Jatropha Genome Database

JcCB0004411.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004411.20 - phase: 0 
         (595 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36700.1 | Symbols:  | cupin family protein | chr4:17298443-1...   379   e-105
AT2G18540.1 | Symbols:  | cupin family protein | chr2:8042382-80...   377   e-104
AT2G28490.1 | Symbols:  | cupin family protein | chr2:12178812-1...   180   2e-45
AT3G22640.1 | Symbols: PAP85 | PAP85; nutrient reservoir | chr3:...    81   2e-15
AT2G28680.1 | Symbols:  | cupin family protein | chr2:12303118-1...    62   1e-09

>AT4G36700.1 | Symbols:  | cupin family protein |
           chr4:17298443-17300337 REVERSE
          Length = 522

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/398 (50%), Positives = 274/398 (68%), Gaps = 23/398 (5%)

Query: 30  PSLVKREDRKSLIVTEYGQISAVDISTGT--IGDYHLEFITLEPNSLFLPVILHSDMVFY 87
           P L+K++  K +  T++GQIS V I  G   +G Y +  ITLEPN++ LP++LHSDMVF+
Sbjct: 46  PLLIKKDQWKPIFETKFGQISTVQIGNGCGGMGPYKIHSITLEPNTILLPLLLHSDMVFF 105

Query: 88  VNTGSGRLSWAEGGKELKRMDIKKGDVYRLHPGSVFFMQSN-----LETERKKLRIYAIF 142
           V++GSG L+W +  +E K  +I+ GDVYRL PGSVF++QS      L T   KL++YAIF
Sbjct: 106 VDSGSGILNWVD--EEAKSTEIRLGDVYRLRPGSVFYLQSKPVDIFLGT---KLKLYAIF 160

Query: 143 SNADEGTYEPHIGAYSSINDLVLGFDTKLLQSAFKVPEEVIEEMKSAMRPPDIVHAAPQK 202
           SN DE  ++P  GAYSSI DL+ GFD  +LQSAF VPE +IE M++  +PP IV      
Sbjct: 161 SNNDECLHDPCFGAYSSITDLMFGFDETILQSAFGVPEGIIELMRNRTKPPLIVSETLCT 220

Query: 203 KSI--LLEIEDRLLQAFVGNKD-------GTLYSSNGGHKKTKKVNLLDGKPDFENCNGW 253
             +    +++ RLL+ F G+ D                 KK K  N+ + +PDFE+  G 
Sbjct: 221 PGVANTWQLQPRLLKLFAGSADLVDNKKKKEKKEKKEKVKKAKTFNVFESEPDFESPYGR 280

Query: 254 SVTVDKKDLKRLKGSGISVFMVNLTKGSMMGPHWNPMANEIAVVLQGLGMVRVV--CSSN 311
           ++T+++KDLK LKGS + V MVNLT+GSMMGPHWNP A EI++VL+G GMVRV+    S+
Sbjct: 281 TITINRKDLKVLKGSMVGVSMVNLTQGSMMGPHWNPWACEISIVLKGAGMVRVLRSSISS 340

Query: 312 VNETECKNMRFRVQEGDVFAIPRFHPMAQMAFNNESLVFMGFSTSTSKNDPQFLAGKRSV 371
              +ECKN+RF+V+EGD+FA+PR HPMAQM+FNN+SLVF+GF+TS   N+PQFLAG+ S 
Sbjct: 341 NTSSECKNVRFKVEEGDIFAVPRLHPMAQMSFNNDSLVFVGFTTSAKNNEPQFLAGEDSA 400

Query: 372 FQTLNKEILALSFNVPNTTVDKLLNPQEEEIILECISC 409
            + L++++LA S NV + T+D LL  Q+E +ILEC SC
Sbjct: 401 LRMLDRQVLAASLNVSSVTIDGLLGAQKEAVILECHSC 438


