Jatropha Genome Database

JcCA0317641.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317641.20 + phase: 0 /pseudo/partial
         (277 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62430.1 | Symbols: ATCDS1 | ATCDS1; phosphatidate cytidylylt...   445   e-125
AT4G22340.1 | Symbols:  | phosphatidate cytidylyltransferase, pu...   442   e-124
AT4G22340.3 | Symbols:  | phosphatidate cytidylyltransferase, pu...   442   e-124
AT4G26770.1 | Symbols:  | phosphatidate cytidylyltransferase/ tr...   404   e-113
AT4G22340.2 | Symbols:  | phosphatidate cytidylyltransferase, pu...   376   e-105
AT3G60620.1 | Symbols:  | phosphatidate cytidylyltransferase fam...    48   8e-06
AT2G45150.1 | Symbols:  | phosphatidate cytidylyltransferase fam...    48   9e-06

>AT1G62430.1 | Symbols: ATCDS1 | ATCDS1; phosphatidate
           cytidylyltransferase | chr1:23106274-23108923 REVERSE
          Length = 421

 Score =  445 bits (1145), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/268 (80%), Positives = 238/268 (88%), Gaps = 2/268 (0%)

Query: 1   MQRDNSTSAPSTP--RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMI 58
           M+ +N TS+PSTP  RLRHRRRSNEV+ +  K N   LL++DRNKYKS  +R YST+WMI
Sbjct: 1   MEEENVTSSPSTPVHRLRHRRRSNEVVTDGDKVNASPLLVNDRNKYKSFMVRTYSTLWMI 60

Query: 59  GGFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFV 118
           GGF  +VYMGHLYITAMVVVIQIFMAKELFNLLRKA ED+ LP  + LNWHFFFTAMLFV
Sbjct: 61  GGFVLVVYMGHLYITAMVVVIQIFMAKELFNLLRKAPEDKCLPYIKQLNWHFFFTAMLFV 120

Query: 119 YGRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQ 178
           YGRILSQRL NT+T+D+F Y+LVS LIKYHMAICY LYI GFMWFILTLKKKMYKYQFGQ
Sbjct: 121 YGRILSQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWFILTLKKKMYKYQFGQ 180

Query: 179 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSP 238
           YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPA+LI+INDIFAYIFGFFFG+TPLIKLSP
Sbjct: 181 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYIFGFFFGRTPLIKLSP 240

Query: 239 KKTWEGFIGASVTTMISAFVLCVLCRKF 266
           KKTWEGFIGASVTT+ISAFVL  +  +F
Sbjct: 241 KKTWEGFIGASVTTIISAFVLANILGRF 268


>AT4G22340.1 | Symbols:  | phosphatidate cytidylyltransferase,
           putative / CDP-diglyceride synthetase, putative |
           chr4:11800150-11802549 REVERSE
          Length = 423

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/272 (79%), Positives = 242/272 (88%), Gaps = 2/272 (0%)

Query: 1   MQRDNSTSAPSTP--RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMI 58
           MQ++ +  APS P  R+RHR+R+++V   A K NG HLL++D  KYKS  IRAYST WMI
Sbjct: 1   MQKEIAGDAPSAPTTRVRHRKRNSDVGAGAGKPNGNHLLVNDSKKYKSFLIRAYSTFWMI 60

Query: 59  GGFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFV 118
           GGFA IVY+GHLYITAMVVVIQIFMA+ELFNLLRK HED+ LPGFRLLNWHFFFTAMLFV
Sbjct: 61  GGFALIVYLGHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLNWHFFFTAMLFV 120

Query: 119 YGRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQ 178
           YGRILSQRLVNTVT DK LY+LV+SLIKYHMAICY LYI+GF+WFILTLKKKMYKYQF Q
Sbjct: 121 YGRILSQRLVNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKYQFSQ 180

Query: 179 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSP 238
           YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPA+LIVINDIFAYI GFFFG+TPLIKLSP
Sbjct: 181 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSP 240

Query: 239 KKTWEGFIGASVTTMISAFVLCVLCRKFVAMS 270
           KKTWEGFIGAS+TT+ISAF+L  +  +F+ ++
Sbjct: 241 KKTWEGFIGASITTVISAFLLANIMGRFLWLT 272


>AT4G22340.3 | Symbols:  | phosphatidate cytidylyltransferase,
           putative / CDP-diglyceride synthetase, putative |
           chr4:11800150-11802621 REVERSE
          Length = 447

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/272 (79%), Positives = 242/272 (88%), Gaps = 2/272 (0%)

Query: 1   MQRDNSTSAPSTP--RLRHRRRSNEVIPEASKENGGHLLLHDRNKYKSMWIRAYSTIWMI 58
           MQ++ +  APS P  R+RHR+R+++V   A K NG HLL++D  KYKS  IRAYST WMI
Sbjct: 25  MQKEIAGDAPSAPTTRVRHRKRNSDVGAGAGKPNGNHLLVNDSKKYKSFLIRAYSTFWMI 84

Query: 59  GGFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFV 118
           GGFA IVY+GHLYITAMVVVIQIFMA+ELFNLLRK HED+ LPGFRLLNWHFFFTAMLFV
Sbjct: 85  GGFALIVYLGHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLNWHFFFTAMLFV 144

