Jatropha Genome Database

JcCA0317621.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317621.20 + phase: 0 /partial
         (271 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17990.1 | Symbols: TRP1, pat1 | TRP1 (tryptophan biosynthesi...   348   1e-96

>AT5G17990.1 | Symbols: TRP1, pat1 | TRP1 (tryptophan biosynthesis
           1); anthranilate phosphoribosyltransferase |
           chr5:5957330-5959681 FORWARD
          Length = 444

 Score =  348 bits (894), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 197/235 (83%), Gaps = 1/235 (0%)

Query: 37  FNCSVFAAEKNGSSSSRKSTTFVTALSCVREKSSTPTTAFNELIESLISRVDLTESEAET 96
           F+ S FA  +N   S   S       +C     S+   +FN+LIE+LI RVDL+E+EAE+
Sbjct: 70  FSRSSFACSQNLGLSGGFSAAEALPPACANASPSS-IKSFNQLIETLIDRVDLSETEAES 128

Query: 97  SLYYLLNDGNEALISAFLVLLRAKGETFEEIVGLARAMIKHARTVEGLVDAVDIVGTGGD 156
           SL +LLN+ NEALISAFLVLLRAKGET+EEIVGLARAM+KHAR VEGLVDAVDIVGTGGD
Sbjct: 129 SLEFLLNEANEALISAFLVLLRAKGETYEEIVGLARAMMKHARKVEGLVDAVDIVGTGGD 188

Query: 157 GANTVNISTGASILAAACGTKVAKQGNRSSSSACGSADVLEALGIIIDLDPEGVSKCVNE 216
           GANTVNISTG+SILAAACG KVAKQGNRSSSSACGSADVLEALG+++DL PEG+ +CV E
Sbjct: 189 GANTVNISTGSSILAAACGAKVAKQGNRSSSSACGSADVLEALGVVLDLGPEGIKRCVEE 248

Query: 217 AGIGFMMSPKYHPAMKIVSPVRKKLKVKTVFNILGPMLNPARVPFAVVGVYKEDL 271
            GIGFMMSP YHPAMKIV PVRKKLK+KTVFNILGPMLNPARV +AVVGVY +DL
Sbjct: 249 GGIGFMMSPMYHPAMKIVGPVRKKLKIKTVFNILGPMLNPARVSYAVVGVYHKDL 303