Jatropha Genome Database

JcCB0001411.50
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0001411.50 - phase: 0 /pseudo/partial
         (196 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55130.1 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,...   165   2e-41
AT5G55130.2 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,...   165   2e-41
AT5G19370.1 | Symbols:  | rhodanese-like domain-containing prote...    62   2e-10

>AT5G55130.1 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,
           REDUCTASE AND XANTHINE DEHYDROGENASE 5);
           Mo-molybdopterin cofactor sulfurase |
           chr5:22373374-22376028 REVERSE
          Length = 464

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 72  RLLSAGSRITCKDFNEKVVKGEAHVLVDVRPAHHFKIVALPNALNIPLTSLEARLPEISS 131
            LL A SRI+ K+F E + K E HVL+DVRP+HH+KIV+LP++LNIPL +LE RL E++S
Sbjct: 339 NLLPAESRISSKEFKEILQKKEQHVLLDVRPSHHYKIVSLPDSLNIPLANLETRLNELTS 398

Query: 132 ALKEAG-GCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVD 190
           ALKE G G   TES +  S+++VCRRGNDSQRAVQ L   GF SAKDIIGGLEAW+ +V+
Sbjct: 399 ALKEKGNGHANTESCTNPSVFVVCRRGNDSQRAVQYLRESGFDSAKDIIGGLEAWAANVN 458

Query: 191 PKFPTY 196
           P FPTY
Sbjct: 459 PNFPTY 464


>AT5G55130.2 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE,
           REDUCTASE AND XANTHINE DEHYDROGENASE 5);
           Mo-molybdopterin cofactor sulfurase |
           chr5:22373374-22376028 REVERSE
          Length = 437

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 72  RLLSAGSRITCKDFNEKVVKGEAHVLVDVRPAHHFKIVALPNALNIPLTSLEARLPEISS 131
            LL A SRI+ K+F E + K E HVL+DVRP+HH+KIV+LP++LNIPL +LE RL E++S
Sbjct: 312 NLLPAESRISSKEFKEILQKKEQHVLLDVRPSHHYKIVSLPDSLNIPLANLETRLNELTS 371

Query: 132 ALKEAG-GCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFTSAKDIIGGLEAWSHDVD 190
           ALKE G G   TES +  S+++VCRRGNDSQRAVQ L   GF SAKDIIGGLEAW+ +V+
Sbjct: 372 ALKEKGNGHANTESCTNPSVFVVCRRGNDSQRAVQYLRESGFDSAKDIIGGLEAWAANVN 431

Query: 191 PKFPTY 196
           P FPTY
Sbjct: 432 PNFPTY 437


>AT5G19370.1 | Symbols:  | rhodanese-like domain-containing protein
           / PPIC-type PPIASE domain-containing protein |
           chr5:6524247-6526629 REVERSE
          Length = 299

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 23/143 (16%)

Query: 63  RSLLSLHCPRLLSAGSRITCKD---------FNEKVVKGEAHVLVDVRPAHHFKIVALPN 113
           R+   LH  ++LS   R   KD           + V   EA  L+DVR  +  +I +LP 
Sbjct: 171 RTQFGLHLLQVLS--EREPVKDIQVEELHSKMQDPVFMDEAQ-LIDVREPNEIEIASLPG 227

Query: 114 ALNIPLTSLEARLPEISSALKEAGGCRGTESESGVSLYIVCRRGNDSQRAVQMLHSKGFT 173
               PL       P+I+S L         E ++    +++C+ G  S +    L S+GF 
Sbjct: 228 FKVFPLRQFGTWAPDITSKL-------NPEKDT----FVLCKVGGRSMQVANWLQSQGFK 276

Query: 174 SAKDIIGGLEAWSHDVDPKFPTY 196
           S  +I GG++A+S  VDP  PTY
Sbjct: 277 SVYNITGGIQAYSLKVDPSIPTY 299