>AT2G18540.1 | Symbols:  | cupin family protein |
           chr2:8042382-8045008 REVERSE
          Length = 707

 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/392 (50%), Positives = 278/392 (70%), Gaps = 25/392 (6%)

Query: 30  PSLVKREDRKSLIVTEYGQISAVDISTGTIGDYHLEFITLEPNSLFLPVILHSDMVFYVN 89
           P LVK++ R S++ TE+G ISAV I  G    YH++FITLEPN+L LP++LHSDMVF+V+
Sbjct: 42  PLLVKKDQRTSVVATEFGNISAVQIGDG----YHIQFITLEPNALLLPLLLHSDMVFFVH 97

Query: 90  TGSGRLSWAEGGKELKRMDIKKGDVYRLHPGSVFFMQSNLETERKKLRIYAIFSNADEGT 149
           TG+G L+W +   E +++++++GDV+RL  G+VF++ SN     +KLR+YAIF N  +  
Sbjct: 98  TGTGILNWIDEESE-RKLELRRGDVFRLRSGTVFYVHSN-----EKLRVYAIF-NVGKCL 150

Query: 150 YEPHIGAYSSINDLVLGFDTKLLQSAFKVPEEVIEEMKSAMRPPDIVHAAPQKKSILLE- 208
            +P +GAYSS+ DL+LGFD + L+SAF VPE+++ +++ A +PP IV+A P+ ++  LE 
Sbjct: 151 NDPCLGAYSSVRDLLLGFDDRTLRSAFAVPEDILRKIRDATKPPLIVNALPRNRTQGLEE 210

Query: 209 --IEDRLLQAFVGNKDGTLYSS-----NGGHKKTKKVNLLDGKPDFENCNGWSVTVDKKD 261
              + RL++ FV  +D T + +     +   KK++  N+ +  PDFEN NG S+ VD+KD
Sbjct: 211 DKWQSRLVRLFVSVEDVTDHLAMKPIVDTNKKKSRTFNVFEEDPDFENNNGRSIVVDEKD 270

Query: 262 LKRLKGSGISVFMVNLTKGSMMGPHWNPMANEIAVVLQGLGMVRVVCSSNVNETECKNMR 321
           L  LKGS   VFMVNLTKGSM+GPHWNP A EI++VL+G GMVRVV   ++  + CKN R
Sbjct: 271 LDALKGSRFGVFMVNLTKGSMIGPHWNPSACEISIVLEGEGMVRVVNQQSL--SSCKNDR 328

Query: 322 ----FRVQEGDVFAIPRFHPMAQMAFNNESLVFMGFSTSTSKNDPQFLAGKRSVFQTLNK 377
               F V+EGDVF +P+FHPMAQM+F N S VFMGFSTS   N PQFL G+ SV + L++
Sbjct: 329 KSESFMVEEGDVFVVPKFHPMAQMSFENSSFVFMGFSTSAKTNHPQFLVGQSSVLKVLDR 388

Query: 378 EILALSFNVPNTTVDKLLNPQEEEIILECISC 409
           +++A+SFN+ N T+  LL  Q+E +I EC SC
Sbjct: 389 DVVAVSFNLSNETIKGLLKAQKESVIFECASC 420


>AT2G28490.1 | Symbols:  | cupin family protein |
           chr2:12178812-12180983 REVERSE
          Length = 511

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 206/421 (48%), Gaps = 56/421 (13%)

Query: 29  RPSLVKREDRKSLIVTEYGQISAVDISTGTIGD--YHLEFITLEPNSLFLPVILHSDMVF 86
           R   + RE R+ +I +E G++  V    G I +   H+ F+T+EP +LF+P  L S ++ 
Sbjct: 83  RGWFMMRESRQ-VIKSEGGEMRVVLSPRGRIIEKPMHIGFLTMEPKTLFVPQYLDSSLLI 141

