Jatropha Genome Database

JcCA0317171.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317171.20 + phase: 0 
         (756 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08520.1 | Symbols: PDE166, CHLD | CHLD; ATP binding / magnes...   591   e-169
AT4G18480.1 | Symbols: CHLI1, CH42, CH-42, CHL11, CHLI-1 | CHLI1...   199   4e-51
AT5G45930.1 | Symbols: CHLI2, CHL I2, CHLI-2 | CHLI2 (MAGNESIUM ...   197   2e-50

>AT1G08520.1 | Symbols: PDE166, CHLD | CHLD; ATP binding / magnesium
           chelatase/ nucleoside-triphosphatase/ nucleotide binding
           | chr1:2696538-2700819 FORWARD
          Length = 760

 Score =  591 bits (1523), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 303/405 (74%), Positives = 338/405 (83%), Gaps = 12/405 (2%)

Query: 1   MAFSPTTCSFSV-TCTPYQLQSSILLPSVKWYSLLPAFYSFKLAKRPHTRRFSVLASSAN 59
           MA +P   S  V TC  ++      L     +  LP         R  + RF+V AS AN
Sbjct: 1   MAMTPVASSSPVSTCRLFRCNLLPDLLPKPLFLSLPK------RNRIASCRFTVRAS-AN 53

Query: 60  ATLEPGNGA---VVAPSEKLELSSYGRQFFPLAAVVGQDAIKTALLLGAIDREIGGIAIS 116
           AT+E  NG          + + +SYGRQFFPLAAVVGQ+ IKTALLLGA+DREIGGIAIS
Sbjct: 54  ATVESPNGVPASTSDTDTETDTTSYGRQFFPLAAVVGQEGIKTALLLGAVDREIGGIAIS 113

Query: 117 GRRGTAKTVMARGLHAILPPIDVVVGSVANADPSYPEEWEDGLAER-AYDSDGNVKTQVV 175
           GRRGTAKTVMARGLH ILPPI+VVVGS++NADP+ P+EWED L ER  Y++D  +KT++V
Sbjct: 114 GRRGTAKTVMARGLHEILPPIEVVVGSISNADPACPDEWEDDLDERIEYNADNTIKTEIV 173

Query: 176 RSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLLDEGISN 235
           +SPF+QIPLGVTEDRLIGSVDVEESVK GTTVFQPGLLAEAHRGVLYVDEINLLDEGISN
Sbjct: 174 KSPFIQIPLGVTEDRLIGSVDVEESVKRGTTVFQPGLLAEAHRGVLYVDEINLLDEGISN 233

Query: 236 LLLNVLTEGVNIVEREGISFKHPCKPLLIATYNPEEGAVREHLLDRIAINLSADLPMNFE 295
           LLLNVLT+GVNIVEREGISF+HPCKPLLIATYNPEEGAVREHLLDR+AINLSADLPM+FE
Sbjct: 234 LLLNVLTDGVNIVEREGISFRHPCKPLLIATYNPEEGAVREHLLDRVAINLSADLPMSFE 293

Query: 296 DRVAAVGIATQFQERSNEVFQMVVEETEFAKTQVILAREYLKDVTIGREQLKYLVMEALR 355
           DRVAAVGIATQFQER NEVF+MV EETE AKTQ+ILAREYLKDV I REQLKYLV+EA+R
Sbjct: 294 DRVAAVGIATQFQERCNEVFRMVNEETETAKTQIILAREYLKDVKISREQLKYLVLEAVR 353

Query: 356 GGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAVELVILPRS 400
           GG QGHRAELYAARVAKCLAA+EGREKV +DDL+KAVELVILPRS
Sbjct: 354 GGVQGHRAELYAARVAKCLAAIEGREKVTIDDLRKAVELVILPRS 398



 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/308 (80%), Positives = 256/308 (83%)

Query: 449 IPEEFIFDAEGGLVDEKLLFFXXXXXXXXXXXXXXXNVIFSEDRGRYIKPMLPKGPVKRL 508
           IPEEFIFDAEGGLVDEKLLFF               NVIFSEDRGRYIKPMLPKGPVKRL
Sbjct: 453 IPEEFIFDAEGGLVDEKLLFFAQQAQKRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRL 512

Query: 509 AVDATLRAAAPYQKLRREKDTQKSRKVFVEXXXXXXXXXXXXXXXLVIFVVDASGSMALN 568
           AVDATLRAAAPYQKLRREKD   +RKVFVE               LVIFVVDASGSMALN
Sbjct: 513 AVDATLRAAAPYQKLRREKDISGTRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALN 572

Query: 569 RMQNAKGAALKLLAESYTSRDQVAIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSP 628
           RMQNAKGAALKLLAESYTSRDQV+IIPFRGD+AEVLLPPSRSIAMAR RLERLPCGGGSP
Sbjct: 573 RMQNAKGAALKLLAESYTSRDQVSIIPFRGDAAEVLLPPSRSIAMARNRLERLPCGGGSP 632

Query: 629 LAHGLTTAVRVGLNAEKSGDVGRIMIVAITDGRANISLKXXXXXXXXXXXXXXXXXQELK 688
           LAHGLTTAVRVGLNAEKSGDVGRIMIVAITDGRANI+LK                 +ELK
Sbjct: 633 LAHGLTTAVRVGLNAEKSGDVGRIMIVAITDGRANITLKRSTDPESIAPDAPRPTSKELK 692

