Jatropha Genome Database
- JcCA0317901.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0317901.20 + phase: 0
(885 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22030.1 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE ... 1135 0.0
AT5G22030.2 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE ... 1135 0.0
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | UBP5 (UBIQUITIN-SP... 683 0.0
AT4G10570.1 | Symbols: UBP9 | UBP9 (UBIQUITIN-SPECIFIC PROTEASE ... 663 0.0
AT4G10590.1 | Symbols: UBP10 | ubiquitin carboxyl-terminal hydro... 651 0.0
AT4G10590.2 | Symbols: UBP10 | ubiquitin carboxyl-terminal hydro... 651 0.0
AT1G32850.1 | Symbols: UBP11 | UBP11 (UBIQUITIN-SPECIFIC PROTEAS... 627 e-179
AT5G46740.1 | Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEAS... 100 4e-21
AT4G31670.1 | Symbols: UBP18 | UBP18 (UBIQUITIN-SPECIFIC PROTEAS... 92 1e-18
AT1G17110.1 | Symbols: UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEAS... 92 2e-18
AT2G24640.1 | Symbols: UBP19 | UBP19 (UBIQUITIN-SPECIFIC PROTEAS... 91 3e-18
AT4G17895.1 | Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEAS... 90 5e-18
AT4G24560.1 | Symbols: UBP16 | UBP16 (UBIQUITIN-SPECIFIC PROTEAS... 89 1e-17
AT5G10790.1 | Symbols: UBP22 | UBP22 (UBIQUITIN-SPECIFIC PROTEAS... 86 1e-16
AT5G57990.1 | Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEAS... 85 2e-16
AT5G65450.1 | Symbols: UBP17 | UBP17 (UBIQUITIN-SPECIFIC PROTEAS... 84 3e-16
AT1G04860.1 | Symbols: UBP2, ATUBP2 | UBP2 (UBIQUITIN-SPECIFIC P... 82 2e-15
AT4G30890.2 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEAS... 78 2e-14
AT4G30890.1 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEAS... 78 2e-14
AT2G32780.1 | Symbols: UBP1, ATUBP1 | UBP1 (UBIQUITIN-SPECIFIC P... 78 2e-14
AT3G14400.1 | Symbols: UBP25 | UBP25 (UBIQUITIN-SPECIFIC PROTEAS... 75 1e-13
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ATUBP3 (ARABIDOPSIS THALIA... 75 3e-13
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ATUBP4 (ARABIDOPSIS THALIA... 74 3e-13
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | UBP26 (UBIQUITIN-... 56 1e-07
AT4G39370.1 | Symbols: UBP27 | UBP27 (UBIQUITIN-SPECIFIC PROTEAS... 53 9e-07
AT4G22285.1 | Symbols: | ubiquitin thiolesterase/ zinc ion bind... 52 2e-06
AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 52 2e-06
AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 52 2e-06
AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 52 2e-06
AT4G22350.1 | Symbols: | ubiquitin carboxyl-terminal hydrolase ... 52 2e-06
AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEAS... 51 3e-06
>AT5G22030.1 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8);
ubiquitin thiolesterase/ ubiquitin-specific protease |
chr5:7290155-7296344 REVERSE
Length = 913
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/927 (62%), Positives = 686/927 (74%), Gaps = 60/927 (6%)
Query: 3 NGLS--EDPSDSTQRPDSDN-DQRLYFVPYRWWKDAQDSTSLGESDGNKGILYIGTSGSS 59
NG S E P +TQR DS N +QR+YFVP RWWKDAQDS ES + ILY + GSS
Sbjct: 2 NGTSPDESPDSTTQRIDSFNGEQRVYFVPLRWWKDAQDSMP-SESVEKREILYTASCGSS 60
Query: 60 YAGPMKLINNIFSSDLVLNLRRGEEASQNGENGEVGVSGRDFALVSAEMWLKALKW---- 115
Y GPMKLINNIF+SD++ +LRR +A QNGE GE VSGRDFALVS++MWL+ALK
Sbjct: 61 YGGPMKLINNIFNSDILFDLRREGDALQNGETGEASVSGRDFALVSSDMWLQALKCIRSN 120
Query: 116 --------------------------HSDSKVASKYGKTFSAAEDDMSDVYPLQMRLSVQ 149
+ D K K K+FSA D DVYP+Q+RLSV
Sbjct: 121 DSFMEFFVFSASVHSLENEFLKKRLRYHDDKNTEKGVKSFSAGGVDRGDVYPVQLRLSVL 180
Query: 150 RELNSLGV-------KITKK-----DNSTELFRRACKIFTADSEALRIWDFSGQTTQFFV 197
+E NSL K+ K DNS E FRRACKIF+ DSE LRIWD SGQTT FF
Sbjct: 181 QETNSLAWSARLSFDKMIKNLNWILDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFFE 240
Query: 198 NDNKSPKDCQRQSDQEIVLELQVYGLSDNMKCREGKKDDATVQYSNGTHSSGTSTMMNGS 257
+D + KDCQ+Q+DQEI+LELQ+YGLSD++K +E KK+D + Q +NG + NG
Sbjct: 241 SDVSNSKDCQQQADQEILLELQIYGLSDSIKLKESKKEDGSTQQTNG--------ITNGM 292
Query: 258 AGXXXXXXXXXXXXXXXGKSGEAXXXXXXXXXXXXXXCFMNSAIQCLAHTPKLVDYFLGD 317
G GK+GEA CFMNS++QCLAHTPKLVD+FLG+
Sbjct: 293 NGGTVFRFGRSNSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGE 352
Query: 318 YGREINHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDS 377
Y +EIN DNPLGM GEIALAFGDLLR LWAPGAS VAPRTFK+KLARFAPQFSGFNQHDS
Sbjct: 353 YSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDS 412
Query: 378 QELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVARNDSIIVDVCQGQ 437
QELLAFLLDGLHEDLNRVK+KPYVEAKDG+GRPD EVADEYWRNHVARNDSIIVDVCQGQ
Sbjct: 413 QELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQ 472
Query: 438 YKSTLVCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQPSPYTISVPKYGK 497
YKSTLVCPICKKVSV FDPFMYLSLPLP T+ R+M LTV+S DGSS P P T++VPK+GK
Sbjct: 473 YKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGK 532
Query: 498 CEDLTRALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLNKDLD 557
EDL +AL ACSL +ETLLV EVYNNRIIR+LEEP DSL+LIRDGD+LV YRL KD +
Sbjct: 533 FEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRLKKDAN 592
Query: 558 NVPLVIFMHQHMDEQYINGKLTSSWKAFGIPLVAPVCNFQNGSDIRNLYIKLLTPFQKPS 617
N PL+++MHQ ++EQ+I+GK + +WKAFGIPLV+ +C+ +NGSD+ NLY+KLL+ F+ P+
Sbjct: 593 NSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVENGSDVENLYLKLLSSFKMPT 652
Query: 618 DGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSNSEVQFYLTDEKGTVK 677
+ + + + T D T+S N+ E + ++ YLTD++G
Sbjct: 653 EFFTENLENPTEEEATDKTDTDGTTSVEDTNSTDVK-ETTESLPDPVLRLYLTDDRGNSI 711
