Jatropha Genome Database

JcCA0316871.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316871.30 - phase: 0 
         (122 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29480.1 | Symbols:  | mitochondrial ATP synthase g subunit f...   220   1e-58
AT2G19680.2 | Symbols:  | mitochondrial ATP synthase g subunit f...   219   2e-58
AT2G19680.1 | Symbols:  | mitochondrial ATP synthase g subunit f...   219   2e-58
AT4G26210.2 | Symbols:  | mitochondrial ATP synthase g subunit f...   215   5e-57
AT4G26210.1 | Symbols:  | mitochondrial ATP synthase g subunit f...   215   5e-57

>AT4G29480.1 | Symbols:  | mitochondrial ATP synthase g subunit
           family protein | chr4:14486265-14487257 REVERSE
          Length = 122

 Score =  220 bits (561), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 103/122 (84%), Positives = 111/122 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL Q+QSKAC+ASKFVAKHGT+YY+QLLE+NKQYIQEPATVEKC  LSKQL YTRLA
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQLLYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP RYE+FWKE+DY KNLWKNR  LKVEDAGIAALFGLECF W+CAGEI GRGFT TGY
Sbjct: 61  SIPGRYETFWKEVDYAKNLWKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGY 120

Query: 121 YP 122
           YP
Sbjct: 121 YP 122


>AT2G19680.2 | Symbols:  | mitochondrial ATP synthase g subunit
           family protein | chr2:8501865-8502622 FORWARD
          Length = 122

 Score =  219 bits (559), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 110/122 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL QLQSKACQASKFVAKHG +YYKQLLEQNKQYIQEPAT+EKC+ LSKQL YTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP RYE+F KE+DY KNL KNR  LKVEDAGIAALFGLECF WFCAGEIVGRGFT TGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YP 122
           YP
Sbjct: 121 YP 122


>AT2G19680.1 | Symbols:  | mitochondrial ATP synthase g subunit
           family protein | chr2:8501865-8502622 FORWARD
          Length = 122

 Score =  219 bits (559), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/122 (86%), Positives = 110/122 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL QLQSKACQASKFVAKHG +YYKQLLEQNKQYIQEPAT+EKC+ LSKQL YTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP RYE+F KE+DY KNL KNR  LKVEDAGIAALFGLECF WFCAGEIVGRGFT TGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YP 122
           YP
Sbjct: 121 YP 122


>AT4G26210.2 | Symbols:  | mitochondrial ATP synthase g subunit
           family protein | chr4:13282370-13283118 FORWARD
          Length = 122

 Score =  215 bits (547), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 111/122 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL QL+SKAC+ASKFV+KHGT YYKQLL++NK YIQEPAT+EKCN LSKQL YTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP R ESFWKE+++VK LWKNR +LKVEDAGIAALFGLECF W+CAGEIVGRGFT TGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 YP 122
           YP
Sbjct: 121 YP 122


>AT4G26210.1 | Symbols:  | mitochondrial ATP synthase g subunit
           family protein | chr4:13282370-13283118 FORWARD
          Length = 122

 Score =  215 bits (547), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 111/122 (90%)

Query: 1   MASKLNQLQSKACQASKFVAKHGTAYYKQLLEQNKQYIQEPATVEKCNLLSKQLFYTRLA 60
           MASKL QL+SKAC+ASKFV+KHGT YYKQLL++NK YIQEPAT+EKCN LSKQL YTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SIPNRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFTWFCAGEIVGRGFTITGY 120
           SIP R ESFWKE+++VK LWKNR +LKVEDAGIAALFGLECF W+CAGEIVGRGFT TGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 YP 122
           YP
Sbjct: 121 YP 122