Jatropha Genome Database

JcCB0004411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0004411.10 + phase: 0 
         (417 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66720.1 | Symbols:  | 5-azacytidine resistance protein -rela...   421   e-118
AT5G66720.2 | Symbols:  | 5-azacytidine resistance protein -rela...   420   e-117
AT4G16580.1 | Symbols:  | catalytic | chr4:9341152-9342555 REVERSE    418   e-117
AT4G33500.1 | Symbols:  | protein phosphatase 2C-related / PP2C-...   150   2e-36
AT2G30170.1 | Symbols:  | catalytic | chr2:12879802-12881474 REV...   137   1e-32
AT2G30170.2 | Symbols:  | catalytic | chr2:12879802-12881046 REV...   122   5e-28

>AT5G66720.1 | Symbols:  | 5-azacytidine resistance protein -related
           | chr5:26639015-26640545 REVERSE
          Length = 414

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/428 (55%), Positives = 293/428 (68%), Gaps = 28/428 (6%)

Query: 1   MPSGFLVKLN----LGFRTLIIARNSAFSLNNPTQLSVRRSLSGYS-----MAASGSKAV 51
           M +  L +LN     GF+ ++  ++ +F  +N  Q   RR  S  S     MAASGS  V
Sbjct: 1   MSATALSRLNPVSQFGFQRIVAGKSKSF-FSNSGQ---RRLFSDSSRFRQAMAASGSLPV 56

Query: 52  FGDTYIDDMITTCGNGLDFSKP--SGVFFADRSRASCLKASVRM-RNGELPNSRLVCGYS 108
           FGD  +DD++TTC NGLDF+K   SG  F      +C  AS+R+ + G +  +RLVC YS
Sbjct: 57  FGDACLDDLVTTCSNGLDFTKKRSSGGSFT----INCPVASMRLGKRGGMMKNRLVCHYS 112

Query: 109 SFDAIIGSSNLNGFVAGPSLKNFHTLSSAKLSAGAARDVS-FDGNSREEQLGNSTMVSGQ 167
             D +  S  L G ++    K+ HT   A  S G A ++S  +G S+E     +T  S +
Sbjct: 113 VVDPLEKSRALFGTLS----KSVHTSPMACFSVGPAHELSSLNGGSQESP--PTTTTSLK 166

Query: 168 TLKLLSGSCYLPHPDKEETGGEDAHFICADEQXXXXXXXXXXXXXXXXNAGLYSRELMSN 227
           +L+L+SGSCYLPHP+KE TGGEDAHFIC +EQ                NAGL+SRELMS 
Sbjct: 167 SLRLVSGSCYLPHPEKEATGGEDAHFICDEEQAIGVADGVGGWAEVGVNAGLFSRELMSY 226

Query: 228 SVSAIKDEPVGS-IDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAINLGDSGFMVVRD 286
           SVSAI+++  GS IDP  VLEKAHS TKAKGSSTACI+ L ++G+ AINLGDSGF VVR+
Sbjct: 227 SVSAIQEQHKGSSIDPLVVLEKAHSQTKAKGSSTACIIVLKDKGLHAINLGDSGFTVVRE 286

Query: 287 GSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTDGLFDNLYNNE 346
           G+TVFQSPVQQHGFNFTYQLESGN  D PSS QVF   V  GDVIVAGTDG++DNLYN E
Sbjct: 287 GTTVFQSPVQQHGFNFTYQLESGNSADVPSSGQVFTIDVQSGDVIVAGTDGVYDNLYNEE 346

Query: 347 VTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGFRYYGGKLDDITV 406
           +T  VV + RAGL P+ TAQKIA+LARQRA+D+ RQ+PF+ AAQ+AG+RYYGGKLDDIT 
Sbjct: 347 ITGVVVSSVRAGLDPKGTAQKIAELARQRAVDKKRQSPFATAAQEAGYRYYGGKLDDITA 406

Query: 407 VVSYVMSS 414
           VVSYV SS
Sbjct: 407 VVSYVTSS 414


>AT5G66720.2 | Symbols:  | 5-azacytidine resistance protein -related
           | chr5:26639015-26640545 REVERSE
          Length = 411

 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/428 (55%), Positives = 291/428 (67%), Gaps = 31/428 (7%)

Query: 1   MPSGFLVKLN----LGFRTLIIARNSAFSLNNPTQLSVRRSLSGYS-----MAASGSKAV 51
           M +  L +LN     GF+ ++  ++ +F  +N  Q   RR  S  S     MAASGS  V
Sbjct: 1   MSATALSRLNPVSQFGFQRIVAGKSKSF-FSNSGQ---RRLFSDSSRFRQAMAASGSLPV 56

Query: 52  FGDTYIDDMITTCGNGLDFSKP--SGVFFADRSRASCLKASVRM-RNGELPNSRLVCGYS 108
           FGD  +DD++TTC NGLDF+K   SG  F      +C  AS+R+ + G +  +RLVC YS
Sbjct: 57  FGDACLDDLVTTCSNGLDFTKKRSSGGSFT----INCPVASMRLGKRGGMMKNRLVCHYS 112