Query: 678 DSEIVMNEQLPVAGMPKRFNVLVCWPEKHIEQYETRLLNSLPEIFKSGFLAKRPQESVSL 737
++E++ ++ PV KR NVL WP K ++ Y+T LL+SLPE+ KSG KRPQESVSL
Sbjct: 712 EAEML--KEKPV-NKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKSG--TKRPQESVSL 766
Query: 738 YKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKNKL 797
+KCLEAFL EEPLGPDDMW+CP CK+HRQA KKLDLWRLPEILVIHLKRFSY+RFMKNKL
Sbjct: 767 FKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKL 826
Query: 798 EAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAFVHHGGDRWYDFD 857
EAYVDFP+D+LDLS+YISYKNGQ ++RYMLYAISNHYGSMGGGHYTA+VHHGGDRWYDFD
Sbjct: 827 EAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHHGGDRWYDFD 886
Query: 858 DSQVHPISQDKIKTSAAYVLFYRRVLE 884
DS VH ISQ+KIKTSAAYVLFY+R+++
Sbjct: 887 DSHVHQISQEKIKTSAAYVLFYKRLVD 913
>AT5G22030.2 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8);
ubiquitin thiolesterase/ ubiquitin-specific protease |
chr5:7290155-7296344 REVERSE
Length = 913
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/927 (62%), Positives = 686/927 (74%), Gaps = 60/927 (6%)
Query: 3 NGLS--EDPSDSTQRPDSDN-DQRLYFVPYRWWKDAQDSTSLGESDGNKGILYIGTSGSS 59
NG S E P +TQR DS N +QR+YFVP RWWKDAQDS ES + ILY + GSS
Sbjct: 2 NGTSPDESPDSTTQRIDSFNGEQRVYFVPLRWWKDAQDSMP-SESVEKREILYTASCGSS 60
Query: 60 YAGPMKLINNIFSSDLVLNLRRGEEASQNGENGEVGVSGRDFALVSAEMWLKALKW---- 115
Y GPMKLINNIF+SD++ +LRR +A QNGE GE VSGRDFALVS++MWL+ALK
Sbjct: 61 YGGPMKLINNIFNSDILFDLRREGDALQNGETGEASVSGRDFALVSSDMWLQALKCIRSN 120
Query: 116 --------------------------HSDSKVASKYGKTFSAAEDDMSDVYPLQMRLSVQ 149
+ D K K K+FSA D DVYP+Q+RLSV
Sbjct: 121 DSFMEFFVFSASVHSLENEFLKKRLRYHDDKNTEKGVKSFSAGGVDRGDVYPVQLRLSVL 180
Query: 150 RELNSLGV-------KITKK-----DNSTELFRRACKIFTADSEALRIWDFSGQTTQFFV 197
+E NSL K+ K DNS E FRRACKIF+ DSE LRIWD SGQTT FF
Sbjct: 181 QETNSLAWSARLSFDKMIKNLNWILDNSVECFRRACKIFSLDSEQLRIWDISGQTTLFFE 240
Query: 198 NDNKSPKDCQRQSDQEIVLELQVYGLSDNMKCREGKKDDATVQYSNGTHSSGTSTMMNGS 257
+D + KDCQ+Q+DQEI+LELQ+YGLSD++K +E KK+D + Q +NG + NG
Sbjct: 241 SDVSNSKDCQQQADQEILLELQIYGLSDSIKLKESKKEDGSTQQTNG--------ITNGM 292
Query: 258 AGXXXXXXXXXXXXXXXGKSGEAXXXXXXXXXXXXXXCFMNSAIQCLAHTPKLVDYFLGD 317
G GK+GEA CFMNS++QCLAHTPKLVD+FLG+
Sbjct: 293 NGGTVFRFGRSNSLSFLGKAGEAGTLGLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGE 352
Query: 318 YGREINHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDS 377
Y +EIN DNPLGM GEIALAFGDLLR LWAPGAS VAPRTFK+KLARFAPQFSGFNQHDS
Sbjct: 353 YSKEINLDNPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDS 412
Query: 378 QELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVARNDSIIVDVCQGQ 437
QELLAFLLDGLHEDLNRVK+KPYVEAKDG+GRPD EVADEYWRNHVARNDSIIVDVCQGQ
Sbjct: 413 QELLAFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQ 472
Query: 438 YKSTLVCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQPSPYTISVPKYGK 497
YKSTLVCPICKKVSV FDPFMYLSLPLP T+ R+M LTV+S DGSS P P T++VPK+GK
Sbjct: 473 YKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGK 532
Query: 498 CEDLTRALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLNKDLD 557
EDL +AL ACSL +ETLLV EVYNNRIIR+LEEP DSL+LIRDGD+LV YRL KD +
Sbjct: 533 FEDLHKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRLKKDAN 592
Query: 558 NVPLVIFMHQHMDEQYINGKLTSSWKAFGIPLVAPVCNFQNGSDIRNLYIKLLTPFQKPS 617
N PL+++MHQ ++EQ+I+GK + +WKAFGIPLV+ +C+ +NGSD+ NLY+KLL+ F+ P+
Sbjct: 593 NSPLIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRLCDVENGSDVENLYLKLLSSFKMPT 652
Query: 618 DGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSNSEVQFYLTDEKGTVK 677
+ + + + T D T+S N+ E + ++ YLTD++G
Sbjct: 653 EFFTENLENPTEEEATDKTDTDGTTSVEDTNSTDVK-ETTESLPDPVLRLYLTDDRGNSI 711
Query: 678 DSEIVMNEQLPVAGMPKRFNVLVCWPEKHIEQYETRLLNSLPEIFKSGFLAKRPQESVSL 737
++E++ ++ PV KR NVL WP K ++ Y+T LL+SLPE+ KSG KRPQESVSL
Sbjct: 712 EAEML--KEKPV-NKSKRLNVLARWPVKELDVYDTCLLSSLPEVSKSG--TKRPQESVSL 766
Query: 738 YKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKNKL 797
+KCLEAFL EEPLGPDDMW+CP CK+HRQA KKLDLWRLPEILVIHLKRFSY+RFMKNKL
Sbjct: 767 FKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKL 826
Query: 798 EAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAFVHHGGDRWYDFD 857
EAYVDFP+D+LDLS+YISYKNGQ ++RYMLYAISNHYGSMGGGHYTA+VHHGGDRWYDFD
Sbjct: 827 EAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVHHGGDRWYDFD 886
Query: 858 DSQVHPISQDKIKTSAAYVLFYRRVLE 884
DS VH ISQ+KIKTSAAYVLFY+R+++
Sbjct: 887 DSHVHQISQEKIKTSAAYVLFYKRLVD 913
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | UBP5
(UBIQUITIN-SPECIFIC PROTEASE 5); ubiquitin-specific
protease | chr2:17076714-17082192 REVERSE
Length = 924
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/887 (43%), Positives = 527/887 (59%), Gaps = 33/887 (3%)
Query: 24 LYFVPYRWWKD----AQDSTSLGESDGNKGILYIGTSGSSYAGPMKLINNIFSSDLVLNL 79
Y + RWW++ +DG+ + + GSS +K + I +SDL+ +
Sbjct: 41 FYLITQRWWQEWIEYVNQDQPCNTNDGSSLSEHCDSPGSS---TLKKPSRIDNSDLIYD- 96
Query: 80 RRGEEASQNGENGEVGVSGRDFALVSAEMWLKALKWHSDSKVASKYGKTFSAAEDDMS-D 138
E+ S E E GRD+ L+ E+W + W+ ++ + ++ +++ +
Sbjct: 97 SSLEDPSNTSEIIETLQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLSQTELAVE 156
Query: 139 VYPLQMRLSVQRELNSLGVKITKKDNSTELFRRACKIFTADSEALRIWDFSGQTTQFFVN 198
VYPL+++L + + + ++I+KK+ EL RRAC+IF DSE +RIWD+ G +N
Sbjct: 157 VYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQKYSLMN 216
Query: 199 D-NKSPKDCQRQSDQEIVLE-LQVYGLSDNMKCREGKKD-----DATVQYSNGTHSS--- 248
D +K+ D Q DQ+I++E L + G + + +++ D+T + SS
Sbjct: 217 DLDKTLDDANLQMDQDILVEVLDINGTLSSAHIQSAQENGLVDGDSTSILIEPSKSSLAA 276
