 428
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 179/434 (41%), Gaps = 48/434 (11%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGF--LKQCDWRVSSFPFNSLISS 83
K++ A+++ SG+ + + ++ K D V+ F ++ D F+S++S
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 84 YAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
+ S A++ + + G +PD+ + +++ I M + +++ G D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 144 LYVQNSLVHLYGVCDD--CRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTM 197
+ N+++H G+C A K+F+EM R D + T +I G+ + G A+ +
Sbjct: 445 VVTYNTILH--GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 198 FLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
F M + + T+ +LL G G+ G++ + I + + + + + L++
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 255 CECLSEAKQIFHELPKKDIVSW----TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVI 310
L+EA +++ E+ K+I S+I G + + KM S G PD
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD--- 619
Query: 311 LTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP 370
C + L YG +V E +M G +++ + +
Sbjct: 620 -------CISYNTLIYG-FVREE-----------------NMSKAFGLVKKMEEEQGGL- 653
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
++FT+N++L+G + A +M+ G P+ T+ ++ + + +
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 431 YFNQMISQQYNLSP 444
++M+ Q SP
Sbjct: 714 IHDEML--QRGFSP 725
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 116/259 (44%), Gaps = 13/259 (5%)
Query: 97 YRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGV 156
+ ++ PDSYT ++ + M++ + + + D+ N+L+ +G
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 157 CDDCRSAGKVFDEMPVRDV----VSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTAT 209
D +A +++ +M +++ +S++ ++ G EA ++ +S N++P
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 210 FVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP 269
S++ G RSGN G + + N L+ +V+ E +S+A + ++
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 270 KK------DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD 323
++ D+ ++ SI+ G + + KE+ V+ RKM G+ PD T +++ + +
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 324 LDYGRWVHEYIDRRAIKRD 342
L +H+ + +R D
Sbjct: 708 LTEAFRIHDEMLQRGFSPD 726
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 188/427 (44%), Gaps = 21/427 (4%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G + + + S +SL++ Y R A+ Q+V G+ PD+ TF ++ +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMPVR----DVV 176
E + + +++ G +L +V+ G+C D A + ++M +VV
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
++++I + D+A+ +F M V PN T+ SL+ R+ +
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRP 289
+R ++ NAL+D +VK L EA++++ E+ K+ DI +++S+I+G R
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
E+ +F M S P+ V ++++ +D G + + +R + + T +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 350 VDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS 405
+ + + + A F +M NI T+N LL+GL +G+ A+ FE +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 406 TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
P T+ ++ C +G V+ G F + + + P + Y M CR GL +EA
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK--GVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 466 LMLVRTM 472
L R M
Sbjct: 560 DALFRKM 566
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 200/450 (44%), Gaps = 65/450 (14%)
Query: 97 YRQIVRNGF--------------------LPDSYTFPAMLKSCA------MFLGIGEGMQ 130
YR+I+RNG LP + F +L + A + + +GE MQ
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA---------GKVFDEMPVRDVVSWTSI 181
++G+ +LY N L++ + CR + GK+ +V+ +S+
Sbjct: 113 ------RLGISHNLYTYNILINCF-----CRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 182 IAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
+ GY +AV + + M P+T TF +L+ G + + +R
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLV 294
+ +L +++ K + A + +++ + ++V ++++I L + + ++L
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDL-DYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
LF +M + G+ P+ + +S++S N D R + + I+R+ I ++ A++D +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAF 340
Query: 354 AKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
K G + A + ++EM + +IFT+++L+NG MH R A FE M+ + PN
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 410 VTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
VT+ ++ C + +D+G + F +M Q L Y + +A D A M+
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 470 RTM---PMAPDVLILGALLSA-CKDKGILK 495
+ M + P+++ LL CK+ + K
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 192/436 (44%), Gaps = 21/436 (4%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S F FN L+S+ A + + I ++ R G + YT+ ++ I + +
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD---EMPVR-DVVSWTSIIAGYARA 188
G ++K+G + +SL++ Y A + D EM R D +++T++I G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
EAV + M +PN T+ ++ G + G++ + + + + ++
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 246 NALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ ++D K +A +F E+ K ++++++S+IS L +R ++ L M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
I P+ V +++ A G L +++ + +R+I DI +++++ + ++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 362 ALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
A F M K N+ T+N L+NG R ++ F EM G N VT+ ++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PM 474
+ D + F QM+S + P + Y + D LC+ G L++A+++ + M
Sbjct: 444 GFFQARDCDNAQMVFKQMVSD--GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 475 APDVLILGALLSA-CK 489
P + ++ CK
Sbjct: 502 EPTIYTYNIMIEGMCK 517
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
+VV++ ++I + + G EA ++ M +++P+ T+ SL+ G L + +
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQC 286
L+ + ++ N L++ + K + + E ++F E+ ++ + V++T++I G Q
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
+ + ++F++M S G+ P+ + ++L G L+ V EY+ R ++ I+
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
M++ K G +E F + K ++ +N +++G G A F +M
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 403 EGSTPNEVT 411
+G P+ T
Sbjct: 569 DGPLPDSGT 577
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 185/436 (42%), Gaps = 59/436 (13%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+SL++ Y S R A+ Q+ G+ P++ TF ++ + E M + ++
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 137 KMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMPVRD----VVSWTSIIAGYARAGL 190
G DL +V+ G+C D A + ++M V+ + +II G +
Sbjct: 214 AKGCQPDLVTYGVVVN--GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
D+A+ +F M + PN T+ SL+ G R+ + +R + +A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 248 LMDMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+D +VK L EA++++ E+ K+ I V+++S+I+G R E+ +F M S
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
PD V +++ + K +E +
Sbjct: 392 CFPDVVTYNTLIKG-----------------------------------FCKYKRVEEGM 416
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ F EM + N T+N L+ GL G A + F+EMV +G PN +T+ +L
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM---AP 476
C +G ++K F + Q+ + P + Y M + +C+AG +++ L + + P
Sbjct: 477 CKNGKLEKAMVVFEYL--QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 477 DVLILGALLSACKDKG 492
DV+ ++S KG
Sbjct: 535 DVVAYNTMISGFCRKG 550
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 200/453 (44%), Gaps = 83/453 (18%)
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCA------MFLGIGEGMQIHGIVIKMGLVCDLYV 146
A+ + ++V++ P F +L + A + + +GE MQ +G+ + Y
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ------NLGIPHNHYT 118
Query: 147 QNSLVHLYGVCDDCRSA---------GKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTM 197
+ L++ + CR + GK+ ++V+ +S++ GY + EAV +
Sbjct: 119 YSILINCF-----CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 198 FLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVK 254
M V +PNT TF +L IHGL + ++ AL+D V
Sbjct: 174 VDQMFVTGYQPNTVTFNTL---------------IHGLFLHNKASEAM----ALIDRMVA 214
Query: 255 CECL----------------SEAKQIFHELPKKD-------IVSWTSIISGLVQCQRPKE 291
C + F+ L K + ++ + +II GL + + +
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDL-DYGRWVHEYIDRRAIKRDIHIGTAMV 350
+L LF++M + GI P+ V +S++S N G D R + + I+R+ I D+ +A++
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALI 333
Query: 351 DMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
D + K G + A + ++EM ++I T+++L+NG MH R A + FE MV +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
P+ VT+ ++ C V++G + F +M Q L Y + L +AG D A
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 467 MLVRTM---PMAPDVLILGALLSA-CKDKGILK 495
+ + M + P+++ LL CK+ + K
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 175/417 (41%), Gaps = 23/417 (5%)
Query: 26 KKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYA 85
K LVT G+V N L + D ++ ++Q +N++I
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK-------MEQGKLEPGVLIYNTIIDGLC 267
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
A+ ++++ G P+ T+ +++ + + ++ +I+ + D++
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDV----VSWTSIIAGYARAGLFDEAVTMF--- 198
++L+ + A K++DEM R + V+++S+I G+ DEA MF
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 199 LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECL 258
+S + P+ T+ +L+ G + + G + + +R + N L+ +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 259 SEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
A++IF E+ +I+++ +++ GL + + ++++V+F + S +EP +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP---- 370
+ G ++ G + + + +K D+ M+ + + G E A F EM
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 371 CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
N +N L+ G A+ + +EM G + T + ++T H G +DK
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDK 623
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 170/384 (44%), Gaps = 19/384 (4%)
Query: 98 RQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVC 157
++ +G PD+YT+ ++ C E Q+ + G D N+L+ +YG
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 158 DDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATF 210
+ A KV +EM + +V++ S+I+ YAR G+ DEA+ + M +P+ T+
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 211 VSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP- 269
+LL G R+G + I + K ++ NA + MY +E +IF E+
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 270 ---KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
DIV+W ++++ Q E +F++M +G P+ +++SA + G +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 327 GRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP---CK-NIFTWNALLN 382
V+ + + D+ ++ A+ G E++ + EM CK N T+ +LL+
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 383 GLAMHGRGYAALKFFEEMVGEGS-TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
A +G+ + E V G P V ++ C L+ + + F+++ ++
Sbjct: 568 AYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL--KERG 624
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEA 465
SP + M + R ++ +A
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKA 648
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 158/337 (46%), Gaps = 21/337 (6%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIH 230
DV S+TS+I+ +A +G + EAV +F M + P T+ +L G+ G +I
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT--PWNKIT 264
Query: 231 GLIFK-RASKVSLEAS--NALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGL 283
L+ K ++ ++ +A N L+ + EA Q+F E+ D V++ +++
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ RPKE++ + +M +G P V S++SA A G LD + + + K D+
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEM---PCK-NIFTWNALLNGLAMHGRGYAALKFFEE 399
T ++ + + G +E A+ F EM CK NI T+NA + G+ +K F+E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 400 MVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRA 459
+ G +P+ VT+ +L +G+ + F +M ++ P E + + R
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM--KRAGFVPERETFNTLISAYSRC 502
Query: 460 GLLDEALMLVRTM---PMAPDVLILGALLSACKDKGI 493
G ++A+ + R M + PD+ +L+A G+
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 198/447 (44%), Gaps = 32/447 (7%)
Query: 65 LKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG 124
+K + +N+L+ Y S RP+ A+ ++V NGF P T+ +++ + A
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTS 180
+ E M++ + + G D++ +L+ + SA +F+EM ++ ++ +
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 181 IIAGYARAGLFDEAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLI--FK 235
I Y G F E + +F +NV P+ T+ +LL G++G M + G+ K
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG---MDSEVSGVFKEMK 481
Query: 236 RASKV-SLEASNALMDMYVKCECLSEAKQIFHEL----PKKDIVSWTSIISGLVQCQRPK 290
RA V E N L+ Y +C +A ++ + D+ ++ ++++ L + +
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 291 ESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMV 350
+S + +M +P+ + S+L A AN ++ + E + I+ + +V
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 351 DMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALK---FFEEMVGE 403
+ +KC + A + F+E+ + +I T N++ ++++GR K + M
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSM---VSIYGRRQMVAKANGVLDYMKER 658
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G TP+ T+ +++ S K + +++++ + P + Y + CR +
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAK--GIKPDIISYNTVIYAYCRNTRMR 716
Query: 464 EALML---VRTMPMAPDVLILGALLSA 487
+A + +R + PDV+ + +
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 72/429 (16%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F + +L+S + + + + A+ + ++ G P+ TF A +K E M+I
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM------PVRDVVSWTSIIAGYARA 188
+ GL D+ N+L+ ++G VF EM P R+ ++ ++I+ Y+R
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRC 502
Query: 189 GLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRI---------------- 229
G F++A+T++ L V P+ +T+ ++L R G ++
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 230 ----H--------GLIFKRASKVS---LEASNALMDMYV----KCECLSEAKQIFHELPK 270
H GL+ A +V +E L+ V KC+ L EA++ F EL +
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 271 K----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDY 326
+ DI + S++S + Q ++ + M G P S++ + D
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 327 GRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP----CKNIFTWNALLN 382
+ I + IK DI ++ Y + + A + F+EM ++ T+N +
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 383 GLAMHGRGYAALKFFEEMVG-------EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
YAA FEE +G G PN+ T+ +I+ C D+ + + +
Sbjct: 743 S-------YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Query: 436 ISQQYNLSP 444
NL P
Sbjct: 796 ----RNLDP 800
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 160/352 (45%), Gaps = 15/352 (4%)
Query: 99 QIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD 158
++++ GF PD TF ++L + I + + + ++ MG ++ +L+
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 159 DCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFV 211
A ++F++M +VV++ +++ G G + +A + M +EPN TF
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
+L+ + G L + ++ ++ + + + +L++ L EA+Q+F+ + +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 272 ----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG 327
+ V +T++I G + +R ++ + +F +M G+ + + T ++ VG D
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNG 383
+ V + R DI ++D G +E+AL F M + NI T+ ++ G
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+ G+ A F + +G PN +T+ +++ C GL+ + F +M
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 183/417 (43%), Gaps = 21/417 (5%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S F L+S A +R + I + Q+ G P T ++ +