Query: 109 SFDAIIGSSNLNGFVAGPSLKNFHTLSSAKLSAGAARDVS-FDGNSREEQLGNSTMVSGQ 167
             D +  S  L G ++    K+ HT   A  S G A ++S  +G S+E     +T     
Sbjct: 113 VVDPLEKSRALFGTLS----KSVHTSPMACFSVGPAHELSSLNGGSQESPPTTTT----- 163

Query: 168 TLKLLSGSCYLPHPDKEETGGEDAHFICADEQXXXXXXXXXXXXXXXXNAGLYSRELMSN 227
           +LKL+SGSCYLPHP+KE TGGEDAHFIC +EQ                NAGL+SRELMS 
Sbjct: 164 SLKLVSGSCYLPHPEKEATGGEDAHFICDEEQAIGVADGVGGWAEVGVNAGLFSRELMSY 223

Query: 228 SVSAIKDEPVGS-IDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAINLGDSGFMVVRD 286
           SVSAI+++  GS IDP  VLEKAHS TKAKGSSTACI+ L ++G+ AINLGDSGF VVR+
Sbjct: 224 SVSAIQEQHKGSSIDPLVVLEKAHSQTKAKGSSTACIIVLKDKGLHAINLGDSGFTVVRE 283

Query: 287 GSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTDGLFDNLYNNE 346
           G+TVFQSPVQQHGFNFTYQLESGN  D PSS QVF   V  GDVIVAGTDG++DNLYN E
Sbjct: 284 GTTVFQSPVQQHGFNFTYQLESGNSADVPSSGQVFTIDVQSGDVIVAGTDGVYDNLYNEE 343

Query: 347 VTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGFRYYGGKLDDITV 406
           +T  VV + RAGL P+ TAQKIA+LARQRA+D+ RQ+PF+ AAQ+AG+RYYGGKLDDIT 
Sbjct: 344 ITGVVVSSVRAGLDPKGTAQKIAELARQRAVDKKRQSPFATAAQEAGYRYYGGKLDDITA 403

Query: 407 VVSYVMSS 414
           VVSYV SS
Sbjct: 404 VVSYVTSS 411


>AT4G16580.1 | Symbols:  | catalytic | chr4:9341152-9342555 REVERSE
          Length = 467

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/379 (58%), Positives = 266/379 (70%), Gaps = 14/379 (3%)

Query: 42  SMAASGSKAVFGDTYIDDMITTCGNGLDFSKPSGVFFADRSRASCLKASVRMRNGELPNS 101
           SMA+ GSK++F D +   +++    G       G+   D       + S+R+R  +    
Sbjct: 93  SMASLGSKSLFVDRHSASLVSKRFTG-------GMVSGDGPNRG--RISMRLRGKDHNEK 143

Query: 102 RLVCGYSSFDAIIGSSNLNGFVAGPSLKNFHTLSSAKLSAGAARDVSFDGNSREEQLGNS 161
             +C Y ++        LN    G   +  H+  S +LSAG A DVS D +  +EQ+ +S
Sbjct: 144 STICAYFAYRGAKRWIYLNQQRRGMGFRGLHSSLSNRLSAGNAPDVSLDNSVTDEQVRDS 203

Query: 162 T-----MVSGQTLKLLSGSCYLPHPDKEETGGEDAHFICADEQXXXXXXXXXXXXXXXXN 216
           +      +  + LKL+SGSCYLPHPDKE TGGEDAHFICA+EQ                +
Sbjct: 204 SDSVAAKLCTKPLKLVSGSCYLPHPDKEATGGEDAHFICAEEQALGVADGVGGWAELGID 263

Query: 217 AGLYSRELMSNSVSAIKDEPVGSIDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAINL 276
           AG YSRELMSNSV+AI+DEP GSIDPARVLEKAH+ TK++GSSTACI+ALTN+G+ AINL
Sbjct: 264 AGYYSRELMSNSVNAIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINL 323

Query: 277 GDSGFMVVRDGSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTD 336
           GDSGFMVVR+G TVF+SPVQQH FNFTYQLESG +GD PSS QVF   V+PGDVI+AGTD
Sbjct: 324 GDSGFMVVREGHTVFRSPVQQHDFNFTYQLESGRNGDLPSSGQVFTVAVAPGDVIIAGTD 383

Query: 337 GLFDNLYNNEVTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGFRY 396
           GLFDNLYNNE+TA VVHA RA + PQ TAQKIA LARQRA D+NRQTPFS AAQDAGFRY
Sbjct: 384 GLFDNLYNNEITAIVVHAVRANIDPQVTAQKIAALARQRAQDKNRQTPFSTAAQDAGFRY 443

Query: 397 YGGKLDDITVVVSYVMSSN 415
           YGGKLDDITVVVSYV +S 
Sbjct: 444 YGGKLDDITVVVSYVAASK 462


>AT4G33500.1 | Symbols:  | protein phosphatase 2C-related /
           PP2C-related | chr4:16112835-16116243 REVERSE
          Length = 724

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 137/254 (53%), Gaps = 5/254 (1%)