Query: 249 --GTSTMMNG-SAGXXXXXXXXXXXXXXXGKSGEAXXXXXXXXXXXXXXCFMNSAIQCLA 305
G S+ N G G + CFMNSAIQCL
Sbjct: 277 AGGFSSSRNAFRTGSVEVSQSFDNTYSSTGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLV 336
Query: 306 HTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARF 365
HTP+ YF DY +EIN NPLGM GE+ALAFGDLLRKLWAPG +P+APR FK+KLARF
Sbjct: 337 HTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARF 396
Query: 366 APQFSGFNQHDSQELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVAR 425
APQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+ ++D +GRPDEEVADE+W+NH+AR
Sbjct: 397 APQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINSRDADGRPDEEVADEFWKNHIAR 456
Query: 426 NDSIIVDVCQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQP 485
NDSIIVDVCQGQYKSTLVCPIC KVSVTFDPFMYLSLPL TR++T+TV S D ++ P
Sbjct: 457 NDSIIVDVCQGQYKSTLVCPICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALP 516
Query: 486 SPYTISVPKYGKCEDLTRALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGD 545
S T++V K G+C DL +AL+ ACSL E L +AE+ NN I R E+P LS I+D D
Sbjct: 517 STITVNVSKQGRCRDLIQALTNACSLKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDD 576
Query: 546 RLVAYRLNKDLDNVPLVIFMHQHMDEQYINGKLTSSWKAFGIPLV--APVCNFQNGSDIR 603
L AY+L+K +N L+ + + D++ + T K G PL+ A + I
Sbjct: 577 HLAAYKLSKSSENTTLLRLVLRRRDQKAGERESTVQLKPCGTPLLSSASCGDALTKGKIH 636
Query: 604 NLYIKLLTPFQK-PSDGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSN 662
L +L+PF++ S G + D+ + +GG +++ +
Sbjct: 637 CLVQNMLSPFRREESVGKKGNSDSSIPERRSARFNNTEEEDKVGGLKKAKKSNSSDLGA- 695
Query: 663 SEVQFYLTDEKGTVKDSEIVMNEQLPVAGMPKRFNVLVC--WPEKHIEQYETRLLNSLPE 720
S++ L DE + + + + +P V + W + Y+ L SLPE
Sbjct: 696 SKLSLQLIDEDNKTIN---LPDNEAEAMKLPSSATVTIYLDWTPELSGMYDITCLESLPE 752
Query: 721 IFKSGFLAKRPQ-ESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEI 779
+ K G K+ + E +SLY CLEAFL+EEPL PD+MWFCP C + RQASKKLDLWRLPE+
Sbjct: 753 VLKYGPTTKKARSEPLSLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEV 812
Query: 780 LVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGG 839
LVIHLKRFSY+R MK+KLE +V+FP+ DLDL+ Y++ KN Y LYA++NHYG MG
Sbjct: 813 LVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGS 872
Query: 840 GHYTAFVHHGGD-RWYDFDDSQVHPISQDKIKTSAAYVLFYRRVLEA 885
GHYTA + D RWY+FDDS + I++D +K+ AAYVLFYRR +A
Sbjct: 873 GHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRRKSDA 919
>AT4G10570.1 | Symbols: UBP9 | UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9);
cysteine-type endopeptidase/ ubiquitin thiolesterase |
chr4:6523657-6528058 REVERSE
Length = 923
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/904 (43%), Positives = 535/904 (59%), Gaps = 73/904 (8%)
Query: 12 STQRPDSDNDQRLYFV-PYRWWKDAQDSTSLGESDGNKGILYIGTSGSSYAGPMKLINNI 70
+++ D+ LYFV RW+ Q+ ++ + G +S + GP+ ++I
Sbjct: 32 TSESEDNLKQGNLYFVISKRWYTSWQEYVENSANECSTG----ESSEAPRPGPID-NHDI 86
Query: 71 FSSDLVLN---LRRGEEASQNGENGEVGVSGRDFALVSAEMWLKALKWHSDSKVASK--- 124
SD +N LRR + V G D+ LV ++W + ++W+S +
Sbjct: 87 IESDSDINDPQLRR------------LLVEGEDYVLVPKQVWKRLVEWYSGGPPIERKLI 134
Query: 125 ----YGKTFSAAEDDMSDVYPLQMRLSVQRELNSLGVKITKKDNSTELFRRACKIFTADS 180
Y +++S +VYPL + L+ R+ + +++ K+ + EL+ + C +
Sbjct: 135 CQGFYTRSYSV------EVYPLCLMLTDGRDESRTVIRLGKQASIRELYEKVCAMTGVPQ 188
Query: 181 EALRIWDFSGQTTQFFVN--DNKSPKDCQRQSDQEIVLELQVYGLSDNMKCREGKKDDAT 238
E IWD+ + ++ KS ++ DQ+I++E+ S + A
Sbjct: 189 EKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEVDGLSSSSQSAMSSTGNELAL 248
Query: 239 VQYSNG---THSSGTSTMMNGSAGXXXXXXXXXXXXXXXGKS-----GEAXXXXXXXXXX 290
V +G T+ NG + G+ G+
Sbjct: 249 VPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGRDSLSILGKGEKGGLAGLSN 308
Query: 291 XXXXCFMNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDLLRKLWAPGA 350
CFMNSA+QCLAHTP +V+YFL DY +IN DNPLGM GE+A+AFGDLL+KLW+ G
Sbjct: 309 LGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGR 368
Query: 351 SPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRP 410
+ VAPR FK+KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLN+VK KPY+E KD + RP
Sbjct: 369 NAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYIELKDSDSRP 428
Query: 411 DEEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPSTNTR 470
D+EVA+E W H ARNDS+IVDVCQGQYKSTLVCP+C K+S+TFDPFMYLS+PLPST TR
Sbjct: 429 DDEVAEELWNYHKARNDSVIVDVCQGQYKSTLVCPVCGKISITFDPFMYLSVPLPSTLTR 488
Query: 471 SMTLTVVSTDGSSQPSPYTISVPKYGKCEDLTRALSLACSLGIDETLLVAEVYNNRIIRY 530
SMT+TV DGS P PYT+ VPK G DL AL AC L DE+LL+AEVY+++I RY
Sbjct: 489 SMTITVFYCDGSRLPMPYTVIVPKQGSIRDLITALGTACCLAEDESLLLAEVYDHKIFRY 548
Query: 531 LEEPADSLSLIRDGDRLVAYRLN---KDLDNVPLVIFMHQHMDEQYINGKLTSSWKAFGI 587
E P DSLS I+D + +VAYRLN K L I +H + ++ S K FG
Sbjct: 549 FEIPLDSLSAIKDDEHIVAYRLNQIPKGSRKAKLEI-LHGGQERAVLDSVRGSDVKLFGT 607
Query: 588 PLVAPV-CNFQNGSDIRNLYIKLLTPFQK---PSD-GTLSSCDTLSSTAVEVVTGMDDTS 642
P V V +G+DI + L+P K PS S L+ V+ +G+ +
Sbjct: 608 PFVTYVNTEPLSGTDIDAVISGFLSPLHKVHAPSKIHNGSDNGHLADATVDQASGILSSP 667
Query: 643 SALGGNADPSSVEGANISSNSEVQF--YLTDEKGTVKDSEIVMNEQLPVAGMPKRFNVLV 700
NA S+ E+ F +LTDE+G + + + +E G R VLV
Sbjct: 668 DTEIDNA-----------SDRELSFRIFLTDERGL--NIKPLQSESSISPGTVTR--VLV 712
Query: 701 CWPEKHIEQYETRLLNSLPEIFKSGFLAKRP-QESVSLYKCLEAFLKEEPLGPDDMWFCP 759
W E E+Y++ L+ LPE+ K+ F AK+ QES+SL+ CLEAFL EEPLGPDDMWFCP
Sbjct: 713 EWNEGEHERYDSSYLSDLPEVHKTSFSAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCP 772
Query: 760 SCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSTYISYKNG 819
SCK+HRQA+KKLDLW+LP+ILV HLKRF+Y+R++KNK++ +V+FPV DLDLS Y+ KNG
