Jatropha Genome Database

JcCB0005331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0005331.10 - phase: 0 
         (368 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51910.2 | Symbols:  | TCP family transcription factor, putat...   241   5e-64
AT5G51910.1 | Symbols:  | TCP family transcription factor, putat...   241   5e-64
AT2G45680.1 | Symbols:  | TCP family transcription factor, putat...   208   3e-54
AT1G72010.1 | Symbols:  | TCP family transcription factor, putat...   131   8e-31
AT3G47620.1 | Symbols: AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1, CY...   129   3e-30
AT1G35560.1 | Symbols:  | TCP family transcription factor, putat...   127   2e-29
AT1G58100.1 | Symbols:  | TCP family transcription factor, putat...   126   2e-29
AT1G69690.1 | Symbols:  | TCP family transcription factor, putat...   126   3e-29
AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20 | AT-TCP20; transcr...   124   1e-28
AT5G23280.1 | Symbols:  | TCP family transcription factor, putat...   119   3e-27
AT5G08330.1 | Symbols:  | TCP family transcription factor, putat...   118   7e-27
AT5G41030.1 | Symbols:  | TCP family transcription factor, putat...   110   2e-24
AT2G37000.1 | Symbols:  | TCP family transcription factor, putat...   100   3e-21
AT3G45150.1 | Symbols: TCP16 | TCP16 (TCP domain protein 16); tr...    87   1e-17
AT1G58100.2 | Symbols:  | TCP family transcription factor, putat...    73   2e-13

>AT5G51910.2 | Symbols:  | TCP family transcription factor, putative
           | chr5:21094704-21095585 REVERSE
          Length = 293

 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/197 (68%), Positives = 146/197 (74%), Gaps = 17/197 (8%)

Query: 91  KRP-SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEAT 149
           KRP SKDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETIRWLLE AEPAIIEAT
Sbjct: 53  KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEAT 112

Query: 150 GTGTVPAIAVSINGTLKIPTTSPA----RPDGDELLPKKRRKRPSNSDFIDVNEQ-QTSV 204
           GTGTVPAIAVS+NGTLKIPT+SP       DGD  L KKRRKR   SDF+DVN+   +SV
Sbjct: 113 GTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSV 172

Query: 205 SSGLAPISPTAAATLPNYG----GGSTQGLVPFWPMGTFMLPQSGSGSNQSQLWAIPAAA 260
           +SGLAPI      T  NYG      +TQG VPFWPMG      +G      Q+WAIP  A
Sbjct: 173 TSGLAPI------TASNYGVNILNVNTQGFVPFWPMGMGTAFVTGGPDQMGQMWAIPTVA 226

Query: 261 T-PFFNVAARPISSFVS 276
           T PF NV ARP+SS+VS
Sbjct: 227 TAPFLNVGARPVSSYVS 243


>AT5G51910.1 | Symbols:  | TCP family transcription factor, putative
           | chr5:21094704-21095585 REVERSE
          Length = 293

 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/197 (68%), Positives = 146/197 (74%), Gaps = 17/197 (8%)

Query: 91  KRP-SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEAT 149
           KRP SKDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETIRWLLE AEPAIIEAT
Sbjct: 53  KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEAT 112

Query: 150 GTGTVPAIAVSINGTLKIPTTSPA----RPDGDELLPKKRRKRPSNSDFIDVNEQ-QTSV 204
           GTGTVPAIAVS+NGTLKIPT+SP       DGD  L KKRRKR   SDF+DVN+   +SV
Sbjct: 113 GTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHSSV 172

Query: 205 SSGLAPISPTAAATLPNYG----GGSTQGLVPFWPMGTFMLPQSGSGSNQSQLWAIPAAA 260
           +SGLAPI      T  NYG      +TQG VPFWPMG      +G      Q+WAIP  A
Sbjct: 173 TSGLAPI------TASNYGVNILNVNTQGFVPFWPMGMGTAFVTGGPDQMGQMWAIPTVA 226

Query: 261 T-PFFNVAARPISSFVS 276
           T PF NV ARP+SS+VS
Sbjct: 227 TAPFLNVGARPVSSYVS 243


>AT2G45680.1 | Symbols:  | TCP family transcription factor, putative
           | chr2:18820717-18821787 REVERSE
          Length = 356

 Score =  208 bits (530), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/177 (62%), Positives = 127/177 (71%), Gaps = 18/177 (10%)

Query: 94  SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGT 153
           +KDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLE+AEPAII ATGTGT
Sbjct: 75  TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAATGTGT 134

Query: 154 VPAIAVSINGTLKIPTTSPARPDGDELLPKKRRKRPSNSDFIDVNEQQTSVSSGLAPISP 213
           VPAIA+S+NGTLKIPTT+ A  D  E L KK+RKRPSNS++ID+++   S SSGLAPI+ 
Sbjct: 135 VPAIAMSVNGTLKIPTTTNADSDMGENLMKKKRKRPSNSEYIDISD-AVSASSGLAPIAT 193

Query: 214 TAAATLPNYGGGST-------QGLVPFWPM----------GTFMLPQSGSGSNQSQL 253
           T     P     ST       QG+ P W +            F++PQ    SNQ QL
Sbjct: 194 TTTIQPPQALASSTVAQQLLPQGMYPMWAIPSNAMIPTVGAFFLIPQIAGPSNQPQL 250


>AT1G72010.1 | Symbols:  | TCP family transcription factor, putative
           | chr1:27107844-27108971 FORWARD
          Length = 375

 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 57/76 (75%), Positives = 68/76 (89%)