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM------PVRDVVSWTSIIAGYA 186
G ++K+G DL SL++ Y + A +FD++ P +VV++T++I
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP--NVVTYTTLIRCLC 199
Query: 187 RAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ + AV +F M PN T+ +L+ G G + + KR + ++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKM 299
AL+D +VK L EAK++++ + + D+ ++ S+I+GL E+ +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
+G P+ VI T+++ ++ G + + ++ + + T ++ Y G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 360 ERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAI 415
+ A + FN+M + +I T+N LL+GL +G+ AL FE M N VT+ I
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 416 LTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ C G V+ F + S+ + P + Y M CR GL+ EA L + M
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSK--GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 153/348 (43%), Gaps = 48/348 (13%)
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--PNTATFVSLLVGC-GRSGNLRMGR 227
P+ ++ +T +++ A+ +D +++F M + P ++++ C S
Sbjct: 79 PLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRAS 138
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGL 283
G + K + L +L++ Y + +A +F ++ K ++V++T++I L
Sbjct: 139 CFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ + ++ LF +M ++G P+ V ++++ +G W+ + +R I+ ++
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEM----PCKNIFTWNALLNGLAMHG----------- 388
TA++D + K G + A + +N M ++FT+ +L+NGL M+G
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 389 ------------------------RGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGL 424
R +K F EM +G N +T+ ++ C G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 425 VDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
D ++ FNQM S++ P + Y + D LC G +++ALM+ M
Sbjct: 379 PDVAQEVFNQMSSRR--APPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F +LI ++ + A Y +++ PD +T+ +++ M+ + E Q+ ++
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFD 192
+ G + + +L+H + K+F EM V + +++T +I GY G D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M+ P+ T+ LL G +G + I + KR +++ ++
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 250 DMYVKCECLSEAKQIFHEL----PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
K + +A +F L K +++++T++ISG + E+ LF+KM G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 306 PD 307
P+
Sbjct: 501 PN 502
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 190/444 (42%), Gaps = 22/444 (4%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK--SVDFVDFGCGFLKQCD 69
LL I + N + Q+ GI N +++F + + G + +
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 70 WRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
+ S NSL++ + +R A+ Q+V G+ PD+ TF ++ E +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMP----VRDVVSWTSIIA 183
+ ++ G DL ++++ G+C + A + ++M DVV + +II
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVIN--GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 184 GYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
G + D+A +F M ++P+ T+ L+ G R+ + ++
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKK-----DIVSWTSIISGLVQCQRPKESLVL 295
L NAL+D +VK L EA++++ E+ K D+V++ ++I G + +R +E + +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 296 FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
FR+M G+ + V T+++ D D + V + + + DI ++D
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 356 CGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
G +E AL F M + +I T+ ++ L G+ F + +G PN VT
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 412 FLAILTACCHSGLVDKGRKYFNQM 435
+ +++ C GL ++ F +M
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEM 522
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 180/440 (40%), Gaps = 63/440 (14%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S F+ L+S+ A ++ + I Q+ G + YT+ + + + I
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVR----DVVSWTSIIAGYA 186
G ++K+G + NSL L G C R A + D+M D V++T+++ G
Sbjct: 134 GKMMKLGYGPSIVTLNSL--LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 187 RAGLFDEAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ EAV + M V +P+ T+ +++ G + G + + + K +E
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN----LLNKMEKGKIE 247
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
A D+V + +II GL + + ++ LF KM + G
Sbjct: 248 A---------------------------DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEY-----IDRRAIKRDIHIGTAMVDMYAKCGC 358
I+PD ++S N YGRW + + I D+ A++D + K G
Sbjct: 281 IKPDVFTYNPLISCLCN-----YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 359 IERALQTFNEMPCK-----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
+ A + ++EM ++ +N L+ G + R ++ F EM G N VT+
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 414 AILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP 473
++ + D + F QM+S + P + Y + D LC G ++ AL++ M
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSD--GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 474 ---MAPDVLILGALLSA-CK 489
M D++ ++ A CK
Sbjct: 454 KRDMKLDIVTYTTMIEALCK 473
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 10/217 (4%)
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
++Q + +++ LF M S P V + +LSA A + D + E + I +
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMP----CKNIFTWNALLNGLAMHGRGYAALKFFE 398
++ + ++ + + + AL +M +I T N+LLNG R A+ +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 399 EMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCR 458
+MV G P+ VTF ++ + +M+ + P L YG + + LC+
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK--GCQPDLVTYGAVINGLCK 227
Query: 459 AGLLDEALMLVRTMP---MAPDVLILGALLSA-CKDK 491
G D AL L+ M + DV+I ++ CK K
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 206/493 (41%), Gaps = 22/493 (4%)
Query: 12 LLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR 71
L+D + L K+ +Q + G+ + +V +D + KS D + +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 72 VSS--FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGM 129
+S + LI R A Y QI++ G P T+ +++ + G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 130 QIHGIVIKMGLVCDLYVQNSLVHLYG----VCDDCRSAGKVFDEMPVRDVVSWTSIIAGY 185
++ +IKMG D+ + LV + R + K+ + +VV + S+I G+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 186 ARAGLFDEAVTMFLSMNV---EPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSL 242
R FDEA+ +F M + +P+ ATF +++ G L + +FK +
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 243 EASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRK 298
A L+D + K + Q+F + + DI +I L +C R +++ F
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 299 MHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGC 358
+ +EPD V +++ ++ LD + E + + T ++ + K
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 359 IERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLA 414
++ A++ F+ M K N T+ L++ + + K FEEM +G +P+ V++
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 415 ILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM-- 472
I+ C G VD+ F+Q I + L P + Y + C+ G L EA +L M
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAK--LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 473 -PMAPDVLILGAL 484
+ PD L+ AL
Sbjct: 805 NGVKPDDLLQRAL 817
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/546 (21%), Positives = 219/546 (40%), Gaps = 100/546 (18%)
Query: 36 GIVRNDLVVKRVVDFFGKSVDFVDFGCGFLK---QCDWRVSSFPFNSLISSYAGSDRPQI 92
GIV + V+K G SVD ++ L C + F +LI+ +
Sbjct: 251 GIVSCNKVLK------GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A ++ + + G PD + ++ +G G ++ + G+ D+ V +S +
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 153 LYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEP 205
+Y D +A V+ M + +VV++T +I G + G EA M+ L +EP
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 206 NTATFVSLLVGCGRSGNLR------------------------------MGRRIHGLIFK 235
+ T+ SL+ G + GNLR G +H + F
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 236 -----RASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQC 286
++ ++++ N+L+D + + EA ++F + K D+ ++T+++ +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
R +E+L LF +M G+EPD + +++ A G + + + R I DI +
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 347 TAMVDMYAKCGCIERA---------------LQTFNEMPC-------------------- 371
++ + KC IE A + T+N M C
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 372 ----KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDK 427
N T L++ L + A++ F M +GS PN VT+ ++ S ++
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 428 GRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT---MPMAPDVLILGAL 484
K F +M Q+ +SP + Y + D LC+ G +DEA + + PDV+ L
Sbjct: 725 SFKLFEEM--QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 485 LSA-CK 489
+ CK
Sbjct: 783 IRGYCK 788
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 136/308 (44%), Gaps = 16/308 (5%)
Query: 170 MPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTAT---FVSLLVGCGRSGNLRMG 226
+P V + + G R L + +EP+ + FV + C G +
Sbjct: 179 IPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC--KGEVTKA 236
Query: 227 RRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL----PKKDIVSWTSIISG 282
H L+ +R +V + + N ++ + + + A ++ + P ++V++ ++I+G
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 283 LVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRD 342
+ + LF+ M GIEPD + ++++ G L G + + +K D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFE 398
+ + ++ +D+Y K G + A + M C+ N+ T+ L+ GL GR Y A +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 399 EMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCR 458
+++ G P+ VT+ +++ C G + G + MI Y P + YG + D L +
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY--PPDVVIYGVLVDGLSK 473
Query: 459 AGLLDEAL 466
GL+ A+
Sbjct: 474 QGLMLHAM 481
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 189/435 (43%), Gaps = 33/435 (7%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N I S+ + +A + +I NG PD T+ +M+ + E +++ +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEM-----------PVRDVVSWTSIIAGY 185
K V Y N+++ YG SAGK FDE + V+++ I+
Sbjct: 301 KNRRVPCTYAYNTMIMGYG------SAGK-FDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 186 ARAGLFDEAVTMFLSM--NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
+ G DEA+ +F M + PN +T+ L+ R+G L + + K ++
Sbjct: 354 RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKM 299
N ++D K + L EA +F E+ K D +++ S+I GL + R ++ ++ KM
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Query: 300 HSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCI 359
S + ++ TS++ N G + G +++ + + D+ + +D K G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 360 ERALQTFNEMPCKNIF----TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAI 415
E+ F E+ + +++ L++GL G + F M +G + + +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 416 LTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML---VRTM 472
+ C G V+K + +M ++ + P + YG + D L + LDEA ML ++
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGF--EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 473 PMAPDVLILGALLSA 487
+ +V+I +L+
Sbjct: 652 RIELNVVIYSSLIDG 666
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 189/466 (40%), Gaps = 77/466 (16%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+L+D + R L + ++ + +G+ N V +VD KS +D C ++ D+
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK-LDEACAMFEEMDY 440
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
+V + PD TF C++ G+G
Sbjct: 441 KVCT--------------------------------PDEITF------CSLIDGLG---- 458
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGL 190
K+G V D Y V+ + DCR+ + + +TS+I + G
Sbjct: 459 ------KVGRVDDAYK----VYEKMLDSDCRT-----------NSIVYTSLIKNFFNHGR 497
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
++ ++ M N P+ + + ++G GR + I R + +
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+ +K +E ++F+ + ++ D ++ +I G +C + ++ L +M + G
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
EP V SV+ A + LD + E + I+ ++ I ++++D + K G I+ A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
E+ K N++TWN+LL+ L AL F+ M TPN+VT+ ++
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
C +K ++ +M Q+ + P Y M L +AG + EA
Sbjct: 738 CKVRKFNKAFVFWQEM--QKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 20/313 (6%)
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
S+ S++ AR FD + M+V P+ T + +++GC ++ LR G + ++
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK----KDIVSWTSIISGLVQCQRP 289
K + + A L+ + +F ++ + + +T++I G + R
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTA 348
+L L +M SS ++ D V+ + + VG +D ++ HE I+ +K D T+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTS 278
Query: 349 MVDMYAKCGCIERALQTFNEM------PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
M+ + K ++ A++ F + PC + +N ++ G G+ A E
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPC--TYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
+GS P+ + + ILT G VD+ K F +M + + +P L Y + D+LCRAG L
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 463 DEALMLVRTMPMA 475
D A L +M A
Sbjct: 394 DTAFELRDSMQKA 406
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 141/334 (42%), Gaps = 42/334 (12%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
N+ + + P+ + +I F+PD+ ++ ++ E ++ +
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
+ G V D N ++ + C A ++ +EM + VV++ S+I G A+ D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 193 EAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EA +F S +E N + SL+ G G+ G + I + ++ +L N+L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 250 DMYVKCECLSEAKQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
D VK E ++EA F + + + V++ +I+GL + ++ ++ V +++M G++
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
P + T+++S A G+ I A+ D + G +
Sbjct: 760 PSTISYTTMISGLAKAGN-------------------IAEAGALFDRFKANGGVP----- 795
Query: 366 FNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEE 399
+ C +NA++ GL+ R A FEE
Sbjct: 796 --DSAC-----YNAMIEGLSNGNRAMDAFSLFEE 822
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 139/348 (39%), Gaps = 16/348 (4%)
Query: 104 GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA 163
GF P T M+ C + EG + ++ K +L+ + +
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 164 GKVFDEMPV----RDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLV---G 216
+F +M V +T++I G+A+ G D A+++ M A V V
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIV-- 274
G+ G + M + I K +++ + K L EA ++F L K V
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 275 --SWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
++ ++I G + E+ L + + G P + +L+ +G +D V E
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIF----TWNALLNGLAMHG 388
+ + A ++ ++DM + G ++ A + + M +F T N +++ L
Sbjct: 368 EMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 389 RGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMI 436
+ A FEEM + TP+E+TF +++ G VD K + +M+
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 58/445 (13%)
Query: 64 FLKQCDWRVS---SFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA 120
F+ + RV+ F ++L+ +Y AI C+R L + F ++ C
Sbjct: 157 FISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFR-------LSRKHRFDVPIRGCG 209
Query: 121 MFLGIGEGMQIHGIV-------IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR 173
L + G + + G ++YV N L++ + + A KVFDE+ R
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
+++P +F +L+ G + GNL G R+ +
Sbjct: 270 ----------------------------SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESL 293