Sbjct: 773 SCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNG 832
Query: 820 QLSHRYMLYAISNHYGSMGGGHYTAFVHHGGD-RWYDFDDSQVHPISQDKIKTSAAYVLF 878
Q S+ Y LYA+SNHYG +GGGHYTA+ D +WY FDDS V +++ +I+ SAAYVLF
Sbjct: 833 Q-SYLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLF 891
Query: 879 YRRV 882
YRRV
Sbjct: 892 YRRV 895
>AT4G10590.1 | Symbols: UBP10 | ubiquitin carboxyl-terminal
hydrolase family protein | chr4:6538919-6543272 REVERSE
Length = 910
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/818 (46%), Positives = 500/818 (61%), Gaps = 65/818 (7%)
Query: 100 DFALVSAEMWLKALKWHSDSKVASK-------YGKTFSAAEDDMSDVYPLQMRLSVQREL 152
D+ LV E+W + ++W+S + Y +++S +VYPL + L+ R+
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSV------EVYPLCLMLTDGRDE 160
Query: 153 NSLGVKITKKDNSTELFRRACKIFTADSEALRIWDFSGQTTQFFVND--NKSPKDCQRQS 210
+ +++ K+ + EL+ + C + E IWD+ + ++ KS ++
Sbjct: 161 SRTVIRLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHM 220
Query: 211 DQEIVLELQVYGLSDNMKCREGKKDDATVQYSNGTHS---SGTSTMMNGSAGXXXXXXXX 267
DQ+I+LE+ S + G + A V S +G T+ NG +
Sbjct: 221 DQDILLEVDGSSSSQSAMSSTGN-ELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFP 279
Query: 268 XXXXXXXGKS-----GEAXXXXXXXXXXXXXXCFMNSAIQCLAHTPKLVDYFLGDYGREI 322
G + G+ CFMNSA+QCLAHTP +V+YFL DY +I
Sbjct: 280 RITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDI 339
Query: 323 NHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLA 382
N DNPLGM GE+A+AFGDLL+KLW+ G + VAPR FK+KLARFAPQFSG+NQHDSQELLA
Sbjct: 340 NRDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLA 399
Query: 383 FLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVARNDSIIVDVCQGQYKSTL 442
FLLDGLHEDLN+VK KPY+E KD + RPD+EVA+E W H ARNDS+IVDVCQGQYKSTL
Sbjct: 400 FLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTL 459
Query: 443 VCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQPSPYTISVPKYGKCEDLT 502
VCP C K+S+TFDPFMYLS+PLPST TRSMT+TV DGS P PYT+ VPK G DL
Sbjct: 460 VCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLI 519
Query: 503 RALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLN---KDLDNV 559
AL AC L DE+LL+AEVY+++I +Y E P DSLS I+D + +VAYRLN K
Sbjct: 520 TALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKA 579
Query: 560 PLVIFMHQHMDEQYINGKLTSSWKAFGIPLVAPV-CNFQNGSDIRNLYIKLLTPFQK--- 615
L I +H + K FG P V V +G+DI + + L+P K
Sbjct: 580 KLEI-LHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHA 638
Query: 616 PS-------DGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSNSEVQF- 667
PS +G L D A E+++ D + ++ A S+ E+ F
Sbjct: 639 PSKIHNGSENGHLP--DATVDEASEILSSPD------------TEIDDA---SDRELSFR 681
Query: 668 -YLTDEKGTVKDSEIVMNEQLPVAGMPKRFNVLVCWPEKHIEQYETRLLNSLPEIFKSGF 726
+LTDE+G + + + +E G+ R VLV W E E+Y++ L+ LPE+ K+ F
Sbjct: 682 IFLTDERGL--NFKPLQSESSISLGIATR--VLVEWNEGEHERYDSSYLSDLPEVHKTSF 737
Query: 727 LAKRP-QESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLK 785
AK+ QES+SL+ CLEAFL EEPLGPDDMWFCPSCK+HRQA+KKLDLW+LP+ILV HLK
Sbjct: 738 SAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLK 797
Query: 786 RFSYTRFMKNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAF 845
RF+Y+R++KNK++ +V+FPV DLDLS Y+ KN Q S+ Y LYA+SNHYG +GGGHYTA+
Sbjct: 798 RFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQ-SYLYELYAVSNHYGGLGGGHYTAY 856
Query: 846 VHHGGD-RWYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
D WY FDDS V +++ +IK SAAYVLFYRRV
Sbjct: 857 AKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
>AT4G10590.2 | Symbols: UBP10 | ubiquitin carboxyl-terminal
hydrolase family protein | chr4:6538919-6543272 REVERSE
Length = 910
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/818 (46%), Positives = 500/818 (61%), Gaps = 65/818 (7%)
Query: 100 DFALVSAEMWLKALKWHSDSKVASK-------YGKTFSAAEDDMSDVYPLQMRLSVQREL 152
D+ LV E+W + ++W+S + Y +++S +VYPL + L+ R+
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSV------EVYPLCLMLTDGRDE 160
Query: 153 NSLGVKITKKDNSTELFRRACKIFTADSEALRIWDFSGQTTQFFVND--NKSPKDCQRQS 210
+ +++ K+ + EL+ + C + E IWD+ + ++ KS ++
Sbjct: 161 SRTVIRLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHM 220
Query: 211 DQEIVLELQVYGLSDNMKCREGKKDDATVQYSNGTHS---SGTSTMMNGSAGXXXXXXXX 267
DQ+I+LE+ S + G + A V S +G T+ NG +
Sbjct: 221 DQDILLEVDGSSSSQSAMSSTGN-ELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFP 279
Query: 268 XXXXXXXGKS-----GEAXXXXXXXXXXXXXXCFMNSAIQCLAHTPKLVDYFLGDYGREI 322
G + G+ CFMNSA+QCLAHTP +V+YFL DY +I
Sbjct: 280 RITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDI 339
Query: 323 NHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDSQELLA 382
N DNPLGM GE+A+AFGDLL+KLW+ G + VAPR FK+KLARFAPQFSG+NQHDSQELLA
Sbjct: 340 NRDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLA 399
Query: 383 FLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVARNDSIIVDVCQGQYKSTL 442
FLLDGLHEDLN+VK KPY+E KD + RPD+EVA+E W H ARNDS+IVDVCQGQYKSTL
Sbjct: 400 FLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTL 459
Query: 443 VCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQPSPYTISVPKYGKCEDLT 502
VCP C K+S+TFDPFMYLS+PLPST TRSMT+TV DGS P PYT+ VPK G DL
Sbjct: 460 VCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLI 519
Query: 503 RALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLN---KDLDNV 559
AL AC L DE+LL+AEVY+++I +Y E P DSLS I+D + +VAYRLN K
Sbjct: 520 TALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKA 579
Query: 560 PLVIFMHQHMDEQYINGKLTSSWKAFGIPLVAPV-CNFQNGSDIRNLYIKLLTPFQK--- 615