Query: 91  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATG 150
           K+P+KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLL+ AEPAII +TG
Sbjct: 60  KKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTG 119

Query: 151 TGTVPAIAVSINGTLK 166
           TGT+PA   ++N +L+
Sbjct: 120 TGTIPANFSTLNASLR 135


>AT3G47620.1 | Symbols: AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1,
           CYCLOIDEA and PCF (TCP) 14); transcription factor |
           chr3:17559004-17560473 FORWARD
          Length = 489

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 9/94 (9%)

Query: 75  LLQVPKSSNTRALVTAKRP------SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHK 128
           LLQ  + S   A+V AK+P      +KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHK
Sbjct: 95  LLQTQEES---AVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHK 151

Query: 129 SDGETIRWLLEHAEPAIIEATGTGTVPAIAVSIN 162
           SDGETI WLL+ AEP++I ATGTGT+PA   S+N
Sbjct: 152 SDGETIEWLLQQAEPSVIAATGTGTIPANFTSLN 185


>AT1G35560.1 | Symbols:  | TCP family transcription factor, putative
           | chr1:13116099-13117124 REVERSE
          Length = 341

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 66/76 (86%)

Query: 91  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATG 150
           KRPSKDRH KV+GRGRRIRMPA CAAR+FQLTREL HKSDGETI WLL+ AEPAII ATG
Sbjct: 52  KRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATG 111

Query: 151 TGTVPAIAVSINGTLK 166
           TGT+PA   ++N +L+
Sbjct: 112 TGTIPANISTLNISLR 127


>AT1G58100.1 | Symbols:  | TCP family transcription factor, putative
           | chr1:21512680-21513885 REVERSE
          Length = 401

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 67/76 (88%)

Query: 91  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATG 150
           KR +KDRHTKV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLL+ AEPAI+ ATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 151 TGTVPAIAVSINGTLK 166
           TGT+PA   +++ +L+
Sbjct: 117 TGTIPANFSTLSVSLR 132


>AT1G69690.1 | Symbols:  | TCP family transcription factor, putative
           | chr1:26216449-26217426 FORWARD
          Length = 325

 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query: 94  SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGT 153
           +KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETI WLL+ AEPA+I ATGTGT
Sbjct: 52  TKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 111

Query: 154 VPAIAVSIN 162
           +PA   S+N
Sbjct: 112 IPANFTSLN 120


>AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20 | AT-TCP20;
           transcription factor | chr3:9957810-9958754 REVERSE
          Length = 314

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 57/76 (75%), Positives = 64/76 (84%)

Query: 80  KSSNTRALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLE 139
           KS N   L   +  +KDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+
Sbjct: 64  KSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 123

Query: 140 HAEPAIIEATGTGTVP 155
            AEP+II ATG+GT+P
Sbjct: 124 QAEPSIIAATGSGTIP 139


>AT5G23280.1 | Symbols:  | TCP family transcription factor, putative
           | chr5:7843017-7843769 FORWARD
          Length = 250

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/82 (69%), Positives = 66/82 (80%), Gaps = 4/82 (4%)

Query: 86  ALVTAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAI 145
           ++V  K P+KDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI WLL  AEP+I
Sbjct: 31  SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSI 90

Query: 146 IEATGTGTVPA----IAVSING 163
           I ATGTGT PA     +VSI G
Sbjct: 91  IAATGTGTTPASFSTASVSIRG 112


>AT5G08330.1 | Symbols:  | TCP family transcription factor, putative
           | chr5:2680828-2681547 FORWARD
          Length = 239

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)

Query: 78  VPKSSNTRALVTAKRP-SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRW 136
           V ++SN   L   K+P SKDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI W
Sbjct: 14  VEQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEW 73

Query: 137 LLEHAEPAIIEATGTGTVPA 156
           LL  AEP+II ATGTGT PA
Sbjct: 74  LLRQAEPSIIAATGTGTTPA 93


>AT5G41030.1 | Symbols:  | TCP family transcription factor, putative
           | chr5:16428706-16429437 FORWARD
          Length = 243

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 91  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATG 150
           K+P+KDRH KVEGRGRR+R+P  CAARI+QLT+ELGHKSDGET+ WLL+HAEP+I+ AT 
Sbjct: 65  KKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAEPSILSATV 124

Query: 151 TGTVPAIAV 159
            G  P  +V
Sbjct: 125 NGIKPTESV 133


>AT2G37000.1 | Symbols:  | TCP family transcription factor, putative
           | chr2:15540390-15540956 FORWARD
          Length = 188

 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 50/60 (83%)

Query: 94  SKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGT 153
           +KDRHTKV GR RR+ MPA  AARIFQLTRELGHK++GETI WLL  AEP+II ATG GT
Sbjct: 43  TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT 102


>AT3G45150.1 | Symbols: TCP16 | TCP16 (TCP domain protein 16);
           transcription factor | chr3:16531179-16531676 FORWARD
          Length = 165

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 50/63 (79%)

Query: 90  AKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEAT 149
           A+R  KDRH K+ GR RRIR+P + A ++F+LT+ELG K+DGET+ WLL++AEPAI  AT
Sbjct: 13  ARRTPKDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNAEPAIFAAT 72

Query: 150 GTG 152
           G G
Sbjct: 73  GHG 75


>AT1G58100.2 | Symbols:  | TCP family transcription factor, putative
           | chr1:21512680-21513885 REVERSE
          Length = 377

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 34/36 (94%)

Query: 91  KRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELG 126
           KR +KDRHTKV+GRGRRIRMPA CAAR+FQLTRELG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELG 92