Query: 689 DEILEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTKE 748
           DEILEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATT++
Sbjct: 693 DEILEVAGKIYKAGMSLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTRD 752

Query: 749 ALSALKSS 756
           ALS LK+S
Sbjct: 753 ALSDLKNS 760


>AT4G18480.1 | Symbols: CHLI1, CH42, CH-42, CHL11, CHLI-1 | CHLI1;
           ATPase/ magnesium chelatase | chr4:10201897-10203361
           REVERSE
          Length = 424

 Score =  199 bits (507), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/348 (36%), Positives = 182/348 (52%), Gaps = 3/348 (0%)

Query: 45  RPHTRRFSVLASSANATLEPGNGAVVAPSEKLELSSYGRQFFPLAAVVGQDAIKTALLLG 104
           RP   R     S  N   E  +   V    K +     R  +P AA+VGQD +K  LLL 
Sbjct: 49  RPKKNRSRYHVSVMNVATEINSTEQVVG--KFDSKKSARPVYPFAAIVGQDEMKLCLLLN 106

Query: 105 AIDREIGGIAISGRRGTAKTVMARGLHAILPPIDVVVGSVANADPSYPEEWEDGLAERAY 164
            ID +IGG+ I G RGT K+   R L  +LP I+VV G   N+DP  PE     + ER  
Sbjct: 107 VIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEINVVAGDPYNSDPIDPEFMGVEVRERVE 166

Query: 165 DSDGNVKTQVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVD 224
             +  V     +   V +PLG TEDR+ G++D+E+++  G   F+PGLLA+A+RG+LYVD
Sbjct: 167 KGE-QVPVIATKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVD 225

Query: 225 EINLLDEGISNLLLNVLTEGVNIVEREGISFKHPCKPLLIATYNPEEGAVREHLLDRIAI 284
           E+NLLD+ + ++LL+    G N VEREGIS  HP + +LI + NPEEG +R  LLDR  +
Sbjct: 226 EVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGM 285

Query: 285 NLSADLPMNFEDRVAAVGIATQFQERSNEVFQMVVEETEFAKTQVILAREYLKDVTIGRE 344
           +       + + RV  V    +F     +       E +  + Q+  AR  L  V I RE
Sbjct: 286 HAQVGTVRDADLRVKIVEERARFDSNPKDFRDTYKTEQDKLQDQISTARANLSSVQIDRE 345

Query: 345 QLKYLVMEALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDLKKAV 392
               +          G R ++   R AK LAAL+G+++V  DD+   +
Sbjct: 346 LKVKISRVCSELNVDGLRGDIVTNRAAKALAALKGKDRVTPDDVATVI 393


>AT5G45930.1 | Symbols: CHLI2, CHL I2, CHLI-2 | CHLI2 (MAGNESIUM
           CHELATASE I2); ATPase/ magnesium chelatase |
           chr5:18628095-18629565 FORWARD
          Length = 418

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 190/356 (53%), Gaps = 8/356 (2%)

Query: 35  PAFYSFKLAKRPHTRRFSVLASSANATLEPGNGAVVAPSEKLELSSYGRQFFPLAAVVGQ 94
           P   S ++   P   R     S  N   E  +   V  ++K++     R  +P AA+VGQ
Sbjct: 34  PEKLSGRIQFNPKKNRSRYHVSVMNVATEINS---VEQAKKIDSKESARPVYPFAAIVGQ 90

Query: 95  DAIKTALLLGAIDREIGGIAISGRRGTAKTVMARGLHAILPPIDVVVGSVANADPSYPEE 154
           D +K  LLL  ID +IGG+ I G RGT K+   R L  +LP I VV G   N+DP  PE 
Sbjct: 91  DEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEITVVSGDPYNSDPRDPEC 150

Query: 155 WEDGLAERAYDSD--GNVKTQVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGL 212
               + E+    +    ++T++     V +PLG TEDR+ G++D+E+++  G   F+PGL
Sbjct: 151 MGKEVREKVQKGEELSVIETKI---NMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGL 207

Query: 213 LAEAHRGVLYVDEINLLDEGISNLLLNVLTEGVNIVEREGISFKHPCKPLLIATYNPEEG 272
           LA+A+RG+LYVDE+NLLD+ + ++LL+    G N VEREGIS  HP + +LI + NPEEG
Sbjct: 208 LAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEG 267

Query: 273 AVREHLLDRIAINLSADLPMNFEDRVAAVGIATQFQERSNEVFQMVVEETEFAKTQVILA 332
            +R  LLDR  ++       + E RV  V    +F     E  +   EE    + Q+  A
Sbjct: 268 ELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDSNPKEFRETYQEEQLKLQEQITTA 327

Query: 333 REYLKDVTIGREQLKYLVMEALRGGCQGHRAELYAARVAKCLAALEGREKVNVDDL 388
           R  L  V I ++    +          G R ++   R A+ LAAL+GR++V  +D+
Sbjct: 328 RSNLSAVQIDQDLKVKISKVCAELDVDGLRGDMVINRAARALAALQGRDQVTAEDV 383