L I +H + K FG P V V +G+DI + + L+P K
Sbjct: 580 KLEI-LHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHA 638
Query: 616 PS-------DGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSNSEVQF- 667
PS +G L D A E+++ D + ++ A S+ E+ F
Sbjct: 639 PSKIHNGSENGHLP--DATVDEASEILSSPD------------TEIDDA---SDRELSFR 681
Query: 668 -YLTDEKGTVKDSEIVMNEQLPVAGMPKRFNVLVCWPEKHIEQYETRLLNSLPEIFKSGF 726
+LTDE+G + + + +E G+ R VLV W E E+Y++ L+ LPE+ K+ F
Sbjct: 682 IFLTDERGL--NFKPLQSESSISLGIATR--VLVEWNEGEHERYDSSYLSDLPEVHKTSF 737
Query: 727 LAKRP-QESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLK 785
AK+ QES+SL+ CLEAFL EEPLGPDDMWFCPSCK+HRQA+KKLDLW+LP+ILV HLK
Sbjct: 738 SAKKTRQESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLK 797
Query: 786 RFSYTRFMKNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAF 845
RF+Y+R++KNK++ +V+FPV DLDLS Y+ KN Q S+ Y LYA+SNHYG +GGGHYTA+
Sbjct: 798 RFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQ-SYLYELYAVSNHYGGLGGGHYTAY 856
Query: 846 VHHGGD-RWYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
D WY FDDS V +++ +IK SAAYVLFYRRV
Sbjct: 857 AKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
>AT1G32850.1 | Symbols: UBP11 | UBP11 (UBIQUITIN-SPECIFIC PROTEASE
11); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr1:11902629-11906900 FORWARD
Length = 892
Score = 627 bits (1617), Expect = e-179, Method: Compositional matrix adjust.
Identities = 363/810 (44%), Positives = 495/810 (61%), Gaps = 57/810 (7%)
Query: 98 GRDFALVSAEMWLKALKWHSDS-----KVASK--YGKTFSAAEDDMSDVYPLQMRLSVQR 150
G D+ LV E+W K +KW+ K+ S+ Y K+FS +VY L + L+ R
Sbjct: 103 GVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSV------EVYLLCLTLTDSR 156
Query: 151 ELNSLGVKITKKDNSTELFRRACKIFTADSEALRIWDFSGQTTQFFVN--DNKSPKDCQR 208
+ ++ ++++K+ + +L+ C E RIWD+ + ++ +S ++
Sbjct: 157 DESTTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGL 216
Query: 209 QSDQEIVLELQ-------VYGLSDN---MKCREGKKDDAT-VQYSNGTHSSGTSTMMNGS 257
Q +Q+I+LE+ V L++N M E + DA + GT S+G S S
Sbjct: 217 QFNQDILLEVDGSASSQFVMSLAENELAMVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFS 276
Query: 258 AGXXXXXXXXXXXXXXXGKSGEAXXXXXXXXXXXXXXCFMNSAIQCLAHTPKLVDYFLGD 317
G+ CFMNS +QCLAHTP +V+YFL D
Sbjct: 277 FFGRNTFKDDVSSRTF----GKGEKRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQD 332
Query: 318 YGREINHDNPLGMDGEIALAFGDLLRKLWAPGASPVAPRTFKSKLARFAPQFSGFNQHDS 377
Y +IN NPLGM GE+A+AFG+LLRKLW+ G + VAPR FK+KLARFAPQFSG+NQHDS
Sbjct: 333 YRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDS 392
Query: 378 QELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRPDEEVADEYWRNHVARNDSIIVDVCQGQ 437
QE+LAFLLDGLHEDLN+VK KPY+EAKD +GRPD+EVA+E W+ H ARNDS+IVDV QGQ
Sbjct: 393 QEMLAFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQ 452
Query: 438 YKSTLVCPICKKVSVTFDPFMYLSLPLPSTNTRSMTLTVVSTDGSSQPSPYTISVPKYGK 497
YKSTLVCP C K+S+TFDPFMYLSLPLPS+ TRSMT+TV DGS P PYT++VPK G
Sbjct: 453 YKSTLVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGS 512
Query: 498 CEDLTRALSLACSLGIDETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYR---LNK 554
C DL+ AL AC L DE+LL+AEVY++++ +Y E P + L+ I+D + +VAYR ++K
Sbjct: 513 CRDLSNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHK 572
Query: 555 DLDNVPLVIFMHQHMDEQYINGKLTSSWKAFGIPLVAPVCNFQ-NGSDIRNLYIKLLTPF 613
V L I +H ++ G K FG PLV + +G+DI LL+P
Sbjct: 573 GPGKVKLEI-LHGEQEKSSDRGP-----KCFGTPLVTYINKEPLSGTDIATSISGLLSPL 626
Query: 614 QKPSDGTLSSCDTLSSTAVEVVTGMDDTSSALGGNADPSSVEGANISSNSEVQFYLTDEK 673
++ SC S V D++S ++ + +S + +Y + +
Sbjct: 627 RR----VHMSCVVNSGNENGHVP--DESSRSILSRDTETEDNDRELSLSLLRDYYSFNLQ 680
Query: 674 GTVKDSEIVMNEQLPVAGMPKRFNVLVCWPEKHIEQYETRLLNSLPEIFKSGFLAKRPQE 733
DS V VLV W EK E+Y++ LN LP++ K+ K QE
Sbjct: 681 PLESDS---------VVNPGSVTKVLVKWNEKEHEKYDSSYLNDLPKVHKNVLAKKTMQE 731
Query: 734 SVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFM 793
+SL+ CLEAFL EEPLGPDDMW+CP CK+HRQA+KKLDLW+LP+ILV HLKRF+Y+R+
Sbjct: 732 GISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYF 791
Query: 794 KNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGGGHYTAFVHHGGD-R 852
KNK++ V+F + DLDLS Y+ ++GQ S+ Y LYAISNHYG +GGGHYTA+ + +
Sbjct: 792 KNKIDTLVNFHIHDLDLSKYVKNEDGQ-SYLYELYAISNHYGGLGGGHYTAYAKLMDETK 850
Query: 853 WYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
WY+FDDS+V +++ +IKTSAAYVLFY+RV
Sbjct: 851 WYNFDDSRVSAVNESEIKTSAAYVLFYQRV 880
>AT5G46740.1 | Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEASE
21); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:18965410-18968492 REVERSE
Length = 732
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 88/148 (59%), Gaps = 5/148 (3%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKN 795
+L+K LE+F E L +D C +CK+ K+L +LP + HLKRF+
Sbjct: 324 TLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTME 381
Query: 796 KLEAYVDFPVDDLDLSTYISYK-NGQLSHRYMLYAISNHYGSMGG-GHYTAFVHHGGDRW 853
K+ +++FP++ LDLS ++S + ++S RY LYA H G GHY+++V + W
Sbjct: 382 KIFDHIEFPLE-LDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETW 440
Query: 854 YDFDDSQVHPISQDKIKTSAAYVLFYRR 881
++FDDS+V IS++++ + AY+LFY R
Sbjct: 441 HNFDDSKVTRISEERVLSRPAYILFYAR 468
>AT4G31670.1 | Symbols: UBP18 | UBP18 (UBIQUITIN-SPECIFIC PROTEASE
18); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr4:15336007-15339506 REVERSE
Length = 631
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKN 795
SL +CL+ F EE L D+M+ C C + +A K+L + R P IL I LKR+ R+
Sbjct: 329 SLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--G 386
