Jatropha Genome Database
- JcCA0317161.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0317161.10 + phase: 0
(354 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 282 2e-76
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 282 2e-76
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 280 1e-75
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 274 6e-74
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 251 6e-67
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 246 1e-65
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 204 6e-53
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 204 1e-52
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 194 5e-50
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 191 5e-49
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 156 2e-38
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 149 2e-36
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 143 2e-34
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 137 1e-32
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 137 1e-32
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 134 1e-31
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 130 1e-30
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 130 2e-30
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 129 2e-30
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 129 2e-30
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 129 2e-30
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 128 5e-30
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 125 6e-29
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 119 3e-27
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 112 3e-25
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 110 1e-24
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 108 5e-24
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 107 9e-24
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 104 8e-23
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 89 6e-18
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 79 6e-15
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 77 1e-14
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 60 2e-09
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 59 4e-09
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 58 9e-09
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 201/308 (65%), Gaps = 51/308 (16%)
Query: 55 ELRLGLPGSQSPERKPLTGV--------SLFGKDIETNNNGYSLSSLKNLVSGAKRGFSD 106
ELRLGLP SQSPER+ G+ L + + +NG + + KN+VSG KRGF+D
Sbjct: 53 ELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFAD 112
Query: 107 AIDSSSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKP 166
D SG SV G ++ + SP+ + K
Sbjct: 113 TWDEFSGV-KGSVRPGGGINM-----MLSPK----------------------VKDVSKS 144
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYV 226
+Q + S G +NAPAAKAQVVGWPPIRS+RKNTM S+ +KNT++ +GK G G L+V
Sbjct: 145 IQEERSHAKGG--LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFV 202
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCG-SGFPGR 285
KVSMDGAPYLRKVDL+TY++Y +LSSALEKMFSCFT+ GQCG G GR
Sbjct: 203 KVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTL------------GQCGLHGAQGR 250
Query: 286 DGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPR 345
+ +SE LKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+FT+TC++L+IMKGS++IGLAP
Sbjct: 251 ERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPG 310
Query: 346 AMEKCKNR 353
A+EK KN+
Sbjct: 311 AVEKSKNK 318
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 201/308 (65%), Gaps = 51/308 (16%)
Query: 55 ELRLGLPGSQSPERKPLTGV--------SLFGKDIETNNNGYSLSSLKNLVSGAKRGFSD 106