K ++ + +AL++ K + A +F E+ K+ ++ I + L+ +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 294 VL----FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
L ++KM S G++PD V+ ++++ GDL R + + + RR ++ D T +
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 350 VDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGEGS 405
+D + + G +E AL+ EM I ++AL+ G+ GR A + EM+ G
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 406 TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
P++VT+ ++ A C G G K +M S + P + Y + + LC+ G + A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH--VPSVVTYNVLLNGLCKLGQMKNA 539
Query: 466 LMLVRTM---PMAPDVLILGALLSA 487
ML+ M + PD + LL
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEG 564
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 7/227 (3%)
Query: 272 DIVSWTSIISGLVQCQRP--KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
++ S+ + CQR K+++ L K G PD + +CAN+ L++ +
Sbjct: 202 EVAPPPSVEEVMRLCQRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKK 257
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGR 389
VH++ + + D + ++ M+ +C I A + F+ M K++ +W+ ++ + +G
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHY 449
G AL FEEM G PNE TFL + AC G +++ +F+ M ++ +SP+ EHY
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSM-KNEHGISPKTEHY 376
Query: 450 GCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ +L + G L EA +R +P P A+ + + G + L
Sbjct: 377 LGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDL 423
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 91 QIAILCYRQIVRN-------GFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
++ LC R++ ++ G +PD F + +SCA + ++H ++ D
Sbjct: 211 EVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD 270
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN- 202
+ N ++ ++G C A +VFD M +D+ SW ++ Y+ G+ D+A+ +F M
Sbjct: 271 PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK 330
Query: 203 --VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL--MDMYVKCECL 258
++PN TF+++ + C G + +H K +S + + L + + KC L
Sbjct: 331 HGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHL 389
Query: 259 SEAKQIFHELP 269
EA+Q +LP
Sbjct: 390 VEAEQYIRDLP 400
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 190 LFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
L+ +A+ + L P+ FV L C +L +++H + + + +N ++
Sbjct: 220 LYKDAIEL-LDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 250 DMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
M+ +C +++AK++F + KD+ SW ++ ++L LF +M G++P+
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEE 338
Query: 310 ILTSVLSACANVGDLDYGRWVH--EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN 367
+V ACA VG ++ ++H + I ++ + KCG + A Q
Sbjct: 339 TFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 368 EMPCKNIFT-WNALLNGLAMHG 388
++P + W A+ N +HG
Sbjct: 398 DLPFEPTADFWEAMRNYARLHG 419
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 196/456 (42%), Gaps = 81/456 (17%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ F++LIS+Y S + AI + + G P+ T+ A++ +C G G GM+
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC----GKG-GMEF--- 320
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
+ K FDEM D +++ S++A +R GL
Sbjct: 321 --------------------------KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
++ A +F M +E + ++ +LL + G + + I + + ++ + +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 248 LMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++D + K EA +F E+ D VS+ +++S + R +E+L + R+M S G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
I+ D V ++L G D + V + R + ++ + ++D Y+K G + A+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 364 QTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
+ F E ++ ++AL++ L +G +A+ +EM EG +PN VT+ +I+ A
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 420 CHSGLVDKGRKY---------------------------FNQMISQQYNLSPRLEHYGCM 452
S +D+ Y F Q+ ++ N + + G M
Sbjct: 595 GRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG-M 653
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSAC 488
+L C + E + + + P+V+ A+L+AC
Sbjct: 654 QELSC----ILEVFRKMHQLEIKPNVVTFSAILNAC 685
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 162/393 (41%), Gaps = 56/393 (14%)
Query: 114 AMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR 173
AM+ + + + +I G +Y ++L+ YG A VF+ M
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 174 ----DVVSWTSIIAGYARAGL-FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRM 225
++V++ ++I + G+ F + F M V+P+ TF SLL C R G
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 226 GRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIIS 281
R + + R + + + N L+D K + A +I ++P K ++VS++++I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 282 GLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKR 341
G + R E+L LF +M GI D V ++LS
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS------------------------- 452
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFF 397
+Y K G E AL EM K++ T+NALL G G+ K F
Sbjct: 453 ----------IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
EM E PN +T+ ++ GL + + F + S L + Y + D LC
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA--GLRADVVLYSALIDALC 560
Query: 458 RAGLLDEALMLVRTMP---MAPDVLILGALLSA 487
+ GL+ A+ L+ M ++P+V+ +++ A
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 152/353 (43%), Gaps = 58/353 (16%)
Query: 189 GLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
G ++ AV N + A+ +++ GR G + + +RI F ++ A +AL
Sbjct: 217 GFYEFAVKRERRKNEQGKLAS--AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSAL 274
Query: 249 MDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRP----KESLVLFRKMH 300
+ Y + EA +F+ + + ++V++ ++I C + K+ F +M
Sbjct: 275 ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA---CGKGGMEFKQVAKFFDEMQ 331
Query: 301 SSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIE 360
+G++PD + S+L+ C+ G + R + + + R I++D+ ++D K G ++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 361 RALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFF------------------- 397
A + +MP K N+ +++ +++G A GR AL F
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 398 ----------------EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYN 441
EM G + VT+ A+L G D+ +K F +M ++ +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM--KREH 509
Query: 442 LSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA---PDVLILGALLSA-CKD 490
+ P L Y + D + GL EA+ + R A DV++ AL+ A CK+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 35/326 (10%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVD----FG-CGFL 65
LLD I + + +I AQ+ I+ N + V+D F K+ F + FG +L
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 66 KQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGI 125
RVS +N+L+S Y R + A+ R++ G D T+ A+L
Sbjct: 439 GIALDRVS---YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 126 GEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV----RDVVSWTSI 181
E ++ + + ++ +L ++L+ Y + A ++F E DVV ++++
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 182 IAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNL-RMGRRIHGLIFKRA 237
I + GL AV++ M E PN T+ S++ GRS + R +G
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG------ 609
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLV--- 294
SL S++ + + E + Q+F +L + T C+ + L
Sbjct: 610 --GSLPFSSSALSALTETEG-NRVIQLFGQLTTESNNRTTK------DCEEGMQELSCIL 660
Query: 295 -LFRKMHSSGIEPDGVILTSVLSACA 319
+FRKMH I+P+ V +++L+AC+
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACS 686
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 187/427 (43%), Gaps = 21/427 (4%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G + + + S NSL++ + +R A+ Q+V G+ PD+ TF ++
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMP----VRDVV 176
E + + ++ G DL ++++ G+C + A + ++M DVV
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVIN--GLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 177 SWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLI 233
++++I + D+A+ +F M+ + P+ T+ SL+ G R+ +
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 234 FKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRP 289
+R ++ N+L+D + K L EA+++F E+ ++ +IV++ S+I+G R
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
E+ +F M S PD V ++++ + G + + RR + + T +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 350 VDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGS 405
+ + + + A F +M NI T+N LL+GL +G+ A+ FE +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 406 TPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEA 465
P+ T+ + C +G V+ G F + + + P + Y M C+ GL +EA
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK--GVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 466 LMLVRTM 472
L M
Sbjct: 540 YTLFIKM 546
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 184/411 (44%), Gaps = 24/411 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ ++I+ P +A+ ++ + D + ++ S + + + + + +
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 137 KMGLVCDLYVQNSLVHL---YGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAG 189
G+ D++ +SL+ YG D A ++ +M R +VV++ S+I +A+ G
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSD---ASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
EA +F M +++PN T+ SL+ G L ++I L+ + + N
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 247 ALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
L++ + K + + + ++F ++ ++ + V++T++I G Q + ++F++M S
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
G+ P+ + ++L G L+ V EY+ + ++ DI+ M + K G +E
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 363 LQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
F + K ++ +N +++G G A F +M +G P+ T+ ++ A
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
G + +M S ++ + YG +TD+L G LD+ + V
Sbjct: 565 HLRDGDKAASAELIKEMRSCRF--AGDASTYGLVTDML-HDGRLDKGFLEV 612
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 197/457 (43%), Gaps = 35/457 (7%)
Query: 42 LVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIV 101
L + VD FG+ V F S F+ L+S+ A + + I ++
Sbjct: 44 LKLDEAVDLFGEMVKSRPFP-----------SIVEFSKLLSAIAKMKKFDLVISFGEKME 92
Query: 102 RNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCR 161
G + YT+ M+ + + I G ++K+G + NSL L G C R
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL--LNGFCHGNR 150
Query: 162 --SAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSMNV---EPNTATFVS 212
A + D+M D V++T+++ G + EAV + M V +P+ T+ +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK- 271
++ G + G + + + K + + + ++D K + +A +F E+ K
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 272 ---DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
D+ +++S+IS L R ++ L M I P+ V S++ A A G L
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGL 384
+ + + +R+I +I ++++ + ++ A Q F M K ++ T+N L+NG
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSP 444
+ ++ F +M G N VT+ ++ + D + F QM+S + P
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD--GVHP 448
Query: 445 RLEHYGCMTDLLCRAGLLDEALML---VRTMPMAPDV 478
+ Y + D LC+ G L++A+++ ++ M PD+
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
+E++ + + + G D + L + C L+ R VHE I D+ A+
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAI 160
Query: 350 VDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
++MY+ C ++ AL+ F EMP N T ++ +G G A+ F EG+ PN
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 410 VTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
F + + C +G V +G F Q + ++Y + P +EHY +T +L +G LDEAL V
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQF-QAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFV 279
Query: 470 RTMPMAPDVLILGALLSACKDKGILKLPTR 499
MPM P V + L++ + G ++L R
Sbjct: 280 ERMPMEPSVDVWETLMNLSRVHGDVELGDR 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
CG+ L R +H I S + A NA+++MY C + +A ++F E+P+ + +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
++ V +E++ LF + G +P+G I V S C GD+ G + + R
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 337 R-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK-NIFTWNALLNGLAMHG 388
I + ++ M A G ++ AL MP + ++ W L+N +HG
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHG 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 7/201 (3%)
Query: 86 GSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLY 145
G+ R + +L Y + G+ D + K C + +H +I + CD+
Sbjct: 98 GNWREAVEVLDYLE--NKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 146 VQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE- 204
+N+++ +Y C A KVF+EMP + + ++ + G +EA+ +F E
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 205 --PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV-SLEASNALMDMYVKCECLSEA 261
PN F + C +G+++ G +++ V S+E +++ M L EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 262 KQIFHELPKKDIVS-WTSIIS 281
+P + V W ++++
Sbjct: 276 LNFVERMPMEPSVDVWETLMN 296
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 184/421 (43%), Gaps = 17/421 (4%)
Query: 67 QCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIG 126
QC S F+ L+S+ + + + I + Q+ G + T +L +
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS 133
Query: 127 EGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSII 182
+ G +IK+G + SL++ + D A +FD+M +VV + +II
Sbjct: 134 LALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 183 AGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASK 239
G ++ D A+ + M + P+ T+ SL+ G SG R+ + KR
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 240 VSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVL 295
+ NAL+D VK +SEA++ + E+ ++ DIV+++ +I GL R E+ +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 296 FRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAK 355
F M S G PD V + +++ +++G + + +R + R+ T ++ Y +
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 356 CGCIERALQTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
G + A + F M NI T+N LL+GL +G+ AL +M G + VT
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 412 FLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRT 471
+ I+ C +G V + + Q L P + Y M L + GL EA L R
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQ--GLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 472 M 472
M
Sbjct: 492 M 492
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 11/244 (4%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F FN+LI + R A Y +++R PD T+ ++ M+ + E ++ G
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGL 190
++ G D+ + L++ Y K+F EM VR+ V++T +I GY RAG
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
+ A +F M V PN T+ LL G +G + I + K + N
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
++ K +++A I+ L + DI ++T+++ GL + +E+ LFRKM G
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Query: 304 IEPD 307
I P+
Sbjct: 497 ILPN 500
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 291 ESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMV 350
+SL LF M P + +LSA + + D ++ E + I ++ ++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 351 DMYAKCGCIERALQTFNEM----PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGST 406
+ + +C + AL +M +I T+ +LLNG R Y AL F++MVG G
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 407 PNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
PN V + I+ C S VD N+M ++ + P + Y + LC +G +A
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRM--EKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 467 MLVRTM---PMAPDVLILGALLSACKDKG 492
+V M + PDV AL+ AC +G
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEG 270
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 148/365 (40%), Gaps = 74/365 (20%)