Query: 796 KLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGG---GHYTAFVHHGGDR 852
KL + FP + LDL+ Y+S + G S Y LYA+ H + GHY ++
Sbjct: 387 KLNKRISFP-ETLDLNPYMS-EGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGN 444
Query: 853 WYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
WY DDS++ + + + + AY+L Y R+
Sbjct: 445 WYRIDDSEIESVELEDVLSQRAYMLLYSRI 474
>AT1G17110.1 | Symbols: UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEASE
15); ubiquitin-specific protease | chr1:5845816-5849889
REVERSE
Length = 924
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKN 795
SL L F + E L ++M+ C C + +A K+L + P IL I LKRF R+
Sbjct: 599 SLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRY--G 656
Query: 796 KLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGG---GHYTAFVHHGGDR 852
K+ + FP + LD+ +++ + G + YMLYA+ H ++ GHY ++V
Sbjct: 657 KINKCISFP-EMLDMIPFMT-RTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGN 714
Query: 853 WYDFDDSQVHPISQDKIKTSAAYVLFYRR 881
WY DDS++HP+ ++ + AY+LFY R
Sbjct: 715 WYRIDDSEIHPVPMTQVMSEGAYMLFYMR 743
>AT2G24640.1 | Symbols: UBP19 | UBP19 (UBIQUITIN-SPECIFIC PROTEASE
19); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr2:10475613-10479341 REVERSE
Length = 672
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 733 ESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRF 792
++VSL +CL+ F +E L D+++ C C + +A K+L + P IL I LKRF RF
Sbjct: 332 DAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRF 391
Query: 793 MKNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGG---GHYTAFVHHG 849
KL + FP + DL Y+S G+ S Y LYA+ H + GHY +V
Sbjct: 392 --GKLNKRISFP-ETFDLGPYMS-GGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDF 447
Query: 850 GDRWYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
WY DDS+V + + + + AY+L Y RV
Sbjct: 448 RGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRV 480
>AT4G17895.1 | Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEASE
20); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:9939914-9942698 FORWARD
Length = 695
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 5/148 (3%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKN 795
+L LE+F + E L D+ C +C + K+L L +LP + HLKRF
Sbjct: 331 TLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYME 388
Query: 796 KLEAYVDFPVDDLDLSTYI-SYKNGQLSHRYMLYAISNHYG-SMGGGHYTAFVHHGGDRW 853
K+ +V P++ +DL Y+ + + ++S +Y LYA+ H+G S+ GHY+++V W
Sbjct: 389 KIYKHVKIPLE-IDLQPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIW 447
Query: 854 YDFDDSQVHPISQDKIKTSAAYVLFYRR 881
+ FDDS+V I +D + + +Y+LFY R
Sbjct: 448 HHFDDSKVTRIDEDMVLSQDSYILFYAR 475
>AT4G24560.1 | Symbols: UBP16 | UBP16 (UBIQUITIN-SPECIFIC PROTEASE
16); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr4:12679493-12684528
REVERSE
Length = 1008
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 741 LEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAY 800
L F + E L ++ + C SCK + +A KKL + P +L I LKRF +F KL
Sbjct: 708 LRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF--GKLNKL 765
Query: 801 VDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMGG---GHYTAFVHHGGDRWYDFD 857
+ FP + LDL+ Y+S + SH Y LY + H M GHY ++ + ++WY D
Sbjct: 766 IRFP-ETLDLAPYVS-GGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKWYKAD 822
Query: 858 DSQVHPISQDKIKTSAAYVLFYRR 881
DS V ++I T AY+LFY R
Sbjct: 823 DSTVVTSDVERILTKGAYMLFYAR 846
>AT5G10790.1 | Symbols: UBP22 | UBP22 (UBIQUITIN-SPECIFIC PROTEASE
22); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr5:3410638-3412559
FORWARD
Length = 557
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 27/169 (15%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRF--SYTRFM 793
+L CL+ F + E LGPD C SC + R++SK++ + RLP +L +H+KRF S TR
Sbjct: 362 TLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKT 421
Query: 794 KNKLEAYVDFPVDDLDLSTYIS-------YKNGQLSH----------------RYMLYAI 830
K+++Y+ +P L++S Y+S + N + + ++A+
Sbjct: 422 SRKIDSYLQYPF-RLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAV 480
Query: 831 SNHYGSMGGGHYTAFVHHGGDRWYDFDDSQVHPISQDKIKTSAAYVLFY 879
H G + GHY ++ G WY DD+ ++ + ++ ++ Y+LFY
Sbjct: 481 VTHKGMLESGHYVTYLRLKG-LWYRCDDAWINEVEEEVVRGCECYMLFY 528
>AT5G57990.1 | Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEASE
23); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:23470218-23473997 REVERSE
Length = 859
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 736 SLYKCLEAFLKEEPL-GPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMK 794
SL + L F E L ++ C CK+ +A K+L + + P +L +HLKRF R
Sbjct: 266 SLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHR--S 323
Query: 795 NKLEAYVDFPVDDLDLSTYISYKN-GQLSHRYMLYAISNHYG-SMGGGHYTAFVHHGGDR 852
K++ VDF +D+ ++S + G L +Y LY + HYG S GHY FV
Sbjct: 324 EKIDRKVDF-TSAIDMKPFVSGPHEGNL--KYTLYGVLVHYGRSSHSGHYACFVRTSSGM 380
Query: 853 WYDFDDSQVHPISQDKIKTSAAYVLFYRR 881
WY DD++V +S+ + AY+LFY R
Sbjct: 381 WYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
>AT5G65450.1 | Symbols: UBP17 | UBP17 (UBIQUITIN-SPECIFIC PROTEASE
17); cysteine-type endopeptidase/ ubiquitin
thiolesterase/ zinc ion binding | chr5:26157863-26161096
FORWARD
Length = 731
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRFMKN 795
SL + L F E L ++ +FC CK +++A KKL + P IL + LKRF F
Sbjct: 487 SLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNF--G 544
Query: 796 KLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSMG---GGHYTAFVHHGGDR 852
KL + FP + LD+S Y+S N Y LYA+ H +M GHY ++