ELRLGLP SQSPER+ G+ L + + +NG + + KN+VSG KRGF+D
Sbjct: 53 ELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFAD 112
Query: 107 AIDSSSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKP 166
D SG SV G ++ + SP+ + K
Sbjct: 113 TWDEFSGV-KGSVRPGGGINM-----MLSPK----------------------VKDVSKS 144
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYV 226
+Q + S G +NAPAAKAQVVGWPPIRS+RKNTM S+ +KNT++ +GK G G L+V
Sbjct: 145 IQEERSHAKGG--LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFV 202
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCG-SGFPGR 285
KVSMDGAPYLRKVDL+TY++Y +LSSALEKMFSCFT+ GQCG G GR
Sbjct: 203 KVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTL------------GQCGLHGAQGR 250
Query: 286 DGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPR 345
+ +SE LKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+FT+TC++L+IMKGS++IGLAP
Sbjct: 251 ERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPG 310
Query: 346 AMEKCKNR 353
A+EK KN+
Sbjct: 311 AVEKSKNK 318
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 222/366 (60%), Gaps = 75/366 (20%)
Query: 1 MSIPKEHDYIGLSETSSPME--RISDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRL 58
+S+ EHDYIGLSE + ME +SDK ELRL
Sbjct: 3 VSVAAEHDYIGLSEFPT-MEATTMSDKTKTRDNNNGLNFKAT--------------ELRL 47
Query: 59 GLPGSQSPERKPLTGVSLFGKDIETNNNGYSLSSLKNLVSGAKRGFSDAIDSSSGKWVFS 118
GLPGS+SPER ++ +L+ VSGAKR FSDAI+ S+ KWVFS
Sbjct: 48 GLPGSESPER--------------VDSRFLALNKSSCPVSGAKRVFSDAINDSN-KWVFS 92
Query: 119 VNNGSET-DLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKPVQGKSSEVSGA 177
+ + T D+ G+ + +G + + ++PA PV+ K S
Sbjct: 93 PGSTTATGDVGSGSGPRTSVVKDGKSTTF--TKPAV------------PVKEKKS----- 133
Query: 178 NENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKN------TEDAEGKSG--FGCLYVKVS 229
++ APA+KAQVVGWPPIRSFRKN+M S+ ++ TE+AE KSG CLYVKVS
Sbjct: 134 --SATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVS 191
Query: 230 MDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGS-GFPGRDGL 288
M+GAPYLRK+DLKTY +Y+ELSSALEKMFSCFTIG Q GS G GRDGL
Sbjct: 192 MEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIG------------QFGSHGGCGRDGL 239
Query: 289 SETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAME 348
+E+ L DLL GSEYV+TYEDKD DWMLVGDVPWEMF +C++LRIMK SEAIGLAPR ME
Sbjct: 240 NESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVME 299
Query: 349 KCKNRN 354
KC++RN
Sbjct: 300 KCRSRN 305
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 274 bits (701), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/308 (51%), Positives = 199/308 (64%), Gaps = 53/308 (17%)
Query: 55 ELRLGLPGSQSPERKPLTGV--------SLFGKDIETNNNGYSLSSLKNLVSGAKRGFSD 106
ELRLGLP SQSPER+ G+ L + + +NG + + KN+VSG KRGF+D
Sbjct: 53 ELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFAD 112
Query: 107 AIDSSSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKP 166
D SG SV G ++ + SP+ + K
Sbjct: 113 TWDEFSGV-KGSVRPGGGINM-----MLSPK----------------------VKDVSKS 144
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYV 226
+Q + S G +NAPAAKAQVVGWPPIRS+RKNTM S+ +KNT++ +GK G G L+V
Sbjct: 145 IQEERSHAKGG--LNNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFV 202
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCG-SGFPGR 285
KVSMDGAPYLRKVDL+TY++Y +LSSALEKMFSCFT+ GQCG G GR
Sbjct: 203 KVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTL------------GQCGLHGAQGR 250
Query: 286 DGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPR 345
+ +SE LKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+FT+TC++L+IMKGS++IGL
Sbjct: 251 ERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLG-- 308
Query: 346 AMEKCKNR 353
A+EK KN+
Sbjct: 309 AVEKSKNK 316