Query: 87  YVNTGSGRLSWAEGGKELKRMDIKKGDVYRLHPGSVFFMQSNLETERKKLRIYAIFSNAD 146
           ++  G   L       E     +K GD+Y +  GSVF++ +    +R  + I +I     
Sbjct: 142 FIRQGEATLG-VICKDEFGERKLKAGDIYWIPAGSVFYLHNTGLGQRLHV-ICSIDPTQS 199

Query: 147 EG--TYEP-HIGAYSSINDLVLGFDTKLLQSAFKVP-EEVIEEMKSAMRPPDIVHAA--- 199
            G  T++P +IG   S   ++ GFD   L SAF V   E+ + M S  R P IV+     
Sbjct: 200 LGFETFQPFYIGGGPS--SVLAGFDPHTLTSAFNVSLPELQQMMMSQFRGP-IVYVTEGP 256

Query: 200 -PQKKSIL------LEIEDR------LLQAFVGNKDGTLYSS------------------ 228
            PQ +S +      L  E++      LL+   G+     YSS                  
Sbjct: 257 QPQPQSTVWTQFLGLRGEEKHKQLKKLLETKQGSPQDQQYSSGWSWRNIVRSILDLTEEK 316

Query: 229 ---NGGHKKTKKVNLLD--GKPDFENCNGWSVTVDKKDLKRLKGSGISVFMVNLTKGSMM 283
              +G  +     N+ D   KP F+N  GWS+ +D  D K LK SGI V++VNLT G+MM
Sbjct: 317 NKGSGSSECEDSYNIYDKKDKPSFDNKYGWSIALDYDDYKPLKHSGIGVYLVNLTAGAMM 376

Query: 284 GPHWNPMANEIAVVLQGLGMVRVVCSSNVNETECKNMRFRVQEGDVFAIPRFHPMAQMAF 343
            PH NP A E  +VL G G ++VV     N T   N R  V  GDVF IPR+    Q+A 
Sbjct: 377 APHMNPTATEYGIVLAGSGEIQVVFP---NGTSAMNTRVSV--GDVFWIPRYFAFCQIAS 431

Query: 344 NNESLVFMGFSTSTSKNDPQFLAGKRSVFQTLNKEILALSFNVPNTTVDKLLNPQEEEII 403
                 F+GF+TS  KN PQFL G  S+ +TLN   L+++F V   T+ + +  Q E +I
Sbjct: 432 RTGPFEFVGFTTSAHKNRPQFLVGSNSLLRTLNLTSLSIAFGVDEETMRRFIEAQREAVI 491

Query: 404 L 404
           L
Sbjct: 492 L 492


>AT3G22640.1 | Symbols: PAP85 | PAP85; nutrient reservoir |
           chr3:8011902-8013883 REVERSE
          Length = 486

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 146/373 (39%), Gaps = 50/373 (13%)

Query: 59  IGDYHLEFITLEPNSLFLPVILHSDMVFYVNTGSGRLSWAEGGKELKRMDIKKGDVYRLH 118
           I +Y    + +EP + F+P  L +D VF V  G G + +    K  +   I KGDV R+ 
Sbjct: 99  IENYRFSLVEMEPTTFFVPHHLDADAVFIVLQGKGVIEFVT-DKTKESFHITKGDVVRIP 157

Query: 119 PGSVFFMQSNLETERKKLRIYAIFSNADEGTYEPHIGAYSSINDLVL-GFDTKLLQSAFK 177
            G   F+ +  +T   +L    +  N + G Y+ +  A S        GF  ++L ++F 
Sbjct: 158 SGVTNFITNTNQTVPLRLAQITVPVN-NPGNYKDYFPAASQFQQSYFNGFTKEVLSTSFN 216

Query: 178 VPEEVIEEMKSAMR----------PPDIVHAAPQKKSILLEIEDRLLQAFVGNKDGTLYS 227
           VPEE++  + +  +           PD +    +  +          +        TL++
Sbjct: 217 VPEELLGRLVTRSKEIGQGIIRRISPDQIKELAEHATSPSNKHKAKKEKEEDKDLRTLWT 276