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--PNTATFVSLLVGC-GRSGNLRMGR 227
P+ + ++ +++ ++ +D + ++ M + P+ ++L+ C R L +
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGL 283
G + K + S+ +L++ + + + + +A +F ++ K ++V + +II GL
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDI 343
+ ++ +L L +M GI PD V S++S G GRW
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS-----GLCSSGRWSD------------ 239
Query: 344 HIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGE 403
T MV K R + ++FT+NAL++ GR A +F+EEM+
Sbjct: 240 --ATRMVSCMTK-----REIYP-------DVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ--------------QYNLSPRLEH- 448
P+ VT+ ++ C +D+ + F M+S+ Y S ++EH
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 449 ------------------YGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSA 487
Y + CRAG L+ A + R M + P+++ LL
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 488 CKDKG 492
D G
Sbjct: 406 LCDNG 410
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 185/422 (43%), Gaps = 23/422 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQ-IVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIV 135
F+ LI Y S R +L ++ I + LP+ T A+L F G M++ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLF 191
+ +G+ D+Y+ ++ D A ++ M ++V + +I G +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 192 DEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
EAV + +++P+ T+ +L+ G + +G + + S A ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 249 MDMYVK----CECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
++ K E L+ K++ ++ + ++I L + ++ E+ +LF +M G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 305 EPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P+ V + ++ G LD ++ E +D +K ++ ++++ + K G I A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
EM K + T+ +L+ G G+ AL+ + EM G+G P+ TF +L+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP---MAP 476
+GL+ K FN+M ++N+ P Y M + C G + +A ++ M + P
Sbjct: 518 FRAGLIRDAVKLFNEM--AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 477 DV 478
D
Sbjct: 576 DT 577
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 199/492 (40%), Gaps = 60/492 (12%)
Query: 36 GIVRNDLVVKRVVDFF---GKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQI 92
G+ ND+ ++D F GK + F G + ++S +P+NSLI+ +
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSF-LGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
A +++ P T+ +++ I + ++++ + G+ +Y +L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 153 LYGVCDDCRSAGKVFDEMPVRDV----VSWTSIIAGYARAGLFDEAVTMFLSMN---VEP 205
R A K+F+EM +V V++ +I GY G +A M + P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
+T ++ L+ G +G + + K +++ L+ + + L EA +
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 266 HELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
E+ ++ D+V + +I G ++ + K L ++MH G++PD VI TS++ A +
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 322 GDLD--YGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA------LQTFNEMPCK- 372
GD +G W I+ + ++ TA+++ K G + A +Q + +P +
Sbjct: 696 GDFKEAFGIW-DLMINEGCVPNEVTY-TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 373 --------------------------------NIFTWNALLNGLAMHGRGYAALKFFEEM 400
N T+N L+ G GR A + M
Sbjct: 754 TYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
+G+G +P+ +T+ ++ C V K + +N M + + P Y + C AG
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK--GIRPDRVAYNTLIHGCCVAG 871
Query: 461 LLDEALMLVRTM 472
+ +A L M
Sbjct: 872 EMGKATELRNEM 883
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 159/419 (37%), Gaps = 64/419 (15%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+ SL+ Y + A+ Y ++ G P YTF +L I + +++ +
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFD 192
+ + + N ++ Y D A + EM V D S+ +I G G
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 193 EA---VTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EA V N E N + LL G R G L + + +R + L L+
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 250 DMYVKCECLSEAKQIFHELPKK--------DIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
D +K + +++F L K+ D V +TS+I + KE+ ++ M +
Sbjct: 655 DGSLK----HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 302 SGIEPDGVILTSVLSA-------------CANV---------------------GDLDYG 327
G P+ V T+V++ C+ + G++D
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 328 RWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI--------FTWNA 379
+ V + AI + + TA +M + C + ++ +E+ + I T+
Sbjct: 771 KAVELH---NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 380 LLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQ 438
++N L A++ + M +G P+ V + ++ CC +G + K + N+M+ Q
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 172/388 (44%), Gaps = 15/388 (3%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G + + ++ SF FN+LI +R A+ ++V G PD T+ ++
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 123 LGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSW 178
I + + + + + + + N+++ + A +F EM + +VV++
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 179 TSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFK 235
S+I G + +A + M + PN TF +L+ + G L +++ + K
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 236 RASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD----IVSWTSIISGLVQCQRPKE 291
R+ + ++L++ + + L EAK +F + KD +V++ ++I G + +R E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVD 351
+ LFR+M G+ + V T+++ + D + V + + + DI + ++D
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 352 MYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTP 407
G +E AL F + +I+T+N ++ G+ G+ F + +G P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 408 NEVTFLAILTACCHSGLVDKGRKYFNQM 435
N VT+ +++ C GL ++ F +M
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 182/413 (44%), Gaps = 21/413 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
NSL++ + +R A+ Q+V G+ PDS+TF ++ E + + ++
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 137 KMGLVCDLYVQNSLVHLYGVC-----DDCRSAGKVFDEMPVR-DVVSWTSIIAGYARAGL 190
G DL +V+ G+C D S K ++ + VV + +II
Sbjct: 214 VKGCQPDLVTYGIVVN--GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 191 FDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNA 247
++A+ +F M+ + PN T+ SL+ G R+ + +R ++ +A
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 248 LMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
L+D +VK L EA++++ E+ K+ DI +++S+I+G R E+ +F M S
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERAL 363
P+ V +++ +D G + + +R + + T ++ + + + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 364 QTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC 419
F +M +I T++ LL+GL +G+ AL FE + P+ T+ ++
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 420 CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
C +G V+ G F + + + P + Y M CR GL +EA L R M
Sbjct: 512 CKAGKVEDGWDLFCSLSLK--GVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 196/468 (41%), Gaps = 60/468 (12%)
Query: 40 NDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQ 99
NDL + V+ FG V F S F+ L+S+ A ++ + I Q
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFP-----------SIVEFSKLLSAIAKMNKFDLVISLGEQ 106
Query: 100 IVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLV----HLYG 155
+ G + YT+ ++ + + + ++K+G D+ NSL+ H
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 156 VCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNV---EPNTATFVS 212
+ D G++ + D ++ ++I G R EAV + M V +P+ T+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
++ G + G++ + LS K++ +
Sbjct: 227 VVNGLCKRGDIDLA-------------------------------LSLLKKMEQGKIEPG 255
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDL-DYGRWVH 331
+V + +II L + ++L LF +M + GI P+ V S++ N G D R +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMH 387
+ I+R+ I ++ +A++D + K G + A + ++EM + +IFT+++L+NG MH
Sbjct: 316 DMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
R A FE M+ + PN VT+ ++ C + VD+G + F +M Q L
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTV 432
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKG 492
Y + +A D A ++ + M + PD++ LL + G
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F++LI ++ + A Y ++++ PD +T+ +++ M + E + ++I
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
++ N+L+ + ++F EM R + V++T++I G+ +A D
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ T+ LL G +G + + + + + + N ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ K + + +F L K ++V++T+++SG + +E+ LFR+M G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 306 PDGVILTSVLSACANVGD 323
PD +++ A GD
Sbjct: 569 PDSGTYNTLIRAHLRDGD 586
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 3/210 (1%)
Query: 290 KESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAM 349
K+++ + + + G D L + C + L + VHE+I DI ++
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSI 222
Query: 350 VDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNE 409
++MY+ CG +E AL FN MP +N+ TW ++ A +G+G A+ F EG+ P+
Sbjct: 223 IEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
Query: 410 VTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLV 469
F I AC G +++G +F M ++Y + P +EHY + +L G LDEAL V
Sbjct: 283 EMFKEIFFACGVLGDMNEGLLHFESMY-KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV 341
Query: 470 RTMPMAPDVLILGALLSACKDKGILKLPTR 499
+ M P+V + L++ + G L L R
Sbjct: 342 ES--MEPNVDLWETLMNLSRVHGDLILGDR 369
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
CG + L+ + +H I + A N++++MY C + +A +F+ +P++++ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
+I + + ++++ F + G +PDG + + AC +GD++ G E + +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 337 R-AIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTWNALLNGLAMHG 388
I + ++V M A+ G ++ AL+ F E N+ W L+N +HG
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALR-FVESMEPNVDLWETLMNLSRVHG 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 119 CAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSW 178
C + E +H + + D+ NS++ +Y C A VF+ MP R++ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 179 TSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMG 226
+I +A+ G ++A+ F E P+ F + CG G++ G
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 9/249 (3%)
Query: 252 YVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVIL 311
+V+C +S Q+ + I ++ ++ + + +E+L + + G D L
Sbjct: 60 FVQCRRVSSYAQMVNNHQSVTIETFDALCKQV----KIREALEVIDILEDKGYIVDFPRL 115
Query: 312 TSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPC 371
+ C V L+ R VH+ I D +++MY+ C + AL FNEMP
Sbjct: 116 LGLAKLCGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPK 171
Query: 372 KNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
+N TW ++ LA +G G A+ F + EG+ P++ F A+ AC G +++G +
Sbjct: 172 RNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLH 231
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDK 491
F M + Y + +E Y + ++L G LDEAL V M + P V + L++ C +
Sbjct: 232 FESMY-RDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 492 GILKLPTRY 500
G L+L R+
Sbjct: 291 GYLELGDRF 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 217 CGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSW 276
CG L R +H I + + + + +++MY C +A +F+E+PK++ +W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 277 TSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDR 336
++I L + + ++ +F + G +PD I +V AC ++GD++ G E
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFE---- 233
Query: 337 RAIKRDIHIGTAM------VDMYAKCGCIERALQTFNEMPCK-NIFTWNALLN 382
++ RD + +M ++M A CG ++ AL M + ++ W L+N
Sbjct: 234 -SMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMN 285
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 198/476 (41%), Gaps = 36/476 (7%)
Query: 37 IVRNDLV----VKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQI 92
I+RN L V VD FG V F S FN L+S+ A ++ ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFP-----------SIVEFNKLLSAVAKMNKFEL 101
Query: 93 AILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVH 152
I Q+ G D YT+ + + + + ++K+G D+ +SL++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 153 LYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEP 205
Y A + D+M D ++T++I G EAV + M +P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 206 NTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIF 265
+ T+ +++ G + G++ + + + K ++ N ++D K + A +F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 266 HELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
E+ K ++V++ S+I+ L R ++ L M I P+ V +++ A
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTW 377
G L +HE + +R+I D +++ + ++ A Q F M K NI T+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
N L+NG R ++ F EM G N VT+ I+ +G D + F QM+S
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSA-CK 489
+ + + Y + LC G LD AL++ + + M ++ I ++ CK
Sbjct: 462 NR--VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 173/412 (41%), Gaps = 59/412 (14%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+SL++ Y S R A+ Q+V G+ PD++TF ++ + E + + ++
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 137 KMGLVCDLYVQNSLVHLYGVCD-------------------------------------D 159
+ G DL ++V+ G+C
Sbjct: 216 QRGCQPDLVTYGTVVN--GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 160 CRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVS 212
A +F EM + +VV++ S+I G + +A + +M + PN TF +
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKD 272
L+ + G L ++H + +R+ N L++ + L EAKQ+F + KD
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 273 ----IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
I ++ ++I+G +C+R ++ + LFR+M G+ + V T+++ GD D +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF-----NEMPCKNIFTWNALLNG 383
V + + + DI + ++ G ++ AL F +EM NIF +N ++ G
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL-NIFIYNTMIEG 512
Query: 384 LAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
+ G+ A F + P+ VT+ +++ C L+ + F +M
Sbjct: 513 MCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 10/257 (3%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN+LI ++ + A + ++++ PD+ T+ ++ M + E Q+ ++
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
+ ++ N+L++ + C ++F EM R + V++T+II G+ +AG D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V + T+ LL G G L I + K ++++ N ++
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 250 DMYVKCECLSEAKQIFHELP-KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDG 308
+ K + EA +F L K D+V++ ++ISGL + +E+ LFRKM G P+
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 309 VILTSVLSACANVGDLD 325
+++ AN+ D D
Sbjct: 571 GTYNTLIR--ANLRDCD 585
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 17/409 (4%)
Query: 73 SSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIH 132
S FN L+S+ A + + I ++ R + YT+ ++ I + +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 133 GIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD---EMPVR-DVVSWTSIIAGYARA 188
G ++K+G + +SL++ Y A + D EM R D +++T++I G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
EAV + M +PN T+ ++ G + G+ + + + + +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 246 NALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
N ++D K + +A +F E+ K ++V+++S+IS L R ++ L M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
I P+ V +++ A G +++ + +R+I DI ++V+ + +++
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 362 ALQTFNEMPCKNIF----TWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
A Q F M K+ F T+N L+ G R + F EM G + VT+ ++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
H G D +K F QM+S + P + Y + D LC G L++AL
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKAL 490
