Jatropha Genome Database

JcCA0317631.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317631.30 + phase: 0 /partial
         (59 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13930.1 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA ...    92   8e-20

>AT5G13930.1 | Symbols: CHS, TT4, ATCHS | TT4 (TRANSPARENT TESTA
          4); naringenin-chalcone synthase | chr5:4488762-4490035
          FORWARD
          Length = 395

 Score = 91.7 bits (226), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/57 (70%), Positives = 48/57 (84%)

Query: 3  TVEEVRKAQRAQGPATVLAIGTATPSNCVDQSTYPDYYFRITNSEHKVELKEKFKRM 59
          +++E+R+AQRA GPA +LAIGTA P N V Q+ YPDYYFRITNSEH  +LKEKFKRM
Sbjct: 8  SLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRM 64