Sbjct: 545 KLSKPIHFP-ELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGD 603
Query: 853 WYDFDDSQVHPISQDKIKTSAAYVLFYRR 881
W+ DDS V P+ + + AY+L Y R
Sbjct: 604 WFKIDDSNVFPVQLETVLLEGAYMLLYAR 632
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | UBP2 (UBIQUITIN-SPECIFIC
PROTEASE 2); ubiquitin-specific protease |
chr1:1369306-1372290 REVERSE
Length = 961
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 14/131 (10%)
Query: 765 RQASKKLDLWRLPEILVIHLKRFSYT-RFMKNKLEAYVDFPVDDLDLSTYISYK-NGQLS 822
R A+KK+ + + P +L IHLKRFS R +KL +V F + +DL Y+ + +G+
Sbjct: 830 RDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFK-EVIDLRQYMDSRCSGEDP 888
Query: 823 HRYMLYAISNHYGSMGGGHYTAFVHHGGDR----------WYDFDDSQVHPISQDKIKTS 872
Y L + H G+M GGHY A+V GG R WY+ D+ V +S +K+ S
Sbjct: 889 PVYRLAGLVEHSGTMRGGHYVAYVR-GGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHS 947
Query: 873 AAYVLFYRRVL 883
AY+LFY R+
Sbjct: 948 EAYILFYERIF 958
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 36/174 (20%)
Query: 295 CFMNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDLLRKLWA---PGA- 350
CF NS +Q L +L D+FL + G G+ G +A + LRKL+ P A
Sbjct: 240 CFFNSIMQNLLSLDRLRDHFLKENGS--------GVGGPLASS----LRKLFTETKPEAG 287
Query: 351 --SPVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKSKPYVEAKDGEG 408
S + PR F APQF G++QHDS ELL LLD L + + ++ K V D
Sbjct: 288 LKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDND--- 344
Query: 409 RPDEEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVTFDPFMYLSL 462
++ ++I V G+ S + C C S ++PF+ LSL
Sbjct: 345 ---------------EKSTTLIESVFGGETSSIVSCMECGHSSKVYEPFLDLSL 383
>AT4G30890.2 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEASE
24); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:15036383-15038825 REVERSE
Length = 551
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPVD-DLDLSTYISYKNGQLSHRY 825
ASK + + +L +I+++HL RFSY KL V FP++ +L+ S +S N L RY
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESL--RY 493
Query: 826 MLYAISNHYG-SMGGGHYTAFVHHGGDRWYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
L A H+G GHYT +W FDD+ V PI + AYVLFY++V
Sbjct: 494 ELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEASE
24); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:15036383-15038825 REVERSE
Length = 551
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPVD-DLDLSTYISYKNGQLSHRY 825
ASK + + +L +I+++HL RFSY KL V FP++ +L+ S +S N L RY
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESL--RY 493
Query: 826 MLYAISNHYG-SMGGGHYTAFVHHGGDRWYDFDDSQVHPISQDKIKTSAAYVLFYRRV 882
L A H+G GHYT +W FDD+ V PI + AYVLFY++V
Sbjct: 494 ELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | UBP1 (UBIQUITIN-SPECIFIC
PROTEASE 1); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr2:13898431-13901870
REVERSE
Length = 1083
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 765 RQASKKLDLWRLPEILVIHLKRFSY-TRFMKNKLEAYVDFPVDDLDLSTYISYKNGQLSH 823
R A KK+ + + P +L IHLKRFS R +KL +VDF + +DLS Y+ + +
Sbjct: 952 RDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQ-EFIDLSKYMDTRCSEEDE 1010
Query: 824 R-YMLYAISNHYGSMGGGHYTAFVHHGGDR-------------WYDFDDSQVHPISQDKI 869
Y L + H G+M GHY +++ G WY DSQV P S +++
Sbjct: 1011 PVYRLAGLVEHLGAMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 870 KTSAAYVLFYRRV 882
S AY+LFY R+
Sbjct: 1071 LRSEAYILFYERI 1083
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 295 CFMNSAIQCLAHTPKLVDYFLGDYGREINHDNPLGMDGEIALAFGDLLRKLWAPGA---S 351
CF NS +Q L +L ++FL + L + G + + +L + + + +
Sbjct: 211 CFFNSVMQNLLSLDQLREHFLKE---------DLSVSGPLVSSLKELFAESNSEASVFRN 261
Query: 352 PVAPRTFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKSKPYVEAKDGEGRPD 411
+ PR + APQF G+ QHDS ELL LLDGL + + ++ K G D
Sbjct: 262 EINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKKL--------GVSD 313
Query: 412 EEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPS 466
+ Y + ++I V G+ ST+ C C S ++PFM LSLP+PS
Sbjct: 314 SNDSSTYQK------PTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPVPS 362
>AT3G14400.1 | Symbols: UBP25 | UBP25 (UBIQUITIN-SPECIFIC PROTEASE
25); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr3:4811953-4815210 REVERSE
Length = 661
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 733 ESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTRF 792
+S S+ + L+ F + E L ++ + C SC+K A K++ + + P ILVI LKRF
Sbjct: 188 QSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGG--I 245
Query: 793 MKNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYG-SMGGGHYTAFVHHGGD 851
K++ + F + L LS ++S + Y L+ I H G S GHY A+V
Sbjct: 246 FGGKIDKAISFG-EILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVKDSLG 304
Query: 852 RWYDFDDSQVHPISQDKIKTSAAYVLFYRR 881
RWY +DS V + ++ + AY+LF+ R
Sbjct: 305 RWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ATUBP3 (ARABIDOPSIS THALIANA
UBIQUITIN-SPECIFIC PROTEASE 3); ubiquitin-specific
protease | chr4:18511858-18514139 REVERSE
Length = 371
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 732 QESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTR 791
+++ S+ CL+ F E L +D +FC C ++A K++ + + P ILVIHLKRF Y
Sbjct: 207 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIE 266
Query: 792 FM--KNKLEAYVDFPVDDLDLSTYIS-YKNGQLSHRYMLYAISNHYGSM-GGGHYTAFVH 847
+ KL V FP+ +L LS + Y + + Y L+A+ H GS GHY + V
Sbjct: 267 QLGRYKKLSYRVVFPL-ELKLSNTVEPYADVE----YSLFAVVVHVGSGPNHGHYVSLV- 320
Query: 848 HGGDRWYDFDDSQVHPISQDKIK------------TSAAYVLFY 879
+ W FDD V I + ++ T Y+LFY