Query: 159 GNSTMVSGQTLKLLSGSCYLPHPDKEETGGEDAHFICADEQXXXXXXXXXXXXXXXXNAG 218
           G   +VS +   L SG   L  P K   G EDA+FI +                   N G
Sbjct: 470 GREELVS-KAFYLDSGFASLQSPFKALAGREDAYFI-SHHNWIGIADGVSQWSFEGINKG 527

Query: 219 LYSRELMSNSVSAIKDEPVGSIDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAINLGD 278
           +Y++ELMSN    I +E     DP +VL ++ + TK+ GSSTA I  L N  +   N+GD
Sbjct: 528 MYAQELMSNCEKIISNETAKISDPVQVLHRSVNETKSSGSSTALIAHLDNNELHIANIGD 587

Query: 279 SGFMVVRDGSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTDGL 338
           SGFMV+RDG+ +  S    H F F   +  G   D    ++V+   +  GDV++A TDGL
Sbjct: 588 SGFMVIRDGTVLQNSSPMFHHFCFPLHITQG--CDVLKLAEVYHVNLEEGDVVIAATDGL 645

Query: 339 FDNLYNNEVTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGFR-YY 397
           FDNLY  E+ + V  + +  L PQ  A+ +A  A++    +  +TPF+ AA++ G+  + 
Sbjct: 646 FDNLYEKEIVSIVCGSLKQSLEPQKIAELVAAKAQEVGRSKTERTPFADAAKEEGYNGHK 705

Query: 398 GGKLDDITVVVSYV 411
           GGKLD +TV++S+V
Sbjct: 706 GGKLDAVTVIISFV 719


>AT2G30170.1 | Symbols:  | catalytic | chr2:12879802-12881474
           REVERSE
          Length = 298

 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 136/259 (52%), Gaps = 18/259 (6%)

Query: 169 LKLLSGSCYLPHPDKEETGGEDAHFICADEQXXXXXXXXXX-XXXXXXNAGLYSRELMSN 227
           L L  G   +PHPDK E GGEDA F+ +                    +  L+S+ELM+N
Sbjct: 45  LSLSVGIHAIPHPDKVEKGGEDAFFVSSYRGGVMAVADGVSGWAEQDVDPSLFSKELMAN 104

Query: 228 SVSAIKDEPVGSIDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAI-NLGDSGFMVVRD 286
           +   + D+ V   DP  +++KAH+ T ++GS+T  +  L   GI  I N+GD G  ++R+
Sbjct: 105 ASRLVDDQEV-RYDPGFLIDKAHTATTSRGSATIILAMLEEVGILKIGNVGDCGLKLLRE 163

Query: 287 GSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTDGLFDNLYNNE 346
           G  +F +  Q+H F+  YQL S         +   I  V  GDVIV G+DGLFDN++++E
Sbjct: 164 GQIIFATAPQEHYFDCPYQLSSEGSAQTYLDASFSIVEVQKGDVIVMGSDGLFDNVFDHE 223

Query: 347 VTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGF-----------R 395
           + + V            +++ +A++A   + D   ++P++  A+  GF           +
Sbjct: 224 IVSIVTKHTDVA----ESSRLLAEVASSHSRDTEFESPYALEARAKGFDVPLWKKVLGKK 279

Query: 396 YYGGKLDDITVVVSYVMSS 414
             GGKLDD+TV+V+ V+SS
Sbjct: 280 LTGGKLDDVTVIVAKVVSS 298


>AT2G30170.2 | Symbols:  | catalytic | chr2:12879802-12881046
           REVERSE
          Length = 221

 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 17/208 (8%)

Query: 219 LYSRELMSNSVSAIKDEPVGSIDPARVLEKAHSNTKAKGSSTACIVALTNEGIRAI-NLG 277
           L+S+ELM+N+   + D+ V   DP  +++KAH+ T ++GS+T  +  L   GI  I N+G
Sbjct: 19  LFSKELMANASRLVDDQEV-RYDPGFLIDKAHTATTSRGSATIILAMLEEVGILKIGNVG 77

Query: 278 DSGFMVVRDGSTVFQSPVQQHGFNFTYQLESGNHGDQPSSSQVFIFPVSPGDVIVAGTDG 337
           D G  ++R+G  +F +  Q+H F+  YQL S         +   I  V  GDVIV G+DG
Sbjct: 78  DCGLKLLREGQIIFATAPQEHYFDCPYQLSSEGSAQTYLDASFSIVEVQKGDVIVMGSDG 137

Query: 338 LFDNLYNNEVTAAVVHAARAGLGPQATAQKIADLARQRALDRNRQTPFSAAAQDAGF--- 394
           LFDN++++E+ + V            +++ +A++A   + D   ++P++  A+  GF   
Sbjct: 138 LFDNVFDHEIVSIVTKHTDVA----ESSRLLAEVASSHSRDTEFESPYALEARAKGFDVP 193

Query: 395 --------RYYGGKLDDITVVVSYVMSS 414
                   +  GGKLDD+TV+V+ V+SS
Sbjct: 194 LWKKVLGKKLTGGKLDDVTVIVAKVVSS 221