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 199/368 (54%), Gaps = 83/368 (22%)
Query: 5 KEHDYIGLSETSSPMERISDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRLGLPGSQ 64
KEH+Y+GLS+ SS EL LGLPGSQ
Sbjct: 32 KEHNYLGLSDCSS---------------VGSSTLSPLAEDDKATISLKATELTLGLPGSQ 76
Query: 65 SPERKPLTGVSLFGKDIETNNNGYSL---------SSLKNLVSGAKRGFSDAIDS----- 110
SP R T ++L + L SS KN SG KRGFSD +D
Sbjct: 77 SPARD--TELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAK 134
Query: 111 ----SSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKP 166
+ W+F +++ K P+G
Sbjct: 135 SSVYTEKNWMFPEAAATQSVTKKDVPQNIPKG---------------------------- 166
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYV 226
+ S N +S+ PAAKAQ+VGWPP+RS+RKNT+ + KN+++ +G+ G G L+V
Sbjct: 167 ------QSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATT-CKNSDEVDGRPGSGALFV 219
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGS-GFPGR 285
KVSMDGAPYLRKVDL++Y+NY ELSSALEKMF+ FT+G QCGS G G+
Sbjct: 220 KVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLG------------QCGSNGAAGK 267
Query: 286 DGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPR 345
D LSET LKDLL+G +YVLTYEDKDGDWMLVGDVPWEMF D C++L+IMKG +AIGLAPR
Sbjct: 268 DMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAPR 327
Query: 346 AMEKCKNR 353
AMEK K R
Sbjct: 328 AMEKSKMR 335
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 199/370 (53%), Gaps = 85/370 (22%)
Query: 5 KEHDYIGLSETSSPMERISDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRLGLPGSQ 64
KEH+Y+GLS+ SS EL LGLPGSQ
Sbjct: 32 KEHNYLGLSDCSS---------------VGSSTLSPLAEDDKATISLKATELTLGLPGSQ 76
Query: 65 SPERKPLTGVSLFGKDIETNNNGYSL---------SSLKNLVSGAKRGFSDAIDS----- 110
SP R T ++L + L SS KN SG KRGFSD +D
Sbjct: 77 SPARD--TELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAK 134
Query: 111 ----SSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEVVGVIAQSPKP 166
+ W+F +++ K P+G
Sbjct: 135 SSVYTEKNWMFPEAAATQSVTKKDVPQNIPKG---------------------------- 166
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYV 226
+ S N +S+ PAAKAQ+VGWPP+RS+RKNT+ + KN+++ +G+ G G L+V
Sbjct: 167 ------QSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATT-CKNSDEVDGRPGSGALFV 219
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGS-GFPGR 285
KVSMDGAPYLRKVDL++Y+NY ELSSALEKMF+ FT+G QCGS G G+
Sbjct: 220 KVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLG------------QCGSNGAAGK 267
Query: 286 DGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGL--A 343
D LSET LKDLL+G +YVLTYEDKDGDWMLVGDVPWEMF D C++L+IMKG +AIGL A
Sbjct: 268 DMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAA 327
Query: 344 PRAMEKCKNR 353
PRAMEK K R
Sbjct: 328 PRAMEKSKMR 337
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 123/184 (66%), Gaps = 27/184 (14%)
Query: 184 PAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFG--------------CLYVKVS 229
P AKAQVVGWPP+RSFRKN M + EG YVKVS
Sbjct: 65 PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVS 124
Query: 230 MDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLS 289
MDGAPYLRK+DLK Y Y +LS+AL KMFS FTIG + G G +D ++
Sbjct: 125 MDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIG---------NYGPQGM----KDFMN 171
Query: 290 ETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAMEK 349
E+ L DLL+GS+YV TYEDKDGDWMLVGDVPWEMF D+C+R+RIMKGSEAIGLAPRA+EK
Sbjct: 172 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEK 231
Query: 350 CKNR 353
CKNR
Sbjct: 232 CKNR 235
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 124/172 (72%), Gaps = 15/172 (8%)
Query: 184 PAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVDLKT 243
P AKAQVVGWPP+R++RKN M + + E+A G +VKVSMDGAPYLRKVDLK