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 195/454 (42%), Gaps = 74/454 (16%)
Query: 97 YRQIVRNGF--------------------LPDSYTFPAMLKSCA------MFLGIGEGMQ 130
YR+I+RNG LP F +L + A + + +GE MQ
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 131 IHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSA---------GKVFDEMPVRDVVSWTSI 181
++ +V LY N L++ + CR + GK+ +V+ +S+
Sbjct: 113 ------RLEIVHGLYTYNILINCF-----CRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 182 IAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS 238
+ GY +AV + + M P+T TF +L+ G + + +R
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 239 KVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLV 294
+ +L +++ K A + +++ + D+V + +II L + + ++L
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 295 LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW------VHEYIDRRAIKRDIHIGTA 348
LF++M + GI P+ V +S++S + YGRW + + I+++ I ++ A
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCS-----YGRWSDASQLLSDMIEKK-INPNLVTFNA 335
Query: 349 MVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
++D + K G A + +++M + +IFT+N+L+NG MH R A + FE MV +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
P+ VT+ ++ C S V+ G + F +M L Y + L G D
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 465 ALMLVRTM---PMAPDVLILGALLSACKDKGILK 495
A + + M + PD++ LL + G L+
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 181/423 (42%), Gaps = 50/423 (11%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G + + + S +SL++ Y R A+ Q+V G+ PD+ TF ++ +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 123 LGIGEGMQI---------------HGIVI----KMG----------------LVCDLYVQ 147
E + + +G+V+ K G + D+ +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM-- 201
N+++ A +F EM + +VV+++S+I+ G + +A + M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 202 -NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
+ PN TF +L+ + G +++ + KR+ + N+L++ + + L +
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 261 AKQIFHELPKKD----IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
AKQ+F + KD +V++ ++I G + +R ++ LFR+M G+ D V T+++
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK---- 372
+ GD D + V + + + DI + ++D G +E+AL+ F+ M
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
+I+ + ++ G+ G+ F + +G PN VT+ +++ C L+ +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 433 NQM 435
+M
Sbjct: 564 KKM 566
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN+LI ++ + A Y +++ PD +T+ +++ M + + Q+ ++
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
D+ N+L+ + ++F EM R D V++T++I G G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ T+ LL G +G L + + K K+ + ++
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ K + + +F L K ++V++ ++ISGL + +E+ L +KM G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 306 PDGVILTSVLSACANVGD 323
P+ +++ A GD
Sbjct: 573 PNSGTYNTLIRAHLRDGD 590
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 185/425 (43%), Gaps = 25/425 (5%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F+ L S A + + + + +Q+ G + YT M+ C + G +I
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEM------PVRDVVSWTSIIAGYARA 188
K+G D ++L++ G+C + R A ++ D M P +++ +++ G
Sbjct: 135 KLGYEPDTVTFSTLIN--GLCLEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLN 190
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G +AV + M +PN T+ +L +SG + + + +R K+
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 246 NALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
+ ++D K L A +F+E+ K DI+ +T++I G R + L R M
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
I PD V ++++ G L +H+ + +R I D T+++D + K +++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 362 ALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
A + M K NI T+N L+NG L+ F +M G + VT+ ++
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPD 477
C G ++ ++ F +M+S++ + P + Y + D LC G ++AL + + +
Sbjct: 431 GFCELGKLEVAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 478 VLILG 482
L +G
Sbjct: 489 ELDIG 493
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 176/411 (42%), Gaps = 54/411 (13%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
N+L++ + + A+L ++V GF P+ T+ +LK M++ +
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 137 KMGLVCDLYVQNSLVHLYGVCDD--CRSAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
+ + D V+ S++ + G+C D +A +F+EM ++ D++ +T++I G+ AG
Sbjct: 240 ERKIKLD-AVKYSII-IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 191 FDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA---------- 237
+D+ + M + P+ F +L+ + G LR +H + +R
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 238 ------SKVSLEASNALMDM-------------------YVKCECLSEAKQIFHELPKK- 271
+ L+ +N ++D+ Y K + + ++F ++ +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 272 ---DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGR 328
D V++ ++I G + + + + LF++M S + PD V +L + G+ +
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 329 WVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGL 384
+ E I++ ++ DI I ++ ++ A F +P K ++ T+N ++ GL
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 385 AMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQM 435
G A F +M +G +PN T+ ++ A G K K ++
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 124/289 (42%), Gaps = 11/289 (3%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F++LI + + + A ++++++ G PD+ T+ +++ + + + +++
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
G ++ N L++ Y + ++F +M +R D V++ ++I G+ G +
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ ++ LL G +G I I K ++ + N ++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ +A +F LP K D+ ++ +I GL + E+ +LFRKM G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYA 354
P+G ++ A GD + E I R D +VDM +
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 13/238 (5%)
Query: 259 SEAKQIFHEL----PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSV 314
+A +F E+ P+ ++ ++ + S + + ++ L L ++M GI + L+ +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 315 LSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFN---EMPC 371
++ C L I + + D + +++ G + AL+ + EM
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 372 K-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRK 430
K + T NAL+NGL ++G+ A+ + MV G PNEVT+ +L C SG +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 431 YFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPM---APDVLILGALL 485
+M ++ L Y + D LC+ G LD A L M + D++I L+
Sbjct: 234 LLRKMEERKIKLDAV--KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 180/423 (42%), Gaps = 50/423 (11%)
Query: 63 GFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMF 122
G + + + S +SL++ Y R A+ Q+V G+ PD+ TF ++ +
Sbjct: 68 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 127
Query: 123 LGIGEGMQI---------------HGIVI----KMG----------------LVCDLYVQ 147
E + + +G+V+ K G + D+ +
Sbjct: 128 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 187
Query: 148 NSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM-- 201
N+++ A +F EM + +VV+++S+I+ G + +A + M
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 202 -NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSE 260
+ PN TF +L+ + G ++H + KR+ + N+L++ + + L +
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 261 AKQIFHELPKKD----IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLS 316
AKQ+F + KD + ++ ++I G + +R ++ LFR+M G+ D V T+++
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367
Query: 317 ACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK---- 372
+ GD D + V + + + DI + ++D G +E+AL+ F+ M
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427
Query: 373 NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYF 432
+I+ + ++ G+ G+ F + +G PN VT+ +++ C L+ +
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487
Query: 433 NQM 435
+M
Sbjct: 488 KKM 490
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 155/341 (45%), Gaps = 28/341 (8%)
Query: 175 VVSWTSIIAGYARAGLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
+V+ +S++ GY +AV + + M P+T TF +L+ G +
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQ 287
+ +R + +L +++ K + A + +++ + D+V + +II L + +
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW------VHEYIDRRAIKR 341
++L LF++M + GI P+ V +S++S + YGRW + + I+++ I
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCS-----YGRWSDASQLLSDMIEKK-INP 252
Query: 342 DIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFF 397
++ A++D + K G A + ++M + +IFT+N+L+NG MH R A + F
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 398 EEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLC 457
E MV + P+ T+ ++ C S V+ G + F +M L Y + L
Sbjct: 313 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLF 370
Query: 458 RAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGILK 495
G D A + + M + PD++ LL + G L+
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 411
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
FN+LI ++ + A + +++ PD +T+ +++ M + + Q+ ++
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
DL N+L+ + ++F EM R D V++T++I G G D
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ T+ LL G +G L + + K K+ + ++
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 250 DMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ K + + +F L K ++V++ ++ISGL + +E+ L +KM G
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496
Query: 306 PDGVILTSVLSACANVGD 323
PD +++ A GD
Sbjct: 497 PDSGTYNTLIRAHLRDGD 514
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 153/334 (45%), Gaps = 16/334 (4%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVT---MFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
DV II G+A++G +A+ M + + TAT VS++ SG +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQC 286
+ + K A NAL+ YVK L +A+ + E+ K+ D +++ +I V
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
R + + ++ ++M + ++P+ + + +L+ + G+ V + + +K D
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVG 402
++D + K C++ A+ TF+ M + I TWN L++ HGR A + FE M
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G P T+ ++ + D ++ +M SQ + P + + + D+ ++G
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ--GILPNVVTHTTLVDVYGKSGRF 565
Query: 463 DEA---LMLVRTMPMAPDVLILGALLSACKDKGI 493
++A L ++++ + P + AL++A +G+
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 176/451 (39%), Gaps = 36/451 (7%)
Query: 78 NSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIK 137
N +I +A S P A+ G + T +++ + A E + + +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 138 MGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDE 193
G+ N+L+ Y + A + EM R D +++ +I Y AG ++
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 194 AVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
A + M +V+PN+ F LL G G + ++ + K + N ++D
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 251 MYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
+ K CL A F + + D V+W ++I + R + +F M G P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
++++ + D + + + + I ++ T +VD+Y K G A++
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 367 NEM------PCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACC 420
EM P ++ NAL+N A G A+ F M +G P+ + +++ A
Sbjct: 573 EEMKSVGLKPSSTMY--NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA-- 628
Query: 421 HSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLI 480
+ R+ QY ++ G D++ L+ +AL+ V P V+
Sbjct: 629 ----FGEDRRDAEAFAVLQY-----MKENGVKPDVVTYTTLM-KALIRVDKFQKVP-VVY 677
Query: 481 LGALLSACKD----KGILKLPTRYTRPPHRA 507
++S CK + +L+ RY + RA
Sbjct: 678 EEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 122/298 (40%), Gaps = 15/298 (5%)
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVS---LLVGCGRSGNLR--MGRRIH 230
+++ ++I AR ++A+ + M + + FV+ ++ RS + M R++
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWT----SIISGLVQC 286
I + ++ ++ N ++ + K S+A Q+ + + T SIIS L
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
R E+ LF ++ SGI+P ++L G L + +++R + D H
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 347 TAMVDMYAKCGCIERALQTFNEMPC----KNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
+ ++D Y G E A EM N F ++ LL G G + +EM
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
G P+ + ++ +D F++M+S+ + P + + D C+ G
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE--GIEPDRVTWNTLIDCHCKHG 493
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 118/285 (41%), Gaps = 23/285 (8%)
Query: 65 LKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLG 124
++ D + +SF F+ L++ + Q +++ G PD + ++ + F
Sbjct: 400 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 125 IGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRS--AGKVFDEMPVRD----VVSW 178
+ M ++ G+ D N+L+ + C R A ++F+ M R ++
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCH--CKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 179 TSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFK 235
+I Y +D+ + M + PN T +L+ G+SG R I L +
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG--RFNDAIECL--E 573
Query: 236 RASKVSLEAS----NALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQ 287
V L+ S NAL++ Y + +A F + K +++ S+I+ + +
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
R E+ + + M +G++PD V T+++ A V V+E
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 180/426 (42%), Gaps = 67/426 (15%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N +I+ R + ++ R G+ D T+ ++K + + +H ++
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVV----SWTSIIAGYARAGLFD 192
+ GL + SL+H + A + D+M VR + ++T+++ G+++ G +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
EA + MN P+ T+ +L+ G +G + + + ++ + + + ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 250 DMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ + + EA ++ E+ +K D ++++S+I G + +R KE+ L+ +M G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
PD T++++A GDL E+ALQ
Sbjct: 518 PDEFTYTALINAYCMEGDL-----------------------------------EKALQL 542
Query: 366 FNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTAC-- 419
NEM K ++ T++ L+NGL R A + ++ E S P++VT+ ++ C
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 420 -------------CHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEAL 466
C G++ + + F M+ + N P Y M CRAG + +A
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGK--NHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 467 MLVRTM 472
L + M
Sbjct: 661 TLYKEM 666
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 143/328 (43%), Gaps = 17/328 (5%)
Query: 175 VVSWTSIIAGYARA----GLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
V+S+ +++ R+ + L V PN T+ L+ G +GN+ + +
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQC 286
+ + ++ N L+D Y K + + ++ + K +++S+ +I+GL +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
R KE + +M+ G D V +++ G+ +H + R + +
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 347 TAMVDMYAKCGCIERALQTFNEMP----CKNIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
T+++ K G + RA++ ++M C N T+ L++G + G A + EM
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G +P+ VT+ A++ C +G ++ M ++ LSP + Y + CR+ +
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM--KEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 463 DEALMLVRTM---PMAPDVLILGALLSA 487
DEAL + R M + PD + +L+
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQG 494
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 318 CANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNIFTW 377
C L + VH I D+ +++MY+ CG A F +M KN+ TW
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
++ A +G G A+ F EG+ P+ F I AC G VD+G +F M S
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM-S 382