Query: 228 SNGGHKKTKKVNLLDGKPDFENCNGWSVTVDKKDLKRLKGSGISVFMVNLTKGSMMGPHW 287
                      NL    P + N  G       K+  +L+   I+    N+T+GS+  PH+
Sbjct: 277 P---------FNLFAIDPIYSNDFGHFHEAHPKNYNQLQDLHIAAAWANMTQGSLFLPHF 327

Query: 288 NPMANEIAVVLQGLGMVRVVC----------------------SSNVNETECKNMRFRVQ 325
           N     +  V  G     +                        S NV++        RV 
Sbjct: 328 NSKTTFVTFVENGCARFEMATPYKFQRGQQQWPGQGQEEEEDMSENVHKVVS-----RVC 382

Query: 326 EGDVFAIPRFHPMAQMAFNNESLVFMGFSTSTSKNDPQFLAGKRSVFQTLNKEILALSFN 385
           +G+VF +P  HP   ++  ++  + +GF    + +   FLAG+ ++   LN     ++F 
Sbjct: 383 KGEVFIVPAGHPFTILS-QDQDFIAVGFGIYATNSKRTFLAGEENLLSNLNPAATRVTFG 441

Query: 386 VPNTTVDKLLNPQ 398
           V +   +KL   Q
Sbjct: 442 VGSKVAEKLFTSQ 454


>AT2G28680.1 | Symbols:  | cupin family protein |
           chr2:12303118-12304747 REVERSE
          Length = 356

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 136/324 (41%), Gaps = 36/324 (11%)

Query: 67  ITLEPNSLFLPVILHSDMVFYVNTGSGRLSWAEGGKELKRMDIKKGDVYRLHPGSVFFMQ 126
           + LE   L LP    S  V YV  G+G        KE K + IKKGD   L  G V +  
Sbjct: 42  LALEKYGLALPRYSDSPKVAYVLQGAGTAGIVLPEKEEKVIAIKKGDSIALPFGVVTWWF 101

Query: 127 SNLETERKKLRIYAIFSNADEGTYEPHIGAYSSINDLVLGFDTKLLQSAFKVPEEVIEEM 186
           +N +TE   L +         G +       +  N +  GF T+ +  A+ + E  ++++
Sbjct: 102 NNEDTELVVLFLGETHKGHKAGQFTDFY--LTGSNGIFTGFSTEFVGRAWDLDETTVKKL 159

Query: 187 KSAMRPPDIVHAAPQKKSILLEIEDRLLQAFVGNKDGTLYSSNGGHKKTKKVNLLDGKPD 246
             +     IV      K                     +     G +K   +N L+   D
Sbjct: 160 VGSQTGNGIVKVDASLK---------------------MPEPKKGDRKGFVLNCLEAPLD 198

Query: 247 FENCNGWSVTV-DKKDLKRLKGSGISVFMVNLTKGSMMGPHWN-PMANEIAVVLQGLGMV 304
            +  +G  V V + K+L  +   G    +V +   SM  P ++   A ++  ++ G G V
Sbjct: 199 VDIKDGGRVVVLNTKNLPLVGEVGFGADLVRIDGHSMCSPGFSCDSALQVTYIVGGSGRV 258

Query: 305 RVVCSSNVNETECKNMRFRVQEGDVFAIPRFHPMAQMAFNNESLVFMGFSTSTSKNDPQF 364
           ++V +      E       V+ G +F +PRF  ++++A +++ L +    T+    DP F
Sbjct: 259 QIVGADGKRVLET-----HVKAGVLFIVPRFFVVSKIA-DSDGLSWFSIVTTP---DPIF 309

Query: 365 --LAGKRSVFQTLNKEILALSFNV 386
             LAG+ SV++ L+ E+L  +F V
Sbjct: 310 THLAGRTSVWKALSPEVLQAAFKV 333