Jatropha Genome Database

JcCA0317481.40
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317481.40 - phase: 2 /partial
         (151 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...   283   3e-77
AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)...   283   3e-77
AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...   281   1e-76
AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2)...   281   1e-76

>AT3G20290.2 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
           GTP binding / GTPase/ calcium ion binding |
           chr3:7075057-7078655 REVERSE
          Length = 545

 Score =  283 bits (724), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 133/151 (88%), Positives = 145/151 (96%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SF+DKP+NEAA GPIG+ELFEKEQ+DLL+DLKDIPKKACDRRINEFVKRARAAKIHAYII
Sbjct: 395 SFSDKPINEAATGPIGRELFEKEQDDLLADLKDIPKKACDRRINEFVKRARAAKIHAYII 454

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMPA+MGKAK QQ+LID+L DEFGKVQRE HLP GDFPNV+HFREVLSGYNIDKF
Sbjct: 455 SHLKKEMPAIMGKAKAQQKLIDNLEDEFGKVQREHHLPKGDFPNVDHFREVLSGYNIDKF 514

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKM+Q VDDMLGYDIP+LLKNF+NPYD
Sbjct: 515 EKLKPKMLQTVDDMLGYDIPELLKNFKNPYD 545


>AT3G20290.1 | Symbols: ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1);
           GTP binding / GTPase/ calcium ion binding |
           chr3:7075057-7078655 REVERSE
          Length = 545

 Score =  283 bits (724), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 133/151 (88%), Positives = 145/151 (96%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SF+DKP+NEAA GPIG+ELFEKEQ+DLL+DLKDIPKKACDRRINEFVKRARAAKIHAYII
Sbjct: 395 SFSDKPINEAATGPIGRELFEKEQDDLLADLKDIPKKACDRRINEFVKRARAAKIHAYII 454

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMPA+MGKAK QQ+LID+L DEFGKVQRE HLP GDFPNV+HFREVLSGYNIDKF
Sbjct: 455 SHLKKEMPAIMGKAKAQQKLIDNLEDEFGKVQREHHLPKGDFPNVDHFREVLSGYNIDKF 514

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKM+Q VDDMLGYDIP+LLKNF+NPYD
Sbjct: 515 EKLKPKMLQTVDDMLGYDIPELLKNFKNPYD 545


>AT4G05520.1 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
           GTP binding / GTPase/ calcium ion binding |
           chr4:2804522-2807833 FORWARD
          Length = 546

 Score =  281 bits (719), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 131/151 (86%), Positives = 143/151 (94%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP+NE AVGPIGKELFEKEQ DLL+DL D+PKKACDR+INEFVKRAR+AKI+AYI+
Sbjct: 395 SFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIM 454

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMPAMMGK+K QQRL+D+L +EFGKVQREFHLP GDFP+VEHFREVL GYNIDKF
Sbjct: 455 SHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAGDFPSVEHFREVLGGYNIDKF 514

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKMIQAVDDMLGYDIPDLLK FRNPYD
Sbjct: 515 EKLKPKMIQAVDDMLGYDIPDLLKKFRNPYD 545


>AT4G05520.2 | Symbols: ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2);
           GTP binding / GTPase/ calcium ion binding |
           chr4:2804522-2807833 FORWARD
          Length = 545

 Score =  281 bits (719), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 131/151 (86%), Positives = 143/151 (94%)

Query: 1   SFNDKPVNEAAVGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYII 60
           SFNDKP+NE AVGPIGKELFEKEQ DLL+DL D+PKKACDR+INEFVKRAR+AKI+AYI+
Sbjct: 394 SFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIM 453

Query: 61  SHLKKEMPAMMGKAKTQQRLIDSLADEFGKVQREFHLPPGDFPNVEHFREVLSGYNIDKF 120
           SHLKKEMPAMMGK+K QQRL+D+L +EFGKVQREFHLP GDFP+VEHFREVL GYNIDKF
Sbjct: 454 SHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAGDFPSVEHFREVLGGYNIDKF 513

Query: 121 EKLKPKMIQAVDDMLGYDIPDLLKNFRNPYD 151
           EKLKPKMIQAVDDMLGYDIPDLLK FRNPYD
Sbjct: 514 EKLKPKMIQAVDDMLGYDIPDLLKKFRNPYD 544