Query: 119 YGRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQ 178
           YGRILSQRLVNTVT DK LY+LV+SLIKYHMAICY LYI+GF+WFILTLKKKMYKYQF Q
Sbjct: 145 YGRILSQRLVNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKYQFSQ 204

Query: 179 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSP 238
           YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPA+LIVINDIFAYI GFFFG+TPLIKLSP
Sbjct: 205 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSP 264

Query: 239 KKTWEGFIGASVTTMISAFVLCVLCRKFVAMS 270
           KKTWEGFIGAS+TT+ISAF+L  +  +F+ ++
Sbjct: 265 KKTWEGFIGASITTVISAFLLANIMGRFLWLT 296


>AT4G26770.1 | Symbols:  | phosphatidate cytidylyltransferase/
           transferase, transferring phosphorus-containing groups |
           chr4:13482580-13484697 FORWARD
          Length = 471

 Score =  404 bits (1038), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/268 (73%), Positives = 227/268 (84%), Gaps = 4/268 (1%)

Query: 3   RD-NSTSAPSTPRLRHRRRSNEVIPEASKENGG---HLLLHDRNKYKSMWIRAYSTIWMI 58
           RD N T +  T R+RHRRRS+E + E ++ N     +LLL D+NKY+SMWIR  S++WM+
Sbjct: 48  RDYNYTPSSPTARIRHRRRSSENLAEVNRSNVSRVSNLLLGDKNKYRSMWIRTCSSLWML 107

Query: 59  GGFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAMLFV 118
           GG  FI+YMGHLYI AMVVVIQIFMAKELF L R+AHE+R LPGF LLNWHFFFTAMLFV
Sbjct: 108 GGVVFIIYMGHLYIWAMVVVIQIFMAKELFFLRRRAHEERRLPGFWLLNWHFFFTAMLFV 167

Query: 119 YGRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQFGQ 178
           YGRI+ Q+LVNTV+SD+F+Y+LVS LIKY M ICYFLYIAG +WFILTLK KMYKYQFGQ
Sbjct: 168 YGRIIQQQLVNTVSSDRFIYKLVSGLIKYQMVICYFLYIAGLIWFILTLKNKMYKYQFGQ 227

Query: 179 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSP 238
           YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPA LI +ND+ AY FGF+FGKTPLIKLSP
Sbjct: 228 YAWTHMILIVVFTQSSFTVANIFEGIFWFLLPAALIAMNDVAAYFFGFYFGKTPLIKLSP 287

Query: 239 KKTWEGFIGASVTTMISAFVLCVLCRKF 266
           KKTWEGFIGASV T+ISAF+   +  +F
Sbjct: 288 KKTWEGFIGASVATIISAFIFANVLGQF 315


>AT4G22340.2 | Symbols:  | phosphatidate cytidylyltransferase,
           putative / CDP-diglyceride synthetase, putative |
           chr4:11800150-11802172 REVERSE
          Length = 365

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/214 (85%), Positives = 201/214 (93%)

Query: 57  MIGGFAFIVYMGHLYITAMVVVIQIFMAKELFNLLRKAHEDRHLPGFRLLNWHFFFTAML 116
           MIGGFA IVY+GHLYITAMVVVIQIFMA+ELFNLLRK HED+ LPGFRLLNWHFFFTAML
Sbjct: 1   MIGGFALIVYLGHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLNWHFFFTAML 60

Query: 117 FVYGRILSQRLVNTVTSDKFLYQLVSSLIKYHMAICYFLYIAGFMWFILTLKKKMYKYQF 176
           FVYGRILSQRLVNTVT DK LY+LV+SLIKYHMAICY LYI+GF+WFILTLKKKMYKYQF
Sbjct: 61  FVYGRILSQRLVNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKYQF 120

Query: 177 GQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKL 236
            QYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPA+LIVINDIFAYI GFFFG+TPLIKL
Sbjct: 121 SQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKL 180

Query: 237 SPKKTWEGFIGASVTTMISAFVLCVLCRKFVAMS 270
           SPKKTWEGFIGAS+TT+ISAF+L  +  +F+ ++
Sbjct: 181 SPKKTWEGFIGASITTVISAFLLANIMGRFLWLT 214


>AT3G60620.1 | Symbols:  | phosphatidate cytidylyltransferase family
           protein | chr3:22406537-22408239 FORWARD
          Length = 399

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 203 GIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEG 244
           G+   L+    I+ +D FA++ G  FG+TPLI +SPKKTWEG
Sbjct: 267 GLVAILISFCGIIASDTFAFLGGKAFGRTPLISISPKKTWEG 308


>AT2G45150.1 | Symbols:  | phosphatidate cytidylyltransferase family
           protein | chr2:18613402-18615347 FORWARD
          Length = 430

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 4/71 (5%)

Query: 203 GIFWFLLPATLIVINDIFAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTTMISAFVLCVL 262
           G+   L+  + ++  D FA++ G  FG+TPL  +SPKKTWEG    ++  ++    + +L
Sbjct: 294 GLVATLISFSGVIATDTFAFLGGKTFGRTPLTSISPKKTWEG----TIVGLVGCIAITIL 349

Query: 263 CRKFVAMSRSI 273
             K+++  +S+
Sbjct: 350 LSKYLSWPQSL 360