Sbjct: 321 KSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFY 364
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ATUBP4 (ARABIDOPSIS THALIANA
UBIQUITIN-SPECIFIC PROTEASE 4); ubiquitin-specific
protease | chr2:9476733-9478825 REVERSE
Length = 365
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 732 QESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKRFSYTR 791
+++ S+ CL+ F E L +D +FC C ++A K++ + + P ILVIHLKRF Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 792 FMK--NKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGSM-GGGHYTAFVHH 848
+ KL V FP+ +L LS + + + Y L+A+ H GS GHY + V
Sbjct: 262 QLGRYKKLSYRVVFPL-ELKLSNTV---DEYVDIEYSLFAVVVHVGSGPNHGHYVSLV-K 316
Query: 849 GGDRWYDFDDSQVHPISQDKIKT 871
+ W FDD V I + ++T
Sbjct: 317 SHNHWLFFDDESVEIIEESAVQT 339
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | UBP26
(UBIQUITIN-SPECIFIC PROTEASE 26); ubiquitin
thiolesterase/ ubiquitin-specific protease |
chr3:18380942-18386662 REVERSE
Length = 1067
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 736 SLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLPEILVIHLKR--FSYTRFM 793
SL L +L E L D+ +FC SC A++ + L LP ++ LKR F
Sbjct: 253 SLDASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTA 312
Query: 794 KNKLEAYVDFPVDDLDLSTYISYKNGQLSHRYMLYAISNHYGS-MGGGHYTAFVH-HGGD 851
K K+ + FP LD+ + ++ ++ Q Y L A+ H GS + GHY A +
Sbjct: 313 KKKITSSFSFP-QVLDMGSRLA-ESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTG 370
Query: 852 RWYDFDDSQVHPISQ 866
W++FDD V + +
Sbjct: 371 LWWEFDDEHVSELGK 385
>AT4G39370.1 | Symbols: UBP27 | UBP27 (UBIQUITIN-SPECIFIC PROTEASE
27); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:18306392-18308625 FORWARD
Length = 494
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 31/145 (21%)
Query: 769 KKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPV-----------------DDLDLS 811
K+L + R P++L I ++R S+ F + KL ++ FP+ + +++S
Sbjct: 350 KQLIIARFPKLLCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSSIGVNIEERIEMS 409
Query: 812 TYISYKNGQLSH-RYMLYAISNHYGSMGGGHYTAF-------------VHHGGDRWYDFD 857
+ +H Y L + H+G G GHYT + W+
Sbjct: 410 SEYQKPEASKNHGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEEDCDEDLSWFSIS 469
Query: 858 DSQVHPISQDKIKTSAAYVLFYRRV 882
DS+V +S+ + + A +LFY R+
Sbjct: 470 DSEVCRVSESDVLGAEASLLFYERL 494
>AT4G22285.1 | Symbols: | ubiquitin thiolesterase/ zinc ion binding
| chr4:11779063-11781898 REVERSE
Length = 541
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSTYI-----SYKNGQL 821
A + + + P L+ H+ RF F K K V+FPV D++L YI + + +
Sbjct: 418 ARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENV 477
Query: 822 SHRYMLYAISNHYGSMGGGHYTAFVHHGGDR-WYDFDDSQVHPISQDKIKTSAAYVLFY 879
+Y L A H G G++ FV WY+ D V ++ S AY+ Y
Sbjct: 478 CSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIY 536
>AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2019545-2027834 REVERSE
Length = 1116
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKN---KLEAYVDFPVD-DLDLS--TYISY-KNG 819
A K + P +L + LKRF Y FM++ K+ +FP++ DLD Y+S +
Sbjct: 375 AKKGVLFIDFPPVLQLQLKRFEYD-FMRDTMVKINDRYEFPLELDLDREDGKYLSPDADR 433
Query: 820 QLSHRYMLYAISNHYGSMGGGHYTAFVHHG-GDRWYDFDDSQV 861
+ + Y L+++ H G + GGHY AF+ D+WY FDD +V
Sbjct: 434 SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERV 476
>AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2020682-2027834 REVERSE
Length = 985
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKN---KLEAYVDFPVD-DLDLS--TYISY-KNG 819
A K + P +L + LKRF Y FM++ K+ +FP++ DLD Y+S +
Sbjct: 375 AKKGVLFIDFPPVLQLQLKRFEYD-FMRDTMVKINDRYEFPLELDLDREDGKYLSPDADR 433
Query: 820 QLSHRYMLYAISNHYGSMGGGHYTAFVHHG-GDRWYDFDDSQV 861
+ + Y L+++ H G + GGHY AF+ D+WY FDD +V
Sbjct: 434 SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERV 476
>AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); double-stranded DNA binding / ubiquitin
thiolesterase/ ubiquitin-specific protease |
chr5:2019545-2027834 REVERSE
Length = 1115
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKN---KLEAYVDFPVD-DLDLS--TYISY-KNG 819
A K + P +L + LKRF Y FM++ K+ +FP++ DLD Y+S +
Sbjct: 374 AKKGVLFIDFPPVLQLQLKRFEYD-FMRDTMVKINDRYEFPLELDLDREDGKYLSPDADR 432
Query: 820 QLSHRYMLYAISNHYGSMGGGHYTAFVHHG-GDRWYDFDDSQV 861
+ + Y L+++ H G + GGHY AF+ D+WY FDD +V
Sbjct: 433 SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERV 475
>AT4G22350.1 | Symbols: | ubiquitin carboxyl-terminal hydrolase
family protein | chr4:11804073-11806939 REVERSE
Length = 510
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSTYI-----SYKNGQL 821
A + + + P L+ H+ RF F K K V+FPV D++L YI + + +
Sbjct: 387 ARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENV 446
Query: 822 SHRYMLYAISNHYGSMGGGHYTAFVHHGGDR-WYDFDDSQVHPISQDKIKTSAAYVLFY 879
+Y L A H G G++ FV WY+ D V ++ S AY+ Y
Sbjct: 447 CSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIY 505
>AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEASE
13); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr3:3761758-3770290 REVERSE
Length = 1115
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 767 ASKKLDLWRLPEILVIHLKRFSYTRFMKN---KLEAYVDFPVD-DLDLS--TYISY-KNG 819
A K + P +L + LKRF Y FM++ K+ +FP+ DLD Y+S +
Sbjct: 374 AKKGVLFIDFPPVLQLQLKRFEYD-FMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADK 432
Query: 820 QLSHRYMLYAISNHYGSMGGGHYTAFVHHG-GDRWYDFDDSQV 861
+ + Y L+++ H G + GGHY AF+ D+WY FDD +V
Sbjct: 433 SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERV 475