Sbjct: 71 PPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKM 130
Query: 244 YSNYVELSSALEKMFSCFTIG-YRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEY 302
Y++Y +LS AL KMFS FT+G Y M D+ ++E+ + DLL+ SEY
Sbjct: 131 YTSYKDLSDALAKMFSSFTMGSYGAQGMIDF--------------MNESKVMDLLNSSEY 176
Query: 303 VLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAMEKCKNRN 354
V +YEDKDGDWMLVGDVPW MF ++C+RLRIMKGSEAIGLAPRAMEK KNR+
Sbjct: 177 VPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 150/257 (58%), Gaps = 55/257 (21%)
Query: 97 VSGAKRGFSDAIDSSSGKWVFSVNNGSETDLSKGAVLFSPRGDNGNTQKYCESEPAKKEV 156
V+G KRGFS+ +D ++NN EPA KE
Sbjct: 27 VTGNKRGFSETVDLK-----LNLNN----------------------------EPANKEG 53
Query: 157 VGVIAQSPKPVQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAE 216
+ + V S E S ++ P AKAQVVGWPP+RS+RKN MVS K++ E
Sbjct: 54 ----STTHDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVS-CQKSSGGPE 108
Query: 217 GKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSG 276
+ +VKVSMDGAPYLRK+DL+ Y +Y ELS+AL MFS FT+G G
Sbjct: 109 AAA-----FVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKH--------GG 155
Query: 277 QCGSGFPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKG 336
+ G D ++E L DL++ +YV +YEDKDGDWMLVGDVPW MF DTC+RLR+MKG
Sbjct: 156 EEGM----IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKG 211
Query: 337 SEAIGLAPRAMEKCKNR 353
S+AIGLAPRAMEKCK+R
Sbjct: 212 SDAIGLAPRAMEKCKSR 228
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 124/183 (67%), Gaps = 28/183 (15%)
Query: 184 PAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSG----------FGCLYVKVSMDGA 233
P AKAQVVGWPP+R++RKN M K + AE S G VKVSMDGA
Sbjct: 77 PPAKAQVVGWPPVRNYRKNMMTQQ--KTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGA 134
Query: 234 PYLRKVDLKTYSNYVELSSALEKMFSCFTIG-YRLVFMNDYDSGQCGSGFPGRDGLSETC 292
PYLRKVDLK Y +Y +LS AL KMFS FT+G Y M D+ ++E+
Sbjct: 135 PYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDF--------------MNESK 180
Query: 293 LKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAMEK-CK 351
L +LL+ SEYV +YEDKDGDWMLVGDVPWEMF ++C+RLRIMKGSEA+GLAPRAMEK CK
Sbjct: 181 LMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCK 240
Query: 352 NRN 354
NR+
Sbjct: 241 NRS 243
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 116/204 (56%), Gaps = 39/204 (19%)
Query: 143 TQKYCESEPAKKEVVGVIAQSPKPVQGKSSEV---SGANENSNAPAAKAQVVGWPPIRSF 199
T CE+ KE V + K V +E S + + +P KAQ+VGWPP+RS+
Sbjct: 19 TDNVCEA----KERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQIVGWPPVRSY 74
Query: 200 RKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFS 259
RKN + S KN + EG+ +YVKVSMDGAPYLRK+DL Y Y EL ALE MF
Sbjct: 75 RKNNIQSK--KNESEHEGQG----IYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK 128
Query: 260 CFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDV 319
F++G + RDG GS++V TYEDKDGDWML+GDV
Sbjct: 129 -FSVG----------------EYFERDGY---------KGSDFVPTYEDKDGDWMLIGDV 162
Query: 320 PWEMFTDTCRRLRIMKGSEAIGLA 343
PWEMF TC+RLRIMKGSEA GL
Sbjct: 163 PWEMFICTCKRLRIMKGSEAKGLG 186
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 103/174 (59%), Gaps = 36/174 (20%)
Query: 170 KSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVS 229
K E +G E ++ P KAQ+VGWPP+RS+RKN N+ ++EG+ YVKVS
Sbjct: 45 KEIESTGKTETASPP--KAQIVGWPPVRSYRKN----NVQTKKSESEGQGN----YVKVS 94
Query: 230 MDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLS 289
MDGAPYLRK+DL Y Y EL +LE MF F++G
Sbjct: 95 MDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVG------------------------- 128
Query: 290 ETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLA 343
E ++ GS++V TYEDKDGDWMLVGDVPWEMF +C+RLRIMKGSE GL
Sbjct: 129 EYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 92/165 (55%), Gaps = 43/165 (26%)
