Jatropha Genome Database

JcCA0317621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317621.10 + phase: 0 
         (289 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G50290.1 | Symbols:  | unknown protein | chr5:20461814-204638...   392   e-109
AT3G17350.1 | Symbols:  | unknown protein | chr3:5934111-5935036...   132   2e-31
AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110...    96   3e-20
AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084...    92   5e-19

>AT5G50290.1 | Symbols:  | unknown protein | chr5:20461814-20463896
           FORWARD
          Length = 303

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/250 (71%), Positives = 212/250 (84%), Gaps = 3/250 (1%)

Query: 23  LNPCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSL 82
           ++ CRSYCGNIT+DYPF ++ GCGHPG+RDLLFC+NDVLMFHISSGSYRVL+IDYAYQS+
Sbjct: 19  VDACRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLMFHISSGSYRVLDIDYAYQSI 78

Query: 83  TLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHL 142
           TLH+PH+SNC+TIVLG KGNGF  E WR+PYFNPT+DNVFMLIGCS KSP+FQGFP K +
Sbjct: 79  TLHDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFMLIGCSPKSPIFQGFPEKKV 138

Query: 143 PCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLSKLECEGYS 202
           PCRN+SGM CEEY  CPAW +VG R  G   GSGPP CC V FE++KAINLSKLECEGYS
Sbjct: 139 PCRNISGMSCEEYMSCPAWDMVGYRQPGIHSGSGPPMCCGVGFESVKAINLSKLECEGYS 198

Query: 203 SAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCGY---GSDGIRQMCMCA 259
           SAY+LAPL++ GPS+W++GIRVKY +Q ++ FCRAC AT GTCGY      G+R +CMC 
Sbjct: 199 SAYNLAPLKLRGPSDWAYGIRVKYELQGSDAFCRACVATSGTCGYEPADGGGLRHVCMCD 258

Query: 260 DFNSTSNCDS 269
           + NST+NCDS
Sbjct: 259 NHNSTTNCDS 268


>AT3G17350.1 | Symbols:  | unknown protein | chr3:5934111-5935036
           FORWARD
          Length = 278

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 132/254 (51%), Gaps = 18/254 (7%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISSGSYRVLEIDYAYQSLTLH 85
           CR+ CGNI I+YPF +  GCG P +R +  C  D L F   SGSY+V  IDY  +++ + 
Sbjct: 31  CRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTD-LYFTTPSGSYKVQSIDYEKKTMVIF 89

Query: 86  EPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAKSPLFQGFPGKHLPCR 145
           +P +S C  +      + F +   ++    P+ D VF L  CS  SP+   +  ++L C 
Sbjct: 90  DPAMSTCSIL---QPHHDFKMADIQNTLIRPSYDTVFALFNCSNDSPVHNRY--RNL-CF 143

Query: 146 NVSGMGCEEYYG-CPAWSVVGRRHAGSMFGSG-----PPECCAVAFEAIKAINLSKLECE 199
           N +G  C+E Y  C ++ +    +  S +G+       P CC   ++ ++ ++++ L+C 
Sbjct: 144 NAAGHSCDELYSSCTSFRIF---NTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNILDCS 200

Query: 200 GYSSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEFCRACEATGGTCGYGSDGIRQMCMCA 259
            Y++      +R  GP +WS+GI + YSV E    C  C  +GGTCG+ ++    +C C+
Sbjct: 201 HYTTVIDNGKMRGVGPLDWSYGIELSYSVTEIG--CDRCRKSGGTCGFDAETEIFLCQCS 258

Query: 260 DFNSTSNCDSGTLK 273
             N+    + G  +
Sbjct: 259 GSNNNPTRECGNYR 272


>AT1G10380.1 | Symbols:  | unknown protein | chr1:3400706-3402110
           FORWARD
          Length = 305

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 28/256 (10%)

Query: 26  CRSYCGNITIDYPFSLQYGCGHPGFRDLLFCINDVLMFHISS--GSYRVLEIDYAYQSLT 83
           C+  CG I I YP     GCG P F   + C  D     +++  GSY +  +DYA Q + 
Sbjct: 29  CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88

Query: 84  LHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAK-----SPLFQGFP 138
           + +P +S C         +GF ++ W +P F+   D VF L+ CS       +PL  G  
Sbjct: 89  VTDPSMSTC---ACTRPSHGFGLD-WDAP-FSFHDDTVFTLLDCSVDESPVFTPLSNGSG 143

Query: 139 GKHLPCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCA---VAFEAIKAINLSK 195
              L  R  S +    Y  C A S++  + +          CC    +       ++L+K
Sbjct: 144 RVSLCDRQSSSICTFLYSNCRAISLINLQVS---------TCCVYVPLDLGPSFEMDLNK 194

Query: 196 LECEGYSSAYSLAPLRVDGPSEWSFGIRVKYSVQENEEF---CRACEATGGTCGYGSDGI 252
           L+C  YS  Y+L P +   P  W++GI +KY     +E+   C +CE + G CG+ +   
Sbjct: 195 LKCSSYSGFYNLGPGQESHPENWNYGIALKYKFNVFDEYPGVCGSCERSNGACGFNTQSS 254

Query: 253 RQMCMC-ADFNSTSNC 267
             +C C    N+TS+C
Sbjct: 255 SFVCNCPGGINTTSDC 270


>AT1G11915.1 | Symbols:  | unknown protein | chr1:4021830-4023084
           FORWARD
          Length = 329

 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 29/263 (11%)

Query: 24  NPCRSYCGNITIDYPFSLQYGCGHPGFRDLLFCIND--VLMFHISSGSYRVLEIDYAYQS 81
           N CRS CGNI I+YPFS+  GCG P +R +L C ++   L     SG Y V  I Y+   
Sbjct: 29  NLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDNDTKLELRTPSGKYPVKSISYSDPH 88

Query: 82  LTLHEPHLSNCDTIVLGSKGNGFSVEPWRSPYFNPTADNVFMLIGCSAK------SPLF- 134
           L + +P + NC           FS++   S +F  +  N ++   C+         PLF 
Sbjct: 89  LLVSDPFMWNCQDRDNFRPTRSFSID--SSTHFTVSPQNDYLFFNCNTDKVIVEPKPLFC 146

Query: 135 QGFPGKHLPCRNVSGMGCEEYYGCPAWSVVGRRHAGSMFGSGPPECCAVAFEAIKAINLS 194
           + FP +     + S   C     C           GS  GS    CC+   +A +++ L 
Sbjct: 147 ERFPDRCDSSCDSSSYLCRHLPEC-----------GSALGSR-VSCCSYYPKATQSLRLM 194

Query: 195 KLECEGYSSAYSLAPLRVDGPSEW--SFGIRVKYSVQENEEFCRACEAT---GGTCGYGS 249
             +C  Y+S Y  +    + P +    +GIRV Y      + C  C+ T   GG CG+ +
Sbjct: 195 LQDCATYTSVYWRSTGVENAPYDQFPEYGIRVDYEFPVTMK-CLLCQETTKGGGVCGFNT 253

Query: 250 DGIRQMCMCADFNSTSNCDSGTL 272
                +C+C   N T+ C   +L
Sbjct: 254 RTRDFLCLCKQGNVTTYCKDPSL 276