Query: 438 QQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSACKDKGILKL 496
+ Y ++P +E Y + ++ G LDEAL V MPM P+V + L++ + G L+L
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 184 GYARAGLFDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLE 243
G + L+ + + SMN + + + L CG + L+ + +HG I S + L
Sbjct: 233 GKVKKALY--TIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLS 290
Query: 244 ASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSG 303
+++ L++MY C +EA +F ++ +K++ +W II + ++++ +F + G
Sbjct: 291 SNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEG 350
Query: 304 IEPDGVILTSVLSACANVGDLDYGRWVHEYIDRR-AIKRDIHIGTAMVDMYAKCGCIERA 362
PDG + + AC +GD+D G E + R I I ++V+MYA G ++ A
Sbjct: 351 NIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEA 410
Query: 363 LQTFNEMPCK-NIFTWNALLNGLAMHG 388
L+ MP + N+ W L+N +HG
Sbjct: 411 LEFVERMPMEPNVDVWETLMNLSRVHG 437
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 115 MLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRD 174
+ K C G+ E +HG + DL + L+ +Y C A VF++M ++
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 175 VVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHG 231
+ +W II +A+ G ++A+ MF E P+ F + CG G++ G +H
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHF 378
Query: 232 LIFKRASKV--SLEASNALMDMYVKCECLSEAKQIFHELP-KKDIVSWTSIIS 281
R + S+E +L++MY L EA + +P + ++ W ++++
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 198/485 (40%), Gaps = 46/485 (9%)
Query: 30 AQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDR 89
A LV SG++ N V F + ++ +RV SF +N I R
Sbjct: 17 ANLVKSGMIDN------AVQVFDE-----------MRHSSYRVFSFDYNRFIGVLVRESR 59
Query: 90 PQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNS 149
++A Y + GF +T+ + + + +G + D++ N
Sbjct: 60 FELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNV 119
Query: 150 LVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSM---N 202
+ L + A + F M R DVVS+T +I G RAG +AV ++ +M
Sbjct: 120 YLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Query: 203 VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRAS-KVSLEASNALMDMYVKCECLSEA 261
V P+ +L+VG + + + + K A K+S NAL+ + K + +A
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Query: 262 KQIFHELPK----KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA 317
+ + + K D+V++ +++ K + + +M SGI+ D +L
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 318 CANVGDLD--YGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK--- 372
V D Y V E R D+ + +++ + + +A + F EM K
Sbjct: 300 HCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Query: 373 -NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKY 431
N+ T+ +L+ G A K ++M G +P+ + + IL C SG VDK
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGV 417
Query: 432 FNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVL----ILGAL 484
FN MI ++ ++P Y + LCR+G + EA+ L M PD L I+G L
Sbjct: 418 FNDMI--EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 485 LSACK 489
+ K
Sbjct: 476 IRGKK 480
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 184/413 (44%), Gaps = 30/413 (7%)
Query: 53 KSVDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTF 112
K D +D ++ + + FN + ++ A+ + +V+ G PD ++
Sbjct: 93 KKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY 152
Query: 113 PAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPV 172
++ + + ++I +I+ G+ D +LV G+C R + EM
Sbjct: 153 TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV--VGLCH-ARKVDLAY-EMVA 208
Query: 173 RDV---------VSWTSIIAGYARAGLFD--EAVTMFLS-MNVEPNTATFVSLLVGCGRS 220
++ V + ++I+G+ +AG + EA+ ++S + EP+ T+ LL +
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 221 GNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK-------DI 273
L+ + + + ++ + N L+ + + +S + ++ + K+ D+
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR---VSHPDKCYNFMVKEMEPRGFCDV 325
Query: 274 VSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEY 333
VS++++I + +++ LF +M G+ + V TS++ A G+ + + +
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 334 IDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGR 389
+ + D T ++D K G +++A FN+M I ++N+L++GL GR
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 390 GYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNL 442
A+K FE+M G+ P+E+TF I+ + K ++QM+ + + L
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTL 498
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 192/461 (41%), Gaps = 56/461 (12%)
Query: 31 QLVTSGIVRNDLVVKRVVDFFGKSVD--FVDFGCGFLKQCDWRVSSFPFNSLISSYAGSD 88
QL +GI N + +++ F + F G + + + + FN+LI
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162
Query: 89 RPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQN 148
+ A++ ++V NG PD T+ +++ + + + + + D++ +
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222
Query: 149 SLVHLYGVC-DDCRSAG-KVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMF---L 199
+++ +C D C A +F EM + VV++ S++ G +AG +++ + +
Sbjct: 223 TIID--SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 280
Query: 200 SMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLS 259
S + PN TF LL + G L+ ++ + R ++ N LMD Y LS
Sbjct: 281 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 340
Query: 260 EAKQIFHELPKK----DIVSWTSIISG-------------------------------LV 284
EA + + + DIV++TS+I G LV
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
Query: 285 Q--CQRPKESLV--LFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIK 340
Q CQ K L LF++M S G+ PD + +L + G L+ + E + + +
Sbjct: 401 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 460
Query: 341 RDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKF 396
I + T +++ K G +E A F +PCK N+ T+ +++GL G A
Sbjct: 461 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 520
Query: 397 FEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
+M +G+ PN+ T+ ++ A G + K +M S
Sbjct: 521 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 561
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 202/497 (40%), Gaps = 75/497 (15%)
Query: 22 LKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGK-SVDFVDFGCGFLKQCDWRVSSFPFNSL 80
+K+ + I L+ +G +R DL+ + FF DF G + F
Sbjct: 1 MKALRLIQPHLLKTGSLRTDLLCT-ISSFFSSCERDFSSISNG----------NVCFRER 49
Query: 81 ISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFP------AMLKSCAMFLGIGEGMQIHGI 134
+ S + AI +++++R+ LP F A K + L + ++++GI
Sbjct: 50 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 109
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSA------GKVFDEMPVRDVVSWTSIIAGYARA 188
++Y N +++ + C C++ GKV D ++ ++I G
Sbjct: 110 A------HNIYTLNIMINCFCRC--CKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G EAV + M +P+ T+ S++ G RSG+ +
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA------------------- 202
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+D+ K E K D+ ++++II L + ++ LF++M + GI+
Sbjct: 203 ---LDLLRKME---------ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
V S++ G + G + + + R I ++ ++D++ K G ++ A +
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310
Query: 366 FNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
+ EM + NI T+N L++G M R A + MV +P+ VTF +++ C
Sbjct: 311 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 370
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDV 478
VD G K F + + L Y + C++G + A L + M + PDV
Sbjct: 371 VKRVDDGMKVFRNI--SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 428
Query: 479 LILGALLSACKDKGILK 495
+ G LL D G L+
Sbjct: 429 MTYGILLDGLCDNGKLE 445
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 205/482 (42%), Gaps = 57/482 (11%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVD--FFGKSVDFVDFGCGFLKQC 68
++L +R + ++ ++ GI+ + ++D F ++ VD +K+
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR 267
Query: 69 DWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
+ S +N LI+ ++ + + + A + + R+GF Y+F +++ + G
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG---YCKQGLF 324
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLY--GVCDDCR--SAGKVFDEMPVRDVVSWTSIIAG 184
G+ +M L +Y S ++Y +CD R A ++ M DVVS+ +++ G
Sbjct: 325 DDAWGVTDEM-LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG 383
Query: 185 YARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
Y + G F EA +F + ++ P+ T+ +L+ G SGNL +R+ + +
Sbjct: 384 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKK------------------------------ 271
+ L+ +VK LS A +++ E+ +K
Sbjct: 444 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 272 ----------DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANV 321
D+ + I GL + +++ RK+ G+ PD V T+V+
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 322 GDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTW 377
G R +++ + R+ + + ++ +AK G +E+A Q EM + N+ T
Sbjct: 564 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 378 NALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMIS 437
NALL G+ G A ++ +M EG PN+ ++ +++ C ++ K + +M+
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 438 QQ 439
++
Sbjct: 684 KE 685
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/516 (19%), Positives = 214/516 (41%), Gaps = 61/516 (11%)
Query: 1 MSRIRLNLKWVLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDL------VVKRVVDFFGKS 54
M R++ + + ++I+R +++K ++ A ++ + NDL V +R +D
Sbjct: 94 MIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEI-LAENDLMSEAYLVAERSIDLGMHE 152
Query: 55 VDFVDFGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPA 114
+D + F D ++ + L+ Y + +L + +++R GFLP
Sbjct: 153 IDDLLIDGSF----DKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPS------ 202
Query: 115 MLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRD 174
+++C + L + ++ ++ K V + +++ + MP
Sbjct: 203 -VRNCNIVLKV---LRDSRMMNKASAVYETMIEHGI-------------------MPT-- 237
Query: 175 VVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHG 231
V+++ +++ +AG + ++L M N+E + T+ L+ G ++G + RR HG
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 232 LIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIVSWTSI----ISGLVQCQ 287
+ + V+ + N L++ Y K +A + E+ I TS I L
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 288 RPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGT 347
R ++ R++ SS PD V +++ +G + + + I I
Sbjct: 358 RIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 348 AMVDMYAKCGCIERALQTFNEMPCKNIF----TWNALLNGLAMHGRGYAALKFFEEMVGE 403
++D + G +E A + EM + IF T+ L+ G +G A + ++EM+ +
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 404 GSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLD 463
G P+ + G DK + +M++ ++ +P L Y D LC+ G L
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH-APDLTIYNVRIDGLCKVGNLV 532
Query: 464 EALMLVRTM---PMAPDVLILGALLSACKDKGILKL 496
+A+ R + + PD + ++ + G K+
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 16/246 (6%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHG-IV 135
+ +L+ + + +A Y +++R G PD Y + + ++H +V
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 136 IKMGLVCDLYVQNSLVHLYGVCD------DCRSAGKVFDEMPVRDVVSWTSIIAGYARAG 189
DL + N V + G+C K+F V D V++T++I GY G
Sbjct: 507 ATDHHAPDLTIYN--VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
F A ++ M + P+ T+ L+ G ++G L + + KR + ++ N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 247 ALMDMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQCQRPKESLVLFRKMHSS 302
AL+ K + EA + ++ ++ I S+T +IS ++ +E + L+++M
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 303 GIEPDG 308
IEPDG
Sbjct: 685 EIEPDG 690
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 196/471 (41%), Gaps = 58/471 (12%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLP----------------------------- 107
+ +I+SY S ++I + ++V NGF+P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 108 -----DSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCD--DC 160
D Y+F ++K C I + + + + G ++ + +L+ G C +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLID--GCCKKGEI 214
Query: 161 RSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSL 213
A +F EM V + ++T +I G + G+ + M+ M V PN T+ +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 214 LVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK-- 271
+ + G + ++ + +R ++ N L+ + L+EA ++ ++
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 272 --DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRW 329
+++++ ++I G + ++L L R + S G+ P V ++S GD
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 330 VHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMP----CKNIFTWNALLNGLA 385
+ + ++ R IK T ++D +A+ +E+A+Q M ++ T++ L++G
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 386 MHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPR 445
+ G+ A + F+ MV + PNEV + ++ C G + K +M ++ L+P
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM--EEKELAPN 512
Query: 446 LEHYGCMTDLLCRAGLLDEALMLVRTM---PMAPDVLILGALLSACKDKGI 493
+ Y M ++LC+ EA LV M + P IL + A D +
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHV 563
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 155/337 (45%), Gaps = 18/337 (5%)
Query: 171 PVRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGR 227
P+ +V +T ++ A+ FD + ++ M + + +F L+ R L +
Sbjct: 604 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 663
Query: 228 RIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPK----KDIVSWTSIISGL 283
+ G + K + S+ +L++ + + EA + + ++V + ++I+GL
Sbjct: 664 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 723
Query: 284 VQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGD-LDYGRWVHEYIDRRAIKRD 342
+ + +L +F M GI D V +++S +N G D R + + + +R I +
Sbjct: 724 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV-KRKIDPN 782
Query: 343 IHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFE 398
+ TA++D + K G + A + EM + N+FT+N+L+NG +HG A F+
Sbjct: 783 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 842
Query: 399 EMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCR 458
MV +G P+ VT+ ++T C S V+ G K F +M Q L Y + C+
Sbjct: 843 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ--GLVGDAFTYNTLIHGYCQ 900
Query: 459 AGLLDEALMLVRTM---PMAPDVLILGALLSACKDKG 492
AG L+ A + M ++PD++ LL + G
Sbjct: 901 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 937
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 147/326 (45%), Gaps = 51/326 (15%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
D+ S+T +I + R A+++ + + EP+ TF SLL G + +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQC 286
L+ K + ++ N L+D K L+ A ++ +E+ KK D+V++ ++++GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 287 QRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIG 346
R ++ + R M I PD V T
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFT---------------------------------- 250
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVG 402
A++D++ K G ++ A + + EM ++ T+N+++NGL MHGR Y A K F+ M
Sbjct: 251 -ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
+G PN VT+ +++ C +VD+G K F +M + +N + Y + C+ G L
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD--IFTYNTLIHGYCQVGKL 367
Query: 463 DEALML---VRTMPMAPDVLILGALL 485
AL + + + + PD++ LL
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILL 393
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 167/370 (45%), Gaps = 27/370 (7%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ F LI + R A+ ++++ G+ P TF ++L + IG+ + +
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCD--DCRSAGKVFDEMPVR----DVVSWTSIIAGYARA 188
++K G ++ V N+L+ G+C + A ++ +EM + DVV++ +++ G +
Sbjct: 167 MVKSGYEPNVVVYNTLID--GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 189 GLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G + +A M M ++ P+ TF +L+ + GNL + ++K + S++ +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE----LYKEMIQSSVDPN 280