Query: 178 NENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLR 237
+E + P K Q+VGWPP+RS RKN + YVKVSMDGAPYLR
Sbjct: 49 DEEESTPPTKTQIVGWPPVRSSRKNNNSVS-----------------YVKVSMDGAPYLR 91
Query: 238 KVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLL 297
K+DLKTY NY EL ALE MF + E C ++
Sbjct: 92 KIDLKTYKNYPELLKALENMFKVM--------------------------IGEYCEREGY 125
Query: 298 HGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGL 342
GS +V TYEDKDGDWMLVGDVPW+MF+ +C+RLRIMKGS+A L
Sbjct: 126 KGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 93/150 (62%), Gaps = 27/150 (18%)
Query: 184 PAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSG----------FGCLYVKVSMDGA 233
P AKAQVVGWPP+R++RKN M K + AE S G VKVSMDGA
Sbjct: 77 PPAKAQVVGWPPVRNYRKNMMTQQ--KTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGA 134
Query: 234 PYLRKVDLKTYSNYVELSSALEKMFSCFTIG-YRLVFMNDYDSGQCGSGFPGRDGLSETC 292
PYLRKVDLK Y +Y +LS AL KMFS FT+G Y M D+ ++E+
Sbjct: 135 PYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDF--------------MNESK 180
Query: 293 LKDLLHGSEYVLTYEDKDGDWMLVGDVPWE 322
L +LL+ SEYV +YEDKDGDWMLVGDVPWE
Sbjct: 181 LMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 39/205 (19%)
Query: 138 GDNGNTQKYCESEPAKKEVVGVIAQSPKPVQGKSSEVSGANENSNAPAAKAQVVGWPPIR 197
GDN + C S KK V+ + S + V + E+ + P K+Q VGWPP+
Sbjct: 19 GDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVEDESLPVVKSQAVGWPPVC 78
Query: 198 SFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKM 257
S+R+ KN E+A G YVKVSMDG PY+RK+DL + ++Y+ L + LE +
Sbjct: 79 SYRRK-------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENL 127
Query: 258 FSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVG 317
F C IG ++G + C EY++ YEDKD DWMLVG
Sbjct: 128 FGCLGIGV------------------AKEG--KKC--------EYIIIYEDKDRDWMLVG 159
Query: 318 DVPWEMFTDTCRRLRIMKGSEAIGL 342
DVPW+MF ++C+RLRI+K S+A G
Sbjct: 160 DVPWQMFKESCKRLRIVKRSDATGF 184
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 104/175 (59%), Gaps = 37/175 (21%)
Query: 177 ANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYL 236
A + +++PAAK+QVVGWPP+ S+RK KN+ + G YVKVSMDG PYL
Sbjct: 58 AEKVNDSPAAKSQVVGWPPVCSYRK--------KNSCKEASTTKVGLGYVKVSMDGVPYL 109
Query: 237 RKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDL 296
RK+DL + Y +L+ AL+K+F G+R G G +DG + C
Sbjct: 110 RKMDLGSSQGYDDLAFALDKLF-----GFR------------GIGVALKDG--DNC---- 146
Query: 297 LHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEA--IGLAPRAMEK 349
EYV YEDKDGDWML GDVPW MF ++C+RLRIMK S+A GL PR +++
Sbjct: 147 ----EYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 109/204 (53%), Gaps = 42/204 (20%)
Query: 167 VQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCL-- 224
V K + S ++ S+ P + +QVVGWPPI S R N++V+N A + E ++G +
Sbjct: 54 VGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKD 113
Query: 225 -----------------YVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRL 267
++KV+MDG RKVDL +S+Y L+ LE MF
Sbjct: 114 DEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF--------- 164
Query: 268 VFMNDYDSGQCGSGFPGRDGLSETCLK--DLLHGS-EYVLTYEDKDGDWMLVGDVPWEMF 324
F + PG GL+ K LL GS E+VLTYEDK+GDWMLVGDVPW MF
Sbjct: 165 -FRTN----------PGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMF 213
Query: 325 TDTCRRLRIMKGSEAIGLAPRAME 348
++ +RLR+MK SEA GLA R E
Sbjct: 214 INSVKRLRVMKTSEANGLAARNQE 237
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 96/163 (58%), Gaps = 41/163 (25%)
Query: 177 ANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYL 236
+ E S P AK Q+VGWPP+RS RKN N++ YVKVSMDGAPYL
Sbjct: 43 STEESAPPPAKTQIVGWPPVRSNRKNNNNKNVS---------------YVKVSMDGAPYL 87
Query: 237 RKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDL 296
