Jatropha Genome Database

JcCA0317081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0317081.10 - phase: 0 
         (226 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26110.1 | Symbols:  | ATP binding / catalytic/ protein kinas...   395   e-110
AT5G26110.2 | Symbols:  | ATP binding / protein kinase | chr5:91...   289   8e-79
AT1G08120.1 | Symbols:  | LOCATED IN: cellular_component unknown...    88   3e-18

>AT5G26110.1 | Symbols:  | ATP binding / catalytic/ protein kinase |
           chr5:9118239-9119352 REVERSE
          Length = 226

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/226 (82%), Positives = 207/226 (91%)

Query: 1   MEINSDVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRLNAE 60
           M+   +V+D SL+LIKQGAEARV+ESTF GR+SIVKERFSKKYRHP LD+KLTLKRLNAE
Sbjct: 1   MDCEENVRDESLVLIKQGAEARVFESTFAGRRSIVKERFSKKYRHPILDAKLTLKRLNAE 60

Query: 61  ARCMTKARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQ 120
           ARCMTKAR+LGV TPVLYA+D LLH+LT EY++G SVKDIFLEFG +GVVEERL D+A Q
Sbjct: 61  ARCMTKARKLGVCTPVLYAVDTLLHSLTLEYIEGVSVKDIFLEFGTNGVVEERLDDVAAQ 120

Query: 121 IGDAIGKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERAL 180
           IG AI KLHDGGL HGDLTTSNML+R+GTNQLVLIDFGLS TSTLPEDKAVDLYVLERAL
Sbjct: 121 IGAAIAKLHDGGLAHGDLTTSNMLVRSGTNQLVLIDFGLSVTSTLPEDKAVDLYVLERAL 180

Query: 181 LSMHSSCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           LSMHSSCGNVMDRI+ AY+KSSKQWS+T NKLAQVRQRGRKRTM+G
Sbjct: 181 LSMHSSCGNVMDRILTAYRKSSKQWSATFNKLAQVRQRGRKRTMIG 226


>AT5G26110.2 | Symbols:  | ATP binding / protein kinase |
           chr5:9118239-9118990 REVERSE
          Length = 163

 Score =  289 bits (740), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 137/163 (84%), Positives = 150/163 (92%)

Query: 64  MTKARRLGVSTPVLYALDPLLHTLTFEYVDGHSVKDIFLEFGLHGVVEERLADIAMQIGD 123
           MTKAR+LGV TPVLYA+D LLH+LT EY++G SVKDIFLEFG +GVVEERL D+A QIG 
Sbjct: 1   MTKARKLGVCTPVLYAVDTLLHSLTLEYIEGVSVKDIFLEFGTNGVVEERLDDVAAQIGA 60

Query: 124 AIGKLHDGGLIHGDLTTSNMLIRNGTNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSM 183
           AI KLHDGGL HGDLTTSNML+R+GTNQLVLIDFGLS TSTLPEDKAVDLYVLERALLSM
Sbjct: 61  AIAKLHDGGLAHGDLTTSNMLVRSGTNQLVLIDFGLSVTSTLPEDKAVDLYVLERALLSM 120

Query: 184 HSSCGNVMDRIIAAYKKSSKQWSSTMNKLAQVRQRGRKRTMVG 226
           HSSCGNVMDRI+ AY+KSSKQWS+T NKLAQVRQRGRKRTM+G
Sbjct: 121 HSSCGNVMDRILTAYRKSSKQWSATFNKLAQVRQRGRKRTMIG 163


>AT1G08120.1 | Symbols:  | LOCATED IN: cellular_component unknown;
          BEST Arabidopsis thaliana protein match is: ATP binding
          / catalytic/ protein kinase (TAIR:AT5G26110.1); Has 380
          Blast hits to 380 proteins in 166 species: Archae -
          115; Bacteria - 0; Metazoa - 110; Fungi - 39; Plants -
          20; Viruses - 0; Other Eukaryotes - 96 (source: NCBI
          BLink). | chr1:2538678-2538941 FORWARD
          Length = 87

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 1  MEINSDVKDGSLILIKQGAEARVYESTFVGRQSIVKERFSKKYRHPSLDSKLTLKRL 57
          M+   +V + SL+LIKQGAEARV ESTF GR+SIVKERFSKKYRHP LD+KLTLKRL
Sbjct: 5  MDCEENVGNESLVLIKQGAEARVLESTFSGRRSIVKERFSKKYRHPILDAKLTLKRL 61