Query: 246 NALMDMYVKCEC----LSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFR 297
N + + C L +AK+ F + K ++V++ ++ISG + + E + LF+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
+M G D +++ VG L + ++ R + DI ++ G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 358 CIERALQTFNEMPCKN----IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFL 413
IE AL F++M I +N +++GL + A + F + EG P+ T+
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 414 AILTACCHSG 423
++ C +G
Sbjct: 461 IMILGLCKNG 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 188/432 (43%), Gaps = 37/432 (8%)
Query: 80 LISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA------MFLGIGEGMQIHG 133
L + + S R + A + ++V + LP F +L + A + + M+++G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAG 189
I DLY L+H + C A V +M +V++ S++ G+
Sbjct: 102 IS------HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 190 LFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASN 246
+A ++ + M EPN + +L+ G ++G L + + + K+ + N
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 247 ALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSS 302
L+ S+A ++ ++ K+ D+V++T++I V+ E+ L+++M S
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 303 GIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERA 362
++P+ V S+++ G L + + + + ++ ++ + K ++
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 363 LQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTA 418
++ F M C+ +IFT+N L++G G+ AL F MV TP+ +T +L
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 419 CCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA--- 475
C +G ++ F+ M + + + Y M LC+A +++A L +P+
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIG--IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 476 PD-----VLILG 482
PD ++ILG
Sbjct: 454 PDARTYTIMILG 465
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 203/480 (42%), Gaps = 52/480 (10%)
Query: 76 PFNSLISSYAGSDRPQIAILCYRQIVRNGF----LPDSYT-FPAMLKSCAM--------F 122
P SL S++G+ YR+ +RN D+++ F ML+S +
Sbjct: 559 PETSLSRSFSGASHHH----HYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRV 614
Query: 123 LGIGEGMQIHGIVI-------KMGLVCDLYVQNSLVHLYGVCDDCRSA----GKVFDEMP 171
L + M IVI +G+ DLY L+H + C A GK+
Sbjct: 615 LTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 674
Query: 172 VRDVVSWTSIIAGYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRR 228
+V+ S++ G+ + F EAV++ SM+ PN + +++ G ++ +L
Sbjct: 675 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 734
Query: 229 IHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLV 284
+ + K+ + N L+ ++A ++ ++ K+ +++ +T++I V
Sbjct: 735 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 794
Query: 285 QCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIH 344
+ E+ L+++M + P+ S+++ G L +++ + + + D+
Sbjct: 795 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 854
Query: 345 IGTAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEM 400
++ + K +E ++ F EM + + FT+N L++G G+ A K F M
Sbjct: 855 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 914
Query: 401 VGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAG 460
V G +P+ VT+ +L C++G ++K + Q+ + + Y + LCR
Sbjct: 915 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL--QKSEMDVDIITYNIIIQGLCRTD 972
Query: 461 LLDEALMLVRTMP---MAPDVLILGALLSACKDKGILKLPTRYTR--------PPHRAWD 509
L EA L R++ + PD + ++S KG+ + + R P R +D
Sbjct: 973 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1032
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 178/411 (43%), Gaps = 17/411 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F L+++ A R + I +++ G D Y+F ++ + + + G ++
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFD 192
K+G + SL+H + + + A + M +VV + ++I G + G +
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 193 EAVTMFLSMNVE---PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A+ + M + + T+ +LL G SG R+ + KR+ + AL+
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 250 DMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
D++VK L EA++++ E+ + + V++ SII+GL R ++ F M S G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 306 PDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQT 365
P+ V +++S +D G + + + DI ++ Y + G + AL
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 366 FNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCH 421
F M + +I T LL+GL ++G +AL F++M V + ++ C
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 422 SGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ V+K + F ++ + + P Y M LC+ G EA L+R M
Sbjct: 434 ADKVEKAWELFCRLPVE--GVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 141/302 (46%), Gaps = 17/302 (5%)
Query: 36 GIVRNDLVVKRVVDFFGKSVDFVD----FGCGFLKQCDWRVSSFPFNSLISSYAGSDRPQ 91
G V N ++ V++ K+ D + F C +++ R + +N+LIS + S R
Sbjct: 708 GFVPNVVIYNTVINGLCKNRDLNNALEVFYC--MEKKGIRADAVTYNTLISGLSNSGRWT 765
Query: 92 IAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLV 151
A R +V+ P+ F A++ + + E ++ +I+ +V +++ NSL+
Sbjct: 766 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 825
Query: 152 HLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSMNVE--- 204
+ + + A +FD M + DVV++ ++I G+ ++ ++ + +F M +
Sbjct: 826 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 885
Query: 205 PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQI 264
+ T+ +L+ G ++G L + +++ + + N L+D + +A +
Sbjct: 886 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 945
Query: 265 FHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACAN 320
+L K DI+++ II GL + + KE+ LFR + G++PD + +++S
Sbjct: 946 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1005
Query: 321 VG 322
G
Sbjct: 1006 KG 1007
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F +LI ++ A Y++++R +P+ +T+ +++ + +G+ + +++
Sbjct: 786 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 845
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMP----VRDVVSWTSIIAGYARAGLFD 192
G D+ N+L+ + K+F EM V D ++ ++I GY +AG +
Sbjct: 846 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 905
Query: 193 EAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALM 249
A +F M V P+ T+ LL +G + + + K V + N ++
Sbjct: 906 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 965
Query: 250 DMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIE 305
+ + L EA +F L +K D +++ ++ISGL + +E+ L R+M G
Sbjct: 966 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 1025
Query: 306 PDGVILTSVL 315
P I L
Sbjct: 1026 PSERIYDETL 1035
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 182/422 (43%), Gaps = 63/422 (14%)
Query: 68 CDW--RVSSFP-----FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCA 120
C+W R SSF FN LI +Y + + A Y Q++ + ++P T+ ++K+
Sbjct: 142 CEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201
Query: 121 MFLGIGE-------GMQIHGIVIK-MGL-VCDLYVQ------------------------ 147
M G+ E MQ H + K +G+ V + Y++
Sbjct: 202 M-AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 148 -------NSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVT 196
N +++LYG + K++ EM ++ ++T+++ +AR GL ++A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 197 MFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYV 253
+F + +EP+ + +L+ R+G I L+ + + N ++D Y
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 254 KCECLSEAKQIFHELPKKDIV----SWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGV 309
+ S+A+ +F E+ + I S ++S + + + + ++M +G+EPD
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 310 ILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEM 369
+L S+L+ +G + ++ DI ++++Y K G +ER + F E+
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Query: 370 PCKN----IFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
KN + TW + + + L+ FEEM+ G P+ T +L+AC V
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560
Query: 426 DK 427
++
Sbjct: 561 EQ 562
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/327 (18%), Positives = 137/327 (41%), Gaps = 47/327 (14%)
Query: 174 DVVSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIH 230
DV+ + +I Y + + EA ++++ + P T+ L+ +G
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG--------- 204
Query: 231 GLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK-DIVSWTSIISGLVQCQ-R 288
+ +RA V +E N H PK + + + I GL++ +
Sbjct: 205 --LIERAEVVLVEMQN------------------HHVSPKTIGVTVYNAYIEGLMKRKGN 244
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRA--IKRDIHIG 346
+E++ +F++M +P +++ Y W Y + R+ K +I
Sbjct: 245 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK-SYMSW-KLYCEMRSHQCKPNICTY 302
Query: 347 TAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVG 402
TA+V+ +A+ G E+A + F ++ +++ +NAL+ + G Y A + F M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 403 EGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLL 462
G P+ ++ ++ A +GL F +M ++ ++P ++ + + +A +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM--KRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 463 DEALMLVRTMP---MAPDVLILGALLS 486
+ +V+ M + PD +L ++L+
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLN 447
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 184/445 (41%), Gaps = 73/445 (16%)
Query: 41 DLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPF------NSLISSYAGSDRPQIAI 94
+L +K +F D +DF D+ V S PF N +I + +RP +AI
Sbjct: 74 ELKLKSGSHYFKSLDDAIDF-------FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAI 126
Query: 95 LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLY 154
YR++ + Y+F ++K + + G + K+G D+ N+L+H
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH-- 184
Query: 155 GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFV 211
G+C + D +S + GY F EAV +F + + + P TF
Sbjct: 185 GLC--------------LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
+L+ G G + LEA+ + M K +
Sbjct: 231 TLINGLCLEGRV------------------LEAAALVNKMVGKGLHI------------- 259
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
D+V++ +I++G+ + K +L L KM + I+PD VI ++++ G +++
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMH 387
+ + I ++ M+D + G A + +M + I T+NAL++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G+ + A K +EM+ P+ VT+ +++ C D + F+ M SP +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA------SPDVV 433
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTM 472
+ + D+ CRA +DE + L+R +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/446 (18%), Positives = 195/446 (43%), Gaps = 39/446 (8%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ FN LI + + ++ + ++ + GF PD TF +L + I E + + G
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 135 VIKMGLVCDLYVQNSLVH-------------LYGVCDDCR--SAGKVFDEMPVR----DV 175
+++ G + + + + +V + G+C + R A + ++M + DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
V++ +I+ G + G A+ + M +++P+ + +++ + G+ + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQR 288
+ ++ ++ N ++D + S+A+++ ++ ++ D++++ ++IS V+ +
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
E+ L +M I PD V S++ D + + + + D+
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 349 MVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
++D+Y + ++ +Q E+ + N T+N L++G AA F+EM+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
P+ +T +L C + +++ + F + + +L Y + +C+ +DE
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA--YNIIIHGMCKGSKVDE 555
Query: 465 ALMLVRTMPM---APDVLILGALLSA 487
A L ++P+ PDV ++S
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
++++ ++I+GL R E+ L KM G+ D V ++++ +GD +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHG 388
++ IK D+ I +A++D K G A F+EM K N+FT+N +++G G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 389 RGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEH 448
R A + +M+ P+ +TF A+++A G + + K ++M+ + + P
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC--IFPDTVT 403
Query: 449 YGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA-CKDKGI 493
Y M C+ D+A + M +PDV+ ++ C+ K +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA-SPDVVTFNTIIDVYCRAKRV 448
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 46/295 (15%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F +N +I + R A R ++ PD TF A++ + + E ++
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
++ + D NS++ YG C R A +FD M DVV++ +II Y RA D
Sbjct: 392 MLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRI------HGL----------- 232
E + + ++ + NT T+ +L+ G NL + + HG+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 233 --------------IFK--RASKVSLE--ASNALMDMYVKCECLSEAKQIFHELP----K 270
+F+ + SK+ L+ A N ++ K + EA +F LP +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD 325
D+ ++ +ISG ++ VLF KM +G EPD +++ C G++D
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 195/446 (43%), Gaps = 36/446 (8%)
Query: 71 RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQ 130
R + F +N +I + A + ++ G +PD+ T+ +M+ G G+ +
Sbjct: 127 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID------GFGKVGR 180
Query: 131 IHGIVI---KMGLVC---DLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----DVVSWTS 180
+ V +M +C D+ N+L++ + + + EM +VVS+++
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240
Query: 181 IIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRA 237
++ + + G+ +A+ ++ M + PN T+ SL+ + GNL R+ + +
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300
Query: 238 SKVSLEASNALMDMYVKCECLSEAKQIFHELPKKDIV----SWTSIISGLVQCQRPKESL 293
+ ++ AL+D E + EA+++F ++ ++ S+ ++I G V+ + +L
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360
Query: 294 VLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMY 353
L ++ GI+PD ++ + + ++ ++ + V + IK + I T ++D Y
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420
Query: 354 AKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMVGE-GSTPN 408
K G L +EM +I T+ L++GL + A+ +F + + G N
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480
Query: 409 EVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALML 468
F A++ C V+ F QM+ Q L P Y + D + G + EAL L
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMV--QKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538
Query: 469 VRTMP---MAPDVLILGAL---LSAC 488
M M D+L +L LS C
Sbjct: 539 RDKMAEIGMKLDLLAYTSLVWGLSHC 564
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 185/429 (43%), Gaps = 45/429 (10%)
Query: 11 VLLDYIRRCNNLKSFKKIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDW 70
+++D + + ++++ + + ++ G+V + + ++D FGK D C F + D
Sbjct: 135 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 194
Query: 71 --RVSSFPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEG 128
+N+LI+ + + I + YR++ NG P+ ++ ++ + EG
Sbjct: 195 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK-----EG 249
Query: 129 MQIHGIVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARA 188
M I YV D R G V +E ++TS+I +
Sbjct: 250 MMQQAI--------KFYV------------DMRRVGLVPNE------YTYTSLIDANCKI 283
Query: 189 GLFDEAVTM---FLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEAS 245
G +A + L + VE N T+ +L+ G + ++ + G + +L +
Sbjct: 284 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 343
Query: 246 NALMDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
NAL+ +VK + + A ++ +EL K D++ + + I GL ++ + + V+ +M
Sbjct: 344 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 403
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
GI+ + +I T+++ A G+ G + + + I+ + ++D K + +
Sbjct: 404 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 463
Query: 362 ALQTFNEMPCK-----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
A+ FN + N + A+++GL + AA FE+MV +G P+ + +++
Sbjct: 464 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 523