RK+DLK Y NY EL ALE MF FT+G + R+G
Sbjct: 88 RKIDLKMYKNYPELLKALENMFK-FTVG----------------EYSEREGY-------- 122
Query: 297 LHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEA 339
GS +V TYEDKDGDWMLVGDVPW+MF+ +C++LRIMKGSEA
Sbjct: 123 -KGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 107/190 (56%), Gaps = 31/190 (16%)
Query: 170 KSSEVSGANENSNAPAAKA-QVVGWPPIRSFRKNTMVSNL-AKNTED------------- 214
++S ++G +++ AA + QVVGWPPIR++R N+MV+ A TED
Sbjct: 68 RASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNR 127
Query: 215 AEGKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYD 274
++ ++VKV+MDG P RK+DL + Y LS+ LE+MF +G R +
Sbjct: 128 SDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTL------ 181
Query: 275 SGQCGSGFPGRDGLSETCLKDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRI 333
DG ET +K L GS VLTYEDK+GDWMLVGDVPW MF + RRLRI
Sbjct: 182 ---------ETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRI 232
Query: 334 MKGSEAIGLA 343
MK SEA G A
Sbjct: 233 MKTSEATGKA 242
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 106/205 (51%), Gaps = 42/205 (20%)
Query: 166 PVQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCL- 224
P G A+ ++P +QVVGWPPI S R N++V+N A + E ++G +
Sbjct: 52 PSVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVK 111
Query: 225 ------------------YVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYR 266
++KV+MDG RKVDL +S+Y L+ LE MF
Sbjct: 112 DDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-------- 163
Query: 267 LVFMNDYDSGQCGSGFPGRDGLSETCLK--DLLHGS-EYVLTYEDKDGDWMLVGDVPWEM 323
F + PG GL+ K LL GS E+VLTYEDK+GDWMLVGDVPW M
Sbjct: 164 --FRTN----------PGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRM 211
Query: 324 FTDTCRRLRIMKGSEAIGLAPRAME 348
F ++ +RLR+MK SEA GLA R E
Sbjct: 212 FINSVKRLRVMKTSEANGLAARNQE 236
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 106/205 (51%), Gaps = 42/205 (20%)
Query: 166 PVQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCL- 224
P G A+ ++P +QVVGWPPI S R N++V+N A + E ++G +
Sbjct: 52 PSVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVK 111
Query: 225 ------------------YVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYR 266
++KV+MDG RKVDL +S+Y L+ LE MF
Sbjct: 112 DDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-------- 163
Query: 267 LVFMNDYDSGQCGSGFPGRDGLSETCLK--DLLHGS-EYVLTYEDKDGDWMLVGDVPWEM 323
F + PG GL+ K LL GS E+VLTYEDK+GDWMLVGDVPW M
Sbjct: 164 --FRTN----------PGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRM 211
Query: 324 FTDTCRRLRIMKGSEAIGLAPRAME 348
F ++ +RLR+MK SEA GLA R E
Sbjct: 212 FINSVKRLRVMKTSEANGLAARNQE 236
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 106/188 (56%), Gaps = 31/188 (16%)
Query: 170 KSSEVSGANENSNAPAAKA-QVVGWPPIRSFRKNTMVSNL-AKNTED------------- 214
++S ++G +++ AA + QVVGWPPIR++R N+MV+ A TED
Sbjct: 68 RASVIAGIKRTADSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNR 127
Query: 215 AEGKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYD 274
++ ++VKV+MDG P RK+DL + Y LS+ LE+MF +G R +
Sbjct: 128 SDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTL------ 181
Query: 275 SGQCGSGFPGRDGLSETCLKDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRI 333
DG ET +K L GS VLTYEDK+GDWMLVGDVPW MF + RRLRI
Sbjct: 182 ---------ETDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRI 232
Query: 334 MKGSEAIG 341
MK SEA G
Sbjct: 233 MKTSEATG 240
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 109/225 (48%), Gaps = 42/225 (18%)
Query: 152 AKKEVVGVIAQSPKPVQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKN 211
A KE ++ P G ++ +P +QVVGWPPI R N++V+N A
Sbjct: 32 AWKERGRILTAKDFPSVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMK 91