Query: 417 TACCHSGLV 425
G V
Sbjct: 524 DGNFKQGNV 532
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 246 NALMDMYVKCECLSEAKQIFHELPKKDIVSWTSIISGLV----QCQRPKESLVLFRKMHS 301
+AL + + L EA Q F ++ + + T +GL+ + + + F+ M
Sbjct: 64 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 123
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
+G P ++ GD++ R + E + R + D +M+D + K G ++
Sbjct: 124 AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 183
Query: 362 ALQTFNEMP---CK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
+ F EM C+ ++ T+NAL+N G+ L+F+ EM G G PN V++ ++
Sbjct: 184 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 243
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
A C G++ + K++ M ++ L P Y + D C+ G L +A L M
Sbjct: 244 AFCKEGMMQQAIKFYVDM--RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 13/251 (5%)
Query: 246 NALMDMYVKCECLSEAKQIFHEL----PKKDIVSWTSIISGLVQCQRPKESLVLFRKMHS 301
N L+ + K + K+ F ++ + + ++ +I + + + + LF +M
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 302 SGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIER 361
G+ PD V S++ VG LD E + + D+ A+++ + K G +
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 362 ALQTFNEMPCK----NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILT 417
L+ + EM N+ +++ L++ G A+KF+ +M G PNE T+ +++
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278
Query: 418 ACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMPMA-- 475
A C G + + N+M+ Q + + Y + D LC A + EA L M A
Sbjct: 279 ANCKIGNLSDAFRLGNEML--QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 336
Query: 476 -PDVLILGALL 485
P++ AL+
Sbjct: 337 IPNLASYNALI 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 111/270 (41%), Gaps = 12/270 (4%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
+N+LI + + A+ ++ G PD + + I + +
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVRD----VVSWTSIIAGYARAGLFD 192
+ G+ + + +L+ Y + + DEM D VV++ +I G + L
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 462
Query: 193 EAVTMFLSMN----VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNAL 248
+AV F ++ ++ N A F +++ G + + + + ++ A +L
Sbjct: 463 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 522
Query: 249 MDMYVKCECLSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGI 304
MD K + EA + ++ K D++++TS++ GL C + +++ +M GI
Sbjct: 523 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 582
Query: 305 EPDGVILTSVLSACANVGDLDYGRWVHEYI 334
PD V+ SVL +G +D + Y+
Sbjct: 583 HPDEVLCISVLKKHYELGCIDEAVELQSYL 612
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 184/445 (41%), Gaps = 73/445 (16%)
Query: 41 DLVVKRVVDFFGKSVDFVDFGCGFLKQCDWRVSSFPF------NSLISSYAGSDRPQIAI 94
+L +K +F D +DF D+ V S PF N +I + +RP +AI
Sbjct: 74 ELKLKSGSHYFKSLDDAIDF-------FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAI 126
Query: 95 LCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLY 154
YR++ + Y+F ++K + + G + K+G D+ N+L+H
Sbjct: 127 SLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH-- 184
Query: 155 GVCDDCRSAGKVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMF---LSMNVEPNTATFV 211
G+C + D +S + GY F EAV +F + + + P TF
Sbjct: 185 GLC--------------LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 212 SLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK 271
+L+ G G + LEA+ + M K +
Sbjct: 231 TLINGLCLEGRV------------------LEAAALVNKMVGKGLHI------------- 259
Query: 272 DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVH 331
D+V++ +I++G+ + K +L L KM + I+PD VI ++++ G +++
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 332 EYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCKNI----FTWNALLNGLAMH 387
+ + I ++ M+D + G A + +M + I T+NAL++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 388 GRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLE 447
G+ + A K +EM+ P+ VT+ +++ C D + F+ M SP +
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA------SPDVV 433
Query: 448 HYGCMTDLLCRAGLLDEALMLVRTM 472
+ + D+ CRA +DE + L+R +
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/446 (18%), Positives = 193/446 (43%), Gaps = 39/446 (8%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ FN LI + + ++ + ++ + GF PD TF +L + I E + + G
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 135 VIKMGLVCDLYVQNSLVH-------------LYGVCDDCR--SAGKVFDEMPVR----DV 175
+++ G + + + + +V + G+C + R A + ++M + DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 176 VSWTSIIAGYARAGLFDEAVTMFLSM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGL 232
V++ +I+ G + G A+ + M +++P+ + +++ + G+ + +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 233 IFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQR 288
+ ++ ++ N ++D + S+A+++ ++ ++ D++++ ++IS V+ +
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 289 PKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTA 348
E+ L +M I PD V S++ D + + + + D+
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNT 437
Query: 349 MVDMYAKCGCIERALQTFNEMP----CKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEG 404
++D+Y + ++ +Q E+ N T+N L++G AA F+EM+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 405 STPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDE 464
P+ +T +L C + +++ + F + Q + Y + +C+ +DE
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFE--VIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 465 ALMLVRTMPM---APDVLILGALLSA 487
A L ++P+ PDV ++S
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 273 IVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHE 332
++++ ++I+GL R E+ L KM G+ D V ++++ +GD +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 333 YIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHG 388
++ IK D+ I +A++D K G A F+EM K N+FT+N +++G G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 389 RGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEH 448
R A + +M+ P+ +TF A+++A G + + K ++M+ + + P
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC--IFPDTVT 403
Query: 449 YGCMTDLLCRAGLLDEALMLVRTMPMAPDVLILGALLSA-CKDKGI 493
Y M C+ D+A + M +PDV+ ++ C+ K +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA-SPDVVTFNTIIDVYCRAKRV 448
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 46/295 (15%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
F +N +I + R A R ++ PD TF A++ + + E ++
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVRDVVSWTSIIAGYARAGLFD 192
++ + D NS++ YG C R A +FD M DVV++ +II Y RA D
Sbjct: 392 MLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 193 EAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRI------HGL----------- 232
E + + ++ + NT T+ +L+ G NL + + HG+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 233 --------------IFK--RASKVSLE--ASNALMDMYVKCECLSEAKQIFHELP----K 270
+F+ + SK+ L+ A N ++ K + EA +F LP +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 271 KDIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSACANVGDLD 325
D+ ++ +ISG ++ VLF KM +G EPD +++ C G++D
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 155/333 (46%), Gaps = 15/333 (4%)
Query: 165 KVFDEMPVRDVVSWTSIIAGYARAGLFDEAVTMFLSMNVEPNTATFVS--LLVGC-GRSG 221
K+ P+ +V ++ +++ A++ +D +++F M V S +++ C R
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 222 NLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHELP----KKDIVSWT 277
+ + G + K + + ++L++ + + + +A + ++ + D+V +
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 278 SIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILTSVLSA-CANVGDLDYGRWVHEYIDR 336
+II G + +++ LF +M G+ D V S+++ C + D R + + + R
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 337 RAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK----NIFTWNALLNGLAMHGRGYA 392
+ I TA++D++ K G A++ + EM + ++FT+N+L+NGL MHGR
Sbjct: 239 DIVPNVITF-TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 393 ALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCM 452
A + + MV +G P+ VT+ ++ C S VD+G K F +M Q L Y +
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM--AQRGLVGDTITYNTI 355
Query: 453 TDLLCRAGLLDEALMLVRTMPMAPDVLILGALL 485
+AG D A + M P++ LL
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 175/407 (42%), Gaps = 43/407 (10%)
Query: 75 FPFNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGI 134
+ +N +I+ R IA+ ++++ G+ PD T +++ G +G ++
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN------GFCQGNRVFDA 158
Query: 135 VIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR-DVVSWTSIIAGYARAGLFDE 193
+ DL + +EM R DVV + +II G + GL ++
Sbjct: 159 I-------DLVSK-------------------MEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 194 AVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMD 250
AV +F M V + T+ SL+ G SG R+ + R ++ A++D
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 251 MYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEP 306
++VK SEA +++ E+ ++ D+ ++ S+I+GL R E+ + M + G P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 307 DGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTF 366
D V ++++ +D G + + +R + D ++ Y + G + A + F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 367 NEMPCK-NIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLV 425
+ M + NI T++ LL GL M+ R AL FE M + T+ ++ C G V
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 426 DKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ F + + L P + Y M CR D++ +L R M
Sbjct: 433 EDAWDLFRSLSCK--GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 183/434 (42%), Gaps = 68/434 (15%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLK---SCAMFLGIGEGMQIHG 133
F+ ++S A S + I + + G D Y++ ++ C+ F+ + + G
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV---IALSVVG 128
Query: 134 IVIKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFD---------EMPVR-DVVSWTSIIA 183
++K G D+ +SL++ G C +VFD EM R DVV + +II
Sbjct: 129 KMMKFGYEPDVVTVSSLIN--GFC----QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 184 GYARAGLFDEAVTMFLSMN---VEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKV 240
G + GL ++AV +F M V + T+ SL+ G SG R+ + R
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 241 SLEASNALMDMYVKCECLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLF 296
++ A++D++VK SEA +++ E+ ++ D+ ++ S+I+GL R E+ +
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 297 RKMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKC 356
M + G PD V ++++ +D G + + +R + D
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT------------- 349
Query: 357 GCIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAIL 416
T+N ++ G GR AA + F M S PN T+ +L
Sbjct: 350 ------------------ITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILL 388
Query: 417 TACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTMP--- 473
C + V+K F M Q+ + + Y + +C+ G +++A L R++
Sbjct: 389 YGLCMNWRVEKALVLFENM--QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 474 MAPDVLILGALLSA 487
+ PDV+ ++S
Sbjct: 447 LKPDVVSYTTMISG 460
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 77 FNSLISSYAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVI 136
F ++I + + A+ Y ++ R PD +T+ +++ M + E Q+ +++
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 137 KMGLVCDLYVQNSLVHLYGVCDDCR--SAGKVFDEMPVR----DVVSWTSIIAGYARAGL 190
G + D+ N+L++ G C R K+F EM R D +++ +II GY +AG
Sbjct: 307 TKGCLPDVVTYNTLIN--GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 191 FDEAVTMFLSMNVEPNTATFVSLLVGCGRSGNLRMGRRIHG--LIFKRASKVSLEASNAL 248
D A +F M+ PN T+ LL G L M R+ ++F+ K +E
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYG------LCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 249 MDMYVKCEC----LSEAKQIFHELP----KKDIVSWTSIISGLVQCQRPKESLVLFRKMH 300
++ + C + +A +F L K D+VS+T++ISG + ++ +S +L+RKM
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 301 SSGIEP 306
G+ P
Sbjct: 479 EDGLLP 484
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 193/464 (41%), Gaps = 21/464 (4%)
Query: 27 KIHAQLVTSGIVRNDLVVKRVVDFFGKSVDFVDFGCGFLKQCDWR---VSSFPFNSLISS 83
K+ +++ +G+ N + V+D G + D F ++ R + ++ L+
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY-DEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 84 YAGSDRPQIAILCYRQIVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCD 143
+ R A +++ + GF P+ + ++ S + + ++I +++ GL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 144 LYVQNSLVHLYGVCDDCRSAGKVFDEMPV----RDVVSWTSIIAGYARAGLFDEAVTMFL 199
N+L+ Y +A ++ EM + S+TS+I +FD A+
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 200 SM---NVEPNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCE 256
M N+ P +L+ G + G + + V SNAL+ +
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 257 CLSEAKQIFHELPKK----DIVSWTSIISGLVQCQRPKESLVLFRKMHSSGIEPDGVILT 312
L EA +I E+ + D VS+ ++ISG ++ E+ + +M G++PD +
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 313 SVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCGCIERALQTFNEMPCK 372
++ N+ ++ + R + D++ + M+D K E + F+EM K
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 373 NI----FTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVTFLAILTACCHSGLVDKG 428
N+ +N L+ GR AL+ E+M +G +PN T+ +++ V++
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 429 RKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGLLDEALMLVRTM 472
+ F +M + L P + HY + D + G + + L+R M
Sbjct: 700 KLLFEEM--RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 33/301 (10%)
Query: 136 IKMGLVCDLYVQNSLVHLYGVCDDCRSAGKVFDEMPVR----------DVVSWTSIIAGY 185
+ G V D N+L+H G+C+ AGK+ + ++ D VS+ ++I+G
Sbjct: 497 LNKGFVVDTRTSNALLH--GLCE----AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 186 ARAGLFDEAVTMFLSMNVE----PNTATFVSLLVGCGRSGNLRMGRRIHGLIFKRASKVS 241
DEA MFL V+ P+ T+ L+ G + + +
Sbjct: 551 CGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 242 LEASNALMDMYVKCECLSEAKQIFHELPKKDI----VSWTSIISGLVQCQRPKESLVLFR 297
+ + ++D K E E ++ F E+ K++ V + +I + R +L L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 298 KMHSSGIEPDGVILTSVLSACANVGDLDYGRWVHEYIDRRAIKRDIHIGTAMVDMYAKCG 357
M GI P+ TS++ + + ++ + + E + ++ ++ TA++D Y K G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 358 ------CIERALQTFNEMPCKNIFTWNALLNGLAMHGRGYAALKFFEEMVGEGSTPNEVT 411
C+ R + + N P N T+ ++ G A G A + EM +G P+ +T
Sbjct: 730 QMVKVECLLREMHSKNVHP--NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 412 F 412
+
Sbjct: 788 Y 788
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/431 (18%), Positives = 172/431 (39%), Gaps = 68/431 (15%)
Query: 100 IVRNGFLPDSYTFPAMLKSCAMFLGIGEGMQIHGIVIKMGLVCDLYVQNSLVHLYGVCDD 159
+V G PD Y F + + + E +++ + + G+ ++ N+++ G+C
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 160 CRSAGKVFDEMPVR----DVVSWTSIIAGYARAGLFDEAVTMFLSMNVE---PNTATFVS 212
A ++M R +++++ ++ G RA +A + M + PN + +
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 213 LLVGCGRSGNLRMGRRIHGLIFKRASKVSLEASNALMDMYVKCECLSEAKQIFHEL---- 268
L+ +G+L I L+ + ++ N L+ Y K A+++ E+
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 269 -------------------------------------PKKDIVSWTSIISGLVQCQRPKE 291
P ++ T++ISGL + + +
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSK 488
Query: 292 SLVLFRKMHSSGIEPDGVILTSVLSACANVGDLDYG-RWVHEYIDRRAIKRDIHIGTAMV 350
+L L+ + + G D ++L G LD R E + R + + T +
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI- 547
Query: 351 DMYAKCGC-----IERALQTFNEMPCKNI----FTWNALLNGLAMHGRGYAALKFFEEMV 401
GC ++ A +EM + + +T++ L+ GL + A++F+++
Sbjct: 548 -----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 402 GEGSTPNEVTFLAILTACCHSGLVDKGRKYFNQMISQQYNLSPRLEHYGCMTDLLCRAGL 461
G P+ T+ ++ CC + ++G+++F++M+S+ N+ P Y + CR+G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGR 660
Query: 462 LDEALMLVRTM 472
L AL L M
Sbjct: 661 LSMALELREDM 671