Query: 212 TEDAEGKSG---------------------FGCLYVKVSMDGAPYLRKVDLKTYSNYVEL 250
AE G G +VKV+MDG RKVD++ +S+Y L
Sbjct: 92 AARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENL 151
Query: 251 SSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEYVLTYEDKD 310
+ LE+MF T G R+ + L D S++VLTYEDK+
Sbjct: 152 AQTLEEMFFGMT------------------GTTCREKVKPLRLLD--GSSDFVLTYEDKE 191
Query: 311 GDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPRAME-KCKNRN 354
GDWMLVGDVPW MF ++ +RLRIM SEA GLAPR E K + RN
Sbjct: 192 GDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRN 236
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 42/154 (27%)
Query: 184 PAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVDLKT 243
PA K+QVVGWPP+ S+R+ KN+ + S YVKVS+DGA +LRK+DL+
Sbjct: 48 PAKKSQVVGWPPVCSYRR--------KNSLERTKSS-----YVKVSVDGAAFLRKIDLEM 94
Query: 244 YSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEYV 303
Y Y +L+SAL+ +F C+ ++D D L SE V
Sbjct: 95 YKCYQDLASALQILFGCYI---------NFD--------------------DTLKESECV 125
Query: 304 LTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGS 337
YEDKDGDWML GDVPWEMF +C+RLRIMK S
Sbjct: 126 PIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 88/177 (49%), Gaps = 37/177 (20%)
Query: 191 VGWPPIRSFRKNTMVSNL------------------------AKNTEDAEGKSGFGCLYV 226
VGWPP+R++R N++V+ AKN + KS + V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 227 KVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRD 286
KV+MDG RKVDL +Y L L+ MF F I S S G
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMF--FQI----------PSPVTRSNTQGYK 202
Query: 287 GLSETCLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGL 342
+ ETC LL GS EY++TY+DKDGDWMLVGDVPW+MF + RLRIMK S G+
Sbjct: 203 TIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 98/184 (53%), Gaps = 33/184 (17%)
Query: 170 KSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAK-NTEDAEG----KSGFG-- 222
K++ V ++ AP VVGWPP+RSFRKN ++ +K E + G KS G
Sbjct: 87 KTTSVPHISQKRTAPGP---VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEK 143
Query: 223 -------CLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDS 275
++VK++MDG P RKVDL Y++Y +LS ++K+F R D
Sbjct: 144 QVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQR-----DISD 198
Query: 276 GQCGSGFPGRDGLSETCLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIM 334
GQ E + LL G E+ LTYED +GD MLVGDVPW+MF + +RLR++
Sbjct: 199 GQG----------EEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVI 248
Query: 335 KGSE 338
K SE
Sbjct: 249 KSSE 252
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 43/220 (19%)
Query: 139 DNGNTQKYCESEPAKKEVVGVIAQSPKPVQGKSSEVSGANENSNAPAAKAQVVGWPPIRS 198
D+ + ++ + EP K ++ + + P K++ S+ A VVGWPP+RS
Sbjct: 54 DDESMIRHMKKEPKDKSILSLAGKYFSPSSTKTT--------SHKRTAPGPVVGWPPVRS 105
Query: 199 FRKNTMVSNLAKNTEDAEGKSGF-------------------GCLYVKVSMDGAPYLRKV 239
FRKN + +K D+ +G G ++VK++M G P RKV
Sbjct: 106 FRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKV 165
Query: 240 DLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHG 299
DL +++Y +LS ++K+F R D+ S E + LL G
Sbjct: 166 DLSAHNSYEQLSFTVDKLFRGLLAAQR-----DFPSSIE----------DEKPITGLLDG 210
Query: 300 S-EYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSE 338
+ EY LTYED +GD MLVGDVPW+MF + +RLR++K SE
Sbjct: 211 NGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 48/169 (28%)
Query: 177 ANENS--NAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAP 234
A+EN+ ++ Q+VGWPP+ + RK YVKV++DGA
Sbjct: 56 AHENNYISSMVTNDQLVGWPPVATARKTVRRK------------------YVKVALDGAA 97
Query: 235 YLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETC-L 293
YLRKVDL Y Y +L +ALE MF G+ C +
Sbjct: 98 YLRKVDLGMYDCYGQLFTALENMFQ---------------------------GIITICRV 130
Query: 294 KDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGL 342
+L E+V TYEDKDGD MLVGDVPW MF ++C+R+R+MK +AIGL
Sbjct: 131 TELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 34/165 (20%)
Query: 181 SNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVD 240
SN A VVGWPP+RS R+N + + L + + E LYVK++M+G P RKV+
Sbjct: 40 SNNRVEVAPVVGWPPVRSSRRN-LTAQLKEEMKKKESDEE-KELYVKINMEGVPIGRKVN 97
Query: 241 LKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGS 300
L Y+NY +LS A++++FS +D DL
Sbjct: 98 LSAYNNYQQLSHAVDQLFS------------------------KKDSW------DL--NR 125
Query: 301 EYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAIGLAPR 345
+Y L YED +GD +LVGDVPWEMF T +RL ++K S A L+PR
Sbjct: 126 QYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 79/156 (50%), Gaps = 39/156 (25%)
Query: 181 SNAPAAKAQVVGWPPIRSFRKNTMV-SNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKV 239
S +P +A+ WPPI+S ++T+ L + +D L+VKV M+G P RK+
Sbjct: 37 STSPQREARQ-DWPPIKSRLRDTLKGRRLLRRGDDT-------SLFVKVYMEGVPIGRKL 88
Query: 240 DLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHG 299
DL +S Y L L MF I CG+ +D H
Sbjct: 89 DLCVFSGYESLLENLSHMFDTSII--------------CGN-------------RDRKH- 120
Query: 300 SEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMK 335
+VLTYEDKDGDWM+VGD+PW+MF +T RRL+I +
Sbjct: 121 --HVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 26/116 (22%)
Query: 222 GCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSG 281
G YVKV+M+G P RK+DL + + Y +L L+ MF+ +++ +
Sbjct: 83 GSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNA-----SILWAEE--------- 128
Query: 282 FPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGS 337
+D+ + +VLTY DK+GDWM+VGDVPWEMF T RRL+I + +
Sbjct: 129 ------------EDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 26/114 (22%)
Query: 222 GCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGYRLVFMNDYDSGQCGSG 281
G YVKV+M+G P RK+DL + + Y +L + L+ MF+ +
Sbjct: 81 GSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASIL------------------ 122
Query: 282 FPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMK 335
+E +D+ +VLTY DK+GDWM+VGDVPWEMF + RRL+I +
Sbjct: 123 ------WAEE--EDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 166 PVQGKSSEVSGANENSNAPAAKAQVVGWPPIRSFRKNTMVSNLAKNTEDAEGKSG----- 220
P G ++ +P +QVVGWPPI R N++V+N A AE G
Sbjct: 46 PSVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVV 105
Query: 221 ----------------FGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFT 262
G +VKV+MDG RKVD++ +S+Y L+ LE+MF T
Sbjct: 106 KNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMT 163
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 27/140 (19%)
Query: 201 KNTMVSNLAKNTEDAEGKSGFGCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSC 260
++T LA+ + EG+S YVKV++DG RKV L Y L+ L MF
Sbjct: 76 EDTGHQRLAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGM 135
Query: 261 FTIGYRLVFMNDYDSGQCGSGFPGRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVP 320
T+ +F + SE+ L Y D++G W VGDVP
Sbjct: 136 QTVSGLRLFQTE---------------------------SEFSLVYRDREGIWRNVGDVP 168
Query: 321 WEMFTDTCRRLRIMKGSEAI 340
W+ F ++ R+RI + ++A+
Sbjct: 169 WKEFVESVDRMRIARRNDAL 188
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 225 YVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTI-GYRLVFMNDYDSGQCGSGFP 283
YVKV+MDG RKV + + +Y L+ LE MF ++ G RL M
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQME------------ 141
Query: 284 GRDGLSETCLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDTCRRLRIMKGSEAI 340
SE+ L Y D++G W GDVPW F ++ RLRI + ++A+
Sbjct: 142 ----------------SEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDAV 182